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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
TLR3 is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
2.4
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
9.6
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
9.3
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
8.0
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
7.0
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
6.9
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
6.6
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
6.3
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
5.6
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
5.5
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
5.4
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
5.4
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
4.5
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
4.3
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
4.3
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
4.3
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
4.1
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
3.7
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
3.3
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
2.9
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
2.7
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
2.7
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
2.6
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
2.6
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
2.4
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
2.3
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
2.3
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
2.2
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
2.2
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
2.2
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
2.0
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
2.0
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
1.6
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
1.5
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
1.4
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
1.3
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
1.3
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
1.3
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
1.1
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
1.1
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
1.0
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
1.0
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
0.9
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
0.9
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
0.9
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
0.9
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
0.8
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
0.8
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
0.8
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
0.8
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
0.7
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
0.7
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
0.5
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
0.5
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
0.5
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
0.5
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
0.3
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
0.2
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
0.2
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
0.2
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
0.0
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
0.0
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
0.0
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
0.0
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
TLR3 is validated prognostic, high expression is favorable in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
36.5
Number of samples
521
Samples
Sample
Description
TPM
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
177.5
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
160.0
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
155.2
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
150.7
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
143.5
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
130.3
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
126.3
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
120.2
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
116.5
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
115.4
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
114.9
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
113.9
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
111.9
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
106.7
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
103.4
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
102.2
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
101.9
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
100.0
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
99.7
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
98.0
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
93.1
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
92.9
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
92.8
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
92.8
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
92.2
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
91.6
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
90.7
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
89.0
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
87.6
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
86.9
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
86.7
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
86.2
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
86.0
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
86.0
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
83.8
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
83.4
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
82.9
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
82.2
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
81.8
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
81.1
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
80.9
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
80.5
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
80.3
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
80.3
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
80.3
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
78.6
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
78.4
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
77.3
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
77.1
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
77.1
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
76.4
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
75.1
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
74.1
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
73.9
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
73.3
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
73.1
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
73.1
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
72.5
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
71.8
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
71.4
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
71.2
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
71.1
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
70.8
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
69.8
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
69.7
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
69.5
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
68.8
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
68.7
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
68.7
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
68.4
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
68.4
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
68.2
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
68.1
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
68.0
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
67.7
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
66.8
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
66.2
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
65.9
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
65.0
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
64.9
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
64.9
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
64.6
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
64.0
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
64.0
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
63.8
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
63.4
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
62.6
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
62.2
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
61.6
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
61.6
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
61.5
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
61.3
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
60.9
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
60.8
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
60.4
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
59.6
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
59.1
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
58.9
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
58.5
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
58.5
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
57.3
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
57.2
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
56.8
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
56.6
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
56.5
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
55.9
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
55.7
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
55.5
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
55.1
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
54.9
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
54.8
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
54.7
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
54.5
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
54.5
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
54.4
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
54.3
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
54.3
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
54.2
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
53.6
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
53.2
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
53.2
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
53.0
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
52.6
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
52.3
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
52.3
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
52.2
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
52.1
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
51.9
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
51.6
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
51.5
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
51.4
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
51.2
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
51.1
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
51.1
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
51.1
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
51.0
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
51.0
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
50.8
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
50.7
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
50.4
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
50.0
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
50.0
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
49.6
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
49.6
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
49.6
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
49.0
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
48.8
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
48.7
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
48.6
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
48.5
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
48.3
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
48.2
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
47.9
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
47.6
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
47.6
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
47.5
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
47.2
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
47.2
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
47.2
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
47.2
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
46.8
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
46.8
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
46.4
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
46.2
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
45.6
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
45.6
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
45.3
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
45.1
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
45.0
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
44.8
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
44.6
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
44.5
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
44.3
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
44.2
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
44.1
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
43.8
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
43.8
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
43.5
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
43.4
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
42.7
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
42.7
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
42.5
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
42.5
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
42.5
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
42.3
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
42.2
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
41.8
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
41.7
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
41.6
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
41.6
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
41.5
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
41.4
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
41.2
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
40.8
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
40.8
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
40.7
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
40.5
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
40.4
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
40.3
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
40.0
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
40.0
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
40.0
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
39.9
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
39.9
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
39.8
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
39.6
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
39.5
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
39.2
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
39.0
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
39.0
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
38.9
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
38.8
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
38.7
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
38.5
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
38.4
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
38.1
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
37.9
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
37.9
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
37.6
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
37.5
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
37.4
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
37.0
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
36.9
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
36.9
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
36.9
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
36.9
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
36.7
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
36.6
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
36.3
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
36.2
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
36.1
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
35.8
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
35.5
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
35.2
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
35.1
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
34.9
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
34.9
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
34.8
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
34.7
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
34.4
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
34.4
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
34.3
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
34.2
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
34.2
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
34.2
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
34.1
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
33.9
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
33.8
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
33.8
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
33.7
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
33.6
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
33.1
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
32.9
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
32.6
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
32.5
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
32.4
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
32.2
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
32.0
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
31.9
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
31.8
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
31.4
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
31.3
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
31.1
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
30.8
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
30.6
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
30.5
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
30.4
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
30.2
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
30.1
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
30.0
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
30.0
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
29.8
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
29.7
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
29.5
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
29.2
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
29.2
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
29.1
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
28.9
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
28.9
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
28.9
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
28.9
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
28.7
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
28.5
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
28.5
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
28.2
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
28.0
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
27.7
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
27.5
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
27.2
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
27.1
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
27.0
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
26.8
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
26.7
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
26.7
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
26.6
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
26.5
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
26.3
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
26.1
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
26.1
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
25.5
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
25.3
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
25.3
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
25.3
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
25.2
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
25.1
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
24.8
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
24.2
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
23.8
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
23.6
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
23.4
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
23.4
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
23.3
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
23.3
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
23.3
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
23.1
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
22.9
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
22.7
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
22.6
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
22.6
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
22.6
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
22.4
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
22.3
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
22.2
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
22.1
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
22.1
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
21.8
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
21.7
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
21.4
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
21.4
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
21.4
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
21.3
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
21.2
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
20.9
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
20.9
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
20.8
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
20.8
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
20.7
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
20.2
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
20.2
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
20.1
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
20.1
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
20.0
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
19.7
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
19.6
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
19.3
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
19.1
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
19.0
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
18.6
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
18.1
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
18.1
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
18.0
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
17.9
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
17.9
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
17.6
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
17.6
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
17.6
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
17.3
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
17.1
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
16.9
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
16.3
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
16.1
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
16.0
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
15.9
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
15.8
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
15.8
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
15.7
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
15.7
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
15.5
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
15.4
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
15.4
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
15.4
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
15.3
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
15.2
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
15.1
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
15.0
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
14.9
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
14.9
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
14.7
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
14.5
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
14.2
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
14.2
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
14.1
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
13.8
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
13.8
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
13.8
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
13.5
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
13.3
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
13.1
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
12.9
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
12.9
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
12.8
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
12.6
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
12.5
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
12.4
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
12.3
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
12.1
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
12.1
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
12.0
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
11.8
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
11.7
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
11.6
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
11.5
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
11.5
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
11.3
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
11.2
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
11.1
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
10.8
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
10.6
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
10.5
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
10.5
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
10.5
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
10.4
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
10.4
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
10.3
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
10.3
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
10.2
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
10.2
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
10.1
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
9.8
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
9.7
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
9.7
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
9.7
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
9.7
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
9.6
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
9.4
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
9.4
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
9.3
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
9.1
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
9.0
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
8.9
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
8.9
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
8.6
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
8.5
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
8.4
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
8.4
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
8.4
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
8.2
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
8.2
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
8.1
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
8.0
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
7.9
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
7.9
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
7.9
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
7.8
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
7.8
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
7.7
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
7.7
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
7.6
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
7.6
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
7.4
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
7.4
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
7.4
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
7.3
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
7.2
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
7.0
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
6.8
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
6.8
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
6.8
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
6.7
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
6.5
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
6.5
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
6.4
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
6.3
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
6.3
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
6.3
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
6.1
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
6.0
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
5.9
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
5.8
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
5.8
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
5.7
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
5.4
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
5.3
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
5.2
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
5.2
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
5.0
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
5.0
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
4.9
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
4.7
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
4.7
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
4.7
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
4.4
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
4.2
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
4.1
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
4.1
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
4.0
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
3.9
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
3.8
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
3.4
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
3.3
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
3.3
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
3.2
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
3.1
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
3.1
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
3.0
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
3.0
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
2.9
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
2.9
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
2.6
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
2.5
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
2.3
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
2.1
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
2.1
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
1.9
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
1.8
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
1.8
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
1.8
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
1.8
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
1.8
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
1.7
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
1.7
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
1.4
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
1.3
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
0.8
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
0.8
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
0.6
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
0.5
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
0.4
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
0.4
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
0.3
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
TLR3 is validated prognostic, high expression is favorable in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
64.1
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
182.2
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
176.4
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
147.2
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
133.3
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
129.1
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
128.7
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
125.9
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
124.6
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
124.6
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
114.7
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
109.1
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
108.7
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
108.5
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
105.1
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
104.8
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
101.8
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
99.4
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
98.4
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
97.9
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
97.6
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
96.6
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
96.5
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
96.4
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
92.6
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
91.8
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
89.5
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
89.2
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
88.3
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
87.3
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
86.0
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
85.9
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
85.8
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
82.7
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
81.5
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
79.0
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
78.9
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
78.6
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
76.6
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
75.2
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
73.8
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
73.2
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
71.7
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
69.6
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
68.5
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
68.4
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
68.3
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
67.7
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
67.0
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
64.7
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
61.9
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
61.7
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
60.5
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
60.0
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
58.4
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
57.4
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
55.8
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
55.6
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
54.5
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
54.4
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
54.3
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
52.7
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
52.6
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
48.5
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
48.2
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
46.3
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
46.0
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
43.1
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
41.6
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
41.4
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
40.9
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
40.8
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
40.4
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
34.4
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
32.4
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
29.6
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
28.1
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
27.5
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
25.7
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
25.0
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
25.0
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
23.8
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
23.1
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
22.8
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
21.8
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
20.2
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
19.0
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
16.6
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
12.1
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
11.9
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
11.7
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
11.6
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
10.4
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
10.3
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
9.4
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
8.8
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
6.2
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
6.0
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
5.7
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
5.5
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
TLR3 is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
6.6
Number of samples
282
Samples
Sample
Description
TPM
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
96.1
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
42.8
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
32.8
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
29.3
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
28.2
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
25.8
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
25.5
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
24.8
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
22.9
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
21.5
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
19.6
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
17.9
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
17.8
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
17.2
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
17.1
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
17.1
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
16.9
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
16.9
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
16.2
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
16.2
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
16.0
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
15.5
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
15.1
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
15.0
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
14.6
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
14.4
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
14.3
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
14.1
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
14.0
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
13.6
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
13.1
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
13.1
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
13.1
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
12.9
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
12.9
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
12.4
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
12.3
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
12.3
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
12.2
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
12.0
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
11.9
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
11.5
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
11.5
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
11.4
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
11.2
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
11.1
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
11.1
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
10.9
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
10.9
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
10.8
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
10.7
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
10.3
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
10.3
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
10.2
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
10.1
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
9.9
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
9.8
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
9.7
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
9.6
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
9.6
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
9.6
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
9.6
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
9.6
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
9.5
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
9.4
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
9.4
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
9.3
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
9.3
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
9.1
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
9.0
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
8.5
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
8.4
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
8.3
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
8.3
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
8.2
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
8.0
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
7.9
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
7.8
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
7.8
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
7.7
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
7.6
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
7.5
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
7.4
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
7.4
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
7.4
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
7.4
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
7.3
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
7.3
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
7.3
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
7.2
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
7.2
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
7.1
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
7.1
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
6.9
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
6.9
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
6.9
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
6.8
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
6.8
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
6.8
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
6.7
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
6.7
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
6.7
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
6.6
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
6.6
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
6.5
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
6.4
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
6.3
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
6.3
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
6.3
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
6.2
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
6.1
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
6.1
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
6.0
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
6.0
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
6.0
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
6.0
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
5.9
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
5.9
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
5.9
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
5.8
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
5.8
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
5.7
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
5.6
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
5.6
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
5.5
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
5.5
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
5.5
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
5.4
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
5.3
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
5.3
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
5.3
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
5.2
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
5.2
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
5.1
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
5.0
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
5.0
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
5.0
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
4.8
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
4.8
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
4.6
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
4.4
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
4.4
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
4.4
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
4.4
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
4.3
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
4.3
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
4.2
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
4.2
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
4.2
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
4.1
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
4.1
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
3.9
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
3.9
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
3.9
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
3.8
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
3.8
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
3.8
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
3.8
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
3.7
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
3.7
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
3.7
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
3.7
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
3.7
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
3.6
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
3.6
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
3.6
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
3.6
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
3.5
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
3.5
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
3.4
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
3.4
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
3.4
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
3.4
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
3.4
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
3.4
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
3.3
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
3.3
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
3.3
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
3.3
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
3.3
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
3.3
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
3.3
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
3.3
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
3.2
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
3.2
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
3.2
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
3.1
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
3.0
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
3.0
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
3.0
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
2.9
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
2.8
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
2.8
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
2.7
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
2.7
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
2.7
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
2.7
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
2.7
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
2.7
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
2.6
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
2.6
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
2.6
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
2.6
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
2.5
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
2.5
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
2.5
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
2.4
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
2.4
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
2.4
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
2.3
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
2.3
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
2.3
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
2.3
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
2.3
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
2.2
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
2.2
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
2.2
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
2.2
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
2.2
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
2.2
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
2.1
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
2.1
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
2.1
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
2.0
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
2.0
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
2.0
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
1.9
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
1.9
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
1.9
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
1.9
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
1.8
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
1.8
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
1.8
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
1.8
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
1.8
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
1.7
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
1.7
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
1.7
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
1.7
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
1.6
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
1.6
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
1.5
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
1.5
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
1.5
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
1.4
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
1.4
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
1.4
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
1.4
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
1.4
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
1.4
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
1.3
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
1.3
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
1.3
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
1.2
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
1.2
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
1.2
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
1.1
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
1.1
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
1.1
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
1.1
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
1.1
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
1.0
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
1.0
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
0.9
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
0.9
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
0.9
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
0.8
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
0.8
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
0.7
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
0.7
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
0.6
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
0.6
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
0.6
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
0.5
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
0.4
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
0.4
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
0.2
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
0.0
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
0.0
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
0.0
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
0.0
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
0.0
Show allShow less
RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0007320003
Tumor
1.8
CPT0000640003
Tumor
1.8
CPT0065430003
Tumor
1.7
CPT0086950003
Tumor
1.5
CPT0092160003
Tumor
1.4
CPT0010110003
Tumor
1.3
CPT0088480003
Tumor
1.2
CPT0088900003
Tumor
1.2
CPT0088690003
Tumor
1.2
CPT0064370003
Tumor
1.2
CPT0014450004
Tumor
1.2
CPT0012550003
Tumor
1.1
CPT0011410003
Tumor
1.1
CPT0086820003
Tumor
1.1
CPT0078830003
Tumor
1.0
CPT0078800003
Tumor
1.0
CPT0001220008
Tumor
1.0
CPT0019130003
Tumor
0.9
CPT0086360003
Tumor
0.9
CPT0001500009
Tumor
0.8
CPT0024670003
Tumor
0.8
CPT0065750003
Tumor
0.8
CPT0025050003
Tumor
0.8
CPT0023350003
Tumor
0.8
CPT0079230003
Tumor
0.8
CPT0079380003
Tumor
0.8
CPT0000870016
Tumor
0.8
CPT0001540009
Tumor
0.7
CPT0015810003
Tumor
0.7
CPT0012280003
Tumor
0.7
CPT0086870003
Tumor
0.7
CPT0089020003
Tumor
0.7
CPT0026410003
Tumor
0.7
CPT0069000003
Tumor
0.7
CPT0063320003
Tumor
0.7
CPT0071150004
Tumor
0.7
CPT0077310003
Tumor
0.6
CPT0079480003
Tumor
0.6
CPT0010160003
Tumor
0.6
CPT0025230003
Tumor
0.6
CPT0006630003
Tumor
0.6
CPT0012670003
Tumor
0.6
CPT0020120003
Tumor
0.6
CPT0077110003
Tumor
0.6
CPT0006900003
Tumor
0.6
CPT0086030003
Tumor
0.5
CPT0092290003
Tumor
0.5
CPT0009060003
Tumor
0.5
CPT0015730003
Tumor
0.5
CPT0078990003
Tumor
0.4
CPT0078930003
Tumor
0.4
CPT0002350011
Tumor
0.4
CPT0006440003
Tumor
0.4
CPT0065930003
Tumor
0.4
CPT0085670003
Tumor
0.4
CPT0025110003
Tumor
0.4
CPT0088630003
Tumor
0.4
CPT0065690003
Tumor
0.4
CPT0021240003
Tumor
0.3
CPT0081880003
Tumor
0.3
CPT0079410003
Tumor
0.3
CPT0065810003
Tumor
0.3
CPT0065870003
Tumor
0.3
CPT0025290003
Tumor
0.3
CPT0012080003
Tumor
0.3
CPT0081600003
Tumor
0.3
CPT0092730003
Tumor
0.3
CPT0025350003
Tumor
0.3
CPT0075130003
Tumor
0.3
CPT0087040003
Tumor
0.3
CPT0076330003
Tumor
0.3
CPT0023690003
Tumor
0.3
CPT0066470004
Tumor
0.2
CPT0012370003
Tumor
0.2
CPT0025580004
Tumor
0.2
CPT0019990003
Tumor
0.2
CPT0092790003
Tumor
0.2
CPT0014160003
Tumor
0.2
CPT0009000003
Tumor
0.2
CPT0017850003
Tumor
0.1
CPT0001340003
Tumor
0.1
CPT0078510003
Tumor
0.1
CPT0089460004
Tumor
0.1
CPT0077490003
Tumor
0.1
CPT0084590001
Normal
0.1
CPT0088760003
Tumor
0.1
CPT0015910003
Tumor
0.0
CPT0000780007
Tumor
0.0
CPT0012180003
Tumor
0.0
CPT0069160003
Tumor
0.0
CPT0079270003
Tumor
0.0
CPT0012900004
Tumor
-0.1
CPT0007860003
Tumor
-0.1
CPT0066480003
Tumor
-0.1
CPT0025880003
Tumor
-0.1
CPT0012640003
Normal
-0.2
CPT0084560003
Tumor
-0.2
CPT0075720003
Tumor
-0.2
CPT0075560003
Tumor
-0.3
CPT0014370004
Tumor
-0.3
CPT0088640003
Normal
-0.3
CPT0001230001
Normal
-0.3
CPT0001260009
Tumor
-0.3
CPT0001510001
Normal
-0.3
CPT0081990003
Tumor
-0.4
CPT0006530001
Normal
-0.4
CPT0025170003
Tumor
-0.4
CPT0010170001
Normal
-0.4
CPT0088970003
Tumor
-0.4
CPT0088710001
Normal
-0.4
CPT0001350001
Normal
-0.4
CPT0063630003
Tumor
-0.4
CPT0088500001
Normal
-0.4
CPT0063640001
Normal
-0.4
CPT0018250001
Normal
-0.4
CPT0065450001
Normal
-0.4
CPT0088570001
Normal
-0.4
CPT0075570001
Normal
-0.4
CPT0010120001
Normal
-0.4
CPT0001550001
Normal
-0.5
CPT0078940001
Normal
-0.5
CPT0007470001
Normal
-0.5
CPT0069190001
Normal
-0.5
CPT0002370001
Normal
-0.5
CPT0001180009
Tumor
-0.5
CPT0017410003
Tumor
-0.5
CPT0023710001
Normal
-0.5
CPT0017450001
Normal
-0.6
CPT0089040001
Normal
-0.6
CPT0092190003
Normal
-0.6
CPT0000660001
Normal
-0.6
CPT0077500001
Normal
-0.6
CPT0086890003
Normal
-0.6
CPT0086970003
Normal
-0.6
CPT0077320001
Normal
-0.6
CPT0069010001
Normal
-0.6
CPT0006730001
Normal
-0.6
CPT0026420001
Normal
-0.6
CPT0088920001
Normal
-0.6
CPT0007870001
Normal
-0.6
CPT0001190001
Normal
-0.6
CPT0078670001
Normal
-0.6
CPT0086830003
Normal
-0.6
CPT0082010001
Normal
-0.6
CPT0020130001
Normal
-0.6
CPT0064400001
Normal
-0.6
CPT0078840001
Normal
-0.6
CPT0079300001
Normal
-0.7
CPT0078530001
Normal
-0.7
CPT0000890001
Normal
-0.7
CPT0014350001
Normal
-0.7
CPT0076350001
Normal
-0.7
CPT0079510001
Normal
-0.7
CPT0000790001
Normal
-0.7
CPT0063330001
Normal
-0.7
CPT0012090003
Normal
-0.7
CPT0066430001
Normal
-0.7
CPT0011240003
Tumor
-0.7
CPT0012920003
Normal
-0.7
CPT0088780001
Normal
-0.8
CPT0092740003
Normal
-0.8
CPT0089480003
Normal
-0.8
CPT0009080003
Normal
-0.8
CPT0014130001
Normal
-0.8
CPT0079430001
Normal
-0.9
CPT0025920001
Normal
-0.9
CPT0002270011
Tumor
-0.9
CPT0014470001
Normal
-0.9
CPT0019160001
Normal
-0.9
CPT0092310003
Normal
-0.9
CPT0012570003
Normal
-0.9
CPT0081620001
Normal
-0.9
CPT0024680001
Normal
-1.0
CPT0092800003
Normal
-1.0
CPT0078660003
Tumor
-1.0
CPT0009020003
Normal
-1.0
CPT0065820001
Normal
-1.0
CPT0012290003
Normal
-1.0
CPT0086370003
Normal
-1.0
CPT0020020001
Normal
-1.0
CPT0077140001
Normal
-1.0
CPT0023360001
Normal
-1.0
CPT0025610001
Normal
-1.1
CPT0087050003
Normal
-1.1
CPT0013790003
Normal
-1.1
CPT0079000001
Normal
-1.2
CPT0066520001
Normal
-1.2
CPT0025060001
Normal
-1.2
CPT0006950001
Normal
-1.2
CPT0075170001
Normal
-1.3
CPT0088550004
Tumor
-1.3
CPT0001270001
Normal
-1.3
CPT0012770003
Normal
-1.4
CPT0079180003
Tumor
-1.4
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
