HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni
Consensus:13.2 nTPM
HPA Brain:33.8 nTPM
GTEx:13.2 nTPM
FANTOM5:36.4 Scaled Tags Per Million
Pig:22.2 nTPM
Mouse:21.9 nTPM
Allen mouse:0.0 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA043124
Glial cells Not detected
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 33.8
Sample id Sample description nTPM
Hippocampus
nTPM: 29.9
1898 Male, age 80, left hemisphere 32.7
1855 Male, age 76, left hemisphere 31.9
2148 Female, age 91, left hemisphere 31.3
1911 Female, age 85, right hemisphere 30.9
2529 Female, age 94, left hemisphere 26.5
2621 Female, age 67, right hemisphere 26.1
Dentate gyrus
nTPM: 32.2
2531 Female, age 67, both hemispheres 36.2
2528 Male, age 74, both hemispheres 34.4
2010 Male, age 76, both hemispheres 33.2
2246 Female, age 85, both hemispheres 33.2
1927 Female, age 91, both hemispheres 33.1
2530 Female, age 94, left hemisphere 23.3
Entorhinal gyrus
nTPM: 30.3
1938 Female, age 85, left hemisphere 36.1
1787 Male, age 76, left hemisphere 30.0
2117 Female, age 91, right hemisphere 29.9
2613 Female, age 94, left hemisphere 29.7
2764 Male, age 80, right hemisphere 28.2
2686 Male, age 75, right hemisphere 28.0
Hippocampus, CA1
nTPM: 33.8
2749 Male, age 80, left hemisphere 39.5
1873 Female, age 85, both hemispheres 35.4
2527 Male, age 74, both hemispheres 33.1
2045 Male, age 76, both hemispheres 31.1
2082 Female, age 91, right hemisphere 29.7
Hippocampus, CA2
nTPM: 30.4
1963 Male, age 80, left hemisphere 36.1
1892 Male, age 76, both hemispheres 36.0
1940 Female, age 85, left hemisphere 29.4
2249 Male, age 74, both hemispheres 28.4
2113 Female, age 91, right hemisphere 28.3
2437 Female, age 94, left hemisphere 24.0
Hippocampus, CA3
nTPM: 33.6
2620 Female, age 94, left hemisphere 38.8
1891 Female, age 85, both hemispheres 35.4
2137 Male, age 80, left hemisphere 35.3
1867 Male, age 76, both hemispheres 33.5
2436 Male, age 74, both hemispheres 29.7
2861 Female, age 67, both hemispheres 28.8
Parahippocampal cortex
nTPM: 31.2
2693 Female, age 94, both hemispheres 36.6
1933 Female, age 85, both hemispheres 35.7
1850 Male, age 80, both hemispheres 33.9
1990 Female, age 91, right hemisphere 31.9
2692 Male, age 74, both hemispheres 31.7
2532 Female, age 72, left hemisphere 31.0
2250 Female, age 67, right hemisphere 29.9
2245 Female, age 91, both hemispheres 27.8
2018 Male, age 76, both hemispheres 26.9
2622 Female, age 67, right hemisphere 26.7
Perirhinal gyrus
nTPM: 32.2
1847 Female, age 91, left hemisphere 35.4
1794 Male, age 80, right hemisphere 33.5
2521 Female, age 94, right hemisphere 32.9
1841 Female, age 85, right hemisphere 31.7
2848 Male, age 76, right hemisphere 27.8
Subiculum
nTPM: 31.6
2729 Female, age 91, right hemisphere 37.2
1977 Female, age 85, both hemispheres 35.5
1901 Male, age 80, both hemispheres 31.6
2619 Male, age 74, both hemispheres 29.8
2042 Male, age 76, both hemispheres 28.1
2438 Female, age 94, left hemisphere 27.4

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 13.2
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 13.2
Samples: 197

Max nTPM: 25.9
Min nTPM: 5.8
Std nTPM: 3.1
Median nTPM: 12.5
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 25.9
GTEX-T6MN-0011-R1A-SM-32QOY 50-59 years, male 24.7
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 22.3
GTEX-16YQH-0011-R1a-SM-7LT8R 30-39 years, male 22.2
GTEX-QMR6-0011-R1A-SM-32PKW 50-59 years, male 21.0
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 20.4
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 20.3
GTEX-14ABY-0011-R1a-SM-6EU2W 50-59 years, male 19.9
GTEX-PVOW-0011-R1A-SM-32PL6 40-49 years, male 19.8
GTEX-11ZTS-0011-R1a-SM-5BC71 60-69 years, female 19.0
GTEX-Q2AG-0011-R1A-SM-2HMJI 40-49 years, female 18.4
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 36.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 36.4
FF:10169-103B7 60 years, female 43.6
FF:10153-102I9 76 years, female 29.2

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 22.2
Pig sample Sample description nTPM
Subiculum
nTPM: 16.7
Samples: 4

Max nTPM: 21.0
Min nTPM: 14.3
Sample A Female 21.0
Sample B Female 16.8
Sample C Male 14.7
Sample D Male 14.3
Dorsal hippocampus
nTPM: 22.2
Samples: 4

Max nTPM: 25.7
Min nTPM: 19.5
Sample A Female 25.7
Sample B Female 21.6
Sample C Male 22.1
Sample D Male 19.5
Entorhinal cortex
nTPM: 17.8
Samples: 4

Max nTPM: 21.6
Min nTPM: 14.5
Sample A Female 16.2
Sample B Female 21.6
Sample C Male 18.7
Sample D Male 14.5
Ventral hippocampus
nTPM: 17.3
Samples: 4

Max nTPM: 19.0
Min nTPM: 15.2
Sample A Female 17.4
Sample B Female 17.6
Sample C Male 15.2
Sample D Male 19.0

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 21.9
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 20.4
Samples: 4

Max nTPM: 21.3
Min nTPM: 19.0
Sample A Male 19.0
Sample B Male 20.8
Sample C Female 21.3
Sample D Female 20.6
Hippocampal formation
nTPM: 21.9
Samples: 4

Max nTPM: 22.8
Min nTPM: 20.0
Sample A Male 22.5
Sample B Male 22.1
Sample C Female 22.8
Sample D Female 20.0

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 0.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.0
70195012 Antisense, RP_050517_02_B11, Mouse strain C57BL/6J (56 days, male) 0.0

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