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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
TMEM41A is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
11.4
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
20.4
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
20.3
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
20.3
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
19.4
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
18.8
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
18.6
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
18.4
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
18.1
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
18.1
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
17.8
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
16.6
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
15.7
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
15.0
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
14.8
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
14.8
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
14.7
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
14.7
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
14.7
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
14.6
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
14.1
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
14.0
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
13.1
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
12.5
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
12.5
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
12.2
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
12.0
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
11.9
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
11.7
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
11.4
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
11.3
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
11.2
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
11.0
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
10.6
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
10.3
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
10.3
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
10.1
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
10.0
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
9.9
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
9.9
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
9.6
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
9.5
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
9.0
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
8.9
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
8.7
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
8.7
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
8.6
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
8.2
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
7.9
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
7.6
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
7.6
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
7.3
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
7.3
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
7.1
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
6.8
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
6.7
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
6.5
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
6.4
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
6.3
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
6.3
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
5.5
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
5.1
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
4.8
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
4.7
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
TMEM41A is not prognostic in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
12.3
Number of samples
521
Samples
Sample
Description
TPM
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
39.6
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
34.3
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
33.6
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
28.8
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
28.7
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
27.7
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
27.0
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
26.1
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
26.1
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
25.5
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
24.7
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
24.3
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
24.0
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
24.0
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
24.0
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
23.7
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
23.4
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
23.2
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
23.1
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
23.0
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
23.0
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
22.7
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
22.6
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
22.3
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
21.9
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
21.4
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
21.4
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
20.9
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
20.8
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
20.8
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
20.3
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
20.2
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
20.2
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
19.9
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
19.3
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
18.8
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
18.7
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
18.5
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
18.4
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
18.4
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
18.3
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
18.3
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
18.2
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
17.9
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
17.9
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
17.8
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
17.7
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
17.7
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
17.5
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
17.5
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
17.5
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
17.3
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
17.3
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
17.2
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
17.2
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
17.2
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
17.1
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
17.1
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
17.1
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
17.1
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
17.0
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
17.0
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
16.8
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
16.7
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
16.6
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
16.6
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
16.5
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
16.5
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
16.4
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
16.4
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
16.3
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
16.3
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
16.3
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
16.2
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
16.1
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
16.1
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
16.1
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
16.1
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
16.0
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
16.0
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
16.0
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
15.9
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
15.9
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
15.9
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
15.8
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
15.8
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
15.7
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
15.7
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
15.7
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
15.6
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
15.6
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
15.5
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
15.5
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
15.4
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
15.3
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
15.3
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
15.3
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
15.3
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
15.3
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
15.3
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
15.3
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
15.2
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
15.2
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
15.2
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
15.2
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
15.2
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
15.2
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
15.1
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
15.0
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
15.0
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
15.0
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
14.9
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
14.9
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
14.9
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
14.9
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
14.8
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
14.8
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
14.8
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
14.7
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
14.7
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
14.7
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
14.7
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
14.5
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
14.4
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
14.4
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
14.3
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
14.3
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
14.3
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
14.3
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
14.2
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
14.2
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
14.2
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
14.1
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
14.1
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
14.1
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
14.1
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
14.1
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
14.0
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
14.0
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
14.0
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
14.0
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
13.9
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
13.9
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
13.9
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
13.8
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
13.8
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
13.8
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
13.8
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
13.7
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
13.7
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
13.7
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
13.6
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
13.6
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
13.6
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
13.6
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
13.6
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
13.6
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
13.5
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
13.5
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
13.5
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
13.5
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
13.5
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
13.5
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
13.5
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
13.5
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
13.4
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
13.4
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
13.4
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
13.4
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
13.3
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
13.3
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
13.3
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
13.3
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
13.2
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
13.2
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
13.2
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
13.2
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
13.2
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
13.2
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
13.2
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
13.2
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
13.2
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
13.1
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
13.1
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
13.1
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
13.1
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
13.1
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
13.1
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
13.1
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
13.0
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
13.0
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
13.0
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
13.0
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
12.9
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
12.9
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
12.9
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
12.9
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
12.9
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
12.9
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
12.9
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
12.9
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
12.8
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
12.8
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
12.7
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
12.7
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
12.7
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
12.7
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
12.6
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
12.6
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
12.6
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
12.6
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
12.6
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
12.5
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
12.5
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
12.5
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
12.5
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
12.5
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
12.5
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
12.5
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
12.5
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
12.5
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
12.4
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
12.4
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
12.4
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
12.4
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
12.4
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
12.4
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
12.4
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
12.4
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
12.4
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
12.4
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
12.4
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
12.3
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
12.3
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
12.3
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
12.3
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
12.3
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
12.2
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
12.2
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
12.2
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
12.2
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
12.1
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
12.1
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
12.1
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
12.1
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
12.1
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
12.1
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
12.0
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
12.0
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
12.0
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
12.0
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
11.9
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
11.9
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
11.9
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
11.9
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
11.9
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
11.9
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
11.9
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
11.9
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
11.8
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
11.8
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
11.8
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
11.8
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
11.8
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
11.8
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
11.8
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
11.8
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
11.7
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
11.7
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
11.7
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
11.7
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
11.7
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
11.7
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
11.7
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
11.7
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
11.7
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
11.6
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
11.6
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
11.6
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
11.6
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
11.5
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
11.5
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
11.5
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
11.5
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
11.5
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
11.5
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
11.5
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
11.5
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
11.5
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
11.4
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
11.4
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
11.4
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
11.4
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
11.4
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
11.3
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
11.3
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
11.3
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
11.3
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
11.3
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
11.3
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
11.2
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
11.2
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
11.2
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
11.2
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
11.1
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
11.1
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
11.1
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
11.1
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
11.1
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
11.1
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
11.0
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
11.0
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
11.0
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
11.0
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
11.0
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
11.0
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
11.0
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
10.9
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
10.9
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
10.9
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
10.9
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
10.8
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
10.8
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
10.8
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
10.8
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
10.8
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
10.8
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
10.8
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
10.8
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
10.8
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
10.7
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
10.7
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
10.7
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
10.7
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
10.7
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
10.6
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
10.6
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
10.6
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
10.5
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
10.5
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
10.5
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
10.5
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
10.5
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
10.4
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
10.4
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
10.4
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
10.4
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
10.4
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
10.4
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
10.4
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
10.4
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
10.4
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
10.4
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
10.3
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
10.3
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
10.3
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
10.3
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
10.3
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
10.2
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
10.2
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
10.2
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
10.2
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
10.2
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
10.1
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
10.1
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
10.1
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
10.1
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
10.0
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
10.0
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
10.0
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
10.0
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
10.0
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
9.9
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
9.9
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
9.9
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
9.9
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
9.9
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
9.8
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
9.7
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
9.7
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
9.7
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
9.7
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
9.7
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
9.7
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
9.6
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
9.6
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
9.6
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
9.6
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
9.5
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
9.5
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
9.5
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
9.5
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
9.5
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
9.5
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
9.4
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
9.4
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
9.3
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
9.3
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
9.3
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
9.3
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
9.3
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
9.3
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
9.3
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
9.2
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
9.2
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
9.2
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
9.2
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
9.2
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
9.2
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
9.1
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
9.0
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
9.0
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
9.0
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
8.9
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
8.9
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
8.9
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
8.9
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
8.8
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
8.8
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
8.7
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
8.7
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
8.6
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
8.6
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
8.6
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
8.5
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
8.5
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
8.4
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
8.4
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
8.3
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
8.3
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
8.3
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
8.3
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
8.2
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
8.1
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
8.0
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
8.0
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
8.0
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
7.9
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
7.9
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
7.9
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
7.9
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
7.9
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
7.9
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
7.8
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
7.8
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
7.8
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
7.8
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
7.8
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
7.7
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
7.7
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
7.7
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
7.6
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
7.6
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
7.6
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
7.6
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
7.5
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
7.4
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
7.4
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
7.4
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
7.4
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
7.4
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
7.4
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
7.3
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
7.3
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
7.3
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
7.3
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
7.3
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
7.2
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
7.2
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
7.1
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
7.1
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
7.1
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
7.1
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
7.0
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
7.0
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
7.0
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
6.9
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
6.9
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
6.8
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
6.8
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
6.8
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
6.8
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
6.8
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
6.8
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
6.7
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
6.7
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
6.6
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
6.6
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
6.6
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
6.6
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
6.6
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
6.5
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
6.5
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
6.5
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
6.4
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
6.4
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
6.4
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
6.3
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
6.2
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
6.2
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
6.2
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
6.1
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
6.1
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
6.1
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
6.0
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
6.0
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
6.0
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
5.8
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
5.8
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
5.8
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
5.7
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
5.7
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
5.6
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
5.6
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
5.4
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
5.3
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
4.8
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
4.1
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
3.6
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
3.5
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
TMEM41A is not prognostic in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
15.7
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
58.2
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
41.5
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
32.7
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
32.3
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
28.1
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
27.4
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
27.3
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
26.4
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
24.8
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
24.6
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
24.2
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
24.2
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
22.8
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
20.9
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
20.6
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
20.5
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
20.4
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
20.3
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
19.6
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
19.6
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
18.7
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
18.6
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
17.7
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
17.5
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
17.3
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
16.9
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
16.9
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
16.8
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
16.2
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
16.1
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
16.0
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
15.8
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
15.5
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
15.5
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
15.5
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
15.3
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
15.2
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
15.2
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
15.1
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
15.0
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
14.9
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
14.6
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
14.4
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
14.3
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
14.3
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
14.0
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
13.9
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
13.9
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
13.8
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
13.7
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
13.6
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
13.6
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
13.6
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
13.5
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
13.5
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
13.4
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
13.4
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
13.3
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
13.2
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
13.2
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
13.2
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
13.2
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
13.1
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
12.9
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
12.9
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
12.8
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
12.8
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
12.8
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
12.4
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
12.3
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
12.1
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
12.1
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
12.0
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
11.9
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
11.9
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
11.9
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
11.9
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
11.8
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
11.4
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
11.4
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
11.3
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
11.2
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
11.0
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
10.8
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
10.6
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
10.5
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
10.4
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
10.1
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
9.9
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
9.9
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
9.7
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
9.6
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
9.3
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
8.8
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
8.7
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
8.5
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
7.9
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
7.7
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
7.0
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
TMEM41A is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
19.9
Number of samples
282
Samples
Sample
Description
TPM
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
159.4
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
71.7
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
67.6
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
49.0
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
48.9
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
47.0
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
42.3
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
42.1
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
41.6
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
41.4
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
41.2
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
40.9
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
37.9
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
37.1
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
35.9
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
35.5
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
34.4
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
34.4
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
33.8
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
33.7
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
33.6
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
33.1
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
32.8
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
32.6
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
32.4
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
32.1
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
31.6
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
31.6
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
31.5
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
31.5
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
30.0
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
30.0
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
29.9
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
29.8
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
29.5
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
28.4
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
28.0
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
27.7
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
27.6
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
27.4
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
26.6
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
26.5
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
26.5
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
26.4
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
26.3
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
26.3
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
26.0
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
25.6
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
25.5
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
25.4
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
25.4
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
25.3
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
25.2
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
25.2
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
25.2
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
25.2
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
24.9
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
24.9
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
24.8
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
24.7
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
24.7
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
24.6
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
24.6
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
24.5
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
24.4
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
24.3
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
24.0
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
23.8
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
23.8
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
23.6
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
23.6
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
23.4
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
23.4
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
23.3
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
23.3
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
23.2
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
23.0
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
23.0
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
23.0
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
22.9
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
22.9
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
22.7
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
22.7
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
22.7
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
22.6
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
22.4
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
22.3
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
22.1
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
22.1
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
22.0
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
22.0
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
21.9
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
21.8
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
21.8
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
21.8
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
21.8
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
21.6
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
21.4
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
21.4
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
21.4
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
21.3
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
21.1
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
21.1
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
21.1
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
20.9
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
20.9
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
20.8
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
20.7
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
20.7
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
20.7
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
20.6
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
20.3
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
20.1
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
20.1
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
20.0
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
20.0
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
19.8
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
19.7
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
19.6
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
19.4
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
19.4
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
19.3
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
19.2
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
19.1
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
19.1
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
19.0
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
19.0
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
18.9
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
18.8
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
18.8
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
18.7
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
18.6
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
18.6
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
18.5
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
18.4
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
18.3
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
18.1
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
18.1
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
18.1
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
18.0
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
17.9
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
17.7
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
17.7
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
17.7
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
17.4
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
17.4
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
17.3
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
17.2
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
17.2
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
17.1
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
17.0
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
17.0
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
17.0
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
16.8
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
16.8
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
16.8
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
16.7
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
16.7
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
16.7
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
16.6
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
16.5
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
16.5
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
16.4
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
16.3
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
16.3
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
16.2
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
16.2
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
16.1
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
16.0
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
16.0
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
15.8
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
15.7
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
15.7
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
15.7
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
15.7
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
15.5
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
15.4
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
15.4
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
15.2
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
15.2
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
15.0
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
14.7
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
14.7
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
14.7
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
14.6
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
14.6
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
14.5
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
14.5
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
14.4
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
14.3
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
14.2
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
14.2
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
14.1
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
14.1
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
14.1
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
13.8
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
13.8
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
13.7
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
13.7
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
13.6
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
13.6
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
13.6
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
13.6
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
13.5
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
13.4
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
13.3
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
13.3
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
13.2
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
13.1
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
13.1
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
13.0
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
13.0
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
13.0
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
13.0
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
12.9
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
12.8
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
12.7
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
12.7
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
12.6
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
12.6
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
12.5
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
12.5
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
12.5
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
12.2
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
12.0
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
12.0
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
11.9
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
11.9
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
11.9
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
11.9
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
11.9
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
11.8
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
11.8
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
11.8
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
11.6
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
11.6
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
11.6
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
11.6
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
11.5
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
11.4
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
11.3
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
11.2
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
11.1
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
11.0
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
10.8
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
10.8
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
10.8
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
10.7
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
10.5
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
10.5
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
10.5
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
10.4
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
10.4
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
10.4
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
10.2
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
10.1
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
10.1
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
10.0
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
10.0
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
9.9
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
9.9
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
9.9
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
9.8
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
9.6
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
9.6
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
9.6
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
9.5
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
9.1
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
9.1
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
9.1
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
8.8
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
8.8
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
8.7
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
8.5
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
8.5
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
8.5
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
8.4
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
7.1
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
6.7
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
6.6
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
5.9
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
4.2
Show allShow less
RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0002350011
Tumor
1.6
CPT0012280003
Tumor
1.3
CPT0025110003
Tumor
1.2
CPT0088480003
Tumor
1.0
CPT0020120003
Tumor
0.9
CPT0011410003
Tumor
0.8
CPT0001180009
Tumor
0.8
CPT0079270003
Tumor
0.8
CPT0078800003
Tumor
0.8
CPT0012180003
Tumor
0.7
CPT0086950003
Tumor
0.7
CPT0078830003
Tumor
0.7
CPT0023350003
Tumor
0.7
CPT0092800003
Normal
0.6
CPT0086820003
Tumor
0.6
CPT0077310003
Tumor
0.6
CPT0012550003
Tumor
0.6
CPT0081880003
Tumor
0.5
CPT0010170001
Normal
0.5
CPT0076330003
Tumor
0.5
CPT0015730003
Tumor
0.5
CPT0023360001
Normal
0.5
CPT0075130003
Tumor
0.4
CPT0065430003
Tumor
0.4
CPT0006950001
Normal
0.4
CPT0025580004
Tumor
0.4
CPT0063630003
Tumor
0.4
CPT0012670003
Tumor
0.3
CPT0078840001
Normal
0.3
CPT0092310003
Normal
0.3
CPT0010110003
Tumor
0.3
CPT0088690003
Tumor
0.3
CPT0088630003
Tumor
0.3
CPT0024670003
Tumor
0.3
CPT0078660003
Tumor
0.3
CPT0088710001
Normal
0.3
CPT0065450001
Normal
0.3
CPT0089460004
Tumor
0.3
CPT0000890001
Normal
0.3
CPT0015810003
Tumor
0.3
CPT0007320003
Tumor
0.3
CPT0001510001
Normal
0.3
CPT0065820001
Normal
0.2
CPT0023710001
Normal
0.2
CPT0075560003
Tumor
0.2
CPT0086360003
Tumor
0.2
CPT0025290003
Tumor
0.2
CPT0088500001
Normal
0.2
CPT0088920001
Normal
0.2
CPT0000790001
Normal
0.2
CPT0026420001
Normal
0.2
CPT0025230003
Tumor
0.2
CPT0078670001
Normal
0.2
CPT0087040003
Tumor
0.2
CPT0006730001
Normal
0.2
CPT0065750003
Tumor
0.2
CPT0092730003
Tumor
0.1
CPT0089480003
Normal
0.1
CPT0081620001
Normal
0.1
CPT0001230001
Normal
0.1
CPT0077110003
Tumor
0.1
CPT0077500001
Normal
0.1
CPT0000640003
Tumor
0.1
CPT0001350001
Normal
0.1
CPT0064400001
Normal
0.1
CPT0079480003
Tumor
0.1
CPT0079430001
Normal
0.1
CPT0087050003
Normal
0.1
CPT0001340003
Tumor
0.1
CPT0015910003
Tumor
0.1
CPT0079510001
Normal
0.0
CPT0014450004
Tumor
0.0
CPT0069000003
Tumor
0.0
CPT0066430001
Normal
0.0
CPT0088780001
Normal
0.0
CPT0065810003
Tumor
0.0
CPT0078940001
Normal
0.0
CPT0088640003
Normal
0.0
CPT0092740003
Normal
0.0
CPT0089020003
Tumor
0.0
CPT0002370001
Normal
0.0
CPT0089040001
Normal
0.0
CPT0014160003
Tumor
0.0
CPT0086970003
Normal
0.0
CPT0001220008
Tumor
0.0
CPT0025170003
Tumor
0.0
CPT0002270011
Tumor
0.0
CPT0078510003
Tumor
0.0
CPT0063320003
Tumor
-0.1
CPT0079000001
Normal
-0.1
CPT0006630003
Tumor
-0.1
CPT0001190001
Normal
-0.1
CPT0075570001
Normal
-0.1
CPT0066470004
Tumor
-0.1
CPT0076350001
Normal
-0.1
CPT0025920001
Normal
-0.1
CPT0023690003
Tumor
-0.1
CPT0063330001
Normal
-0.1
CPT0079300001
Normal
-0.1
CPT0077140001
Normal
-0.1
CPT0013790003
Normal
-0.1
CPT0020020001
Normal
-0.1
CPT0078530001
Normal
-0.1
CPT0020130001
Normal
-0.1
CPT0088570001
Normal
-0.1
CPT0069010001
Normal
-0.1
CPT0066520001
Normal
-0.1
CPT0079230003
Tumor
-0.1
CPT0069190001
Normal
-0.1
CPT0014470001
Normal
-0.1
CPT0079410003
Tumor
-0.2
CPT0006440003
Tumor
-0.2
CPT0006530001
Normal
-0.2
CPT0082010001
Normal
-0.2
CPT0025350003
Tumor
-0.2
CPT0081600003
Tumor
-0.2
CPT0007860003
Tumor
-0.2
CPT0025610001
Normal
-0.2
CPT0092290003
Tumor
-0.2
CPT0025880003
Tumor
-0.2
CPT0063640001
Normal
-0.2
CPT0088900003
Tumor
-0.2
CPT0086370003
Normal
-0.2
CPT0019160001
Normal
-0.2
CPT0019990003
Tumor
-0.2
CPT0086030003
Tumor
-0.2
CPT0014130001
Normal
-0.2
CPT0088550004
Tumor
-0.2
CPT0010120001
Normal
-0.2
CPT0066480003
Tumor
-0.2
CPT0001550001
Normal
-0.2
CPT0069160003
Tumor
-0.3
CPT0007870001
Normal
-0.3
CPT0014350001
Normal
-0.3
CPT0012370003
Tumor
-0.3
CPT0007470001
Normal
-0.3
CPT0078990003
Tumor
-0.3
CPT0086830003
Normal
-0.3
CPT0000660001
Normal
-0.3
CPT0025060001
Normal
-0.3
CPT0088760003
Tumor
-0.3
CPT0010160003
Tumor
-0.3
CPT0026410003
Tumor
-0.3
CPT0086890003
Normal
-0.3
CPT0001260009
Tumor
-0.3
CPT0000870016
Tumor
-0.3
CPT0075720003
Tumor
-0.3
CPT0078930003
Tumor
-0.4
CPT0065930003
Tumor
-0.4
CPT0012290003
Normal
-0.4
CPT0088970003
Tumor
-0.4
CPT0077320001
Normal
-0.4
CPT0084590001
Normal
-0.4
CPT0065870003
Tumor
-0.4
CPT0071150004
Tumor
-0.4
CPT0065690003
Tumor
-0.4
CPT0006900003
Tumor
-0.4
CPT0077490003
Tumor
-0.4
CPT0001540009
Tumor
-0.4
CPT0092160003
Tumor
-0.5
CPT0019130003
Tumor
-0.5
CPT0012090003
Normal
-0.5
CPT0084560003
Tumor
-0.5
CPT0081990003
Tumor
-0.5
CPT0014370004
Tumor
-0.5
CPT0012570003
Normal
-0.5
CPT0012640003
Normal
-0.5
CPT0079380003
Tumor
-0.6
CPT0001500009
Tumor
-0.6
CPT0064370003
Tumor
-0.6
CPT0025050003
Tumor
-0.6
CPT0012080003
Tumor
-0.6
CPT0012770003
Normal
-0.6
CPT0086870003
Tumor
-0.6
CPT0079180003
Tumor
-0.6
CPT0075170001
Normal
-0.6
CPT0024680001
Normal
-0.6
CPT0017850003
Tumor
-0.6
CPT0092190003
Normal
-0.6
CPT0092790003
Tumor
-0.7
CPT0085670003
Tumor
-0.7
CPT0000780007
Tumor
-0.7
CPT0018250001
Normal
-1.0
CPT0001270001
Normal
-1.1
CPT0011240003
Tumor
-1.3
CPT0012920003
Normal
N/A
CPT0021240003
Tumor
N/A
CPT0012900004
Tumor
N/A
CPT0009000003
Tumor
N/A
CPT0009020003
Normal
N/A
CPT0017410003
Tumor
N/A
CPT0017450001
Normal
N/A
CPT0009080003
Normal
N/A
CPT0009060003
Tumor
N/A
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
