HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:6.5 nTPM
HPA Brain:65.7 nTPM
GTEx:6.5 nTPM
FANTOM5:67.7 Scaled Tags Per Million
Pig:45.6 nTPM
Mouse:37.7 nTPM
Allen mouse:1.9 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA010657
Glial cells Not detected
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 65.7
Sample id Sample description nTPM
Hippocampus
nTPM: 45.6
2148 Female, age 91, left hemisphere 53.0
2621 Female, age 67, right hemisphere 51.8
1898 Male, age 80, left hemisphere 50.2
1855 Male, age 76, left hemisphere 43.6
2529 Female, age 94, left hemisphere 39.8
1911 Female, age 85, right hemisphere 35.4
Dentate gyrus
nTPM: 47.7
2531 Female, age 67, both hemispheres 62.9
1927 Female, age 91, both hemispheres 57.8
2530 Female, age 94, left hemisphere 44.0
2246 Female, age 85, both hemispheres 41.3
2528 Male, age 74, both hemispheres 40.0
2010 Male, age 76, both hemispheres 39.9
Entorhinal gyrus
nTPM: 55.8
2613 Female, age 94, left hemisphere 63.2
2764 Male, age 80, right hemisphere 61.5
1938 Female, age 85, left hemisphere 58.9
2686 Male, age 75, right hemisphere 55.6
1787 Male, age 76, left hemisphere 55.1
2117 Female, age 91, right hemisphere 40.4
Hippocampus, CA1
nTPM: 49.6
2749 Male, age 80, left hemisphere 73.0
2045 Male, age 76, both hemispheres 49.3
2527 Male, age 74, both hemispheres 43.3
1873 Female, age 85, both hemispheres 42.7
2082 Female, age 91, right hemisphere 39.5
Hippocampus, CA2
nTPM: 46.7
1892 Male, age 76, both hemispheres 55.8
2437 Female, age 94, left hemisphere 51.0
1963 Male, age 80, left hemisphere 49.8
1940 Female, age 85, left hemisphere 48.4
2113 Female, age 91, right hemisphere 40.5
2249 Male, age 74, both hemispheres 34.8
Hippocampus, CA3
nTPM: 55.5
2620 Female, age 94, left hemisphere 78.8
2137 Male, age 80, left hemisphere 66.8
2861 Female, age 67, both hemispheres 65.1
1867 Male, age 76, both hemispheres 47.3
1891 Female, age 85, both hemispheres 38.7
2436 Male, age 74, both hemispheres 36.1
Parahippocampal cortex
nTPM: 56.0
2622 Female, age 67, right hemisphere 65.8
2532 Female, age 72, left hemisphere 65.3
1850 Male, age 80, both hemispheres 60.9
2693 Female, age 94, both hemispheres 60.5
2245 Female, age 91, both hemispheres 60.0
1990 Female, age 91, right hemisphere 58.6
1933 Female, age 85, both hemispheres 53.1
2250 Female, age 67, right hemisphere 51.0
2692 Male, age 74, both hemispheres 45.3
2018 Male, age 76, both hemispheres 39.9
Perirhinal gyrus
nTPM: 65.7
1794 Male, age 80, right hemisphere 70.7
1847 Female, age 91, left hemisphere 69.4
2521 Female, age 94, right hemisphere 66.2
1841 Female, age 85, right hemisphere 63.3
2848 Male, age 76, right hemisphere 59.1
Subiculum
nTPM: 42.8
1977 Female, age 85, both hemispheres 52.2
2438 Female, age 94, left hemisphere 47.5
1901 Male, age 80, both hemispheres 47.2
2619 Male, age 74, both hemispheres 46.7
2729 Female, age 91, right hemisphere 35.2
2042 Male, age 76, both hemispheres 28.2

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 6.5
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 6.5
Samples: 197

Max nTPM: 20.8
Min nTPM: 2.5
Std nTPM: 3.1
Median nTPM: 5.7
GTEX-WWYW-0011-R1A-SM-3TW8G 50-59 years, female 20.8
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 16.6
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 16.2
GTEX-WL46-0011-R1A-SM-3LK6M 50-59 years, male 15.1
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 14.5
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 14.2
GTEX-1GF9W-0011-R1a-SM-9QEIQ 60-69 years, male 13.3
GTEX-12WSF-0011-R1a-SM-5DUVI 70-79 years, male 13.1
GTEX-1ICLZ-0011-R1b-SM-A9SM3 60-69 years, male 13.1
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 13.0
GTEX-R55E-0011-R1A-SM-2TC6N 20-29 years, male 12.7
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 67.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 67.7
FF:10169-103B7 60 years, female 74.7
FF:10153-102I9 76 years, female 60.7

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 45.6
Pig sample Sample description nTPM
Subiculum
nTPM: 30.4
Samples: 4

Max nTPM: 41.3
Min nTPM: 24.7
Sample A Female 41.3
Sample B Female 25.0
Sample C Male 30.6
Sample D Male 24.7
Dorsal hippocampus
nTPM: 26.5
Samples: 4

Max nTPM: 30.4
Min nTPM: 18.2
Sample A Female 29.8
Sample B Female 27.6
Sample C Male 30.4
Sample D Male 18.2
Entorhinal cortex
nTPM: 45.6
Samples: 4

Max nTPM: 50.2
Min nTPM: 43.5
Sample A Female 50.2
Sample B Female 43.5
Sample C Male 43.9
Sample D Male 44.8
Ventral hippocampus
nTPM: 29.5
Samples: 4

Max nTPM: 39.7
Min nTPM: 19.7
Sample A Female 30.5
Sample B Female 19.7
Sample C Male 39.7
Sample D Male 28.0

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 37.7
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 37.7
Samples: 4

Max nTPM: 43.6
Min nTPM: 27.9
Sample A Male 38.9
Sample B Male 40.5
Sample C Female 27.9
Sample D Female 43.6
Hippocampal formation
nTPM: 23.3
Samples: 4

Max nTPM: 25.8
Min nTPM: 20.5
Sample A Male 21.2
Sample B Male 25.6
Sample C Female 25.8
Sample D Female 20.5

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 1.9
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 1.9
69736148 Antisense, RP_050503_04_C09, Mouse strain C57BL/6J (56 days, male) 1.9

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