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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
62.9
nTPM
HPA Brain:
144.4
nTPM
GTEx:
62.9
nTPM
FANTOM5:
215.9
Scaled Tags Per Million
Pig:
49.9
nTPM
Mouse:
91.5
nTPM
Allen mouse:
3.0
Expression energy
AMYGDALA - HPA Brain RNA-seq
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
144.4
Sample id
Sample description
nTPM
Amygdala nTPM: 103.7
2695
Female, age 67, right hemisphere
118.1
2814
Male, age 76, right hemisphere
114.8
1987
Female, age 91, left hemisphere
97.6
2517
Female, age 94, left hemisphere
95.3
2514
Male, age 75, right hemisphere
92.9
Basal amygdala nTPM: 127.8
2827
Female, age 67, right hemisphere
189.9
2609
Male, age 75, right hemisphere
122.1
2243
Female, age 91, right hemisphere
118.4
1955
Male, age 76, both hemispheres
118.0
2685
Female, age 94, left hemisphere
110.9
2110
Male, age 80, left hemisphere
107.2
Central amygdala nTPM: 125.2
2826
Female, age 94, left hemisphere
186.9
1905
Male, age 76, both hemispheres
124.3
2239
Male, age 80, left hemisphere
112.7
2515
Male, age 75, right hemisphere
107.6
2701
Female, age 91, right hemisphere
94.6
Corticomedial amygdala nTPM: 105.6
2535
Female, age 67, right hemisphere
147.7
2829
Male, age 80, left hemisphere
106.0
2242
Female, age 91, right hemisphere
104.0
2428
Male, age 75, right hemisphere
95.7
2429
Female, age 94, left hemisphere
93.8
2240
Male, age 76, both hemispheres
86.8
Lateral amygdala nTPM: 144.4
2830
Female, age 67, right hemisphere
226.1
2534
Female, age 94, left hemisphere
162.7
2516
Male, age 75, right hemisphere
141.2
2256
Male, age 80, left hemisphere
123.0
1883
Male, age 76, both hemispheres
121.2
2255
Female, age 91, right hemisphere
92.0
AMYGDALA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
62.9
GTEx sample id
Sample description
nTPM
Brain - Amygdala Average nTPM: 62.9
Samples: 152
Max nTPM: 177.0
Min nTPM: 32.0
Std nTPM: 18.1
Median nTPM: 59.1
GTEX-13JVG-0011-R4a-SM-5MR4C
60-69 years, male
177.0
GTEX-1GZ4I-0011-R4a-SM-9QEI9
50-59 years, male
121.6
GTEX-13OVL-0011-R4b-SM-5L3HV
50-59 years, male
106.0
GTEX-1H1CY-0011-R4b-SM-CJI3G
60-69 years, female
103.7
GTEX-1HCU6-0011-R4b-SM-ARU74
60-69 years, female
103.0
GTEX-13OW6-0011-R4a-SM-5O9DX
50-59 years, male
101.2
GTEX-UTHO-0011-R4A-SM-3GIJP
60-69 years, male
97.2
GTEX-12ZZZ-0011-R4b-SM-5DUV7
60-69 years, male
96.4
GTEX-X4XX-0011-R4B-SM-46MWL
60-69 years, male
95.6
GTEX-ZE9C-0011-R4a-SM-4WKH6
60-69 years, male
95.3
GTEX-1C6VR-0011-R4b-SM-9QEGZ
60-69 years, male
89.7
GTEX-1GF9W-0011-R4a-SM-CE6RH
60-69 years, male
89.7
GTEX-13X6J-0011-R4b-SM-5P9K4
50-59 years, male
89.3
GTEX-131XH-0011-R4b-SM-5DUWB
50-59 years, male
89.1
GTEX-13112-0011-R4b-SM-5DUXL
50-59 years, male
86.4
GTEX-13O3Q-0011-R4a-SM-5P9H2
50-59 years, male
84.6
GTEX-13X6I-0011-R4b-SM-5PNU9
60-69 years, male
81.7
GTEX-1JJEA-0011-R4a-SM-EXUTC
60-69 years, male
81.5
GTEX-14PJM-0011-R4a-SM-5YYAS
50-59 years, female
79.7
GTEX-1E1VI-0011-R4b-SM-9QEHV
50-59 years, male
77.8
GTEX-17EVP-0011-R4a-SM-79OML
40-49 years, male
77.5
GTEX-N7MS-0011-R4a-SM-2HMKW
60-69 years, male
77.0
GTEX-ZAB4-0011-R4a-SM-4SOKB
40-49 years, male
76.3
GTEX-1313W-0011-R4b-SM-5KLZV
50-59 years, female
76.2
GTEX-1HFI6-0011-R4b-SM-A96RT
40-49 years, male
76.2
GTEX-1HBPH-0011-R4a-SM-A96RX
40-49 years, female
76.0
GTEX-13O3O-0011-R4b-SM-5KM3F
60-69 years, female
75.8
GTEX-WZTO-0011-R4A-SM-3NMC7
40-49 years, male
74.7
GTEX-1H2FU-0011-R4a-SM-CL551
60-69 years, female
74.4
GTEX-12ZZW-0011-R4a-SM-5DUX9
50-59 years, male
73.3
GTEX-1JMQJ-0011-R4b-SM-EXUT8
50-59 years, male
72.7
GTEX-1C6WA-0011-R4a-SM-9QEH2
60-69 years, male
72.0
GTEX-X585-0011-R4B-SM-46MVH
50-59 years, male
71.6
GTEX-1I1GR-0011-R4a-SM-CMKHC
60-69 years, male
71.6
GTEX-13NYS-0011-R4b-SM-5MR3O
60-69 years, male
71.2
GTEX-1GMR8-0011-R4a-SM-9OSX1
50-59 years, female
70.9
GTEX-ZAK1-0011-R4a-SM-6AJBK
50-59 years, female
70.8
GTEX-13NYB-0011-R4b-SM-9QEGJ
40-49 years, male
70.3
GTEX-145MI-0011-R4b-SM-5PNZH
60-69 years, female
70.2
GTEX-1F7RK-0011-R4b-SM-9QEI7
20-29 years, female
69.6
GTEX-17EVQ-0011-R4b-SM-7LT94
70-79 years, male
68.5
GTEX-1JN6P-0011-R4a-SM-EZ6MS
60-69 years, male
68.2
GTEX-14DAQ-0011-R4a-SM-5YYAI
60-69 years, female
67.9
GTEX-14ASI-0011-R4a-SM-69LQ4
60-69 years, male
67.7
GTEX-16YQH-0011-R4a-SM-7EPGI
30-39 years, male
67.5
GTEX-1J8EW-0011-R4b-SM-ARU89
60-69 years, female
67.2
GTEX-R55E-0011-R4A-SM-2TC5H
20-29 years, male
67.1
GTEX-15SHU-0011-R4b-SM-7IGLC
40-49 years, female
66.9
GTEX-1AX9I-0011-R4b-SM-7EPIB
60-69 years, male
66.4
GTEX-14JIY-0011-R4b-SM-5ZZV7
60-69 years, male
66.2
GTEX-1B8L1-0011-R4a-SM-7EWFJ
60-69 years, male
66.2
GTEX-144GL-0011-R4a-SM-5PNUI
50-59 years, male
65.9
GTEX-11PRG-0011-R4a-SM-DNZZR
50-59 years, male
65.9
GTEX-XLM4-0011-R4B-SM-4AT5C
60-69 years, male
65.8
GTEX-14JG1-0011-R4b-SM-62LEB
40-49 years, male
65.6
GTEX-WHSE-0011-R4A-SM-3P5ZN
20-29 years, male
65.6
GTEX-13OVH-0011-R4a-SM-5KM3W
70-79 years, male
65.5
GTEX-13VXU-0011-R4b-SM-5O9CI
50-59 years, male
64.1
GTEX-1LVAO-0011-R4a-SM-EXURO
60-69 years, male
64.0
GTEX-12WSA-0011-R4a-SM-57WB7
60-69 years, male
63.9
GTEX-1A3MX-0011-R4b-SM-7EWFK
60-69 years, male
63.7
GTEX-18464-0011-R4a-SM-7LG6T
50-59 years, male
62.9
GTEX-Y8DK-0011-R4A-SM-EXUR1
60-69 years, male
62.8
GTEX-1CB4G-0011-R4b-SM-CJI28
60-69 years, male
62.2
GTEX-12WSD-0011-R4b-SM-5LZUA
60-69 years, female
61.8
GTEX-1J8Q2-0011-R4a-SM-ADEHA
60-69 years, male
61.7
GTEX-15DDE-0011-R4b-SM-7KULI
50-59 years, female
61.4
GTEX-13SLX-0011-R4a-SM-5O9BJ
50-59 years, female
61.0
GTEX-1F75A-0011-R4a-SM-ARL8J
50-59 years, male
60.5
GTEX-Q2AG-0011-R4A-SM-2HMKA
40-49 years, female
60.3
GTEX-183WM-0011-R4a-SM-7LG6S
70-79 years, female
60.0
GTEX-P44G-0011-R4A-SM-2I3FB
30-39 years, male
59.9
GTEX-NPJ8-0011-R4a-SM-2HML3
40-49 years, male
59.6
GTEX-1F6IF-0011-R4b-SM-CKZNJ
60-69 years, male
59.6
GTEX-OHPN-0011-R4A-SM-2I5FD
60-69 years, female
59.4
GTEX-13N1W-0011-R4a-SM-5MR52
70-79 years, male
59.1
GTEX-WVLH-0011-R4A-SM-3MJFS
50-59 years, male
59.1
GTEX-1GTWX-0011-R4a-SM-C1YQI
60-69 years, male
58.7
GTEX-11NUK-0011-R4a-SM-DO12B
50-59 years, male
58.6
GTEX-NPJ7-0011-R4a-SM-2I3GJ
60-69 years, female
58.5
GTEX-1F48J-0011-R4b-SM-9OSVX
50-59 years, female
58.5
GTEX-15ER7-0011-R4a-SM-6M46S
20-29 years, female
57.8
GTEX-139T8-0011-R4a-SM-5HL54
60-69 years, male
57.7
GTEX-15EO6-0011-R4a-SM-7KUKZ
50-59 years, male
57.6
GTEX-1GN73-0011-R4b-SM-9QEIK
60-69 years, male
57.6
GTEX-13FLV-0011-R4a-SM-5LZYU
50-59 years, male
57.5
GTEX-14ABY-0011-R4b-SM-5S2VN
50-59 years, male
57.5
GTEX-1IY9M-0011-R4a-SM-C1YQ2
60-69 years, male
57.1
GTEX-1B996-0011-R4b-SM-9OSVO
60-69 years, male
56.7
GTEX-NL3H-0011-R4a-SM-2I3GK
60-69 years, male
56.6
GTEX-QMR6-0011-R4A-SM-32PKU
50-59 years, male
56.5
GTEX-15DYW-0011-R4a-SM-6M46V
60-69 years, female
56.1
GTEX-YFC4-0011-R4a-SM-4RGLQ
40-49 years, female
56.1
GTEX-1H1DG-0011-R4a-SM-CE6RQ
70-79 years, male
56.1
GTEX-RNOR-0011-R4A-SM-3GAD3
50-59 years, female
55.9
GTEX-1LSVX-0011-R4b-SM-EXURP
60-69 years, male
55.5
GTEX-1H23P-0011-R4b-SM-CL54R
60-69 years, male
55.4
GTEX-13OW7-0011-R4b-SM-5O9CX
50-59 years, male
55.3
GTEX-13X6K-0011-R4b-SM-5P9HO
60-69 years, female
55.1
GTEX-1EX96-0011-R4a-SM-ARU82
50-59 years, male
55.1
GTEX-1399T-0011-R4b-SM-5DUVX
60-69 years, male
55.0
GTEX-1J1OQ-0011-R4a-SM-D4P2A
40-49 years, female
54.7
GTEX-12WSH-0011-R4a-SM-5GU6K
50-59 years, male
54.5
GTEX-13PVQ-0011-R4a-SM-5O9CT
50-59 years, male
54.3
GTEX-1HBPI-0011-R4a-SM-CJI3K
50-59 years, male
53.8
GTEX-12WSF-0011-R4b-SM-5HL88
70-79 years, male
53.7
GTEX-S7SE-0011-R4A-SM-2XCDB
50-59 years, male
53.7
GTEX-1ICLZ-0011-R4a-SM-CMKHL
60-69 years, male
53.4
GTEX-11ZU8-0011-R4a-SM-5BC6Y
60-69 years, male
53.3
GTEX-1EMGI-0011-R4b-SM-CJI2D
60-69 years, male
53.3
GTEX-QVJO-0011-R4A-SM-2S1QL
60-69 years, female
52.7
GTEX-13CZV-0011-R4b-SM-5J2NY
60-69 years, male
52.6
GTEX-1N2EE-0011-R4a-SM-EXOII
60-69 years, male
52.4
GTEX-NL4W-0011-R4a-SM-2I5GZ
50-59 years, male
52.3
GTEX-1N2DW-0011-R4b-SM-EZ6MD
50-59 years, male
52.1
GTEX-14PQA-0011-R4b-SM-6AJBU
50-59 years, female
51.8
GTEX-11ONC-0011-R4b-SM-DO93H
60-69 years, male
51.8
GTEX-T5JC-0011-R4A-SM-32PLT
20-29 years, male
51.7
GTEX-131YS-0011-R4a-SM-5DUVL
60-69 years, female
51.5
GTEX-1H3NZ-0011-R4a-SM-CL54T
60-69 years, male
50.8
GTEX-ZVZQ-0011-R4b-SM-57WCZ
60-69 years, female
50.5
GTEX-17F97-0011-R4b-SM-7KFS2
50-59 years, male
50.3
GTEX-13N2G-0011-R4b-SM-5MR54
60-69 years, male
50.1
GTEX-13OW8-0011-R4a-SM-9WG6V
60-69 years, male
50.0
GTEX-17HG3-0011-R4a-SM-7IGLL
30-39 years, female
49.5
GTEX-N7MT-0011-R4a-SM-2I3G9
60-69 years, female
49.5
GTEX-1CB4J-0011-R4b-SM-9WG5P
60-69 years, male
49.5
GTEX-14E7W-0011-R4b-SM-62LEA
70-79 years, male
48.2
GTEX-145LS-0011-R4b-SM-5S2UT
60-69 years, female
47.6
GTEX-13OW5-0011-R4b-SM-5L3HS
60-69 years, male
46.7
GTEX-QVUS-0011-R4A-SM-3GAE7
60-69 years, female
46.7
GTEX-1445S-0011-R4a-SM-5PNWN
60-69 years, male
46.3
GTEX-13SLW-0011-R4b-SM-5S2W2
70-79 years, male
45.9
GTEX-14PN4-0011-R4a-SM-686ZT
50-59 years, male
45.7
GTEX-14BIM-0011-R4b-SM-5S2RK
60-69 years, female
45.4
GTEX-1H3O1-0011-R4b-SM-A9SKE
60-69 years, male
45.4
GTEX-P44H-0011-R4A-SM-2XCEW
40-49 years, male
45.2
GTEX-TSE9-0011-R4A-SM-3DB7H
60-69 years, female
44.2
GTEX-11TTK-0011-R4a-SM-DNZZU
60-69 years, female
44.1
GTEX-15DCD-0011-R4a-SM-69LPB
70-79 years, female
42.9
GTEX-13RTJ-0011-R4b-SM-5PNX1
60-69 years, male
42.8
GTEX-14JFF-0011-R4a-SM-5ZZV5
60-69 years, male
42.6
GTEX-13OVJ-0011-R4b-SM-5P9H5
50-59 years, female
42.4
GTEX-15CHQ-0011-R4a-SM-686ZX
60-69 years, male
40.9
GTEX-1H1ZS-0011-R4b-SM-CKZO7
70-79 years, male
40.8
GTEX-QDT8-0011-R4A-SM-32PKM
30-39 years, female
39.4
GTEX-1HB9E-0011-R4b-SM-ARZLS
50-59 years, male
39.4
GTEX-147GR-0011-R4a-SM-5S2V2
60-69 years, male
38.9
GTEX-11ZVC-0011-R4a-SM-5BC6Z
50-59 years, female
37.9
GTEX-13QIC-0011-R4a-SM-5PNX8
60-69 years, female
37.5
GTEX-X4EP-0011-R4B-SM-3P627
60-69 years, female
33.8
GTEX-T6MN-0011-R4A-SM-32QPG
50-59 years, male
32.0
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AMYGDALA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
91.5
Mouse sample
Sample description
nTPM
Amygdala nTPM: 91.5
Samples: 4
Max nTPM: 95.3
Min nTPM: 84.0
Sample A
Male
91.9
Sample B
Male
94.7
Sample C
Female
95.3
Sample D
Female
84.0
AMYGDALA - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
Max subtype Expression energyi
Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.
The Human Protein Atlas project is funded
