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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SPINK1 is not prognostic in Liver Hepatocellular Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
1275.5
Number of samples
362
Samples
Sample
Description
TPM
TCGA-CC-5259-01A
0 years, female, asian, stage:Stage IIIC, alive, 250 days
13229.2
TCGA-DD-A3A3-01A
0 years, male, asian, stage:Stage I, dead, 535 days
12624.2
TCGA-DD-AADQ-01A
0 years, male, asian, stage:Stage II, alive, 436 days
12159.3
TCGA-DD-AAED-01A
0 years, male, asian, stage:Stage I, alive, 763 days
10564.8
TCGA-KR-A7K7-01A
0 years, female, white, stage:Stage II, alive, 951 days
9509.7
TCGA-CC-A9FW-01A
0 years, male, asian, stage:Stage IIIA, alive, 248 days
8804.9
TCGA-G3-A3CG-01A
0 years, male, white, stage:Stage I, alive, 673 days
8758.0
TCGA-ZP-A9D1-01A
0 years, female, white, stage:'--, alive, 21 days
8510.0
TCGA-DD-AAD2-01A
0 years, male, asian, stage:Stage I, alive, 658 days
7843.6
TCGA-2Y-A9HB-01A
0 years, male, stage:Stage I, alive, 260 days
7450.0
TCGA-PD-A5DF-01A
0 years, female, white, stage:Stage IIIB, dead, 639 days
7382.2
TCGA-BC-A216-01A
0 years, female, white, stage:Stage IIIA, alive, 1351 days
7167.3
TCGA-DD-AAEG-01A
0 years, female, asian, stage:Stage I, alive, 719 days
6474.6
TCGA-DD-AADC-01A
0 years, male, asian, stage:Stage I, dead, 425 days
6250.4
TCGA-DD-AADK-01A
0 years, female, asian, stage:Stage II, alive, 1049 days
6047.4
TCGA-5C-A9VH-01A
0 years, male, white, stage:Stage I, alive, 322 days
5898.0
TCGA-DD-A1EC-01A
0 years, female, white, stage:Stage I, alive, 602 days
5601.2
TCGA-DD-AACI-01A
0 years, male, asian, stage:Stage II, alive, 1618 days
5561.4
TCGA-WQ-AB4B-01A
0 years, male, white, stage:Stage II, alive, 395 days
5434.6
TCGA-DD-A39W-01A
0 years, female, white, stage:Stage III, dead, 827 days
5317.5
TCGA-DD-A4NH-01A
0 years, female, white, stage:Stage IIIB, alive, 917 days
5299.5
TCGA-DD-AACT-01A
0 years, female, asian, stage:Stage I, alive, 1562 days
5162.9
TCGA-DD-AAVV-01A
0 years, male, asian, stage:Stage II, alive, 2455 days
5152.0
TCGA-DD-AAVZ-01A
0 years, male, asian, stage:Stage I, alive, 1900 days
5138.8
TCGA-G3-A25S-01A
0 years, male, white, stage:Stage I, dead, 416 days
5133.9
TCGA-FV-A2QQ-01A
0 years, male, white, stage:Stage I, alive, 729 days
5123.2
TCGA-BD-A3EP-01A
0 years, female, black or african american, stage:Stage I, alive, 409 days
4924.1
TCGA-DD-AACG-01A
0 years, male, asian, stage:Stage II, dead, 469 days
4915.7
TCGA-DD-A39Z-01A
0 years, female, stage:Stage II, dead, 601 days
4905.9
TCGA-RC-A6M6-01A
0 years, male, white, stage:Stage II, alive, 9 days
4885.5
TCGA-DD-AADJ-01A
0 years, female, asian, stage:Stage I, alive, 1066 days
4496.4
TCGA-DD-A1EG-01A
0 years, male, white, stage:Stage I, dead, 1372 days
4455.7
TCGA-DD-AACP-01A
0 years, male, asian, stage:Stage I, alive, 415 days
4307.6
TCGA-DD-AADO-01A
0 years, male, asian, stage:Stage I, alive, 453 days
4203.1
TCGA-DD-A1EI-01A
0 years, male, asian, stage:Stage I, alive, 183 days
4166.1
TCGA-DD-A3A7-01A
0 years, male, stage:Stage IIIB, dead, 419 days
4158.0
TCGA-ZP-A9CV-01A
0 years, male, white, stage:'--, dead, 1088 days
4135.3
TCGA-DD-A39V-01A
0 years, male, white, stage:Stage II, dead, 643 days
4082.5
TCGA-DD-AACH-01A
0 years, male, asian, stage:Stage II, dead, 195 days
4070.3
TCGA-CC-A7II-01A
0 years, male, asian, stage:Stage IIIA, alive, 399 days
3847.3
TCGA-DD-AACL-01A
0 years, female, asian, stage:Stage I, dead, 107 days
3776.3
TCGA-UB-A7MA-01A
0 years, female, white, stage:Stage II, alive, 848 days
3538.9
TCGA-2Y-A9GW-01A
0 years, male, white, stage:Stage I, dead, 1271 days
3302.6
TCGA-DD-A4NR-01A
0 years, female, white, stage:Stage I, dead, 9 days
3296.5
TCGA-EP-A3JL-01A
0 years, male, white, stage:Stage I, alive, 303 days
3279.7
TCGA-CC-5264-01A
0 years, male, asian, stage:Stage IIIA, dead, 102 days
3277.0
TCGA-EP-A3RK-01A
0 years, male, white, stage:Stage IIIA, alive, 363 days
3179.3
TCGA-CC-5263-01A
0 years, male, asian, stage:Stage IIIA, dead, 129 days
2902.4
TCGA-HP-A5N0-01A
0 years, female, stage:'--, dead, 752 days
2878.1
TCGA-DD-A4NA-01A
0 years, female, white, stage:Stage IIIC, alive, 1008 days
2858.4
TCGA-2Y-A9H1-01A
0 years, male, white, stage:Stage I, dead, 1229 days
2829.4
TCGA-DD-AAC9-01A
0 years, male, asian, stage:Stage I, alive, 347 days
2675.6
TCGA-LG-A9QD-01A
0 years, male, white, stage:Stage IIIA, alive, 366 days
2650.6
TCGA-2Y-A9H5-01A
0 years, female, white, stage:Stage I, dead, 555 days
2587.7
TCGA-CC-A1HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 101 days
2564.9
TCGA-DD-A4NL-01A
0 years, male, white, stage:Stage I, alive, 1711 days
2543.9
TCGA-DD-AADP-01A
0 years, male, asian, stage:Stage I, alive, 458 days
2539.1
TCGA-EP-A2KA-01A
0 years, female, white, stage:Stage IIIA, dead, 627 days
2533.5
TCGA-GJ-A3OU-01A
0 years, male, white, stage:Stage I, alive, 879 days
2529.1
TCGA-2Y-A9H7-01A
0 years, female, white, stage:Stage I, alive, 1168 days
2499.7
TCGA-MI-A75I-01A
0 years, male, black or african american, stage:'--, alive, 630 days
2475.0
TCGA-K7-AAU7-01A
0 years, male, white, stage:Stage II, alive, 359 days
2454.7
TCGA-G3-AAV0-01A
0 years, male, asian, stage:Stage I, alive, 476 days
2435.3
TCGA-DD-A4NQ-01A
0 years, male, white, stage:Stage II, dead, 373 days
2435.0
TCGA-CC-A8HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 140 days
2419.7
TCGA-CC-A3MB-01A
0 years, male, asian, stage:Stage IIIA, dead, 315 days
2406.9
TCGA-HP-A5MZ-01A
0 years, male, stage:Stage I, dead, 91 days
2387.9
TCGA-ZS-A9CD-01A
0 years, male, white, stage:Stage II, dead, 1386 days
2344.7
TCGA-DD-AACK-01A
0 years, male, asian, stage:Stage I, alive, 9 days
2344.5
TCGA-G3-AAV6-01A
0 years, female, white, stage:Stage IIIA, dead, 65 days
2328.5
TCGA-G3-A5SJ-01A
0 years, male, white, stage:Stage I, alive, 698 days
2313.2
TCGA-BC-A10S-01A
0 years, male, white, stage:'--, dead, 1423 days
2281.7
TCGA-DD-AACZ-01A
0 years, female, asian, stage:Stage I, dead, 171 days
2209.8
TCGA-BD-A3ER-01A
0 years, male, white, stage:Stage II, alive, 1115 days
2199.1
TCGA-DD-AADM-01A
0 years, male, asian, stage:Stage II, dead, 12 days
2179.0
TCGA-CC-5262-01A
0 years, male, asian, stage:Stage IIIC, dead, 103 days
2142.6
TCGA-BC-A10W-01A
0 years, male, asian, stage:'--, dead, 91 days
2121.1
TCGA-BC-A112-01A
0 years, male, white, stage:'--, dead, 153 days
2052.2
TCGA-BC-A10U-01A
0 years, male, white, stage:'--, dead, 837 days
2037.4
TCGA-G3-A25X-01A
0 years, male, asian, stage:Stage II, alive, 1779 days
2018.8
TCGA-KR-A7K2-01A
0 years, male, white, stage:Stage I, alive, 829 days
1981.6
TCGA-DD-AACD-01A
0 years, male, asian, stage:Stage I, dead, 381 days
1958.1
TCGA-DD-A4ND-01A
0 years, female, white, stage:Stage I, alive, 2746 days
1937.9
TCGA-XR-A8TG-01A
0 years, male, white, stage:Stage I, alive, 898 days
1912.3
TCGA-DD-AADI-01A
0 years, female, asian, stage:Stage I, alive, 1085 days
1880.2
TCGA-FV-A3I1-01A
0 years, female, white, stage:Stage II, dead, 247 days
1850.1
TCGA-DD-AADY-01A
0 years, female, asian, stage:Stage I, alive, 555 days
1685.2
TCGA-BC-A69H-01A
0 years, male, white, stage:Stage II, alive, 444 days
1660.0
TCGA-DD-AACO-01A
0 years, male, asian, stage:Stage I, alive, 1876 days
1621.3
TCGA-ED-A7XP-01A
0 years, female, asian, stage:Stage II, alive, 400 days
1603.2
TCGA-DD-AACB-01A
0 years, female, asian, stage:Stage I, alive, 2324 days
1591.9
TCGA-GJ-A9DB-01A
0 years, male, white, stage:Stage I, dead, 67 days
1562.5
TCGA-CC-A5UC-01A
0 years, male, asian, stage:Stage IIIA, dead, 347 days
1556.3
TCGA-DD-A39Y-01A
0 years, male, asian, stage:Stage I, dead, 171 days
1555.7
TCGA-XR-A8TF-01A
0 years, male, white, stage:Stage I, dead, 693 days
1545.6
TCGA-DD-AACY-01A
0 years, male, asian, stage:Stage I, alive, 1450 days
1516.3
TCGA-ED-A7PZ-01A
0 years, male, asian, stage:Stage II, alive, 6 days
1488.9
TCGA-DD-AAEE-01A
0 years, male, asian, stage:Stage I, alive, 810 days
1470.0
TCGA-CC-A123-01A
0 years, female, asian, stage:Stage IIIA, alive, 219 days
1418.6
TCGA-ED-A7PX-01A
0 years, female, asian, stage:Stage II, alive, 6 days
1410.0
TCGA-O8-A75V-01A
0 years, male, stage:Stage I, alive, 538 days
1409.1
TCGA-BC-A3KG-01A
0 years, female, white, stage:Stage II, alive, 680 days
1380.6
TCGA-CC-5258-01A
0 years, male, asian, stage:Stage II, dead, 129 days
1374.5
TCGA-ED-A8O6-01A
0 years, female, asian, stage:Stage IIIA, dead, 56 days
1309.4
TCGA-DD-AAD1-01A
0 years, female, asian, stage:Stage I, alive, 564 days
1307.0
TCGA-DD-A1ED-01A
0 years, male, white, stage:Stage I, alive, 2301 days
1281.1
TCGA-RC-A7S9-01A
0 years, female, asian, stage:Stage I, alive, 640 days
1273.3
TCGA-DD-A73F-01A
0 years, female, white, stage:Stage I, alive, 1085 days
1235.6
TCGA-ZP-A9CY-01A
0 years, female, white, stage:'--, alive, 782 days
1229.4
TCGA-DD-AAVQ-01A
0 years, male, asian, stage:Stage I, alive, 2728 days
1203.9
TCGA-CC-A8HV-01A
0 years, female, asian, stage:Stage II, dead, 279 days
1187.8
TCGA-G3-A7M9-01A
0 years, male, white, stage:Stage IIIB, dead, 56 days
1179.0
TCGA-ES-A2HT-01A
0 years, male, black or african american, stage:Stage I, dead, 438 days
1163.6
TCGA-GJ-A6C0-01A
0 years, female, white, stage:Stage II, dead, 31 days
1118.9
TCGA-DD-AAE0-01A
0 years, female, asian, stage:Stage IIIA, alive, 555 days
1116.6
TCGA-DD-A114-01A
0 years, male, black or african american, stage:Stage II, dead, 1149 days
1102.3
TCGA-G3-A5SM-01A
0 years, male, white, stage:Stage II, alive, 520 days
1067.6
TCGA-UB-A7MC-01A
0 years, male, white, stage:Stage IIIA, alive, 500 days
1062.8
TCGA-FV-A4ZP-01A
0 years, male, white, stage:Stage IIIA, dead, 2486 days
1043.7
TCGA-G3-AAV7-01A
0 years, male, asian, stage:Stage II, alive, 361 days
1042.1
TCGA-2Y-A9H0-01A
0 years, male, white, stage:Stage IIIA, alive, 3675 days
1031.5
TCGA-WX-AA44-01A
0 years, female, white, stage:Stage I, alive, 615 days
1010.8
TCGA-K7-A6G5-01A
0 years, male, white, stage:Stage I, alive, 512 days
995.9
TCGA-DD-A3A1-01A
0 years, male, stage:Stage IIIA, dead, 233 days
992.5
TCGA-UB-A7MD-01A
0 years, male, black or african american, stage:Stage I, dead, 52 days
983.3
TCGA-WX-AA47-01A
0 years, female, white, stage:Stage IIIA, dead, 556 days
964.5
TCGA-DD-A4NE-01A
0 years, female, white, stage:Stage IIIA, dead, 660 days
956.4
TCGA-FV-A496-01A
0 years, female, white, stage:Stage I, alive, 10 days
941.6
TCGA-DD-A73G-01A
0 years, female, white, stage:Stage I, alive, 3478 days
896.1
TCGA-FV-A495-01A
0 years, female, white, stage:Stage II, alive, 1 days
867.1
TCGA-G3-A7M7-01A
0 years, male, white, stage:Stage I, alive, 361 days
847.7
TCGA-DD-A4NN-01A
0 years, female, white, stage:Stage I, dead, 899 days
845.4
TCGA-DD-A113-01A
0 years, female, white, stage:Stage II, alive, 2425 days
842.9
TCGA-LG-A6GG-01A
0 years, female, white, stage:Stage II, alive, 387 days
830.5
TCGA-T1-A6J8-01A
0 years, male, white, stage:'--, alive, 23 days
827.2
TCGA-CC-A7IG-01A
0 years, male, asian, stage:Stage II, dead, 299 days
825.6
TCGA-DD-AAE7-01A
0 years, male, asian, stage:Stage I, alive, 644 days
821.9
TCGA-BC-A5W4-01A
0 years, male, white, stage:Stage IIIA, dead, 547 days
808.6
TCGA-DD-A4NP-01A
0 years, male, white, stage:Stage I, alive, 3308 days
806.0
TCGA-DD-AACU-01A
0 years, male, asian, stage:Stage I, alive, 1567 days
799.1
TCGA-ED-A66X-01A
0 years, male, asian, stage:Stage IIIA, alive, 406 days
798.7
TCGA-DD-A1EL-01A
0 years, male, black or african american, stage:Stage II, dead, 415 days
789.0
TCGA-DD-AAD3-01A
0 years, male, asian, stage:Stage I, alive, 1295 days
748.6
TCGA-DD-AAVX-01A
0 years, male, asian, stage:Stage II, alive, 1718 days
743.9
TCGA-CC-A3MC-01A
0 years, male, asian, stage:Stage IIIA, alive, 363 days
737.1
TCGA-DD-AADR-01A
0 years, male, asian, stage:Stage I, alive, 2028 days
718.2
TCGA-2Y-A9GV-01A
0 years, female, white, stage:Stage I, dead, 2532 days
713.3
TCGA-DD-A1EK-01A
0 years, female, white, stage:Stage IVB, dead, 558 days
652.3
TCGA-DD-AAD8-01A
0 years, female, asian, stage:Stage I, alive, 1219 days
646.1
TCGA-ED-A97K-01A
0 years, male, asian, stage:Stage IIIA, alive, 6 days
633.4
TCGA-DD-AAW0-01A
0 years, male, asian, stage:Stage I, alive, 2015 days
629.0
TCGA-RC-A7SF-01A
0 years, male, asian, stage:Stage I, alive, 579 days
605.1
TCGA-DD-AACF-01A
0 years, male, asian, stage:Stage I, dead, 365 days
590.6
TCGA-4R-AA8I-01A
0 years, male, white, stage:Stage II, dead, 262 days
585.4
TCGA-DD-AADL-01A
0 years, male, asian, stage:Stage I, alive, 636 days
583.9
TCGA-ZP-A9CZ-01A
0 years, male, asian, stage:'--, alive, 706 days
525.6
TCGA-UB-AA0U-01A
0 years, male, white, stage:Stage II, alive, 327 days
523.5
TCGA-2Y-A9H8-01A
0 years, female, white, stage:'--, dead, 633 days
514.6
TCGA-CC-5261-01A
0 years, male, asian, stage:Stage II, dead, 97 days
501.4
TCGA-DD-AADB-01A
0 years, male, asian, stage:Stage I, alive, 1242 days
494.0
TCGA-DD-AACQ-01A
0 years, male, asian, stage:Stage II, dead, 432 days
474.8
TCGA-5C-AAPD-01A
0 years, male, asian, stage:Stage II, alive, 20 days
474.1
TCGA-DD-AADN-01A
0 years, male, asian, stage:Stage I, alive, 898 days
462.3
TCGA-DD-A1EE-01A
0 years, male, white, stage:Stage IIIA, dead, 349 days
451.3
TCGA-G3-A25V-01A
0 years, male, white, stage:Stage I, alive, 860 days
448.4
TCGA-FV-A4ZQ-01A
0 years, male, white, stage:Stage I, alive, 12 days
430.4
TCGA-ED-A5KG-01A
0 years, female, asian, stage:Stage II, alive, 854 days
429.5
TCGA-G3-A25Y-01A
0 years, female, asian, stage:Stage I, dead, 452 days
427.8
TCGA-DD-A115-01A
0 years, male, white, stage:Stage IIIA, dead, 2542 days
410.3
TCGA-BD-A2L6-01A
0 years, male, white, stage:'--, alive, 1363 days
387.1
TCGA-DD-A4NS-01A
0 years, female, white, stage:Stage I, dead, 2456 days
378.4
TCGA-CC-A8HS-01A
0 years, male, asian, stage:Stage IIIC, dead, 300 days
373.4
TCGA-YA-A8S7-01A
0 years, male, white, stage:Stage IIIA, dead, 412 days
350.6
TCGA-K7-A5RG-01A
0 years, male, black or african american, stage:Stage I, alive, 519 days
337.9
TCGA-DD-AADD-01A
0 years, male, asian, stage:Stage I, alive, 1231 days
315.1
TCGA-KR-A7K0-01A
0 years, male, white, stage:Stage I, dead, 65 days
305.5
TCGA-ZP-A9D2-01A
0 years, male, white, stage:'--, dead, 765 days
305.4
TCGA-CC-A5UE-01A
0 years, male, asian, stage:Stage IIIB, dead, 272 days
294.7
TCGA-BW-A5NO-01A
0 years, male, black or african american, stage:Stage IIIA, alive, 20 days
294.0
TCGA-2Y-A9HA-01A
0 years, male, white, stage:Stage II, dead, 36 days
275.8
TCGA-DD-A1EJ-01A
0 years, female, white, stage:Stage IIIC, dead, 1005 days
273.9
TCGA-DD-AAW3-01A
0 years, male, asian, stage:Stage I, alive, 1633 days
271.3
TCGA-MI-A75E-01A
0 years, male, white, stage:Stage IIIC, alive, 507 days
264.3
TCGA-BC-A10R-01A
0 years, female, white, stage:'--, dead, 308 days
258.1
TCGA-2Y-A9GS-01A
0 years, male, white, stage:'--, dead, 724 days
244.2
TCGA-BC-A10T-01A
0 years, male, white, stage:'--, dead, 837 days
241.2
TCGA-UB-A7MB-01A
0 years, male, white, stage:Stage II, alive, 601 days
240.3
TCGA-DD-AAVP-01A
0 years, male, asian, stage:Stage I, alive, 2752 days
235.9
TCGA-DD-AAD5-01A
0 years, male, asian, stage:Stage I, alive, 1345 days
234.9
TCGA-BC-A217-01A
0 years, female, white, stage:Stage II, dead, 1397 days
221.1
TCGA-2Y-A9H3-01A
0 years, male, white, stage:Stage II, alive, 1516 days
220.8
TCGA-BC-A10X-01A
0 years, female, white, stage:Stage IIIA, dead, 770 days
209.8
TCGA-DD-AAE1-01A
0 years, male, asian, stage:Stage I, alive, 552 days
209.0
TCGA-QA-A7B7-01A
0 years, male, black or african american, stage:Stage II, alive, 94 days
207.2
TCGA-DD-A11D-01A
0 years, female, white, stage:Stage I, dead, 1560 days
200.5
TCGA-ED-A459-01A
0 years, male, asian, stage:Stage II, alive, 910 days
189.7
TCGA-DD-AACS-01A
0 years, male, asian, stage:Stage I, alive, 1804 days
181.0
TCGA-3K-AAZ8-01A
0 years, male, black or african american, stage:Stage IIIB, alive, 396 days
175.0
TCGA-FV-A2QR-01A
0 years, male, white, stage:Stage I, dead, 581 days
173.8
TCGA-BC-A110-01A
0 years, female, black or african american, stage:'--, dead, 2116 days
171.9
TCGA-2Y-A9H9-01A
0 years, male, white, stage:Stage I, alive, 697 days
162.9
TCGA-DD-AADA-01A
0 years, female, asian, stage:Stage I, alive, 1233 days
162.7
TCGA-DD-A73A-01A
0 years, male, white, stage:Stage I, alive, 728 days
159.7
TCGA-2Y-A9GZ-01A
0 years, female, white, stage:Stage II, dead, 848 days
152.5
TCGA-G3-A25Z-01A
0 years, male, asian, stage:Stage I, alive, 655 days
143.7
TCGA-FV-A3I0-01A
0 years, female, white, stage:Stage II, alive, 848 days
140.4
TCGA-DD-A119-01A
0 years, male, asian, stage:Stage IV, dead, 223 days
139.4
TCGA-MI-A75C-01A
0 years, male, white, stage:Stage I, alive, 291 days
126.8
TCGA-5R-AAAM-01A
0 years, female, white, stage:Stage II, dead, 46 days
117.2
TCGA-DD-A4NO-01A
0 years, male, white, stage:Stage I, alive, 2245 days
116.9
TCGA-FV-A3R2-01A
0 years, male, white, stage:Stage I, dead, 194 days
116.6
TCGA-2Y-A9GX-01A
0 years, male, white, stage:Stage I, alive, 2442 days
112.7
TCGA-2Y-A9GY-01A
0 years, female, white, stage:Stage II, dead, 757 days
109.5
TCGA-DD-AAD0-01A
0 years, female, asian, stage:Stage I, alive, 137 days
109.5
TCGA-RC-A7SH-01A
0 years, male, asian, stage:Stage II, alive, 468 days
107.3
TCGA-FV-A23B-01A
0 years, female, white, stage:Stage II, dead, 1852 days
105.6
TCGA-DD-AAE2-01A
0 years, male, asian, stage:Stage I, alive, 638 days
97.9
TCGA-G3-A5SI-01A
0 years, male, asian, stage:Stage II, dead, 768 days
97.8
TCGA-ZP-A9D0-01A
0 years, female, black or african american, stage:'--, alive, 1091 days
91.3
TCGA-G3-A3CK-01A
0 years, male, asian, stage:Stage I, alive, 585 days
89.7
TCGA-MI-A75G-01A
0 years, male, white, stage:Stage II, alive, 698 days
87.8
TCGA-DD-AAE9-01A
0 years, male, asian, stage:Stage I, alive, 722 days
81.5
TCGA-2Y-A9H4-01A
0 years, male, black or african american, stage:Stage I, alive, 1452 days
77.8
TCGA-G3-A25T-01A
0 years, female, white, stage:Stage IIIA, alive, 1553 days
77.7
TCGA-MR-A520-01A
0 years, male, white, stage:Stage I, alive, 229 days
72.7
TCGA-KR-A7K8-01A
0 years, male, stage:Stage I, alive, 906 days
61.5
TCGA-WQ-A9G7-01A
0 years, female, white, stage:'--, alive, 30 days
60.3
TCGA-RG-A7D4-01A
0 years, male, black or african american, stage:Stage II, alive, 1098 days
60.0
TCGA-XR-A8TD-01A
0 years, female, white, stage:Stage IIIB, alive, 1030 days
59.8
TCGA-ZS-A9CE-01A
0 years, female, white, stage:Stage II, alive, 1241 days
59.5
TCGA-5C-A9VG-01A
0 years, male, white, stage:Stage II, alive, 328 days
56.6
TCGA-2Y-A9H6-01A
0 years, female, white, stage:Stage I, alive, 357 days
53.3
TCGA-RC-A7SB-01A
0 years, male, asian, stage:Stage II, alive, 588 days
51.3
TCGA-ED-A66Y-01A
0 years, female, asian, stage:Stage IIIA, dead, 296 days
51.2
TCGA-EP-A2KC-01A
0 years, male, black or african american, stage:Stage I, dead, 19 days
50.8
TCGA-5R-AA1D-01A
0 years, female, white, stage:Stage IIIA, alive, 449 days
50.4
TCGA-BC-A69I-01A
0 years, male, white, stage:Stage I, alive, 387 days
49.1
TCGA-ED-A4XI-01A
0 years, male, asian, stage:Stage II, alive, 819 days
46.4
TCGA-DD-AACC-01A
0 years, male, asian, stage:Stage I, dead, 1685 days
41.4
TCGA-G3-A5SK-01A
0 years, male, white, stage:Stage I, alive, 744 days
40.4
TCGA-DD-A4NG-01A
0 years, male, white, stage:Stage IIIA, dead, 802 days
38.8
TCGA-DD-AA3A-01A
0 years, female, white, stage:Stage I, dead, 410 days
38.5
TCGA-UB-A7ME-01A
0 years, male, asian, stage:Stage I, alive, 486 days
38.1
TCGA-DD-AADV-01A
0 years, male, asian, stage:Stage I, alive, 574 days
35.8
TCGA-CC-A9FS-01A
0 years, male, asian, stage:Stage II, alive, 211 days
35.8
TCGA-DD-AAVR-01A
0 years, male, asian, stage:Stage I, alive, 2513 days
35.0
TCGA-DD-AADF-01A
0 years, female, asian, stage:Stage I, dead, 115 days
34.0
TCGA-BC-A10Q-01A
0 years, female, white, stage:'--, dead, 1135 days
33.7
TCGA-BC-A3KF-01A
0 years, female, white, stage:Stage I, alive, 8 days
33.7
TCGA-G3-A3CJ-01A
0 years, male, american indian or alaska native, stage:Stage II, alive, 594 days
33.5
TCGA-ED-A7PY-01A
0 years, female, asian, stage:Stage II, alive, 390 days
32.8
TCGA-DD-A116-01A
0 years, male, asian, stage:Stage IIIA, dead, 1622 days
30.7
TCGA-ZP-A9D4-01A
0 years, female, white, stage:'--, alive, 395 days
29.3
TCGA-DD-AAVS-01A
0 years, male, asian, stage:Stage I, alive, 1823 days
28.9
TCGA-K7-A5RF-01A
0 years, male, white, stage:Stage I, alive, 631 days
28.4
TCGA-WJ-A86L-01A
0 years, female, white, stage:Stage I, alive, 345 days
27.5
TCGA-2Y-A9H2-01A
0 years, female, white, stage:Stage I, alive, 1731 days
27.1
TCGA-DD-A1EH-01A
0 years, male, white, stage:Stage III, alive, 1495 days
26.4
TCGA-ED-A627-01A
0 years, male, white, stage:Stage I, alive, 423 days
25.6
TCGA-CC-A7IH-01A
0 years, male, asian, stage:Stage IIIA, alive, 365 days
22.0
TCGA-CC-A7IE-01A
0 years, male, asian, stage:Stage IIIA, dead, 217 days
20.1
TCGA-LG-A9QC-01A
0 years, male, white, stage:Stage I, alive, 425 days
18.2
TCGA-DD-AAE4-01A
0 years, female, asian, stage:Stage I, alive, 608 days
17.0
TCGA-DD-A4NK-01A
0 years, female, white, stage:Stage IIIA, dead, 1210 days
16.5
TCGA-ED-A7XO-01A
0 years, male, asian, stage:Stage IIIA, alive, 427 days
16.0
TCGA-DD-AADW-01A
0 years, male, asian, stage:Stage I, alive, 587 days
14.9
TCGA-DD-A1EF-01A
0 years, female, white, stage:Stage I, dead, 394 days
14.6
TCGA-CC-5260-01A
0 years, female, asian, stage:Stage IIIC, dead, 87 days
14.3
TCGA-MR-A8JO-01A
0 years, male, white, stage:Stage I, alive, 330 days
14.3
TCGA-RC-A6M5-01A
0 years, female, white, stage:Stage IVA, alive, 15 days
12.6
TCGA-FV-A3R3-01A
0 years, female, white, stage:Stage I, dead, 366 days
12.4
TCGA-DD-AAE6-01A
0 years, female, asian, stage:Stage I, alive, 141 days
11.5
TCGA-DD-AAVW-01A
0 years, male, asian, stage:Stage I, alive, 2317 days
11.4
TCGA-DD-AAEA-01A
0 years, male, asian, stage:Stage I, alive, 575 days
11.0
TCGA-G3-A3CI-01A
0 years, male, white, stage:Stage I, alive, 180 days
10.6
TCGA-DD-A73E-01A
0 years, male, white, stage:Stage I, alive, 44 days
10.0
TCGA-DD-AAEH-01A
0 years, male, asian, stage:Stage I, alive, 784 days
8.8
TCGA-UB-AA0V-01A
0 years, female, white, stage:Stage I, alive, 314 days
8.7
TCGA-DD-A4NJ-01A
0 years, female, white, stage:Stage II, alive, 928 days
8.6
TCGA-G3-AAV3-01A
0 years, female, white, stage:Stage II, alive, 412 days
8.3
TCGA-DD-AAE3-01A
0 years, male, asian, stage:Stage I, alive, 566 days
8.2
TCGA-BC-A8YO-01A
0 years, female, white, stage:Stage IIIC, alive, 562 days
8.1
TCGA-RC-A7SK-01A
0 years, male, asian, stage:Stage I, alive, 472 days
7.5
TCGA-RC-A6M4-01A
0 years, female, white, stage:Stage IIIA, alive, 22 days
7.4
TCGA-DD-AAW1-01A
0 years, male, asian, stage:Stage IIIA, alive, 1989 days
7.4
TCGA-G3-A7M5-01A
0 years, male, asian, stage:Stage I, alive, 447 days
7.3
TCGA-2Y-A9GU-01A
0 years, female, white, stage:Stage I, alive, 1939 days
7.3
TCGA-CC-A5UD-01A
0 years, male, asian, stage:Stage IIIA, dead, 304 days
7.1
TCGA-XR-A8TE-01A
0 years, male, white, stage:Stage IIIA, alive, 925 days
6.4
TCGA-EP-A2KB-01A
0 years, female, white, stage:Stage I, dead, 596 days
6.4
TCGA-DD-AACN-01A
0 years, male, asian, stage:Stage I, alive, 1302 days
5.9
TCGA-2Y-A9GT-01A
0 years, male, white, stage:Stage I, dead, 1624 days
5.9
TCGA-UB-A7MF-01A
0 years, male, white, stage:Stage IIIA, dead, 214 days
5.8
TCGA-G3-A7M6-01A
0 years, female, white, stage:Stage I, alive, 632 days
5.7
TCGA-ZS-A9CF-01A
0 years, male, white, stage:Stage II, alive, 2412 days
5.6
TCGA-DD-AAVU-01A
0 years, male, asian, stage:Stage II, alive, 2202 days
5.6
TCGA-5R-AA1C-01A
0 years, male, white, stage:Stage II, alive, 520 days
5.4
TCGA-DD-A11C-01A
0 years, male, white, stage:Stage I, alive, 662 days
5.3
TCGA-DD-A1EA-01A
0 years, male, asian, stage:Stage II, alive, 2415 days
5.3
TCGA-DD-AAEB-01A
0 years, male, asian, stage:Stage I, alive, 478 days
5.2
TCGA-DD-AACW-01A
0 years, male, asian, stage:Stage I, alive, 1424 days
5.2
TCGA-DD-AADS-01A
0 years, male, asian, stage:Stage I, alive, 474 days
4.5
TCGA-G3-A5SL-01A
0 years, male, white, stage:Stage II, alive, 621 days
4.0
TCGA-DD-A11B-01A
0 years, male, white, stage:Stage I, dead, 14 days
4.0
TCGA-DD-A73C-01A
0 years, female, white, stage:Stage IIIA, alive, 701 days
3.8
TCGA-G3-AAV1-01A
0 years, male, asian, stage:Stage IIIC, dead, 359 days
3.8
TCGA-DD-AADU-01A
0 years, male, asian, stage:Stage II, alive, 554 days
3.8
TCGA-BC-A10Z-01A
0 years, female, white, stage:Stage I, dead, 34 days
3.7
TCGA-DD-AAW2-01A
0 years, male, asian, stage:Stage I, alive, 1855 days
3.6
TCGA-G3-A7M8-01A
0 years, male, asian, stage:Stage I, alive, 430 days
3.3
TCGA-CC-A3M9-01A
0 years, male, asian, stage:Stage IIIA, dead, 300 days
3.2
TCGA-DD-A73D-01A
0 years, female, white, stage:Stage II, alive, 693 days
3.2
TCGA-DD-A4NI-01A
0 years, male, white, stage:Stage II, alive, 816 days
3.0
TCGA-DD-A4NB-01A
0 years, male, white, stage:Stage I, alive, 989 days
3.0
TCGA-DD-A3A8-01A
0 years, male, white, stage:Stage II, dead, 11 days
2.8
TCGA-DD-AACA-01A
0 years, male, asian, stage:Stage I, alive, 2301 days
2.8
TCGA-ED-A82E-01A
0 years, female, asian, stage:Stage IIIA, alive, 408 days
2.7
TCGA-DD-AAD6-01A
0 years, male, asian, stage:Stage IIIA, alive, 672 days
2.7
TCGA-DD-AAC8-01A
0 years, male, asian, stage:Stage I, dead, 16 days
2.4
TCGA-DD-AACX-01A
0 years, male, asian, stage:Stage II, alive, 170 days
2.3
TCGA-DD-A3A2-01A
0 years, female, white, stage:Stage I, dead, 2131 days
2.2
TCGA-ZS-A9CG-01A
0 years, male, white, stage:Stage II, alive, 341 days
2.0
TCGA-DD-A3A5-01A
0 years, female, white, stage:Stage III, dead, 3125 days
2.0
TCGA-DD-AACE-01A
0 years, male, asian, stage:Stage I, alive, 2184 days
1.9
TCGA-DD-A3A4-01A
0 years, male, white, stage:Stage IIIA, dead, 612 days
1.8
TCGA-BC-A10Y-01A
0 years, male, white, stage:'--, dead, 711 days
1.8
TCGA-DD-A39X-01A
0 years, female, white, stage:Stage I, dead, 1694 days
1.7
TCGA-DD-A73B-01A
0 years, female, white, stage:Stage I, dead, 283 days
1.6
TCGA-G3-A6UC-01A
0 years, male, white, stage:Stage IIIB, alive, 671 days
1.6
TCGA-CC-A7IJ-01A
0 years, male, asian, stage:Stage II, alive, 382 days
1.5
TCGA-G3-AAUZ-01A
0 years, male, stage:Stage I, alive, 480 days
1.4
TCGA-ES-A2HS-01A
0 years, male, white, stage:Stage I, dead, 688 days
1.3
TCGA-DD-AAEK-01A
0 years, male, asian, stage:Stage II, alive, 1067 days
1.3
TCGA-DD-AACJ-01A
0 years, male, asian, stage:Stage II, alive, 2102 days
1.2
TCGA-DD-A118-01A
0 years, female, white, stage:Stage II, alive, 3437 days
1.2
TCGA-EP-A12J-01A
0 years, male, black or african american, stage:Stage I, alive, 570 days
1.2
TCGA-XR-A8TC-01A
0 years, female, white, stage:Stage I, alive, 1339 days
1.1
TCGA-DD-AACV-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
1.1
TCGA-NI-A4U2-01A
0 years, male, white, stage:Stage IIIA, dead, 1791 days
1.1
TCGA-DD-A3A6-01A
0 years, female, white, stage:Stage II, dead, 3258 days
1.1
TCGA-CC-A3MA-01A
0 years, male, asian, stage:Stage IIIA, dead, 303 days
1.0
TCGA-DD-A4NV-01A
0 years, male, white, stage:Stage IIIA, alive, 2398 days
0.8
TCGA-NI-A8LF-01A
0 years, male, white, stage:Stage I, alive, 799 days
0.8
TCGA-DD-A4NF-01A
0 years, male, white, stage:Stage I, alive, 942 days
0.8
TCGA-DD-AAEI-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
0.6
TCGA-WX-AA46-01A
0 years, male, white, stage:Stage II, alive, 756 days
0.5
TCGA-ED-A8O5-01A
0 years, female, asian, stage:Stage IIIA, alive, 406 days
0.5
TCGA-G3-AAV2-01A
0 years, male, white, stage:Stage I, alive, 372 days
0.4
TCGA-CC-A7IL-01A
0 years, male, asian, stage:Stage IIIA, dead, 278 days
0.4
TCGA-DD-A1EB-01A
0 years, female, stage:Stage I, alive, 2017 days
0.4
TCGA-CC-A8HU-01A
0 years, female, asian, stage:Stage IIIA, dead, 344 days
0.3
TCGA-DD-AADG-01A
0 years, male, asian, stage:Stage IIIA, alive, 1145 days
0.3
TCGA-DD-AAVY-01A
0 years, male, asian, stage:Stage IIIA, alive, 1970 days
0.2
TCGA-EP-A26S-01A
0 years, male, white, stage:Stage I, alive, 608 days
0.2
TCGA-G3-A25U-01A
0 years, female, asian, stage:Stage I, alive, 1636 days
0.2
TCGA-G3-A3CH-01A
0 years, male, asian, stage:Stage IIIA, alive, 780 days
0.1
TCGA-MI-A75H-01A
0 years, male, white, stage:'--, alive, 747 days
0.1
TCGA-CC-A7IF-01A
0 years, male, asian, stage:Stage IIIA, dead, 649 days
0.1
TCGA-G3-AAV5-01A
0 years, male, white, stage:Stage II, alive, 354 days
0.1
TCGA-G3-AAV4-01A
0 years, female, white, stage:Stage I, dead, 27 days
0.0
TCGA-DD-A3A9-01A
0 years, female, white, stage:Stage IVB, dead, 931 days
0.0
TCGA-CC-A7IK-01A
0 years, male, asian, stage:Stage IIIA, dead, 262 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SPINK1 is not prognostic in Liver Hepatocellular Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
804.1
Number of samples
231
Samples
Sample
Description
TPM
DO50845
0 years, male, NA, stage:3, alive, 210 days
13788.5
DO48717
0 years, male, NA, stage:4, dead, 180 days
12758.1
DO23518
0 years, male, NA, stage:2, alive, 1320 days
5226.2
DO45127
0 years, male, NA, stage:3, dead, 420 days
5038.0
DO48700
0 years, female, NA, stage:2, alive, 810 days
4885.6
DO50857
0 years, male, NA, stage:2, alive, 210 days
4773.7
DO45241
0 years, male, NA, stage:1, alive, 1080 days
4051.0
DO45285
0 years, male, NA, stage:3, alive, 480 days
3793.4
DO45183
0 years, female, NA, stage:2, dead, 570 days
3720.7
DO50844
0 years, male, NA, stage:4, alive, 300 days
3410.2
DO45091
0 years, male, NA, stage:2, dead, 1320 days
3371.2
DO50815
0 years, male, NA, stage:3, alive, 150 days
3366.7
DO23510
0 years, female, NA, stage:2, alive, 870 days
3356.5
DO48720
0 years, female, NA, stage:2, alive, 570 days
3177.9
DO45165
0 years, male, NA, stage:2, alive, 690 days
2973.6
DO45119
0 years, male, NA, stage:3, dead, 510 days
2893.5
DO45297
0 years, female, NA, stage:4, dead, 1260 days
2871.3
DO45257
0 years, male, NA, stage:3, alive, 810 days
2741.1
DO50806
0 years, male, NA, stage:4, alive, 540 days
2719.1
DO45092
0 years, male, NA, stage:4, dead, 1200 days
2711.9
DO50776
0 years, male, NA, stage:1, alive, 690 days
2644.1
DO45161
0 years, male, NA, stage:2, dead, 540 days
2630.6
DO50811
0 years, male, NA, stage:1, alive, 450 days
2576.4
DO45239
0 years, male, NA, stage:2, alive, 870 days
2536.5
DO45125
0 years, male, NA, stage:3, alive, 1680 days
2458.8
DO45265
0 years, male, NA, stage:3, alive, 1020 days
2370.5
DO45099
0 years, male, NA, stage:3, alive, 1590 days
2369.3
DO45287
0 years, male, NA, stage:1, alive, 390 days
2317.7
DO45289
0 years, female, NA, stage:3, alive, 360 days
2258.5
DO48736
0 years, female, NA, stage:1, alive, 600 days
2221.4
DO45263
0 years, male, NA, stage:3, dead, 270 days
2166.5
DO23515
0 years, male, NA, stage:2, alive, 1230 days
1935.8
DO45135
0 years, male, NA, stage:1, alive, 1410 days
1810.8
DO45173
0 years, male, NA, stage:3, alive, 1170 days
1645.3
DO48733
0 years, male, NA, stage:2, alive, 600 days
1590.5
DO45199
0 years, female, NA, stage:2, alive, 1350 days
1587.8
DO48730
0 years, female, NA, stage:2, alive, 630 days
1539.0
DO45153
0 years, female, NA, stage:2, alive, 1380 days
1523.8
DO48728
0 years, female, NA, stage:2, alive, 150 days
1448.6
DO227801
0 years, female, NA, stage:1, alive, 660 days
1410.9
DO23552
0 years, female, NA, stage:1, alive, 810 days
1364.6
DO45157
0 years, male, NA, stage:2, alive, 1980 days
1253.7
DO45217
0 years, female, NA, stage:3, dead, 270 days
1252.9
DO45277
0 years, male, NA, stage:3, alive, 600 days
1247.5
DO45191
0 years, female, NA, stage:2, alive, 1200 days
1222.6
DO45251
0 years, female, NA, stage:2, alive, 900 days
1217.4
DO45143
0 years, male, NA, stage:3, alive, 1290 days
1192.6
DO50850
0 years, male, NA, stage:3, alive, 720 days
1184.6
DO45139
0 years, male, NA, stage:3, alive, 1320 days
1146.4
DO45095
0 years, male, NA, stage:2, alive, 1620 days
1130.5
DO48725
0 years, male, NA, stage:1, alive, 780 days
1122.4
DO45103
0 years, male, NA, stage:3, alive, 450 days
1105.0
DO50803
0 years, female, NA, stage:1, alive, 540 days
1071.4
DO48681
0 years, male, NA, stage:2, alive, 900 days
1044.8
DO23508
0 years, female, NA, stage:2, alive, 390 days
1031.3
DO23524
0 years, female, NA, stage:2, alive, 1050 days
1013.4
DO23519
0 years, male, NA, stage:3, alive, 630 days
969.9
DO45121
0 years, male, NA, stage:3, alive, 1530 days
948.1
DO23527
0 years, male, NA, stage:1, alive, 1050 days
841.9
DO48751
0 years, male, NA, stage:2, dead, 480 days
830.3
DO50793
0 years, male, NA, stage:4, alive, 540 days
825.1
DO50825
0 years, male, NA, stage:2, alive, 390 days
825.0
DO45219
0 years, male, NA, stage:2, alive, 1080 days
819.0
DO50829
0 years, male, NA, stage:3, alive, 570 days
805.4
DO48747
0 years, male, NA, stage:3, alive, 540 days
795.6
DO48697
0 years, female, NA, stage:2, dead, 810 days
778.9
DO45275
0 years, male, NA, stage:3, dead, 10 days
769.7
DO48761
0 years, male, NA, stage:2, alive, 870 days
758.1
DO45231
0 years, male, NA, stage:2, alive, 930 days
754.0
DO45283
0 years, male, NA, stage:3, alive, 510 days
750.5
DO45245
0 years, female, NA, stage:2, dead, 240 days
726.7
DO45221
0 years, female, NA, stage:4, dead, 390 days
721.2
DO23521
0 years, male, NA, stage:3, alive, 1110 days
704.9
DO45273
0 years, male, NA, stage:2, alive, 480 days
662.1
DO23525
0 years, male, NA, stage:4, alive, 1050 days
646.2
DO45094
0 years, male, NA, stage:3, alive, 1650 days
620.6
DO23543
0 years, male, NA, stage:2, alive, 1020 days
612.7
DO45179
0 years, female, NA, stage:2, alive, 600 days
609.8
DO45113
0 years, male, NA, stage:3, alive, 1560 days
601.5
DO23516
0 years, male, NA, stage:3, dead, 20 days
581.4
DO48737
0 years, male, NA, stage:1, alive, 720 days
538.0
DO45243
0 years, female, NA, stage:3, alive, 930 days
537.2
DO48679
0 years, male, NA, stage:2, alive, 1200 days
533.0
DO45301
0 years, male, NA, stage:2, dead, 1440 days
532.3
DO23545
0 years, male, NA, stage:2, dead, 570 days
519.4
DO45223
0 years, male, NA, stage:4, alive, 1020 days
508.5
DO45109
0 years, male, NA, stage:2, alive, 1590 days
472.9
DO50799
0 years, female, NA, stage:2, alive, 540 days
447.7
DO50839
0 years, female, NA, stage:3, alive, 330 days
426.4
DO50809
0 years, male, NA, stage:3, dead, 720 days
398.9
DO48701
0 years, male, NA, stage:2, alive, 780 days
373.2
DO23550
0 years, male, NA, stage:1, alive, 990 days
372.9
DO45213
0 years, male, NA, stage:1, alive, 1200 days
366.9
DO48746
0 years, male, NA, stage:3, alive, 570 days
366.5
DO45131
0 years, male, NA, stage:4, dead, 360 days
354.7
DO45189
0 years, female, NA, stage:2, alive, 1200 days
349.8
DO50789
0 years, female, NA, stage:2, alive, 570 days
337.6
DO45145
0 years, male, NA, stage:3, dead, 60 days
318.3
DO45269
0 years, male, NA, stage:3, alive, 750 days
317.4
DO48704
0 years, female, NA, stage:3, alive, 750 days
304.8
DO50774
0 years, female, NA, stage:2, alive, 720 days
298.7
DO45159
0 years, male, NA, stage:3, alive, 1470 days
297.7
DO23541
0 years, male, NA, stage:2, alive, 930 days
281.3
DO50805
0 years, male, NA, stage:2, alive, 690 days
281.3
DO50820
0 years, female, NA, stage:3, alive, 510 days
280.4
DO23511
0 years, female, NA, stage:3, dead, 180 days
273.4
DO48743
0 years, female, NA, stage:2, alive, 570 days
269.7
DO45279
0 years, male, NA, stage:3, alive, 1290 days
260.0
DO50800
0 years, male, NA, stage:2, alive, 510 days
252.4
DO45307
0 years, female, NA, stage:4, dead, 240 days
249.2
DO23512
0 years, male, NA, stage:1, alive, 1260 days
231.5
DO45237
0 years, male, NA, stage:2, alive, 900 days
220.8
DO48706
0 years, male, NA, stage:2, alive, 870 days
202.8
DO23526
0 years, male, NA, stage:3, alive, 1050 days
200.8
DO23535
0 years, male, NA, stage:1, alive, 960 days
200.7
DO50808
0 years, male, NA, stage:2, alive, 570 days
186.5
DO45299
0 years, female, NA, stage:1, alive, 1440 days
173.1
DO23547
0 years, male, NA, stage:1, alive, 1020 days
168.7
DO48760
0 years, female, NA, stage:2, alive, 690 days
168.2
DO50791
0 years, female, NA, stage:1, dead, 480 days
161.4
DO23546
0 years, male, NA, stage:2, alive, 1050 days
147.8
DO50819
0 years, female, NA, stage:2, alive, 510 days
145.8
DO48732
0 years, male, NA, stage:3, alive, 630 days
141.9
DO23540
0 years, male, NA, stage:1, alive, 750 days
138.6
DO45141
0 years, male, NA, stage:2, alive, 1320 days
138.1
DO45185
0 years, male, NA, stage:2, alive, 600 days
137.2
DO45149
0 years, female, NA, stage:2, alive, 1260 days
132.7
DO45267
0 years, male, NA, stage:3, dead, 570 days
126.8
DO50787
0 years, male, NA, stage:3, alive, 480 days
124.3
DO45255
0 years, male, NA, stage:3, alive, 720 days
123.4
DO23513
0 years, male, NA, stage:3, alive, 1200 days
114.4
DO45096
0 years, male, NA, stage:2, dead, 1290 days
106.3
DO45107
0 years, female, NA, stage:2, alive, 1710 days
106.0
DO227643
0 years, male, NA, stage:2, alive, 1260 days
96.0
DO45193
0 years, female, NA, stage:4, dead, 120 days
94.5
DO48715
0 years, female, NA, stage:2, dead, 690 days
92.4
DO50778
0 years, male, NA, stage:4, alive, 630 days
83.4
DO23539
0 years, male, NA, stage:1, alive, 1110 days
78.1
DO48721
0 years, female, NA, stage:1, alive, 900 days
74.3
DO50783
0 years, male, NA, stage:3, alive, 480 days
73.8
DO23544
0 years, male, NA, stage:2, alive, 960 days
71.6
DO50813
0 years, male, NA, stage:2, alive, 420 days
70.3
DO48723
0 years, male, NA, stage:1, alive, 600 days
67.9
DO45205
0 years, female, NA, stage:2, dead, 90 days
67.0
DO48716
0 years, male, NA, stage:2, alive, 720 days
64.8
DO48741
0 years, male, NA, stage:3, alive, 240 days
53.7
DO50804
0 years, male, NA, stage:2, alive, 720 days
51.9
DO45261
0 years, male, NA, stage:3, alive, 990 days
44.7
DO50822
0 years, male, NA, stage:2, alive, 510 days
42.3
DO45177
0 years, female, NA, stage:3, alive, 1260 days
41.4
DO45117
0 years, female, NA, stage:2, dead, 1110 days
41.4
DO50832
0 years, male, NA, stage:3, alive, 90 days
41.3
DO45215
0 years, male, NA, stage:2, alive, 1170 days
36.5
DO45187
0 years, female, NA, stage:1, alive, 1260 days
34.8
DO23530
0 years, male, NA, stage:4, dead, 180 days
34.5
DO48712
0 years, male, NA, stage:2, alive, 810 days
33.9
DO45305
0 years, male, NA, stage:4, alive, 300 days
31.6
DO50807
0 years, male, NA, stage:1, alive, 540 days
28.9
DO50802
0 years, male, NA, stage:2, alive, 930 days
27.7
DO50840
0 years, male, NA, stage:2, alive, 330 days
25.5
DO45137
0 years, male, NA, stage:1, alive, 1320 days
21.3
DO23517
0 years, male, NA, stage:2, alive, 1200 days
18.2
DO45249
0 years, male, NA, stage:1, alive, 630 days
17.8
DO23548
0 years, female, NA, stage:1, alive, 840 days
17.5
DO50814
0 years, male, NA, stage:3, alive, 420 days
16.3
DO45233
0 years, male, NA, stage:3, alive, 900 days
15.5
DO45227
0 years, female, NA, stage:2, alive, 1020 days
14.1
DO45207
0 years, male, NA, stage:1, alive, 1050 days
13.9
DO45235
0 years, female, NA, stage:1, alive, 900 days
11.4
DO45197
0 years, male, NA, stage:2, alive, 1170 days
9.9
DO48742
0 years, male, NA, stage:2, alive, 600 days
9.0
DO50798
0 years, male, NA, stage:3, dead, 30 days
8.0
DO45093
0 years, male, NA, stage:2, dead, 720 days
7.7
DO45105
0 years, male, NA, stage:1, alive, 1680 days
7.6
DO45123
0 years, female, NA, stage:2, dead, 570 days
7.5
DO50785
0 years, male, NA, stage:4, dead, 90 days
7.3
DO23536
0 years, male, NA, stage:2, alive, 930 days
7.0
DO23549
0 years, male, NA, stage:3, alive, 990 days
6.5
DO23551
0 years, male, NA, stage:3, dead, 150 days
5.9
DO50818
0 years, male, NA, stage:2, alive, 510 days
5.8
DO45129
0 years, male, NA, stage:3, alive, 1470 days
5.6
DO45303
0 years, female, NA, stage:3, alive, 990 days
5.1
DO45229
0 years, male, NA, stage:1, alive, 990 days
4.2
DO23528
0 years, female, NA, stage:2, alive, 1020 days
4.1
DO45259
0 years, male, NA, stage:3, alive, 330 days
3.9
DO45169
0 years, male, NA, stage:3, alive, 1350 days
3.9
DO45247
0 years, female, NA, stage:2, alive, 210 days
3.4
DO45281
0 years, male, NA, stage:4, alive, 750 days
3.1
DO48759
0 years, male, NA, stage:3, alive, 720 days
3.0
DO23529
0 years, male, NA, stage:4, alive, 930 days
2.9
DO23533
0 years, male, NA, stage:2, alive, 900 days
2.7
DO48695
0 years, male, NA, stage:2, alive, 720 days
2.4
DO45115
0 years, male, NA, stage:2, alive, 840 days
2.1
DO45155
0 years, male, NA, stage:2, alive, 2160 days
2.0
DO23532
0 years, female, NA, stage:1, alive, 960 days
1.8
DO48674
0 years, male, NA, stage:2, alive, 1260 days
1.8
DO45111
0 years, male, NA, stage:2, alive, 1590 days
1.8
DO23538
0 years, male, NA, stage:2, alive, 450 days
1.6
DO48682
0 years, female, NA, stage:3, dead, 120 days
1.5
DO45171
0 years, male, NA, stage:3, alive, 600 days
1.4
DO48757
0 years, female, NA, stage:3, alive, 480 days
1.4
DO48693
0 years, male, NA, stage:2, alive, 900 days
1.4
DO23534
0 years, male, NA, stage:2, alive, 840 days
1.4
DO45097
0 years, male, NA, stage:3, alive, 1620 days
1.4
DO45211
0 years, male, NA, stage:3, alive, 240 days
1.4
DO23509
0 years, male, NA, stage:3, dead, 780 days
1.3
DO45195
0 years, male, NA, stage:1, alive, 390 days
1.2
DO45101
0 years, male, NA, stage:2, alive, 1680 days
1.1
DO48719
0 years, male, NA, stage:2, alive, 690 days
1.1
DO45181
0 years, female, NA, stage:2, alive, 1200 days
1.0
DO45225
0 years, male, NA, stage:1, alive, 1050 days
0.7
DO23514
0 years, male, NA, stage:2, alive, 1290 days
0.7
DO45203
0 years, female, NA, stage:2, alive, 1170 days
0.6
DO23542
0 years, male, NA, stage:3, alive, 960 days
0.5
DO48677
0 years, male, NA, stage:3, alive, 1140 days
0.5
DO50859
0 years, male, NA, stage:2, alive, 180 days
0.4
DO45201
0 years, male, NA, stage:1, alive, 900 days
0.4
DO48672
0 years, male, NA, stage:2, alive, 450 days
0.4
DO50817
0 years, male, NA, stage:2, alive, 390 days
0.3
DO45209
0 years, male, NA, stage:4, alive, 1350 days
0.3
DO48727
0 years, female, NA, stage:2, dead, 390 days
0.3
DO45253
0 years, male, NA, stage:2, alive, 870 days
0.2
DO23523
0 years, male, NA, stage:3, alive, 1080 days
0.2
DO45175
0 years, male, NA, stage:2, alive, 1140 days
0.1
DO50855
0 years, male, NA, stage:2, alive, 570 days
0.1
DO23531
0 years, female, NA, stage:3, alive, 900 days
0.1
DO50816
0 years, male, NA, stage:2, alive, 390 days
0.1
DO45133
0 years, male, NA, stage:3, dead, 660 days
0.1
DO23537
0 years, male, NA, stage:2, dead, 900 days
0.1
DO45163
0 years, male, NA, stage:2, alive, 960 days
0.1
DO45167
0 years, male, NA, stage:2, dead, 1440 days
0.0
Show allShow less
LIVER HEPATOCELLULAR CARCINOMA - Protein relative expression (CPTAC)
Number of samples
330
Samples
Sample ID
Sample type
nRPX
697
Tumor
3.4
823
Tumor
3.3
937
Tumor
3.1
865
Tumor
3.1
385
Tumor
3.0
527
Tumor
2.9
223
Tumor
2.6
737
Tumor
2.5
497
Tumor
2.4
473
Tumor
2.1
285
Tumor
2.0
425
Tumor
1.8
745
Tumor
1.8
975
Tumor
1.7
375
Tumor
1.7
617
Tumor
1.6
351
Tumor
1.6
353
Tumor
1.6
1015
Tumor
1.5
191
Tumor
1.5
557
Tumor
1.4
1021
Tumor
1.4
135
Tumor
1.3
363
Tumor
1.2
957
Tumor
1.2
965
Tumor
1.1
467
Tumor
1.1
857
Tumor
1.1
1043
Tumor
1.0
851
Tumor
0.8
545
Tumor
0.8
535
Tumor
0.7
721
Tumor
0.7
221
Tumor
0.7
573
Tumor
0.7
395
Tumor
0.7
727
Tumor
0.6
661
Tumor
0.6
523
Tumor
0.6
443
Tumor
0.5
383
Tumor
0.5
1025
Tumor
0.4
983
Tumor
0.4
224
Normal
0.4
663
Tumor
0.3
863
Tumor
0.3
867
Tumor
0.3
755
Tumor
0.2
195
Tumor
0.2
671
Tumor
0.2
1016
Normal
0.2
493
Tumor
0.1
1013
Tumor
0.1
217
Tumor
0.1
963
Tumor
0.1
873
Tumor
0.1
283
Tumor
0.1
123
Tumor
0.1
738
Normal
0.1
286
Normal
0.1
455
Tumor
0.0
517
Tumor
0.0
331
Tumor
0.0
647
Tumor
0.0
563
Tumor
0.0
147
Tumor
0.0
332
Normal
-0.1
664
Normal
-0.1
463
Tumor
-0.1
361
Tumor
-0.1
413
Tumor
-0.1
938
Normal
-0.2
777
Tumor
-0.2
145
Tumor
-0.2
951
Tumor
-0.2
528
Normal
-0.2
665
Tumor
-0.2
341
Tumor
-0.3
228
Normal
-0.3
387
Tumor
-0.3
343
Tumor
-0.3
494
Normal
-0.3
491
Tumor
-0.3
982
Normal
-0.4
415
Tumor
-0.4
943
Tumor
-0.4
391
Tumor
-0.4
866
Normal
-0.4
427
Tumor
-0.4
877
Tumor
-0.4
977
Tumor
-0.4
864
Normal
-0.4
277
Tumor
-0.5
868
Normal
-0.5
554
Normal
-0.5
862
Normal
-0.5
447
Tumor
-0.5
386
Normal
-0.5
213
Tumor
-0.6
746
Normal
-0.6
352
Normal
-0.6
482
Normal
-0.6
284
Normal
-0.6
171
Tumor
-0.6
297
Tumor
-0.6
976
Normal
-0.7
488
Normal
-0.7
861
Tumor
-0.7
1027
Tumor
-0.7
212
Normal
-0.7
468
Normal
-0.7
218
Normal
-0.7
1014
Normal
-0.7
923
Tumor
-0.7
874
Normal
-0.7
342
Normal
-0.7
421
Tumor
-0.7
472
Normal
-0.7
141
Tumor
-0.7
534
Normal
-0.8
955
Tumor
-0.8
483
Tumor
-0.8
161
Tumor
-0.8
978
Normal
-0.8
484
Normal
-0.9
513
Tumor
-0.9
817
Tumor
-0.9
487
Tumor
-0.9
354
Normal
-0.9
227
Tumor
-0.9
492
Normal
-0.9
433
Tumor
-0.9
471
Tumor
-0.9
984
Normal
-0.9
358
Normal
-0.9
824
Normal
-0.9
546
Normal
-0.9
958
Normal
-0.9
533
Tumor
-0.9
257
Tumor
-1.0
313
Tumor
-1.0
465
Tumor
-1.0
813
Tumor
-1.0
858
Normal
-1.0
474
Normal
-1.0
518
Normal
-1.1
964
Normal
-1.1
344
Normal
-1.1
526
Normal
-1.1
786
Normal
-1.1
756
Normal
-1.2
524
Normal
-1.2
516
Normal
-1.2
376
Normal
-1.2
364
Normal
-1.2
968
Normal
-1.2
187
Tumor
-1.2
146
Normal
-1.2
514
Normal
-1.3
981
Tumor
-1.3
367
Tumor
-1.3
192
Normal
-1.3
456
Normal
-1.3
384
Normal
-1.3
537
Tumor
-1.3
368
Normal
-1.3
953
Tumor
-1.3
356
Normal
-1.3
666
Normal
-1.3
366
Normal
-1.4
944
Normal
-1.4
538
Normal
-1.4
741
Tumor
-1.4
431
Tumor
-1.4
365
Tumor
-1.4
724
Normal
-1.4
525
Tumor
-1.4
357
Tumor
-1.4
778
Normal
-1.4
662
Normal
-1.4
466
Normal
-1.4
814
Normal
-1.5
188
Normal
-1.5
1032
Normal
-1.5
211
Tumor
-1.5
816
Normal
-1.5
393
Tumor
-1.5
477
Tumor
-1.5
444
Normal
-1.5
952
Normal
-1.5
137
Tumor
-1.5
481
Tumor
-1.5
355
Tumor
-1.5
396
Normal
-1.5
464
Normal
-1.5
136
Normal
-1.5
362
Normal
-1.5
966
Normal
-1.6
515
Tumor
-1.6
954
Normal
-1.6
818
Normal
-1.6
1045
Tumor
-1.6
571
Tumor
-1.6
478
Normal
-1.6
553
Tumor
-1.7
392
Normal
-1.7
452
Normal
-1.7
451
Tumor
-1.7
728
Normal
-1.7
394
Normal
-1.8
558
Normal
-1.8
785
Tumor
-1.8
416
Normal
-1.8
461
Tumor
-1.8
967
Tumor
-1.8
742
Normal
-1.8
648
Normal
-1.8
1041
Tumor
-1.8
917
Tumor
-1.9
743
Tumor
-1.9
298
Normal
-2.0
723
Tumor
-2.0
852
Normal
-2.0
132
Normal
-2.0
138
Normal
-2.0
536
Normal
-2.0
278
Normal
-2.1
328
Normal
-2.1
956
Normal
-2.1
314
Normal
-2.1
172
Normal
-2.1
1026
Normal
-2.1
412
Normal
-2.1
448
Normal
-2.1
1046
Normal
-2.2
744
Normal
-2.2
567
Tumor
-2.2
113
Tumor
-2.2
311
Tumor
-2.2
196
Normal
-2.2
434
Normal
-2.3
312
Normal
-2.3
162
Normal
-2.3
214
Normal
-2.3
436
Normal
-2.3
722
Normal
-2.3
881
Tumor
-2.3
232
Normal
-2.4
636
Normal
-2.4
446
Normal
-2.4
112
Tumor
-2.4
327
Tumor
-2.4
267
Tumor
-2.4
1042
Normal
-2.4
635
Tumor
-2.4
125
Tumor
-2.4
918
Normal
-2.5
715
Tumor
-2.5
131
Tumor
-2.5
627
Tumor
-2.5
574
Normal
-2.5
231
Tumor
-2.6
435
Tumor
-2.6
883
Tumor
-2.6
148
Normal
-2.7
1022
Normal
-2.7
462
Normal
-2.7
1028
Normal
-2.7
498
Normal
-2.8
127
Tumor
-2.8
696
Normal
-2.8
913
Tumor
-2.8
128
Normal
-2.8
432
Normal
-2.8
1031
Tumor
-2.9
185
Tumor
-2.9
272
Normal
-2.9
564
Normal
-3.0
445
Tumor
-3.0
114
Normal
-3.0
388
Normal
-3.0
815
Tumor
-3.0
1044
Normal
-3.0
258
Normal
-3.1
262
Normal
-3.1
916
Normal
-3.1
414
Normal
-3.1
261
Tumor
-3.1
111
Normal
-3.2
925
Tumor
-3.2
422
Normal
-3.3
615
Tumor
-3.3
186
Normal
-3.3
126
Normal
-3.3
268
Normal
-3.3
713
Tumor
-3.3
922
Normal
-3.4
424
Normal
-3.5
572
Normal
-3.5
915
Tumor
-3.5
716
Normal
-3.6
926
Normal
-3.6
882
Normal
-3.8
921
Tumor
-3.8
884
Normal
-3.8
911
Tumor
-3.9
924
Normal
-3.9
568
Normal
-4.0
642
Normal
-4.0
912
Normal
-4.0
672
Normal
-4.1
641
Tumor
-4.1
271
Tumor
-4.2
714
Normal
-4.2
628
Normal
-4.2
914
Normal
-4.2
695
Tumor
-4.5
685
Tumor
-4.5
423
Tumor
-4.7
616
Normal
-4.8
686
Normal
-4.9
142
Normal
-5.2
411
Tumor
-5.3
222
Normal
-7.5
878
Normal
-10.5
698
Normal
-12.8
428
Normal
-12.9
124
Normal
N/A
618
Normal
N/A
426
Normal
N/A
Show allShow less
LIVER CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.