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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
FASTK is not prognostic in Liver Hepatocellular Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
37.4
Number of samples
362
Samples
Sample
Description
TPM
TCGA-DD-AAE6-01A
0 years, female, asian, stage:Stage I, alive, 141 days
122.8
TCGA-RC-A7SH-01A
0 years, male, asian, stage:Stage II, alive, 468 days
112.6
TCGA-BC-A5W4-01A
0 years, male, white, stage:Stage IIIA, dead, 547 days
107.4
TCGA-UB-A7MD-01A
0 years, male, black or african american, stage:Stage I, dead, 52 days
94.0
TCGA-BC-A10Q-01A
0 years, female, white, stage:'--, dead, 1135 days
92.1
TCGA-CC-5260-01A
0 years, female, asian, stage:Stage IIIC, dead, 87 days
91.0
TCGA-DD-A73E-01A
0 years, male, white, stage:Stage I, alive, 44 days
87.7
TCGA-5C-AAPD-01A
0 years, male, asian, stage:Stage II, alive, 20 days
82.7
TCGA-DD-A3A6-01A
0 years, female, white, stage:Stage II, dead, 3258 days
80.9
TCGA-DD-AAE9-01A
0 years, male, asian, stage:Stage I, alive, 722 days
78.8
TCGA-DD-AAEA-01A
0 years, male, asian, stage:Stage I, alive, 575 days
77.2
TCGA-DD-AACH-01A
0 years, male, asian, stage:Stage II, dead, 195 days
76.7
TCGA-G3-AAV5-01A
0 years, male, white, stage:Stage II, alive, 354 days
74.5
TCGA-DD-A4NA-01A
0 years, female, white, stage:Stage IIIC, alive, 1008 days
74.4
TCGA-FV-A2QR-01A
0 years, male, white, stage:Stage I, dead, 581 days
72.1
TCGA-G3-A25T-01A
0 years, female, white, stage:Stage IIIA, alive, 1553 days
71.8
TCGA-CC-5263-01A
0 years, male, asian, stage:Stage IIIA, dead, 129 days
71.2
TCGA-DD-A39Z-01A
0 years, female, stage:Stage II, dead, 601 days
70.3
TCGA-FV-A3R2-01A
0 years, male, white, stage:Stage I, dead, 194 days
70.3
TCGA-WQ-A9G7-01A
0 years, female, white, stage:'--, alive, 30 days
67.9
TCGA-CC-5264-01A
0 years, male, asian, stage:Stage IIIA, dead, 102 days
65.8
TCGA-G3-A25X-01A
0 years, male, asian, stage:Stage II, alive, 1779 days
65.8
TCGA-DD-A116-01A
0 years, male, asian, stage:Stage IIIA, dead, 1622 days
65.5
TCGA-ED-A7PZ-01A
0 years, male, asian, stage:Stage II, alive, 6 days
64.3
TCGA-G3-A3CJ-01A
0 years, male, american indian or alaska native, stage:Stage II, alive, 594 days
62.7
TCGA-DD-AADM-01A
0 years, male, asian, stage:Stage II, dead, 12 days
61.5
TCGA-DD-AADG-01A
0 years, male, asian, stage:Stage IIIA, alive, 1145 days
61.4
TCGA-KR-A7K8-01A
0 years, male, stage:Stage I, alive, 906 days
61.0
TCGA-BC-A69H-01A
0 years, male, white, stage:Stage II, alive, 444 days
60.7
TCGA-EP-A26S-01A
0 years, male, white, stage:Stage I, alive, 608 days
60.5
TCGA-2Y-A9GS-01A
0 years, male, white, stage:'--, dead, 724 days
59.0
TCGA-DD-A3A5-01A
0 years, female, white, stage:Stage III, dead, 3125 days
57.9
TCGA-DD-A73G-01A
0 years, female, white, stage:Stage I, alive, 3478 days
57.8
TCGA-DD-AACU-01A
0 years, male, asian, stage:Stage I, alive, 1567 days
57.7
TCGA-4R-AA8I-01A
0 years, male, white, stage:Stage II, dead, 262 days
57.5
TCGA-MI-A75G-01A
0 years, male, white, stage:Stage II, alive, 698 days
57.2
TCGA-DD-A4NN-01A
0 years, female, white, stage:Stage I, dead, 899 days
56.5
TCGA-DD-A4NV-01A
0 years, male, white, stage:Stage IIIA, alive, 2398 days
56.1
TCGA-FV-A2QQ-01A
0 years, male, white, stage:Stage I, alive, 729 days
55.6
TCGA-CC-A8HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 140 days
55.1
TCGA-DD-A3A7-01A
0 years, male, stage:Stage IIIB, dead, 419 days
54.9
TCGA-DD-A1EC-01A
0 years, female, white, stage:Stage I, alive, 602 days
54.9
TCGA-BC-A10R-01A
0 years, female, white, stage:'--, dead, 308 days
54.1
TCGA-DD-AACA-01A
0 years, male, asian, stage:Stage I, alive, 2301 days
53.7
TCGA-DD-AAVP-01A
0 years, male, asian, stage:Stage I, alive, 2752 days
53.3
TCGA-G3-A25Y-01A
0 years, female, asian, stage:Stage I, dead, 452 days
53.1
TCGA-BC-A10Y-01A
0 years, male, white, stage:'--, dead, 711 days
52.9
TCGA-DD-A4NQ-01A
0 years, male, white, stage:Stage II, dead, 373 days
52.8
TCGA-DD-AADW-01A
0 years, male, asian, stage:Stage I, alive, 587 days
52.4
TCGA-ED-A459-01A
0 years, male, asian, stage:Stage II, alive, 910 days
51.7
TCGA-G3-AAV6-01A
0 years, female, white, stage:Stage IIIA, dead, 65 days
51.5
TCGA-ZP-A9D1-01A
0 years, female, white, stage:'--, alive, 21 days
51.5
TCGA-DD-A1EE-01A
0 years, male, white, stage:Stage IIIA, dead, 349 days
51.3
TCGA-T1-A6J8-01A
0 years, male, white, stage:'--, alive, 23 days
51.2
TCGA-DD-A1EB-01A
0 years, female, stage:Stage I, alive, 2017 days
50.2
TCGA-5C-A9VH-01A
0 years, male, white, stage:Stage I, alive, 322 days
50.2
TCGA-CC-A7IJ-01A
0 years, male, asian, stage:Stage II, alive, 382 days
50.2
TCGA-DD-AADL-01A
0 years, male, asian, stage:Stage I, alive, 636 days
50.2
TCGA-G3-AAV7-01A
0 years, male, asian, stage:Stage II, alive, 361 days
50.0
TCGA-DD-A39Y-01A
0 years, male, asian, stage:Stage I, dead, 171 days
49.8
TCGA-EP-A3RK-01A
0 years, male, white, stage:Stage IIIA, alive, 363 days
49.8
TCGA-ED-A7XO-01A
0 years, male, asian, stage:Stage IIIA, alive, 427 days
49.7
TCGA-DD-AADJ-01A
0 years, female, asian, stage:Stage I, alive, 1066 days
49.6
TCGA-CC-A3MA-01A
0 years, male, asian, stage:Stage IIIA, dead, 303 days
49.6
TCGA-DD-A73C-01A
0 years, female, white, stage:Stage IIIA, alive, 701 days
49.4
TCGA-DD-AAW3-01A
0 years, male, asian, stage:Stage I, alive, 1633 days
48.9
TCGA-DD-AACT-01A
0 years, female, asian, stage:Stage I, alive, 1562 days
48.7
TCGA-G3-A3CG-01A
0 years, male, white, stage:Stage I, alive, 673 days
48.6
TCGA-CC-A9FW-01A
0 years, male, asian, stage:Stage IIIA, alive, 248 days
48.5
TCGA-DD-AAVS-01A
0 years, male, asian, stage:Stage I, alive, 1823 days
48.5
TCGA-DD-A1EJ-01A
0 years, female, white, stage:Stage IIIC, dead, 1005 days
48.3
TCGA-DD-AADV-01A
0 years, male, asian, stage:Stage I, alive, 574 days
48.1
TCGA-BC-A10U-01A
0 years, male, white, stage:'--, dead, 837 days
48.1
TCGA-FV-A3I1-01A
0 years, female, white, stage:Stage II, dead, 247 days
48.0
TCGA-DD-AACS-01A
0 years, male, asian, stage:Stage I, alive, 1804 days
47.9
TCGA-DD-AACW-01A
0 years, male, asian, stage:Stage I, alive, 1424 days
47.8
TCGA-G3-A5SM-01A
0 years, male, white, stage:Stage II, alive, 520 days
47.8
TCGA-DD-A39V-01A
0 years, male, white, stage:Stage II, dead, 643 days
47.6
TCGA-RC-A7SB-01A
0 years, male, asian, stage:Stage II, alive, 588 days
47.0
TCGA-DD-AA3A-01A
0 years, female, white, stage:Stage I, dead, 410 days
46.6
TCGA-DD-AACQ-01A
0 years, male, asian, stage:Stage II, dead, 432 days
46.5
TCGA-RC-A6M6-01A
0 years, male, white, stage:Stage II, alive, 9 days
46.4
TCGA-EP-A2KC-01A
0 years, male, black or african american, stage:Stage I, dead, 19 days
46.3
TCGA-FV-A4ZQ-01A
0 years, male, white, stage:Stage I, alive, 12 days
46.2
TCGA-DD-A39W-01A
0 years, female, white, stage:Stage III, dead, 827 days
46.1
TCGA-DD-AAE0-01A
0 years, female, asian, stage:Stage IIIA, alive, 555 days
45.5
TCGA-5C-A9VG-01A
0 years, male, white, stage:Stage II, alive, 328 days
45.5
TCGA-G3-AAV2-01A
0 years, male, white, stage:Stage I, alive, 372 days
45.4
TCGA-LG-A9QC-01A
0 years, male, white, stage:Stage I, alive, 425 days
45.2
TCGA-YA-A8S7-01A
0 years, male, white, stage:Stage IIIA, dead, 412 days
45.2
TCGA-PD-A5DF-01A
0 years, female, white, stage:Stage IIIB, dead, 639 days
45.0
TCGA-CC-A7IH-01A
0 years, male, asian, stage:Stage IIIA, alive, 365 days
44.9
TCGA-G3-A7M9-01A
0 years, male, white, stage:Stage IIIB, dead, 56 days
44.8
TCGA-FV-A4ZP-01A
0 years, male, white, stage:Stage IIIA, dead, 2486 days
44.8
TCGA-DD-AADI-01A
0 years, female, asian, stage:Stage I, alive, 1085 days
44.3
TCGA-CC-A3MB-01A
0 years, male, asian, stage:Stage IIIA, dead, 315 days
44.3
TCGA-DD-AAD8-01A
0 years, female, asian, stage:Stage I, alive, 1219 days
44.3
TCGA-2Y-A9H9-01A
0 years, male, white, stage:Stage I, alive, 697 days
44.1
TCGA-BC-A8YO-01A
0 years, female, white, stage:Stage IIIC, alive, 562 days
43.9
TCGA-DD-A3A2-01A
0 years, female, white, stage:Stage I, dead, 2131 days
43.8
TCGA-CC-5262-01A
0 years, male, asian, stage:Stage IIIC, dead, 103 days
43.3
TCGA-DD-A11D-01A
0 years, female, white, stage:Stage I, dead, 1560 days
43.3
TCGA-GJ-A6C0-01A
0 years, female, white, stage:Stage II, dead, 31 days
43.2
TCGA-DD-AAEE-01A
0 years, male, asian, stage:Stage I, alive, 810 days
43.2
TCGA-WJ-A86L-01A
0 years, female, white, stage:Stage I, alive, 345 days
43.0
TCGA-ZP-A9D2-01A
0 years, male, white, stage:'--, dead, 765 days
42.9
TCGA-CC-A7IK-01A
0 years, male, asian, stage:Stage IIIA, dead, 262 days
42.7
TCGA-ED-A66Y-01A
0 years, female, asian, stage:Stage IIIA, dead, 296 days
42.6
TCGA-WX-AA44-01A
0 years, female, white, stage:Stage I, alive, 615 days
42.4
TCGA-DD-A4NK-01A
0 years, female, white, stage:Stage IIIA, dead, 1210 days
42.3
TCGA-EP-A2KA-01A
0 years, female, white, stage:Stage IIIA, dead, 627 days
42.3
TCGA-DD-AAC8-01A
0 years, male, asian, stage:Stage I, dead, 16 days
42.1
TCGA-DD-A114-01A
0 years, male, black or african american, stage:Stage II, dead, 1149 days
42.0
TCGA-DD-AAEG-01A
0 years, female, asian, stage:Stage I, alive, 719 days
42.0
TCGA-DD-AAE1-01A
0 years, male, asian, stage:Stage I, alive, 552 days
42.0
TCGA-DD-AACE-01A
0 years, male, asian, stage:Stage I, alive, 2184 days
41.7
TCGA-G3-A25Z-01A
0 years, male, asian, stage:Stage I, alive, 655 days
41.7
TCGA-GJ-A9DB-01A
0 years, male, white, stage:Stage I, dead, 67 days
41.7
TCGA-XR-A8TE-01A
0 years, male, white, stage:Stage IIIA, alive, 925 days
41.6
TCGA-DD-AAVQ-01A
0 years, male, asian, stage:Stage I, alive, 2728 days
41.6
TCGA-CC-A5UD-01A
0 years, male, asian, stage:Stage IIIA, dead, 304 days
41.3
TCGA-DD-AACJ-01A
0 years, male, asian, stage:Stage II, alive, 2102 days
41.2
TCGA-MI-A75H-01A
0 years, male, white, stage:'--, alive, 747 days
41.1
TCGA-UB-A7ME-01A
0 years, male, asian, stage:Stage I, alive, 486 days
40.8
TCGA-G3-AAV4-01A
0 years, female, white, stage:Stage I, dead, 27 days
40.8
TCGA-DD-A1EK-01A
0 years, female, white, stage:Stage IVB, dead, 558 days
40.8
TCGA-DD-AAVU-01A
0 years, male, asian, stage:Stage II, alive, 2202 days
40.5
TCGA-MI-A75E-01A
0 years, male, white, stage:Stage IIIC, alive, 507 days
40.4
TCGA-DD-A1EI-01A
0 years, male, asian, stage:Stage I, alive, 183 days
40.3
TCGA-3K-AAZ8-01A
0 years, male, black or african american, stage:Stage IIIB, alive, 396 days
40.2
TCGA-2Y-A9H8-01A
0 years, female, white, stage:'--, dead, 633 days
40.2
TCGA-DD-A3A9-01A
0 years, female, white, stage:Stage IVB, dead, 931 days
40.1
TCGA-RC-A6M4-01A
0 years, female, white, stage:Stage IIIA, alive, 22 days
40.1
TCGA-DD-AAD0-01A
0 years, female, asian, stage:Stage I, alive, 137 days
40.0
TCGA-ZS-A9CE-01A
0 years, female, white, stage:Stage II, alive, 1241 days
39.9
TCGA-2Y-A9HA-01A
0 years, male, white, stage:Stage II, dead, 36 days
39.9
TCGA-UB-A7MB-01A
0 years, male, white, stage:Stage II, alive, 601 days
39.7
TCGA-MI-A75I-01A
0 years, male, black or african american, stage:'--, alive, 630 days
39.4
TCGA-ED-A82E-01A
0 years, female, asian, stage:Stage IIIA, alive, 408 days
39.4
TCGA-DD-A1EH-01A
0 years, male, white, stage:Stage III, alive, 1495 days
39.2
TCGA-DD-A3A8-01A
0 years, male, white, stage:Stage II, dead, 11 days
39.2
TCGA-BC-A216-01A
0 years, female, white, stage:Stage IIIA, alive, 1351 days
38.9
TCGA-DD-AAD5-01A
0 years, male, asian, stage:Stage I, alive, 1345 days
38.6
TCGA-DD-A1EG-01A
0 years, male, white, stage:Stage I, dead, 1372 days
38.6
TCGA-2Y-A9H7-01A
0 years, female, white, stage:Stage I, alive, 1168 days
38.5
TCGA-BD-A3EP-01A
0 years, female, black or african american, stage:Stage I, alive, 409 days
38.5
TCGA-G3-A25V-01A
0 years, male, white, stage:Stage I, alive, 860 days
38.3
TCGA-ZP-A9D4-01A
0 years, female, white, stage:'--, alive, 395 days
38.1
TCGA-DD-AAEI-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
38.1
TCGA-RC-A7SK-01A
0 years, male, asian, stage:Stage I, alive, 472 days
37.8
TCGA-BD-A2L6-01A
0 years, male, white, stage:'--, alive, 1363 days
37.7
TCGA-DD-A3A3-01A
0 years, male, asian, stage:Stage I, dead, 535 days
37.4
TCGA-FV-A3I0-01A
0 years, female, white, stage:Stage II, alive, 848 days
37.3
TCGA-2Y-A9GY-01A
0 years, female, white, stage:Stage II, dead, 757 days
37.1
TCGA-G3-A3CK-01A
0 years, male, asian, stage:Stage I, alive, 585 days
36.8
TCGA-CC-A5UE-01A
0 years, male, asian, stage:Stage IIIB, dead, 272 days
36.8
TCGA-FV-A495-01A
0 years, female, white, stage:Stage II, alive, 1 days
36.3
TCGA-DD-AAW2-01A
0 years, male, asian, stage:Stage I, alive, 1855 days
36.3
TCGA-CC-A7IL-01A
0 years, male, asian, stage:Stage IIIA, dead, 278 days
36.2
TCGA-UB-AA0U-01A
0 years, male, white, stage:Stage II, alive, 327 days
36.2
TCGA-ED-A7XP-01A
0 years, female, asian, stage:Stage II, alive, 400 days
36.2
TCGA-DD-AADK-01A
0 years, female, asian, stage:Stage II, alive, 1049 days
36.1
TCGA-DD-AACX-01A
0 years, male, asian, stage:Stage II, alive, 170 days
36.1
TCGA-DD-AAED-01A
0 years, male, asian, stage:Stage I, alive, 763 days
35.9
TCGA-DD-A119-01A
0 years, male, asian, stage:Stage IV, dead, 223 days
35.7
TCGA-DD-AACL-01A
0 years, female, asian, stage:Stage I, dead, 107 days
35.7
TCGA-G3-AAV3-01A
0 years, female, white, stage:Stage II, alive, 412 days
35.5
TCGA-ZS-A9CG-01A
0 years, male, white, stage:Stage II, alive, 341 days
35.5
TCGA-BW-A5NO-01A
0 years, male, black or african american, stage:Stage IIIA, alive, 20 days
35.2
TCGA-KR-A7K0-01A
0 years, male, white, stage:Stage I, dead, 65 days
35.2
TCGA-DD-A1EA-01A
0 years, male, asian, stage:Stage II, alive, 2415 days
35.1
TCGA-DD-AACP-01A
0 years, male, asian, stage:Stage I, alive, 415 days
35.1
TCGA-2Y-A9H6-01A
0 years, female, white, stage:Stage I, alive, 357 days
35.0
TCGA-CC-A3M9-01A
0 years, male, asian, stage:Stage IIIA, dead, 300 days
34.7
TCGA-ED-A66X-01A
0 years, male, asian, stage:Stage IIIA, alive, 406 days
34.7
TCGA-CC-A3MC-01A
0 years, male, asian, stage:Stage IIIA, alive, 363 days
34.5
TCGA-GJ-A3OU-01A
0 years, male, white, stage:Stage I, alive, 879 days
34.5
TCGA-ES-A2HT-01A
0 years, male, black or african american, stage:Stage I, dead, 438 days
34.4
TCGA-DD-AAD1-01A
0 years, female, asian, stage:Stage I, alive, 564 days
34.4
TCGA-DD-A118-01A
0 years, female, white, stage:Stage II, alive, 3437 days
34.4
TCGA-2Y-A9H2-01A
0 years, female, white, stage:Stage I, alive, 1731 days
34.2
TCGA-DD-A73F-01A
0 years, female, white, stage:Stage I, alive, 1085 days
34.2
TCGA-G3-A7M6-01A
0 years, female, white, stage:Stage I, alive, 632 days
34.2
TCGA-DD-AAE2-01A
0 years, male, asian, stage:Stage I, alive, 638 days
34.2
TCGA-DD-A4NS-01A
0 years, female, white, stage:Stage I, dead, 2456 days
34.2
TCGA-G3-A3CH-01A
0 years, male, asian, stage:Stage IIIA, alive, 780 days
34.1
TCGA-DD-AACF-01A
0 years, male, asian, stage:Stage I, dead, 365 days
34.1
TCGA-MI-A75C-01A
0 years, male, white, stage:Stage I, alive, 291 days
34.0
TCGA-K7-A6G5-01A
0 years, male, white, stage:Stage I, alive, 512 days
33.9
TCGA-DD-AADU-01A
0 years, male, asian, stage:Stage II, alive, 554 days
33.9
TCGA-DD-AADB-01A
0 years, male, asian, stage:Stage I, alive, 1242 days
33.8
TCGA-G3-A25S-01A
0 years, male, white, stage:Stage I, dead, 416 days
33.6
TCGA-FV-A23B-01A
0 years, female, white, stage:Stage II, dead, 1852 days
33.5
TCGA-2Y-A9H1-01A
0 years, male, white, stage:Stage I, dead, 1229 days
33.4
TCGA-ZS-A9CD-01A
0 years, male, white, stage:Stage II, dead, 1386 days
33.4
TCGA-2Y-A9GU-01A
0 years, female, white, stage:Stage I, alive, 1939 days
33.4
TCGA-XR-A8TD-01A
0 years, female, white, stage:Stage IIIB, alive, 1030 days
33.4
TCGA-G3-A6UC-01A
0 years, male, white, stage:Stage IIIB, alive, 671 days
33.3
TCGA-DD-AACN-01A
0 years, male, asian, stage:Stage I, alive, 1302 days
33.3
TCGA-2Y-A9H4-01A
0 years, male, black or african american, stage:Stage I, alive, 1452 days
33.3
TCGA-G3-A7M5-01A
0 years, male, asian, stage:Stage I, alive, 447 days
33.2
TCGA-DD-A4NR-01A
0 years, female, white, stage:Stage I, dead, 9 days
33.2
TCGA-NI-A4U2-01A
0 years, male, white, stage:Stage IIIA, dead, 1791 days
33.2
TCGA-BC-A112-01A
0 years, male, white, stage:'--, dead, 153 days
33.1
TCGA-DD-A11C-01A
0 years, male, white, stage:Stage I, alive, 662 days
33.1
TCGA-XR-A8TG-01A
0 years, male, white, stage:Stage I, alive, 898 days
33.0
TCGA-BC-A10T-01A
0 years, male, white, stage:'--, dead, 837 days
32.9
TCGA-HP-A5N0-01A
0 years, female, stage:'--, dead, 752 days
32.8
TCGA-G3-A5SL-01A
0 years, male, white, stage:Stage II, alive, 621 days
32.8
TCGA-DD-A115-01A
0 years, male, white, stage:Stage IIIA, dead, 2542 days
32.6
TCGA-DD-A4NF-01A
0 years, male, white, stage:Stage I, alive, 942 days
32.5
TCGA-5R-AA1C-01A
0 years, male, white, stage:Stage II, alive, 520 days
32.3
TCGA-DD-AACG-01A
0 years, male, asian, stage:Stage II, dead, 469 days
32.3
TCGA-EP-A3JL-01A
0 years, male, white, stage:Stage I, alive, 303 days
32.3
TCGA-2Y-A9H5-01A
0 years, female, white, stage:Stage I, dead, 555 days
32.2
TCGA-2Y-A9H3-01A
0 years, male, white, stage:Stage II, alive, 1516 days
32.1
TCGA-KR-A7K7-01A
0 years, female, white, stage:Stage II, alive, 951 days
31.9
TCGA-DD-A4NP-01A
0 years, male, white, stage:Stage I, alive, 3308 days
31.7
TCGA-BC-A3KG-01A
0 years, female, white, stage:Stage II, alive, 680 days
31.6
TCGA-DD-AAVV-01A
0 years, male, asian, stage:Stage II, alive, 2455 days
31.5
TCGA-G3-AAUZ-01A
0 years, male, stage:Stage I, alive, 480 days
31.2
TCGA-ES-A2HS-01A
0 years, male, white, stage:Stage I, dead, 688 days
31.2
TCGA-DD-A4NI-01A
0 years, male, white, stage:Stage II, alive, 816 days
31.2
TCGA-BC-A3KF-01A
0 years, female, white, stage:Stage I, alive, 8 days
30.8
TCGA-LG-A6GG-01A
0 years, female, white, stage:Stage II, alive, 387 days
30.6
TCGA-DD-AACC-01A
0 years, male, asian, stage:Stage I, dead, 1685 days
30.6
TCGA-G3-A7M7-01A
0 years, male, white, stage:Stage I, alive, 361 days
30.6
TCGA-DD-A4NO-01A
0 years, male, white, stage:Stage I, alive, 2245 days
30.6
TCGA-ED-A8O6-01A
0 years, female, asian, stage:Stage IIIA, dead, 56 days
30.6
TCGA-RC-A6M5-01A
0 years, female, white, stage:Stage IVA, alive, 15 days
30.4
TCGA-2Y-A9GW-01A
0 years, male, white, stage:Stage I, dead, 1271 days
30.4
TCGA-DD-AACK-01A
0 years, male, asian, stage:Stage I, alive, 9 days
30.3
TCGA-G3-AAV0-01A
0 years, male, asian, stage:Stage I, alive, 476 days
30.1
TCGA-DD-AADC-01A
0 years, male, asian, stage:Stage I, dead, 425 days
29.8
TCGA-ZP-A9CZ-01A
0 years, male, asian, stage:'--, alive, 706 days
29.8
TCGA-DD-A11B-01A
0 years, male, white, stage:Stage I, dead, 14 days
29.7
TCGA-DD-AAVY-01A
0 years, male, asian, stage:Stage IIIA, alive, 1970 days
29.6
TCGA-DD-AAEB-01A
0 years, male, asian, stage:Stage I, alive, 478 days
29.4
TCGA-O8-A75V-01A
0 years, male, stage:Stage I, alive, 538 days
29.4
TCGA-ZP-A9CV-01A
0 years, male, white, stage:'--, dead, 1088 days
29.3
TCGA-K7-A5RF-01A
0 years, male, white, stage:Stage I, alive, 631 days
29.3
TCGA-BC-A69I-01A
0 years, male, white, stage:Stage I, alive, 387 days
29.3
TCGA-CC-A1HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 101 days
29.3
TCGA-DD-AACD-01A
0 years, male, asian, stage:Stage I, dead, 381 days
29.1
TCGA-DD-A113-01A
0 years, female, white, stage:Stage II, alive, 2425 days
29.0
TCGA-BD-A3ER-01A
0 years, male, white, stage:Stage II, alive, 1115 days
28.9
TCGA-G3-A5SJ-01A
0 years, male, white, stage:Stage I, alive, 698 days
28.9
TCGA-DD-AACV-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
28.8
TCGA-CC-A7II-01A
0 years, male, asian, stage:Stage IIIA, alive, 399 days
28.6
TCGA-DD-AADY-01A
0 years, female, asian, stage:Stage I, alive, 555 days
28.5
TCGA-BC-A10S-01A
0 years, male, white, stage:'--, dead, 1423 days
28.4
TCGA-DD-A3A1-01A
0 years, male, stage:Stage IIIA, dead, 233 days
28.4
TCGA-KR-A7K2-01A
0 years, male, white, stage:Stage I, alive, 829 days
28.3
TCGA-DD-AADS-01A
0 years, male, asian, stage:Stage I, alive, 474 days
28.3
TCGA-XR-A8TF-01A
0 years, male, white, stage:Stage I, dead, 693 days
28.3
TCGA-DD-AAD3-01A
0 years, male, asian, stage:Stage I, alive, 1295 days
28.3
TCGA-DD-A1EF-01A
0 years, female, white, stage:Stage I, dead, 394 days
28.1
TCGA-DD-AAE3-01A
0 years, male, asian, stage:Stage I, alive, 566 days
28.0
TCGA-BC-A10Z-01A
0 years, female, white, stage:Stage I, dead, 34 days
27.8
TCGA-DD-A4NJ-01A
0 years, female, white, stage:Stage II, alive, 928 days
27.8
TCGA-DD-AADD-01A
0 years, male, asian, stage:Stage I, alive, 1231 days
27.7
TCGA-DD-AAW1-01A
0 years, male, asian, stage:Stage IIIA, alive, 1989 days
27.4
TCGA-2Y-A9HB-01A
0 years, male, stage:Stage I, alive, 260 days
27.2
TCGA-DD-A73D-01A
0 years, female, white, stage:Stage II, alive, 693 days
27.2
TCGA-WQ-AB4B-01A
0 years, male, white, stage:Stage II, alive, 395 days
27.1
TCGA-MR-A520-01A
0 years, male, white, stage:Stage I, alive, 229 days
27.1
TCGA-DD-A4NH-01A
0 years, female, white, stage:Stage IIIB, alive, 917 days
27.0
TCGA-ED-A97K-01A
0 years, male, asian, stage:Stage IIIA, alive, 6 days
26.9
TCGA-2Y-A9GZ-01A
0 years, female, white, stage:Stage II, dead, 848 days
26.9
TCGA-BC-A217-01A
0 years, female, white, stage:Stage II, dead, 1397 days
26.8
TCGA-ED-A5KG-01A
0 years, female, asian, stage:Stage II, alive, 854 days
26.8
TCGA-RC-A7S9-01A
0 years, female, asian, stage:Stage I, alive, 640 days
26.7
TCGA-EP-A12J-01A
0 years, male, black or african american, stage:Stage I, alive, 570 days
26.4
TCGA-K7-AAU7-01A
0 years, male, white, stage:Stage II, alive, 359 days
26.3
TCGA-QA-A7B7-01A
0 years, male, black or african american, stage:Stage II, alive, 94 days
26.2
TCGA-2Y-A9H0-01A
0 years, male, white, stage:Stage IIIA, alive, 3675 days
26.1
TCGA-ED-A4XI-01A
0 years, male, asian, stage:Stage II, alive, 819 days
26.0
TCGA-UB-A7MF-01A
0 years, male, white, stage:Stage IIIA, dead, 214 days
25.9
TCGA-DD-AAVW-01A
0 years, male, asian, stage:Stage I, alive, 2317 days
25.7
TCGA-WX-AA47-01A
0 years, female, white, stage:Stage IIIA, dead, 556 days
25.6
TCGA-K7-A5RG-01A
0 years, male, black or african american, stage:Stage I, alive, 519 days
25.3
TCGA-2Y-A9GX-01A
0 years, male, white, stage:Stage I, alive, 2442 days
25.2
TCGA-ED-A7PX-01A
0 years, female, asian, stage:Stage II, alive, 6 days
25.2
TCGA-G3-A7M8-01A
0 years, male, asian, stage:Stage I, alive, 430 days
25.2
TCGA-G3-AAV1-01A
0 years, male, asian, stage:Stage IIIC, dead, 359 days
25.2
TCGA-DD-A4NB-01A
0 years, male, white, stage:Stage I, alive, 989 days
25.1
TCGA-XR-A8TC-01A
0 years, female, white, stage:Stage I, alive, 1339 days
25.0
TCGA-UB-A7MC-01A
0 years, male, white, stage:Stage IIIA, alive, 500 days
24.9
TCGA-ED-A627-01A
0 years, male, white, stage:Stage I, alive, 423 days
24.9
TCGA-RG-A7D4-01A
0 years, male, black or african american, stage:Stage II, alive, 1098 days
24.9
TCGA-DD-AAW0-01A
0 years, male, asian, stage:Stage I, alive, 2015 days
24.7
TCGA-FV-A3R3-01A
0 years, female, white, stage:Stage I, dead, 366 days
24.5
TCGA-DD-A73A-01A
0 years, male, white, stage:Stage I, alive, 728 days
24.4
TCGA-DD-AACI-01A
0 years, male, asian, stage:Stage II, alive, 1618 days
24.4
TCGA-CC-A9FS-01A
0 years, male, asian, stage:Stage II, alive, 211 days
24.1
TCGA-DD-AAVX-01A
0 years, male, asian, stage:Stage II, alive, 1718 days
24.0
TCGA-ZP-A9CY-01A
0 years, female, white, stage:'--, alive, 782 days
24.0
TCGA-CC-A8HV-01A
0 years, female, asian, stage:Stage II, dead, 279 days
23.8
TCGA-RC-A7SF-01A
0 years, male, asian, stage:Stage I, alive, 579 days
23.8
TCGA-DD-AAD2-01A
0 years, male, asian, stage:Stage I, alive, 658 days
23.6
TCGA-EP-A2KB-01A
0 years, female, white, stage:Stage I, dead, 596 days
23.6
TCGA-CC-A123-01A
0 years, female, asian, stage:Stage IIIA, alive, 219 days
23.5
TCGA-2Y-A9GV-01A
0 years, female, white, stage:Stage I, dead, 2532 days
23.3
TCGA-DD-AAE7-01A
0 years, male, asian, stage:Stage I, alive, 644 days
23.3
TCGA-ZP-A9D0-01A
0 years, female, black or african american, stage:'--, alive, 1091 days
23.3
TCGA-DD-AADP-01A
0 years, male, asian, stage:Stage I, alive, 458 days
23.1
TCGA-G3-A5SI-01A
0 years, male, asian, stage:Stage II, dead, 768 days
23.1
TCGA-2Y-A9GT-01A
0 years, male, white, stage:Stage I, dead, 1624 days
22.9
TCGA-CC-A7IG-01A
0 years, male, asian, stage:Stage II, dead, 299 days
22.9
TCGA-DD-A39X-01A
0 years, female, white, stage:Stage I, dead, 1694 days
22.7
TCGA-CC-5258-01A
0 years, male, asian, stage:Stage II, dead, 129 days
22.5
TCGA-BC-A10W-01A
0 years, male, asian, stage:'--, dead, 91 days
22.4
TCGA-DD-A4NE-01A
0 years, female, white, stage:Stage IIIA, dead, 660 days
22.4
TCGA-MR-A8JO-01A
0 years, male, white, stage:Stage I, alive, 330 days
22.0
TCGA-DD-AAVR-01A
0 years, male, asian, stage:Stage I, alive, 2513 days
21.8
TCGA-DD-AAEH-01A
0 years, male, asian, stage:Stage I, alive, 784 days
21.8
TCGA-HP-A5MZ-01A
0 years, male, stage:Stage I, dead, 91 days
21.8
TCGA-WX-AA46-01A
0 years, male, white, stage:Stage II, alive, 756 days
21.6
TCGA-DD-AADN-01A
0 years, male, asian, stage:Stage I, alive, 898 days
21.3
TCGA-5R-AAAM-01A
0 years, female, white, stage:Stage II, dead, 46 days
21.3
TCGA-CC-5259-01A
0 years, female, asian, stage:Stage IIIC, alive, 250 days
21.1
TCGA-DD-AACZ-01A
0 years, female, asian, stage:Stage I, dead, 171 days
21.1
TCGA-DD-AADR-01A
0 years, male, asian, stage:Stage I, alive, 2028 days
20.9
TCGA-DD-AADF-01A
0 years, female, asian, stage:Stage I, dead, 115 days
20.4
TCGA-DD-AAEK-01A
0 years, male, asian, stage:Stage II, alive, 1067 days
20.3
TCGA-CC-A8HU-01A
0 years, female, asian, stage:Stage IIIA, dead, 344 days
20.1
TCGA-DD-AADA-01A
0 years, female, asian, stage:Stage I, alive, 1233 days
20.1
TCGA-CC-5261-01A
0 years, male, asian, stage:Stage II, dead, 97 days
19.9
TCGA-DD-A3A4-01A
0 years, male, white, stage:Stage IIIA, dead, 612 days
19.6
TCGA-G3-A3CI-01A
0 years, male, white, stage:Stage I, alive, 180 days
19.3
TCGA-DD-AAVZ-01A
0 years, male, asian, stage:Stage I, alive, 1900 days
19.1
TCGA-DD-AADO-01A
0 years, male, asian, stage:Stage I, alive, 453 days
18.9
TCGA-DD-AACY-01A
0 years, male, asian, stage:Stage I, alive, 1450 days
18.7
TCGA-UB-AA0V-01A
0 years, female, white, stage:Stage I, alive, 314 days
18.7
TCGA-DD-AAD6-01A
0 years, male, asian, stage:Stage IIIA, alive, 672 days
18.2
TCGA-DD-AADQ-01A
0 years, male, asian, stage:Stage II, alive, 436 days
18.1
TCGA-G3-A25U-01A
0 years, female, asian, stage:Stage I, alive, 1636 days
18.1
TCGA-CC-A7IF-01A
0 years, male, asian, stage:Stage IIIA, dead, 649 days
18.1
TCGA-DD-A4NG-01A
0 years, male, white, stage:Stage IIIA, dead, 802 days
18.0
TCGA-DD-AACB-01A
0 years, female, asian, stage:Stage I, alive, 2324 days
17.9
TCGA-ED-A7PY-01A
0 years, female, asian, stage:Stage II, alive, 390 days
17.8
TCGA-DD-A1ED-01A
0 years, male, white, stage:Stage I, alive, 2301 days
17.4
TCGA-UB-A7MA-01A
0 years, female, white, stage:Stage II, alive, 848 days
17.1
TCGA-CC-A7IE-01A
0 years, male, asian, stage:Stage IIIA, dead, 217 days
16.9
TCGA-CC-A8HS-01A
0 years, male, asian, stage:Stage IIIC, dead, 300 days
16.6
TCGA-BC-A110-01A
0 years, female, black or african american, stage:'--, dead, 2116 days
15.9
TCGA-LG-A9QD-01A
0 years, male, white, stage:Stage IIIA, alive, 366 days
15.7
TCGA-DD-A73B-01A
0 years, female, white, stage:Stage I, dead, 283 days
15.4
TCGA-5R-AA1D-01A
0 years, female, white, stage:Stage IIIA, alive, 449 days
15.1
TCGA-DD-A1EL-01A
0 years, male, black or african american, stage:Stage II, dead, 415 days
15.1
TCGA-BC-A10X-01A
0 years, female, white, stage:Stage IIIA, dead, 770 days
14.5
TCGA-DD-A4NL-01A
0 years, male, white, stage:Stage I, alive, 1711 days
14.5
TCGA-DD-AAC9-01A
0 years, male, asian, stage:Stage I, alive, 347 days
13.7
TCGA-NI-A8LF-01A
0 years, male, white, stage:Stage I, alive, 799 days
13.6
TCGA-DD-A4ND-01A
0 years, female, white, stage:Stage I, alive, 2746 days
13.2
TCGA-ED-A8O5-01A
0 years, female, asian, stage:Stage IIIA, alive, 406 days
13.2
TCGA-CC-A5UC-01A
0 years, male, asian, stage:Stage IIIA, dead, 347 days
12.2
TCGA-DD-AACO-01A
0 years, male, asian, stage:Stage I, alive, 1876 days
12.0
TCGA-G3-A5SK-01A
0 years, male, white, stage:Stage I, alive, 744 days
11.9
TCGA-ZS-A9CF-01A
0 years, male, white, stage:Stage II, alive, 2412 days
10.3
TCGA-DD-AAE4-01A
0 years, female, asian, stage:Stage I, alive, 608 days
8.8
TCGA-FV-A496-01A
0 years, female, white, stage:Stage I, alive, 10 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
FASTK is not prognostic in Liver Hepatocellular Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
51.2
Number of samples
231
Samples
Sample
Description
TPM
DO50839
0 years, female, NA, stage:3, alive, 330 days
162.3
DO45125
0 years, male, NA, stage:3, alive, 1680 days
160.3
DO23540
0 years, male, NA, stage:1, alive, 750 days
154.5
DO45209
0 years, male, NA, stage:4, alive, 1350 days
153.5
DO23511
0 years, female, NA, stage:3, dead, 180 days
151.9
DO23526
0 years, male, NA, stage:3, alive, 1050 days
129.7
DO23532
0 years, female, NA, stage:1, alive, 960 days
128.6
DO45217
0 years, female, NA, stage:3, dead, 270 days
126.2
DO50816
0 years, male, NA, stage:2, alive, 390 days
117.6
DO45241
0 years, male, NA, stage:1, alive, 1080 days
116.9
DO50814
0 years, male, NA, stage:3, alive, 420 days
115.8
DO45131
0 years, male, NA, stage:4, dead, 360 days
115.3
DO45149
0 years, female, NA, stage:2, alive, 1260 days
114.3
DO45105
0 years, male, NA, stage:1, alive, 1680 days
100.6
DO45159
0 years, male, NA, stage:3, alive, 1470 days
97.9
DO48701
0 years, male, NA, stage:2, alive, 780 days
96.2
DO23515
0 years, male, NA, stage:2, alive, 1230 days
92.6
DO23525
0 years, male, NA, stage:4, alive, 1050 days
90.2
DO23546
0 years, male, NA, stage:2, alive, 1050 days
89.1
DO45289
0 years, female, NA, stage:3, alive, 360 days
86.8
DO50844
0 years, male, NA, stage:4, alive, 300 days
86.2
DO50783
0 years, male, NA, stage:3, alive, 480 days
85.1
DO48679
0 years, male, NA, stage:2, alive, 1200 days
84.9
DO50817
0 years, male, NA, stage:2, alive, 390 days
83.7
DO48747
0 years, male, NA, stage:3, alive, 540 days
83.5
DO45107
0 years, female, NA, stage:2, alive, 1710 days
83.3
DO45145
0 years, male, NA, stage:3, dead, 60 days
82.6
DO45305
0 years, male, NA, stage:4, alive, 300 days
82.5
DO23548
0 years, female, NA, stage:1, alive, 840 days
81.9
DO23513
0 years, male, NA, stage:3, alive, 1200 days
81.7
DO50804
0 years, male, NA, stage:2, alive, 720 days
81.2
DO50815
0 years, male, NA, stage:3, alive, 150 days
81.1
DO50855
0 years, male, NA, stage:2, alive, 570 days
80.4
DO23512
0 years, male, NA, stage:1, alive, 1260 days
79.5
DO50829
0 years, male, NA, stage:3, alive, 570 days
77.3
DO45193
0 years, female, NA, stage:4, dead, 120 days
76.8
DO45307
0 years, female, NA, stage:4, dead, 240 days
76.1
DO45273
0 years, male, NA, stage:2, alive, 480 days
75.9
DO50798
0 years, male, NA, stage:3, dead, 30 days
75.7
DO45101
0 years, male, NA, stage:2, alive, 1680 days
75.4
DO45301
0 years, male, NA, stage:2, dead, 1440 days
75.3
DO48693
0 years, male, NA, stage:2, alive, 900 days
75.1
DO45297
0 years, female, NA, stage:4, dead, 1260 days
75.0
DO23539
0 years, male, NA, stage:1, alive, 1110 days
73.1
DO50809
0 years, male, NA, stage:3, dead, 720 days
73.0
DO23547
0 years, male, NA, stage:1, alive, 1020 days
72.3
DO45285
0 years, male, NA, stage:3, alive, 480 days
72.0
DO23519
0 years, male, NA, stage:3, alive, 630 days
72.0
DO50832
0 years, male, NA, stage:3, alive, 90 days
70.8
DO50845
0 years, male, NA, stage:3, alive, 210 days
70.3
DO45095
0 years, male, NA, stage:2, alive, 1620 days
69.7
DO23516
0 years, male, NA, stage:3, dead, 20 days
68.8
DO48715
0 years, female, NA, stage:2, dead, 690 days
68.5
DO48697
0 years, female, NA, stage:2, dead, 810 days
67.6
DO50811
0 years, male, NA, stage:1, alive, 450 days
67.5
DO45185
0 years, male, NA, stage:2, alive, 600 days
67.1
DO45097
0 years, male, NA, stage:3, alive, 1620 days
66.1
DO45275
0 years, male, NA, stage:3, dead, 10 days
65.0
DO50806
0 years, male, NA, stage:4, alive, 540 days
64.4
DO23549
0 years, male, NA, stage:3, alive, 990 days
64.2
DO23508
0 years, female, NA, stage:2, alive, 390 days
63.8
DO45092
0 years, male, NA, stage:4, dead, 1200 days
63.7
DO48736
0 years, female, NA, stage:1, alive, 600 days
63.3
DO23533
0 years, male, NA, stage:2, alive, 900 days
63.2
DO50791
0 years, female, NA, stage:1, dead, 480 days
62.1
DO23528
0 years, female, NA, stage:2, alive, 1020 days
62.1
DO23545
0 years, male, NA, stage:2, dead, 570 days
61.1
DO45287
0 years, male, NA, stage:1, alive, 390 days
61.0
DO45249
0 years, male, NA, stage:1, alive, 630 days
59.5
DO45103
0 years, male, NA, stage:3, alive, 450 days
59.3
DO45155
0 years, male, NA, stage:2, alive, 2160 days
58.7
DO50802
0 years, male, NA, stage:2, alive, 930 days
57.7
DO45243
0 years, female, NA, stage:3, alive, 930 days
57.1
DO45299
0 years, female, NA, stage:1, alive, 1440 days
55.5
DO45265
0 years, male, NA, stage:3, alive, 1020 days
55.4
DO45201
0 years, male, NA, stage:1, alive, 900 days
54.9
DO48717
0 years, male, NA, stage:4, dead, 180 days
54.7
DO23534
0 years, male, NA, stage:2, alive, 840 days
54.3
DO50813
0 years, male, NA, stage:2, alive, 420 days
54.0
DO23543
0 years, male, NA, stage:2, alive, 1020 days
53.0
DO45303
0 years, female, NA, stage:3, alive, 990 days
52.9
DO48737
0 years, male, NA, stage:1, alive, 720 days
52.3
DO23510
0 years, female, NA, stage:2, alive, 870 days
52.1
DO45267
0 years, male, NA, stage:3, dead, 570 days
51.7
DO45161
0 years, male, NA, stage:2, dead, 540 days
51.6
DO48759
0 years, male, NA, stage:3, alive, 720 days
51.1
DO45199
0 years, female, NA, stage:2, alive, 1350 days
51.0
DO48741
0 years, male, NA, stage:3, alive, 240 days
50.7
DO45133
0 years, male, NA, stage:3, dead, 660 days
50.3
DO45281
0 years, male, NA, stage:4, alive, 750 days
49.7
DO50799
0 years, female, NA, stage:2, alive, 540 days
48.6
DO48757
0 years, female, NA, stage:3, alive, 480 days
48.5
DO45115
0 years, male, NA, stage:2, alive, 840 days
48.4
DO48719
0 years, male, NA, stage:2, alive, 690 days
47.7
DO23537
0 years, male, NA, stage:2, dead, 900 days
47.4
DO45171
0 years, male, NA, stage:3, alive, 600 days
47.1
DO50793
0 years, male, NA, stage:4, alive, 540 days
47.0
DO45141
0 years, male, NA, stage:2, alive, 1320 days
46.9
DO48677
0 years, male, NA, stage:3, alive, 1140 days
46.9
DO48746
0 years, male, NA, stage:3, alive, 570 days
46.8
DO45245
0 years, female, NA, stage:2, dead, 240 days
46.6
DO48700
0 years, female, NA, stage:2, alive, 810 days
46.4
DO48732
0 years, male, NA, stage:3, alive, 630 days
45.7
DO45215
0 years, male, NA, stage:2, alive, 1170 days
45.0
DO45221
0 years, female, NA, stage:4, dead, 390 days
44.4
DO45153
0 years, female, NA, stage:2, alive, 1380 days
44.4
DO45253
0 years, male, NA, stage:2, alive, 870 days
44.3
DO45229
0 years, male, NA, stage:1, alive, 990 days
44.2
DO23552
0 years, female, NA, stage:1, alive, 810 days
44.2
DO45251
0 years, female, NA, stage:2, alive, 900 days
44.1
DO48681
0 years, male, NA, stage:2, alive, 900 days
44.0
DO45183
0 years, female, NA, stage:2, dead, 570 days
43.9
DO48725
0 years, male, NA, stage:1, alive, 780 days
43.8
DO45169
0 years, male, NA, stage:3, alive, 1350 days
43.6
DO45259
0 years, male, NA, stage:3, alive, 330 days
43.5
DO45139
0 years, male, NA, stage:3, alive, 1320 days
43.5
DO45167
0 years, male, NA, stage:2, dead, 1440 days
43.3
DO45121
0 years, male, NA, stage:3, alive, 1530 days
43.3
DO45283
0 years, male, NA, stage:3, alive, 510 days
43.3
DO45119
0 years, male, NA, stage:3, dead, 510 days
42.9
DO48730
0 years, female, NA, stage:2, alive, 630 days
42.8
DO45205
0 years, female, NA, stage:2, dead, 90 days
42.4
DO45277
0 years, male, NA, stage:3, alive, 600 days
42.3
DO45263
0 years, male, NA, stage:3, dead, 270 days
42.1
DO50778
0 years, male, NA, stage:4, alive, 630 days
41.6
DO45279
0 years, male, NA, stage:3, alive, 1290 days
41.0
DO48706
0 years, male, NA, stage:2, alive, 870 days
41.0
DO50825
0 years, male, NA, stage:2, alive, 390 days
40.8
DO50776
0 years, male, NA, stage:1, alive, 690 days
40.6
DO45189
0 years, female, NA, stage:2, alive, 1200 days
40.4
DO23509
0 years, male, NA, stage:3, dead, 780 days
40.4
DO45113
0 years, male, NA, stage:3, alive, 1560 days
40.2
DO45109
0 years, male, NA, stage:2, alive, 1590 days
39.9
DO45255
0 years, male, NA, stage:3, alive, 720 days
39.6
DO45117
0 years, female, NA, stage:2, dead, 1110 days
39.5
DO50820
0 years, female, NA, stage:3, alive, 510 days
39.3
DO45096
0 years, male, NA, stage:2, dead, 1290 days
39.2
DO48712
0 years, male, NA, stage:2, alive, 810 days
38.2
DO50805
0 years, male, NA, stage:2, alive, 690 days
38.0
DO50819
0 years, female, NA, stage:2, alive, 510 days
37.8
DO48704
0 years, female, NA, stage:3, alive, 750 days
37.5
DO48716
0 years, male, NA, stage:2, alive, 720 days
37.3
DO45137
0 years, male, NA, stage:1, alive, 1320 days
36.8
DO23518
0 years, male, NA, stage:2, alive, 1320 days
36.7
DO48743
0 years, female, NA, stage:2, alive, 570 days
36.5
DO50850
0 years, male, NA, stage:3, alive, 720 days
36.2
DO45099
0 years, male, NA, stage:3, alive, 1590 days
35.8
DO45143
0 years, male, NA, stage:3, alive, 1290 days
35.7
DO23523
0 years, male, NA, stage:3, alive, 1080 days
35.6
DO45173
0 years, male, NA, stage:3, alive, 1170 days
35.6
DO45257
0 years, male, NA, stage:3, alive, 810 days
35.5
DO45207
0 years, male, NA, stage:1, alive, 1050 days
35.5
DO48672
0 years, male, NA, stage:2, alive, 450 days
35.2
DO45123
0 years, female, NA, stage:2, dead, 570 days
34.9
DO48751
0 years, male, NA, stage:2, dead, 480 days
34.9
DO45237
0 years, male, NA, stage:2, alive, 900 days
34.8
DO23524
0 years, female, NA, stage:2, alive, 1050 days
34.5
DO48695
0 years, male, NA, stage:2, alive, 720 days
34.4
DO23541
0 years, male, NA, stage:2, alive, 930 days
34.3
DO50807
0 years, male, NA, stage:1, alive, 540 days
34.2
DO48728
0 years, female, NA, stage:2, alive, 150 days
34.2
DO23529
0 years, male, NA, stage:4, alive, 930 days
34.0
DO48733
0 years, male, NA, stage:2, alive, 600 days
33.9
DO45269
0 years, male, NA, stage:3, alive, 750 days
33.6
DO48720
0 years, female, NA, stage:2, alive, 570 days
33.0
DO50818
0 years, male, NA, stage:2, alive, 510 days
32.8
DO227643
0 years, male, NA, stage:2, alive, 1260 days
32.8
DO48682
0 years, female, NA, stage:3, dead, 120 days
32.7
DO23536
0 years, male, NA, stage:2, alive, 930 days
32.5
DO45091
0 years, male, NA, stage:2, dead, 1320 days
32.0
DO45219
0 years, male, NA, stage:2, alive, 1080 days
31.8
DO48723
0 years, male, NA, stage:1, alive, 600 days
31.5
DO45261
0 years, male, NA, stage:3, alive, 990 days
31.2
DO48721
0 years, female, NA, stage:1, alive, 900 days
31.2
DO45177
0 years, female, NA, stage:3, alive, 1260 days
31.1
DO45235
0 years, female, NA, stage:1, alive, 900 days
31.1
DO45233
0 years, male, NA, stage:3, alive, 900 days
31.1
DO23527
0 years, male, NA, stage:1, alive, 1050 days
31.0
DO48742
0 years, male, NA, stage:2, alive, 600 days
30.9
DO50822
0 years, male, NA, stage:2, alive, 510 days
30.8
DO45179
0 years, female, NA, stage:2, alive, 600 days
30.3
DO45157
0 years, male, NA, stage:2, alive, 1980 days
30.2
DO50808
0 years, male, NA, stage:2, alive, 570 days
30.0
DO23535
0 years, male, NA, stage:1, alive, 960 days
29.6
DO50859
0 years, male, NA, stage:2, alive, 180 days
29.5
DO50800
0 years, male, NA, stage:2, alive, 510 days
29.3
DO45213
0 years, male, NA, stage:1, alive, 1200 days
29.2
DO45211
0 years, male, NA, stage:3, alive, 240 days
28.7
DO50840
0 years, male, NA, stage:2, alive, 330 days
28.2
DO23521
0 years, male, NA, stage:3, alive, 1110 days
28.2
DO45175
0 years, male, NA, stage:2, alive, 1140 days
28.1
DO227801
0 years, female, NA, stage:1, alive, 660 days
27.1
DO45203
0 years, female, NA, stage:2, alive, 1170 days
27.1
DO45225
0 years, male, NA, stage:1, alive, 1050 days
27.0
DO45231
0 years, male, NA, stage:2, alive, 930 days
26.6
DO50789
0 years, female, NA, stage:2, alive, 570 days
26.5
DO45129
0 years, male, NA, stage:3, alive, 1470 days
26.5
DO45093
0 years, male, NA, stage:2, dead, 720 days
26.3
DO50785
0 years, male, NA, stage:4, dead, 90 days
26.2
DO45165
0 years, male, NA, stage:2, alive, 690 days
25.9
DO48674
0 years, male, NA, stage:2, alive, 1260 days
25.9
DO23514
0 years, male, NA, stage:2, alive, 1290 days
25.9
DO50803
0 years, female, NA, stage:1, alive, 540 days
25.8
DO23530
0 years, male, NA, stage:4, dead, 180 days
25.6
DO23550
0 years, male, NA, stage:1, alive, 990 days
25.3
DO50787
0 years, male, NA, stage:3, alive, 480 days
25.1
DO23542
0 years, male, NA, stage:3, alive, 960 days
25.0
DO48727
0 years, female, NA, stage:2, dead, 390 days
24.9
DO23538
0 years, male, NA, stage:2, alive, 450 days
24.5
DO45197
0 years, male, NA, stage:2, alive, 1170 days
24.4
DO45135
0 years, male, NA, stage:1, alive, 1410 days
24.2
DO23544
0 years, male, NA, stage:2, alive, 960 days
24.0
DO45239
0 years, male, NA, stage:2, alive, 870 days
23.9
DO45094
0 years, male, NA, stage:3, alive, 1650 days
23.7
DO45191
0 years, female, NA, stage:2, alive, 1200 days
23.6
DO50857
0 years, male, NA, stage:2, alive, 210 days
23.5
DO45223
0 years, male, NA, stage:4, alive, 1020 days
21.8
DO48760
0 years, female, NA, stage:2, alive, 690 days
21.7
DO45181
0 years, female, NA, stage:2, alive, 1200 days
20.7
DO50774
0 years, female, NA, stage:2, alive, 720 days
19.4
DO45111
0 years, male, NA, stage:2, alive, 1590 days
19.1
DO45127
0 years, male, NA, stage:3, dead, 420 days
18.8
DO45247
0 years, female, NA, stage:2, alive, 210 days
18.2
DO48761
0 years, male, NA, stage:2, alive, 870 days
17.8
DO45227
0 years, female, NA, stage:2, alive, 1020 days
16.9
DO23551
0 years, male, NA, stage:3, dead, 150 days
16.3
DO23517
0 years, male, NA, stage:2, alive, 1200 days
16.0
DO45195
0 years, male, NA, stage:1, alive, 390 days
15.6
DO45187
0 years, female, NA, stage:1, alive, 1260 days
14.9
DO23531
0 years, female, NA, stage:3, alive, 900 days
12.9
DO45163
0 years, male, NA, stage:2, alive, 960 days
12.4
Show allShow less
LIVER HEPATOCELLULAR CARCINOMA - Protein relative expression (CPTAC)
Number of samples
330
Samples
Sample ID
Sample type
nRPX
471
Tumor
N/A
351
Tumor
N/A
472
Normal
N/A
231
Tumor
N/A
352
Normal
N/A
473
Tumor
N/A
111
Normal
N/A
232
Normal
N/A
353
Tumor
N/A
474
Normal
N/A
112
Tumor
N/A
354
Normal
N/A
113
Tumor
N/A
355
Tumor
N/A
114
Normal
N/A
356
Normal
N/A
477
Tumor
N/A
357
Tumor
N/A
478
Normal
N/A
358
Normal
N/A
911
Tumor
N/A
912
Normal
N/A
913
Tumor
N/A
914
Normal
N/A
915
Tumor
N/A
916
Normal
N/A
917
Tumor
N/A
918
Normal
N/A
481
Tumor
N/A
361
Tumor
N/A
482
Normal
N/A
362
Normal
N/A
483
Tumor
N/A
363
Tumor
N/A
484
Normal
N/A
364
Normal
N/A
123
Tumor
N/A
365
Tumor
N/A
124
Normal
N/A
366
Normal
N/A
487
Tumor
N/A
125
Tumor
N/A
367
Tumor
N/A
488
Normal
N/A
126
Normal
N/A
368
Normal
N/A
127
Tumor
N/A
128
Normal
N/A
921
Tumor
N/A
922
Normal
N/A
923
Tumor
N/A
924
Normal
N/A
925
Tumor
N/A
926
Normal
N/A
491
Tumor
N/A
492
Normal
N/A
493
Tumor
N/A
131
Tumor
N/A
494
Normal
N/A
132
Normal
N/A
375
Tumor
N/A
376
Normal
N/A
497
Tumor
N/A
135
Tumor
N/A
498
Normal
N/A
136
Normal
N/A
257
Tumor
N/A
137
Tumor
N/A
258
Normal
N/A
138
Normal
N/A
813
Tumor
N/A
814
Normal
N/A
815
Tumor
N/A
816
Normal
N/A
937
Tumor
N/A
817
Tumor
N/A
938
Normal
N/A
818
Normal
N/A
261
Tumor
N/A
141
Tumor
N/A
262
Normal
N/A
383
Tumor
N/A
142
Normal
N/A
384
Normal
N/A
385
Tumor
N/A
386
Normal
N/A
145
Tumor
N/A
387
Tumor
N/A
146
Normal
N/A
267
Tumor
N/A
388
Normal
N/A
147
Tumor
N/A
268
Normal
N/A
148
Normal
N/A
943
Tumor
N/A
823
Tumor
N/A
944
Normal
N/A
824
Normal
N/A
1022
Normal
N/A
1021
Tumor
N/A
391
Tumor
N/A
271
Tumor
N/A
392
Normal
N/A
272
Normal
N/A
393
Tumor
N/A
394
Normal
N/A
395
Tumor
N/A
396
Normal
N/A
277
Tumor
N/A
1016
Normal
N/A
278
Normal
N/A
1015
Tumor
N/A
1014
Normal
N/A
951
Tumor
N/A
1013
Tumor
N/A
952
Normal
N/A
953
Tumor
N/A
954
Normal
N/A
713
Tumor
N/A
955
Tumor
N/A
714
Normal
N/A
956
Normal
N/A
715
Tumor
N/A
957
Tumor
N/A
716
Normal
N/A
958
Normal
N/A
1032
Normal
N/A
1031
Tumor
N/A
161
Tumor
N/A
162
Normal
N/A
283
Tumor
N/A
284
Normal
N/A
285
Tumor
N/A
286
Normal
N/A
1028
Normal
N/A
1027
Tumor
N/A
1026
Normal
N/A
1025
Tumor
N/A
721
Tumor
N/A
963
Tumor
N/A
722
Normal
N/A
964
Normal
N/A
723
Tumor
N/A
965
Tumor
N/A
724
Normal
N/A
966
Normal
N/A
967
Tumor
N/A
968
Normal
N/A
727
Tumor
N/A
728
Normal
N/A
1044
Normal
N/A
1043
Tumor
N/A
1042
Normal
N/A
1041
Tumor
N/A
171
Tumor
N/A
172
Normal
N/A
297
Tumor
N/A
298
Normal
N/A
851
Tumor
N/A
852
Normal
N/A
975
Tumor
N/A
976
Normal
N/A
977
Tumor
N/A
615
Tumor
N/A
857
Tumor
N/A
978
Normal
N/A
616
Normal
N/A
737
Tumor
N/A
858
Normal
N/A
617
Tumor
N/A
738
Normal
N/A
618
Normal
N/A
185
Tumor
N/A
186
Normal
N/A
187
Tumor
N/A
188
Normal
N/A
981
Tumor
N/A
861
Tumor
N/A
982
Normal
N/A
741
Tumor
N/A
862
Normal
N/A
983
Tumor
N/A
742
Normal
N/A
863
Tumor
N/A
984
Normal
N/A
1046
Normal
N/A
743
Tumor
N/A
864
Normal
N/A
1045
Tumor
N/A
744
Normal
N/A
865
Tumor
N/A
745
Tumor
N/A
866
Normal
N/A
746
Normal
N/A
867
Tumor
N/A
868
Normal
N/A
627
Tumor
N/A
628
Normal
N/A
191
Tumor
N/A
192
Normal
N/A
195
Tumor
N/A
196
Normal
N/A
873
Tumor
N/A
874
Normal
N/A
513
Tumor
N/A
755
Tumor
N/A
514
Normal
N/A
635
Tumor
N/A
756
Normal
N/A
877
Tumor
N/A
515
Tumor
N/A
636
Normal
N/A
878
Normal
N/A
516
Normal
N/A
517
Tumor
N/A
518
Normal
N/A
881
Tumor
N/A
882
Normal
N/A
641
Tumor
N/A
883
Tumor
N/A
642
Normal
N/A
884
Normal
N/A
523
Tumor
N/A
524
Normal
N/A
525
Tumor
N/A
526
Normal
N/A
647
Tumor
N/A
527
Tumor
N/A
648
Normal
N/A
528
Normal
N/A
411
Tumor
N/A
412
Normal
N/A
533
Tumor
N/A
413
Tumor
N/A
534
Normal
N/A
414
Normal
N/A
535
Tumor
N/A
777
Tumor
N/A
415
Tumor
N/A
536
Normal
N/A
778
Normal
N/A
416
Normal
N/A
537
Tumor
N/A
538
Normal
N/A
661
Tumor
N/A
662
Normal
N/A
421
Tumor
N/A
663
Tumor
N/A
422
Normal
N/A
664
Normal
N/A
785
Tumor
N/A
423
Tumor
N/A
665
Tumor
N/A
786
Normal
N/A
424
Normal
N/A
545
Tumor
N/A
666
Normal
N/A
425
Tumor
N/A
546
Normal
N/A
426
Normal
N/A
427
Tumor
N/A
428
Normal
N/A
671
Tumor
N/A
672
Normal
N/A
431
Tumor
N/A
311
Tumor
N/A
432
Normal
N/A
553
Tumor
N/A
312
Normal
N/A
433
Tumor
N/A
554
Normal
N/A
313
Tumor
N/A
434
Normal
N/A
314
Normal
N/A
435
Tumor
N/A
436
Normal
N/A
557
Tumor
N/A
558
Normal
N/A
563
Tumor
N/A
443
Tumor
N/A
564
Normal
N/A
685
Tumor
N/A
444
Normal
N/A
686
Normal
N/A
445
Tumor
N/A
446
Normal
N/A
567
Tumor
N/A
447
Tumor
N/A
568
Normal
N/A
327
Tumor
N/A
448
Normal
N/A
328
Normal
N/A
571
Tumor
N/A
451
Tumor
N/A
572
Normal
N/A
331
Tumor
N/A
452
Normal
N/A
573
Tumor
N/A
211
Tumor
N/A
332
Normal
N/A
574
Normal
N/A
695
Tumor
N/A
212
Normal
N/A
696
Normal
N/A
213
Tumor
N/A
455
Tumor
N/A
697
Tumor
N/A
214
Normal
N/A
456
Normal
N/A
698
Normal
N/A
217
Tumor
N/A
218
Normal
N/A
461
Tumor
N/A
341
Tumor
N/A
462
Normal
N/A
221
Tumor
N/A
342
Normal
N/A
463
Tumor
N/A
222
Normal
N/A
343
Tumor
N/A
464
Normal
N/A
223
Tumor
N/A
344
Normal
N/A
465
Tumor
N/A
224
Normal
N/A
466
Normal
N/A
467
Tumor
N/A
468
Normal
N/A
227
Tumor
N/A
228
Normal
N/A
Show allShow less
LIVER CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
