HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Low
RNA expressioni
Consensus:10.2 nTPM
HPA Brain:23.6 nTPM
GTEx:10.2 nTPM
FANTOM5:35.6 Scaled Tags Per Million
Pig:13.1 nTPM
Mouse:16.6 nTPM
Allen mouse:4.7 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA046177Antibody HPA048081
Glial cells Not detectedMedium
Neuronal cells LowMedium





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 23.6
Sample id Sample description nTPM
Hippocampus
nTPM: 17.3
1898 Male, age 80, left hemisphere 20.8
1911 Female, age 85, right hemisphere 20.7
2621 Female, age 67, right hemisphere 17.3
2529 Female, age 94, left hemisphere 15.3
1855 Male, age 76, left hemisphere 14.9
2148 Female, age 91, left hemisphere 14.8
Dentate gyrus
nTPM: 20.8
2010 Male, age 76, both hemispheres 30.8
2530 Female, age 94, left hemisphere 25.1
1927 Female, age 91, both hemispheres 24.5
2246 Female, age 85, both hemispheres 17.3
2528 Male, age 74, both hemispheres 15.9
2531 Female, age 67, both hemispheres 11.1
Entorhinal gyrus
nTPM: 12.7
1938 Female, age 85, left hemisphere 15.6
2686 Male, age 75, right hemisphere 13.7
2613 Female, age 94, left hemisphere 12.8
1787 Male, age 76, left hemisphere 12.7
2764 Male, age 80, right hemisphere 11.7
2117 Female, age 91, right hemisphere 9.8
Hippocampus, CA1
nTPM: 23.6
2749 Male, age 80, left hemisphere 44.5
1873 Female, age 85, both hemispheres 25.3
2045 Male, age 76, both hemispheres 22.4
2527 Male, age 74, both hemispheres 15.9
2082 Female, age 91, right hemisphere 9.8
Hippocampus, CA2
nTPM: 19.6
1892 Male, age 76, both hemispheres 27.0
1963 Male, age 80, left hemisphere 26.3
2249 Male, age 74, both hemispheres 18.7
1940 Female, age 85, left hemisphere 17.5
2437 Female, age 94, left hemisphere 16.0
2113 Female, age 91, right hemisphere 12.1
Hippocampus, CA3
nTPM: 21.6
2137 Male, age 80, left hemisphere 39.4
1867 Male, age 76, both hemispheres 27.6
2436 Male, age 74, both hemispheres 17.2
1891 Female, age 85, both hemispheres 16.1
2861 Female, age 67, both hemispheres 15.3
2620 Female, age 94, left hemisphere 13.9
Parahippocampal cortex
nTPM: 16.5
1933 Female, age 85, both hemispheres 23.2
2693 Female, age 94, both hemispheres 19.2
1850 Male, age 80, both hemispheres 17.6
2250 Female, age 67, right hemisphere 17.3
2245 Female, age 91, both hemispheres 16.2
2532 Female, age 72, left hemisphere 16.1
2622 Female, age 67, right hemisphere 16.1
2018 Male, age 76, both hemispheres 14.2
1990 Female, age 91, right hemisphere 13.3
2692 Male, age 74, both hemispheres 12.3
Perirhinal gyrus
nTPM: 16.6
1841 Female, age 85, right hemisphere 20.8
2521 Female, age 94, right hemisphere 17.2
1794 Male, age 80, right hemisphere 15.7
1847 Female, age 91, left hemisphere 15.3
2848 Male, age 76, right hemisphere 13.9
Subiculum
nTPM: 15.8
2042 Male, age 76, both hemispheres 22.2
1901 Male, age 80, both hemispheres 20.6
1977 Female, age 85, both hemispheres 15.7
2438 Female, age 94, left hemisphere 14.4
2729 Female, age 91, right hemisphere 12.0
2619 Male, age 74, both hemispheres 9.9

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 10.2
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 10.2
Samples: 197

Max nTPM: 26.3
Min nTPM: 3.3
Std nTPM: 3.4
Median nTPM: 9.9
GTEX-UTHO-0011-R1A-SM-3GIJO 60-69 years, male 26.3
GTEX-14LZ3-0011-R1a-SM-69LP5 60-69 years, female 23.8
GTEX-13NZA-0011-R1b-SM-5LUAF 60-69 years, male 18.7
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 18.4
GTEX-1CAV2-0011-R1a-SM-ARZML 40-49 years, female 18.0
GTEX-1IDJH-0011-R1b-SM-ARU6U 70-79 years, male 17.9
GTEX-16XZZ-0011-R1a-SM-7LTAH 60-69 years, male 17.5
GTEX-13JVG-0011-R1a-SM-5KM32 60-69 years, male 16.7
GTEX-1F6I4-0011-R1a-SM-9OSWU 60-69 years, male 16.4
GTEX-12WSE-0011-R1b-SM-5GU4V 20-29 years, male 16.1
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 16.1
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 35.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 35.6
FF:10169-103B7 60 years, female 49.8
FF:10153-102I9 76 years, female 21.3

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 13.1
Pig sample Sample description nTPM
Subiculum
nTPM: 8.1
Samples: 4

Max nTPM: 9.9
Min nTPM: 7.4
Sample A Female 7.4
Sample B Female 7.6
Sample C Male 7.4
Sample D Male 9.9
Dorsal hippocampus
nTPM: 5.2
Samples: 4

Max nTPM: 5.7
Min nTPM: 4.2
Sample A Female 5.7
Sample B Female 5.5
Sample C Male 5.4
Sample D Male 4.2
Entorhinal cortex
nTPM: 13.1
Samples: 4

Max nTPM: 13.8
Min nTPM: 12.0
Sample A Female 13.4
Sample B Female 13.8
Sample C Male 13.3
Sample D Male 12.0
Ventral hippocampus
nTPM: 6.0
Samples: 4

Max nTPM: 6.2
Min nTPM: 5.9
Sample A Female 6.2
Sample B Female 5.9
Sample C Male 6.0
Sample D Male 5.9

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 16.6
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 16.6
Samples: 4

Max nTPM: 17.7
Min nTPM: 14.2
Sample A Male 17.7
Sample B Male 17.4
Sample C Female 14.2
Sample D Female 17.0
Hippocampal formation
nTPM: 10.9
Samples: 4

Max nTPM: 13.3
Min nTPM: 10.0
Sample A Male 13.3
Sample B Male 10.1
Sample C Female 10.1
Sample D Female 10.0

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 4.7
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 4.7
69059820 Antisense, RP_050317_04_B04, Mouse strain C57BL/6J (56 days, male) 4.7

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