We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
WDR43 is validated prognostic, high expression is unfavorable in Liver Hepatocellular Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
8.2
Number of samples
362
Samples
Sample
Description
TPM
TCGA-XR-A8TF-01A
0 years, male, white, stage:Stage I, dead, 693 days
26.3
TCGA-DD-A73D-01A
0 years, female, white, stage:Stage II, alive, 693 days
24.4
TCGA-CC-5258-01A
0 years, male, asian, stage:Stage II, dead, 129 days
24.0
TCGA-DD-A1EL-01A
0 years, male, black or african american, stage:Stage II, dead, 415 days
21.4
TCGA-5R-AA1C-01A
0 years, male, white, stage:Stage II, alive, 520 days
21.3
TCGA-CC-5263-01A
0 years, male, asian, stage:Stage IIIA, dead, 129 days
21.0
TCGA-ED-A7PX-01A
0 years, female, asian, stage:Stage II, alive, 6 days
20.8
TCGA-DD-AA3A-01A
0 years, female, white, stage:Stage I, dead, 410 days
20.6
TCGA-CC-A1HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 101 days
20.5
TCGA-CC-A7IJ-01A
0 years, male, asian, stage:Stage II, alive, 382 days
20.3
TCGA-CC-A3M9-01A
0 years, male, asian, stage:Stage IIIA, dead, 300 days
19.9
TCGA-BC-A10W-01A
0 years, male, asian, stage:'--, dead, 91 days
19.6
TCGA-CC-5260-01A
0 years, female, asian, stage:Stage IIIC, dead, 87 days
19.3
TCGA-ZP-A9D2-01A
0 years, male, white, stage:'--, dead, 765 days
19.0
TCGA-CC-A9FS-01A
0 years, male, asian, stage:Stage II, alive, 211 days
18.3
TCGA-DD-A4NA-01A
0 years, female, white, stage:Stage IIIC, alive, 1008 days
18.1
TCGA-CC-5264-01A
0 years, male, asian, stage:Stage IIIA, dead, 102 days
17.9
TCGA-DD-A1EE-01A
0 years, male, white, stage:Stage IIIA, dead, 349 days
17.7
TCGA-ED-A97K-01A
0 years, male, asian, stage:Stage IIIA, alive, 6 days
17.5
TCGA-DD-A1EH-01A
0 years, male, white, stage:Stage III, alive, 1495 days
16.9
TCGA-ED-A82E-01A
0 years, female, asian, stage:Stage IIIA, alive, 408 days
16.7
TCGA-ED-A5KG-01A
0 years, female, asian, stage:Stage II, alive, 854 days
16.4
TCGA-DD-A1EJ-01A
0 years, female, white, stage:Stage IIIC, dead, 1005 days
16.4
TCGA-DD-AACZ-01A
0 years, female, asian, stage:Stage I, dead, 171 days
16.4
TCGA-G3-AAV4-01A
0 years, female, white, stage:Stage I, dead, 27 days
16.3
TCGA-5C-A9VG-01A
0 years, male, white, stage:Stage II, alive, 328 days
16.2
TCGA-CC-A7IK-01A
0 years, male, asian, stage:Stage IIIA, dead, 262 days
16.1
TCGA-G3-A7M9-01A
0 years, male, white, stage:Stage IIIB, dead, 56 days
15.9
TCGA-XR-A8TC-01A
0 years, female, white, stage:Stage I, alive, 1339 days
15.9
TCGA-DD-AACN-01A
0 years, male, asian, stage:Stage I, alive, 1302 days
15.9
TCGA-DD-AADC-01A
0 years, male, asian, stage:Stage I, dead, 425 days
15.0
TCGA-G3-AAV1-01A
0 years, male, asian, stage:Stage IIIC, dead, 359 days
14.9
TCGA-DD-AADR-01A
0 years, male, asian, stage:Stage I, alive, 2028 days
14.9
TCGA-K7-AAU7-01A
0 years, male, white, stage:Stage II, alive, 359 days
14.8
TCGA-ZP-A9D1-01A
0 years, female, white, stage:'--, alive, 21 days
14.4
TCGA-UB-A7MA-01A
0 years, female, white, stage:Stage II, alive, 848 days
14.0
TCGA-XR-A8TE-01A
0 years, male, white, stage:Stage IIIA, alive, 925 days
14.0
TCGA-DD-AACH-01A
0 years, male, asian, stage:Stage II, dead, 195 days
13.8
TCGA-DD-AAD1-01A
0 years, female, asian, stage:Stage I, alive, 564 days
13.8
TCGA-2Y-A9H2-01A
0 years, female, white, stage:Stage I, alive, 1731 days
13.7
TCGA-BC-A8YO-01A
0 years, female, white, stage:Stage IIIC, alive, 562 days
13.5
TCGA-DD-A1EF-01A
0 years, female, white, stage:Stage I, dead, 394 days
13.4
TCGA-DD-AADB-01A
0 years, male, asian, stage:Stage I, alive, 1242 days
13.4
TCGA-DD-A1EA-01A
0 years, male, asian, stage:Stage II, alive, 2415 days
13.4
TCGA-UB-A7MC-01A
0 years, male, white, stage:Stage IIIA, alive, 500 days
13.4
TCGA-BC-A10T-01A
0 years, male, white, stage:'--, dead, 837 days
13.4
TCGA-DD-AAD5-01A
0 years, male, asian, stage:Stage I, alive, 1345 days
13.2
TCGA-DD-AADW-01A
0 years, male, asian, stage:Stage I, alive, 587 days
13.1
TCGA-CC-A8HS-01A
0 years, male, asian, stage:Stage IIIC, dead, 300 days
13.0
TCGA-2Y-A9GS-01A
0 years, male, white, stage:'--, dead, 724 days
12.9
TCGA-DD-AACK-01A
0 years, male, asian, stage:Stage I, alive, 9 days
12.8
TCGA-DD-AADP-01A
0 years, male, asian, stage:Stage I, alive, 458 days
12.7
TCGA-CC-5261-01A
0 years, male, asian, stage:Stage II, dead, 97 days
12.5
TCGA-G3-A25U-01A
0 years, female, asian, stage:Stage I, alive, 1636 days
12.5
TCGA-DD-A1EC-01A
0 years, female, white, stage:Stage I, alive, 602 days
12.5
TCGA-G3-A25Y-01A
0 years, female, asian, stage:Stage I, dead, 452 days
12.4
TCGA-BC-A112-01A
0 years, male, white, stage:'--, dead, 153 days
12.3
TCGA-DD-A4NJ-01A
0 years, female, white, stage:Stage II, alive, 928 days
12.3
TCGA-DD-A3A4-01A
0 years, male, white, stage:Stage IIIA, dead, 612 days
12.3
TCGA-DD-AAD6-01A
0 years, male, asian, stage:Stage IIIA, alive, 672 days
12.1
TCGA-DD-AAVZ-01A
0 years, male, asian, stage:Stage I, alive, 1900 days
12.1
TCGA-UB-A7MB-01A
0 years, male, white, stage:Stage II, alive, 601 days
12.0
TCGA-DD-AADY-01A
0 years, female, asian, stage:Stage I, alive, 555 days
12.0
TCGA-G3-A3CK-01A
0 years, male, asian, stage:Stage I, alive, 585 days
12.0
TCGA-DD-AAW0-01A
0 years, male, asian, stage:Stage I, alive, 2015 days
11.9
TCGA-G3-A7M6-01A
0 years, female, white, stage:Stage I, alive, 632 days
11.8
TCGA-DD-A73B-01A
0 years, female, white, stage:Stage I, dead, 283 days
11.7
TCGA-CC-A3MA-01A
0 years, male, asian, stage:Stage IIIA, dead, 303 days
11.6
TCGA-CC-A7IE-01A
0 years, male, asian, stage:Stage IIIA, dead, 217 days
11.4
TCGA-DD-A11B-01A
0 years, male, white, stage:Stage I, dead, 14 days
11.3
TCGA-DD-A73C-01A
0 years, female, white, stage:Stage IIIA, alive, 701 days
11.3
TCGA-CC-A5UC-01A
0 years, male, asian, stage:Stage IIIA, dead, 347 days
11.3
TCGA-BC-A10X-01A
0 years, female, white, stage:Stage IIIA, dead, 770 days
11.2
TCGA-CC-A5UE-01A
0 years, male, asian, stage:Stage IIIB, dead, 272 days
11.0
TCGA-EP-A12J-01A
0 years, male, black or african american, stage:Stage I, alive, 570 days
10.9
TCGA-2Y-A9GY-01A
0 years, female, white, stage:Stage II, dead, 757 days
10.9
TCGA-GJ-A3OU-01A
0 years, male, white, stage:Stage I, alive, 879 days
10.9
TCGA-FV-A3R2-01A
0 years, male, white, stage:Stage I, dead, 194 days
10.9
TCGA-G3-A5SL-01A
0 years, male, white, stage:Stage II, alive, 621 days
10.9
TCGA-DD-AACP-01A
0 years, male, asian, stage:Stage I, alive, 415 days
10.8
TCGA-DD-AAC8-01A
0 years, male, asian, stage:Stage I, dead, 16 days
10.7
TCGA-DD-A1EI-01A
0 years, male, asian, stage:Stage I, alive, 183 days
10.7
TCGA-G3-A25Z-01A
0 years, male, asian, stage:Stage I, alive, 655 days
10.6
TCGA-ED-A8O6-01A
0 years, female, asian, stage:Stage IIIA, dead, 56 days
10.6
TCGA-LG-A9QC-01A
0 years, male, white, stage:Stage I, alive, 425 days
10.6
TCGA-CC-A7II-01A
0 years, male, asian, stage:Stage IIIA, alive, 399 days
10.5
TCGA-4R-AA8I-01A
0 years, male, white, stage:Stage II, dead, 262 days
10.4
TCGA-DD-A73E-01A
0 years, male, white, stage:Stage I, alive, 44 days
10.4
TCGA-DD-AAVY-01A
0 years, male, asian, stage:Stage IIIA, alive, 1970 days
10.4
TCGA-DD-AACA-01A
0 years, male, asian, stage:Stage I, alive, 2301 days
10.3
TCGA-CC-A3MB-01A
0 years, male, asian, stage:Stage IIIA, dead, 315 days
10.3
TCGA-DD-A4NS-01A
0 years, female, white, stage:Stage I, dead, 2456 days
10.3
TCGA-DD-A4NO-01A
0 years, male, white, stage:Stage I, alive, 2245 days
10.2
TCGA-FV-A23B-01A
0 years, female, white, stage:Stage II, dead, 1852 days
10.1
TCGA-DD-A4NH-01A
0 years, female, white, stage:Stage IIIB, alive, 917 days
10.0
TCGA-DD-A113-01A
0 years, female, white, stage:Stage II, alive, 2425 days
10.0
TCGA-DD-A114-01A
0 years, male, black or african american, stage:Stage II, dead, 1149 days
10.0
TCGA-ED-A7XP-01A
0 years, female, asian, stage:Stage II, alive, 400 days
10.0
TCGA-DD-AAVS-01A
0 years, male, asian, stage:Stage I, alive, 1823 days
10.0
TCGA-DD-A1EG-01A
0 years, male, white, stage:Stage I, dead, 1372 days
9.9
TCGA-ED-A627-01A
0 years, male, white, stage:Stage I, alive, 423 days
9.9
TCGA-ED-A8O5-01A
0 years, female, asian, stage:Stage IIIA, alive, 406 days
9.8
TCGA-DD-AAE2-01A
0 years, male, asian, stage:Stage I, alive, 638 days
9.7
TCGA-WX-AA46-01A
0 years, male, white, stage:Stage II, alive, 756 days
9.6
TCGA-BC-A10Q-01A
0 years, female, white, stage:'--, dead, 1135 days
9.6
TCGA-DD-A4NR-01A
0 years, female, white, stage:Stage I, dead, 9 days
9.6
TCGA-CC-A9FW-01A
0 years, male, asian, stage:Stage IIIA, alive, 248 days
9.6
TCGA-RC-A6M6-01A
0 years, male, white, stage:Stage II, alive, 9 days
9.6
TCGA-ED-A66X-01A
0 years, male, asian, stage:Stage IIIA, alive, 406 days
9.6
TCGA-DD-A4ND-01A
0 years, female, white, stage:Stage I, alive, 2746 days
9.4
TCGA-ED-A66Y-01A
0 years, female, asian, stage:Stage IIIA, dead, 296 days
9.4
TCGA-CC-A8HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 140 days
9.4
TCGA-DD-AAW1-01A
0 years, male, asian, stage:Stage IIIA, alive, 1989 days
9.3
TCGA-DD-AACW-01A
0 years, male, asian, stage:Stage I, alive, 1424 days
9.2
TCGA-PD-A5DF-01A
0 years, female, white, stage:Stage IIIB, dead, 639 days
9.2
TCGA-DD-AADD-01A
0 years, male, asian, stage:Stage I, alive, 1231 days
9.2
TCGA-YA-A8S7-01A
0 years, male, white, stage:Stage IIIA, dead, 412 days
9.1
TCGA-BC-A5W4-01A
0 years, male, white, stage:Stage IIIA, dead, 547 days
9.0
TCGA-2Y-A9GX-01A
0 years, male, white, stage:Stage I, alive, 2442 days
9.0
TCGA-G3-AAV7-01A
0 years, male, asian, stage:Stage II, alive, 361 days
9.0
TCGA-BC-A10U-01A
0 years, male, white, stage:'--, dead, 837 days
9.0
TCGA-BC-A10R-01A
0 years, female, white, stage:'--, dead, 308 days
8.9
TCGA-ZP-A9D4-01A
0 years, female, white, stage:'--, alive, 395 days
8.9
TCGA-FV-A3I1-01A
0 years, female, white, stage:Stage II, dead, 247 days
8.9
TCGA-FV-A3R3-01A
0 years, female, white, stage:Stage I, dead, 366 days
8.8
TCGA-G3-AAV5-01A
0 years, male, white, stage:Stage II, alive, 354 days
8.8
TCGA-2Y-A9HA-01A
0 years, male, white, stage:Stage II, dead, 36 days
8.7
TCGA-XR-A8TG-01A
0 years, male, white, stage:Stage I, alive, 898 days
8.7
TCGA-DD-AAVW-01A
0 years, male, asian, stage:Stage I, alive, 2317 days
8.7
TCGA-DD-AACL-01A
0 years, female, asian, stage:Stage I, dead, 107 days
8.6
TCGA-UB-AA0U-01A
0 years, male, white, stage:Stage II, alive, 327 days
8.5
TCGA-DD-AAW3-01A
0 years, male, asian, stage:Stage I, alive, 1633 days
8.5
TCGA-ZS-A9CG-01A
0 years, male, white, stage:Stage II, alive, 341 days
8.5
TCGA-DD-AACX-01A
0 years, male, asian, stage:Stage II, alive, 170 days
8.5
TCGA-G3-A5SJ-01A
0 years, male, white, stage:Stage I, alive, 698 days
8.5
TCGA-DD-A4NQ-01A
0 years, male, white, stage:Stage II, dead, 373 days
8.4
TCGA-2Y-A9GZ-01A
0 years, female, white, stage:Stage II, dead, 848 days
8.4
TCGA-ZP-A9CV-01A
0 years, male, white, stage:'--, dead, 1088 days
8.3
TCGA-DD-A4NF-01A
0 years, male, white, stage:Stage I, alive, 942 days
8.3
TCGA-EP-A3RK-01A
0 years, male, white, stage:Stage IIIA, alive, 363 days
8.2
TCGA-DD-A118-01A
0 years, female, white, stage:Stage II, alive, 3437 days
8.2
TCGA-2Y-A9H5-01A
0 years, female, white, stage:Stage I, dead, 555 days
8.2
TCGA-CC-5262-01A
0 years, male, asian, stage:Stage IIIC, dead, 103 days
8.2
TCGA-BC-A110-01A
0 years, female, black or african american, stage:'--, dead, 2116 days
8.1
TCGA-DD-AAVX-01A
0 years, male, asian, stage:Stage II, alive, 1718 days
8.1
TCGA-LG-A6GG-01A
0 years, female, white, stage:Stage II, alive, 387 days
8.1
TCGA-MI-A75I-01A
0 years, male, black or african american, stage:'--, alive, 630 days
8.1
TCGA-ZS-A9CF-01A
0 years, male, white, stage:Stage II, alive, 2412 days
8.1
TCGA-CC-A5UD-01A
0 years, male, asian, stage:Stage IIIA, dead, 304 days
8.1
TCGA-UB-AA0V-01A
0 years, female, white, stage:Stage I, alive, 314 days
8.0
TCGA-UB-A7MD-01A
0 years, male, black or african american, stage:Stage I, dead, 52 days
8.0
TCGA-5R-AAAM-01A
0 years, female, white, stage:Stage II, dead, 46 days
8.0
TCGA-ZP-A9D0-01A
0 years, female, black or african american, stage:'--, alive, 1091 days
8.0
TCGA-BD-A3ER-01A
0 years, male, white, stage:Stage II, alive, 1115 days
7.9
TCGA-5R-AA1D-01A
0 years, female, white, stage:Stage IIIA, alive, 449 days
7.9
TCGA-EP-A2KC-01A
0 years, male, black or african american, stage:Stage I, dead, 19 days
7.9
TCGA-DD-AAVV-01A
0 years, male, asian, stage:Stage II, alive, 2455 days
7.9
TCGA-DD-AACU-01A
0 years, male, asian, stage:Stage I, alive, 1567 days
7.9
TCGA-CC-A8HV-01A
0 years, female, asian, stage:Stage II, dead, 279 days
7.9
TCGA-G3-A6UC-01A
0 years, male, white, stage:Stage IIIB, alive, 671 days
7.9
TCGA-MR-A8JO-01A
0 years, male, white, stage:Stage I, alive, 330 days
7.8
TCGA-FV-A3I0-01A
0 years, female, white, stage:Stage II, alive, 848 days
7.8
TCGA-ZS-A9CD-01A
0 years, male, white, stage:Stage II, dead, 1386 days
7.8
TCGA-5C-A9VH-01A
0 years, male, white, stage:Stage I, alive, 322 days
7.8
TCGA-FV-A4ZQ-01A
0 years, male, white, stage:Stage I, alive, 12 days
7.7
TCGA-RG-A7D4-01A
0 years, male, black or african american, stage:Stage II, alive, 1098 days
7.7
TCGA-DD-AADG-01A
0 years, male, asian, stage:Stage IIIA, alive, 1145 days
7.7
TCGA-DD-A39Y-01A
0 years, male, asian, stage:Stage I, dead, 171 days
7.6
TCGA-G3-A5SI-01A
0 years, male, asian, stage:Stage II, dead, 768 days
7.6
TCGA-EP-A26S-01A
0 years, male, white, stage:Stage I, alive, 608 days
7.5
TCGA-DD-AAEK-01A
0 years, male, asian, stage:Stage II, alive, 1067 days
7.5
TCGA-DD-AAE1-01A
0 years, male, asian, stage:Stage I, alive, 552 days
7.5
TCGA-G3-AAV6-01A
0 years, female, white, stage:Stage IIIA, dead, 65 days
7.5
TCGA-DD-AADV-01A
0 years, male, asian, stage:Stage I, alive, 574 days
7.5
TCGA-BC-A216-01A
0 years, female, white, stage:Stage IIIA, alive, 1351 days
7.5
TCGA-G3-A25T-01A
0 years, female, white, stage:Stage IIIA, alive, 1553 days
7.4
TCGA-DD-A4NB-01A
0 years, male, white, stage:Stage I, alive, 989 days
7.4
TCGA-DD-A4NG-01A
0 years, male, white, stage:Stage IIIA, dead, 802 days
7.4
TCGA-DD-AAEI-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
7.4
TCGA-BC-A3KG-01A
0 years, female, white, stage:Stage II, alive, 680 days
7.4
TCGA-DD-A4NE-01A
0 years, female, white, stage:Stage IIIA, dead, 660 days
7.4
TCGA-DD-A4NK-01A
0 years, female, white, stage:Stage IIIA, dead, 1210 days
7.3
TCGA-2Y-A9GW-01A
0 years, male, white, stage:Stage I, dead, 1271 days
7.2
TCGA-CC-A7IH-01A
0 years, male, asian, stage:Stage IIIA, alive, 365 days
7.1
TCGA-2Y-A9GV-01A
0 years, female, white, stage:Stage I, dead, 2532 days
7.1
TCGA-2Y-A9H4-01A
0 years, male, black or african american, stage:Stage I, alive, 1452 days
7.1
TCGA-FV-A2QQ-01A
0 years, male, white, stage:Stage I, alive, 729 days
7.0
TCGA-G3-A3CH-01A
0 years, male, asian, stage:Stage IIIA, alive, 780 days
7.0
TCGA-DD-A1EB-01A
0 years, female, stage:Stage I, alive, 2017 days
7.0
TCGA-DD-A73A-01A
0 years, male, white, stage:Stage I, alive, 728 days
7.0
TCGA-DD-A39W-01A
0 years, female, white, stage:Stage III, dead, 827 days
6.9
TCGA-QA-A7B7-01A
0 years, male, black or african american, stage:Stage II, alive, 94 days
6.9
TCGA-DD-AACS-01A
0 years, male, asian, stage:Stage I, alive, 1804 days
6.9
TCGA-DD-AACY-01A
0 years, male, asian, stage:Stage I, alive, 1450 days
6.9
TCGA-DD-A4NV-01A
0 years, male, white, stage:Stage IIIA, alive, 2398 days
6.9
TCGA-BC-A10Z-01A
0 years, female, white, stage:Stage I, dead, 34 days
6.8
TCGA-DD-A3A1-01A
0 years, male, stage:Stage IIIA, dead, 233 days
6.8
TCGA-DD-AAEH-01A
0 years, male, asian, stage:Stage I, alive, 784 days
6.8
TCGA-DD-AADL-01A
0 years, male, asian, stage:Stage I, alive, 636 days
6.8
TCGA-MI-A75G-01A
0 years, male, white, stage:Stage II, alive, 698 days
6.7
TCGA-EP-A2KA-01A
0 years, female, white, stage:Stage IIIA, dead, 627 days
6.7
TCGA-G3-A7M5-01A
0 years, male, asian, stage:Stage I, alive, 447 days
6.6
TCGA-XR-A8TD-01A
0 years, female, white, stage:Stage IIIB, alive, 1030 days
6.6
TCGA-DD-A4NN-01A
0 years, female, white, stage:Stage I, dead, 899 days
6.6
TCGA-3K-AAZ8-01A
0 years, male, black or african american, stage:Stage IIIB, alive, 396 days
6.6
TCGA-DD-AAE0-01A
0 years, female, asian, stage:Stage IIIA, alive, 555 days
6.6
TCGA-DD-AAW2-01A
0 years, male, asian, stage:Stage I, alive, 1855 days
6.4
TCGA-GJ-A9DB-01A
0 years, male, white, stage:Stage I, dead, 67 days
6.4
TCGA-DD-AAD0-01A
0 years, female, asian, stage:Stage I, alive, 137 days
6.4
TCGA-WX-AA44-01A
0 years, female, white, stage:Stage I, alive, 615 days
6.4
TCGA-BC-A217-01A
0 years, female, white, stage:Stage II, dead, 1397 days
6.4
TCGA-2Y-A9H0-01A
0 years, male, white, stage:Stage IIIA, alive, 3675 days
6.4
TCGA-DD-A4NI-01A
0 years, male, white, stage:Stage II, alive, 816 days
6.3
TCGA-DD-AAED-01A
0 years, male, asian, stage:Stage I, alive, 763 days
6.3
TCGA-DD-AACV-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
6.3
TCGA-EP-A2KB-01A
0 years, female, white, stage:Stage I, dead, 596 days
6.3
TCGA-WQ-A9G7-01A
0 years, female, white, stage:'--, alive, 30 days
6.3
TCGA-2Y-A9H7-01A
0 years, female, white, stage:Stage I, alive, 1168 days
6.2
TCGA-BC-A3KF-01A
0 years, female, white, stage:Stage I, alive, 8 days
6.2
TCGA-G3-A25V-01A
0 years, male, white, stage:Stage I, alive, 860 days
6.1
TCGA-ED-A7PY-01A
0 years, female, asian, stage:Stage II, alive, 390 days
6.1
TCGA-ED-A459-01A
0 years, male, asian, stage:Stage II, alive, 910 days
6.1
TCGA-DD-AACI-01A
0 years, male, asian, stage:Stage II, alive, 1618 days
6.1
TCGA-KR-A7K7-01A
0 years, female, white, stage:Stage II, alive, 951 days
6.1
TCGA-CC-A123-01A
0 years, female, asian, stage:Stage IIIA, alive, 219 days
6.1
TCGA-DD-AAE3-01A
0 years, male, asian, stage:Stage I, alive, 566 days
6.0
TCGA-2Y-A9HB-01A
0 years, male, stage:Stage I, alive, 260 days
6.0
TCGA-BD-A3EP-01A
0 years, female, black or african american, stage:Stage I, alive, 409 days
6.0
TCGA-BC-A69I-01A
0 years, male, white, stage:Stage I, alive, 387 days
6.0
TCGA-K7-A5RG-01A
0 years, male, black or african american, stage:Stage I, alive, 519 days
6.0
TCGA-KR-A7K0-01A
0 years, male, white, stage:Stage I, dead, 65 days
6.0
TCGA-DD-AACB-01A
0 years, female, asian, stage:Stage I, alive, 2324 days
5.9
TCGA-CC-A8HU-01A
0 years, female, asian, stage:Stage IIIA, dead, 344 days
5.9
TCGA-DD-AAEG-01A
0 years, female, asian, stage:Stage I, alive, 719 days
5.9
TCGA-RC-A6M4-01A
0 years, female, white, stage:Stage IIIA, alive, 22 days
5.9
TCGA-G3-A7M7-01A
0 years, male, white, stage:Stage I, alive, 361 days
5.9
TCGA-DD-AADO-01A
0 years, male, asian, stage:Stage I, alive, 453 days
5.9
TCGA-G3-A5SK-01A
0 years, male, white, stage:Stage I, alive, 744 days
5.9
TCGA-BW-A5NO-01A
0 years, male, black or african american, stage:Stage IIIA, alive, 20 days
5.8
TCGA-ZP-A9CZ-01A
0 years, male, asian, stage:'--, alive, 706 days
5.8
TCGA-DD-AAVP-01A
0 years, male, asian, stage:Stage I, alive, 2752 days
5.8
TCGA-FV-A496-01A
0 years, female, white, stage:Stage I, alive, 10 days
5.7
TCGA-MI-A75C-01A
0 years, male, white, stage:Stage I, alive, 291 days
5.7
TCGA-DD-AAD2-01A
0 years, male, asian, stage:Stage I, alive, 658 days
5.7
TCGA-DD-AAD3-01A
0 years, male, asian, stage:Stage I, alive, 1295 days
5.7
TCGA-DD-A1ED-01A
0 years, male, white, stage:Stage I, alive, 2301 days
5.7
TCGA-G3-AAV3-01A
0 years, female, white, stage:Stage II, alive, 412 days
5.6
TCGA-DD-AACD-01A
0 years, male, asian, stage:Stage I, dead, 381 days
5.6
TCGA-G3-A25X-01A
0 years, male, asian, stage:Stage II, alive, 1779 days
5.6
TCGA-BC-A10S-01A
0 years, male, white, stage:'--, dead, 1423 days
5.6
TCGA-FV-A2QR-01A
0 years, male, white, stage:Stage I, dead, 581 days
5.5
TCGA-RC-A7SH-01A
0 years, male, asian, stage:Stage II, alive, 468 days
5.5
TCGA-DD-AACJ-01A
0 years, male, asian, stage:Stage II, alive, 2102 days
5.5
TCGA-DD-AACG-01A
0 years, male, asian, stage:Stage II, dead, 469 days
5.5
TCGA-HP-A5MZ-01A
0 years, male, stage:Stage I, dead, 91 days
5.5
TCGA-G3-A3CI-01A
0 years, male, white, stage:Stage I, alive, 180 days
5.5
TCGA-CC-A7IG-01A
0 years, male, asian, stage:Stage II, dead, 299 days
5.5
TCGA-DD-AAVR-01A
0 years, male, asian, stage:Stage I, alive, 2513 days
5.4
TCGA-DD-AADI-01A
0 years, female, asian, stage:Stage I, alive, 1085 days
5.4
TCGA-DD-AACQ-01A
0 years, male, asian, stage:Stage II, dead, 432 days
5.4
TCGA-RC-A7SB-01A
0 years, male, asian, stage:Stage II, alive, 588 days
5.3
TCGA-DD-A1EK-01A
0 years, female, white, stage:Stage IVB, dead, 558 days
5.3
TCGA-DD-A39V-01A
0 years, male, white, stage:Stage II, dead, 643 days
5.3
TCGA-DD-AADQ-01A
0 years, male, asian, stage:Stage II, alive, 436 days
5.3
TCGA-G3-A25S-01A
0 years, male, white, stage:Stage I, dead, 416 days
5.2
TCGA-GJ-A6C0-01A
0 years, female, white, stage:Stage II, dead, 31 days
5.2
TCGA-DD-A11C-01A
0 years, male, white, stage:Stage I, alive, 662 days
5.2
TCGA-2Y-A9H9-01A
0 years, male, white, stage:Stage I, alive, 697 days
5.2
TCGA-DD-AAVU-01A
0 years, male, asian, stage:Stage II, alive, 2202 days
5.2
TCGA-BC-A10Y-01A
0 years, male, white, stage:'--, dead, 711 days
5.2
TCGA-DD-A115-01A
0 years, male, white, stage:Stage IIIA, dead, 2542 days
5.2
TCGA-CC-A3MC-01A
0 years, male, asian, stage:Stage IIIA, alive, 363 days
5.2
TCGA-DD-AAD8-01A
0 years, female, asian, stage:Stage I, alive, 1219 days
5.2
TCGA-DD-AAVQ-01A
0 years, male, asian, stage:Stage I, alive, 2728 days
5.1
TCGA-RC-A7SK-01A
0 years, male, asian, stage:Stage I, alive, 472 days
5.1
TCGA-ED-A4XI-01A
0 years, male, asian, stage:Stage II, alive, 819 days
5.1
TCGA-ED-A7XO-01A
0 years, male, asian, stage:Stage IIIA, alive, 427 days
5.1
TCGA-G3-AAV2-01A
0 years, male, white, stage:Stage I, alive, 372 days
5.1
TCGA-DD-A116-01A
0 years, male, asian, stage:Stage IIIA, dead, 1622 days
5.1
TCGA-2Y-A9H6-01A
0 years, female, white, stage:Stage I, alive, 357 days
5.1
TCGA-MI-A75H-01A
0 years, male, white, stage:'--, alive, 747 days
5.0
TCGA-G3-A3CG-01A
0 years, male, white, stage:Stage I, alive, 673 days
4.9
TCGA-DD-AAEA-01A
0 years, male, asian, stage:Stage I, alive, 575 days
4.9
TCGA-HP-A5N0-01A
0 years, female, stage:'--, dead, 752 days
4.9
TCGA-2Y-A9GU-01A
0 years, female, white, stage:Stage I, alive, 1939 days
4.9
TCGA-DD-A3A8-01A
0 years, male, white, stage:Stage II, dead, 11 days
4.8
TCGA-UB-A7ME-01A
0 years, male, asian, stage:Stage I, alive, 486 days
4.8
TCGA-DD-A11D-01A
0 years, female, white, stage:Stage I, dead, 1560 days
4.8
TCGA-ZP-A9CY-01A
0 years, female, white, stage:'--, alive, 782 days
4.8
TCGA-DD-AADN-01A
0 years, male, asian, stage:Stage I, alive, 898 days
4.6
TCGA-DD-AADJ-01A
0 years, female, asian, stage:Stage I, alive, 1066 days
4.6
TCGA-LG-A9QD-01A
0 years, male, white, stage:Stage IIIA, alive, 366 days
4.5
TCGA-DD-AACC-01A
0 years, male, asian, stage:Stage I, dead, 1685 days
4.5
TCGA-DD-AACT-01A
0 years, female, asian, stage:Stage I, alive, 1562 days
4.5
TCGA-ZS-A9CE-01A
0 years, female, white, stage:Stage II, alive, 1241 days
4.4
TCGA-MI-A75E-01A
0 years, male, white, stage:Stage IIIC, alive, 507 days
4.4
TCGA-NI-A8LF-01A
0 years, male, white, stage:Stage I, alive, 799 days
4.4
TCGA-CC-A7IL-01A
0 years, male, asian, stage:Stage IIIA, dead, 278 days
4.4
TCGA-5C-AAPD-01A
0 years, male, asian, stage:Stage II, alive, 20 days
4.3
TCGA-DD-AACF-01A
0 years, male, asian, stage:Stage I, dead, 365 days
4.3
TCGA-NI-A4U2-01A
0 years, male, white, stage:Stage IIIA, dead, 1791 days
4.3
TCGA-DD-AAE9-01A
0 years, male, asian, stage:Stage I, alive, 722 days
4.3
TCGA-BC-A69H-01A
0 years, male, white, stage:Stage II, alive, 444 days
4.3
TCGA-G3-AAV0-01A
0 years, male, asian, stage:Stage I, alive, 476 days
4.3
TCGA-MR-A520-01A
0 years, male, white, stage:Stage I, alive, 229 days
4.3
TCGA-G3-A7M8-01A
0 years, male, asian, stage:Stage I, alive, 430 days
4.3
TCGA-DD-AADF-01A
0 years, female, asian, stage:Stage I, dead, 115 days
4.2
TCGA-DD-AADA-01A
0 years, female, asian, stage:Stage I, alive, 1233 days
4.2
TCGA-DD-A119-01A
0 years, male, asian, stage:Stage IV, dead, 223 days
4.2
TCGA-DD-AAEE-01A
0 years, male, asian, stage:Stage I, alive, 810 days
4.2
TCGA-CC-A7IF-01A
0 years, male, asian, stage:Stage IIIA, dead, 649 days
4.2
TCGA-RC-A7SF-01A
0 years, male, asian, stage:Stage I, alive, 579 days
4.2
TCGA-DD-AAE7-01A
0 years, male, asian, stage:Stage I, alive, 644 days
4.1
TCGA-WJ-A86L-01A
0 years, female, white, stage:Stage I, alive, 345 days
4.1
TCGA-K7-A5RF-01A
0 years, male, white, stage:Stage I, alive, 631 days
4.1
TCGA-T1-A6J8-01A
0 years, male, white, stage:'--, alive, 23 days
4.1
TCGA-KR-A7K8-01A
0 years, male, stage:Stage I, alive, 906 days
4.0
TCGA-DD-A3A6-01A
0 years, female, white, stage:Stage II, dead, 3258 days
4.0
TCGA-RC-A6M5-01A
0 years, female, white, stage:Stage IVA, alive, 15 days
4.0
TCGA-DD-AADM-01A
0 years, male, asian, stage:Stage II, dead, 12 days
4.0
TCGA-DD-A39X-01A
0 years, female, white, stage:Stage I, dead, 1694 days
4.0
TCGA-BD-A2L6-01A
0 years, male, white, stage:'--, alive, 1363 days
3.9
TCGA-ED-A7PZ-01A
0 years, male, asian, stage:Stage II, alive, 6 days
3.9
TCGA-EP-A3JL-01A
0 years, male, white, stage:Stage I, alive, 303 days
3.8
TCGA-FV-A4ZP-01A
0 years, male, white, stage:Stage IIIA, dead, 2486 days
3.8
TCGA-DD-AADK-01A
0 years, female, asian, stage:Stage II, alive, 1049 days
3.8
TCGA-DD-AADU-01A
0 years, male, asian, stage:Stage II, alive, 554 days
3.8
TCGA-DD-A4NP-01A
0 years, male, white, stage:Stage I, alive, 3308 days
3.7
TCGA-DD-A3A9-01A
0 years, female, white, stage:Stage IVB, dead, 931 days
3.7
TCGA-DD-AACE-01A
0 years, male, asian, stage:Stage I, alive, 2184 days
3.7
TCGA-2Y-A9GT-01A
0 years, male, white, stage:Stage I, dead, 1624 days
3.7
TCGA-O8-A75V-01A
0 years, male, stage:Stage I, alive, 538 days
3.7
TCGA-WX-AA47-01A
0 years, female, white, stage:Stage IIIA, dead, 556 days
3.7
TCGA-DD-A4NL-01A
0 years, male, white, stage:Stage I, alive, 1711 days
3.6
TCGA-DD-A73F-01A
0 years, female, white, stage:Stage I, alive, 1085 days
3.6
TCGA-DD-AAEB-01A
0 years, male, asian, stage:Stage I, alive, 478 days
3.5
TCGA-DD-A3A2-01A
0 years, female, white, stage:Stage I, dead, 2131 days
3.5
TCGA-DD-AACO-01A
0 years, male, asian, stage:Stage I, alive, 1876 days
3.5
TCGA-DD-AAE6-01A
0 years, female, asian, stage:Stage I, alive, 141 days
3.4
TCGA-UB-A7MF-01A
0 years, male, white, stage:Stage IIIA, dead, 214 days
3.4
TCGA-DD-A3A7-01A
0 years, male, stage:Stage IIIB, dead, 419 days
3.2
TCGA-K7-A6G5-01A
0 years, male, white, stage:Stage I, alive, 512 days
3.2
TCGA-G3-A5SM-01A
0 years, male, white, stage:Stage II, alive, 520 days
3.1
TCGA-G3-A3CJ-01A
0 years, male, american indian or alaska native, stage:Stage II, alive, 594 days
3.1
TCGA-G3-AAUZ-01A
0 years, male, stage:Stage I, alive, 480 days
3.1
TCGA-DD-A39Z-01A
0 years, female, stage:Stage II, dead, 601 days
2.9
TCGA-DD-AAE4-01A
0 years, female, asian, stage:Stage I, alive, 608 days
2.9
TCGA-KR-A7K2-01A
0 years, male, white, stage:Stage I, alive, 829 days
2.9
TCGA-2Y-A9H1-01A
0 years, male, white, stage:Stage I, dead, 1229 days
2.9
TCGA-2Y-A9H8-01A
0 years, female, white, stage:'--, dead, 633 days
2.9
TCGA-RC-A7S9-01A
0 years, female, asian, stage:Stage I, alive, 640 days
2.9
TCGA-DD-A3A3-01A
0 years, male, asian, stage:Stage I, dead, 535 days
2.8
TCGA-DD-AAC9-01A
0 years, male, asian, stage:Stage I, alive, 347 days
2.7
TCGA-DD-A3A5-01A
0 years, female, white, stage:Stage III, dead, 3125 days
2.7
TCGA-WQ-AB4B-01A
0 years, male, white, stage:Stage II, alive, 395 days
2.5
TCGA-CC-5259-01A
0 years, female, asian, stage:Stage IIIC, alive, 250 days
2.4
TCGA-DD-AADS-01A
0 years, male, asian, stage:Stage I, alive, 474 days
2.3
TCGA-DD-A73G-01A
0 years, female, white, stage:Stage I, alive, 3478 days
2.3
TCGA-2Y-A9H3-01A
0 years, male, white, stage:Stage II, alive, 1516 days
2.2
TCGA-ES-A2HT-01A
0 years, male, black or african american, stage:Stage I, dead, 438 days
2.0
TCGA-FV-A495-01A
0 years, female, white, stage:Stage II, alive, 1 days
2.0
TCGA-ES-A2HS-01A
0 years, male, white, stage:Stage I, dead, 688 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
WDR43 is validated prognostic, high expression is unfavorable in Liver Hepatocellular Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
12.3
Number of samples
231
Samples
Sample
Description
TPM
DO45117
0 years, female, NA, stage:2, dead, 1110 days
34.7
DO45237
0 years, male, NA, stage:2, alive, 900 days
34.5
DO45193
0 years, female, NA, stage:4, dead, 120 days
28.5
DO50802
0 years, male, NA, stage:2, alive, 930 days
24.5
DO48721
0 years, female, NA, stage:1, alive, 900 days
24.4
DO23523
0 years, male, NA, stage:3, alive, 1080 days
23.9
DO48727
0 years, female, NA, stage:2, dead, 390 days
23.1
DO23521
0 years, male, NA, stage:3, alive, 1110 days
22.5
DO23542
0 years, male, NA, stage:3, alive, 960 days
21.4
DO45127
0 years, male, NA, stage:3, dead, 420 days
21.3
DO45239
0 years, male, NA, stage:2, alive, 870 days
20.8
DO48730
0 years, female, NA, stage:2, alive, 630 days
20.8
DO45247
0 years, female, NA, stage:2, alive, 210 days
20.8
DO23509
0 years, male, NA, stage:3, dead, 780 days
20.7
DO48732
0 years, male, NA, stage:3, alive, 630 days
20.5
DO45283
0 years, male, NA, stage:3, alive, 510 days
20.2
DO50815
0 years, male, NA, stage:3, alive, 150 days
19.9
DO45303
0 years, female, NA, stage:3, alive, 990 days
19.9
DO45267
0 years, male, NA, stage:3, dead, 570 days
19.5
DO45175
0 years, male, NA, stage:2, alive, 1140 days
19.5
DO45299
0 years, female, NA, stage:1, alive, 1440 days
19.4
DO48681
0 years, male, NA, stage:2, alive, 900 days
19.2
DO45269
0 years, male, NA, stage:3, alive, 750 days
19.1
DO50859
0 years, male, NA, stage:2, alive, 180 days
19.1
DO45195
0 years, male, NA, stage:1, alive, 390 days
19.0
DO23530
0 years, male, NA, stage:4, dead, 180 days
18.3
DO48682
0 years, female, NA, stage:3, dead, 120 days
18.2
DO48723
0 years, male, NA, stage:1, alive, 600 days
18.1
DO23519
0 years, male, NA, stage:3, alive, 630 days
18.1
DO23543
0 years, male, NA, stage:2, alive, 1020 days
17.8
DO45145
0 years, male, NA, stage:3, dead, 60 days
17.3
DO45091
0 years, male, NA, stage:2, dead, 1320 days
17.0
DO50785
0 years, male, NA, stage:4, dead, 90 days
16.8
DO45123
0 years, female, NA, stage:2, dead, 570 days
16.7
DO45093
0 years, male, NA, stage:2, dead, 720 days
16.5
DO45213
0 years, male, NA, stage:1, alive, 1200 days
16.4
DO45227
0 years, female, NA, stage:2, alive, 1020 days
16.2
DO45165
0 years, male, NA, stage:2, alive, 690 days
16.2
DO23514
0 years, male, NA, stage:2, alive, 1290 days
15.9
DO23524
0 years, female, NA, stage:2, alive, 1050 days
15.7
DO45161
0 years, male, NA, stage:2, dead, 540 days
15.7
DO45211
0 years, male, NA, stage:3, alive, 240 days
15.5
DO50799
0 years, female, NA, stage:2, alive, 540 days
15.5
DO45129
0 years, male, NA, stage:3, alive, 1470 days
15.4
DO50829
0 years, male, NA, stage:3, alive, 570 days
15.4
DO45259
0 years, male, NA, stage:3, alive, 330 days
15.3
DO45245
0 years, female, NA, stage:2, dead, 240 days
15.1
DO45273
0 years, male, NA, stage:2, alive, 480 days
15.1
DO23510
0 years, female, NA, stage:2, alive, 870 days
15.1
DO48672
0 years, male, NA, stage:2, alive, 450 days
14.9
DO45155
0 years, male, NA, stage:2, alive, 2160 days
14.8
DO50809
0 years, male, NA, stage:3, dead, 720 days
14.6
DO45221
0 years, female, NA, stage:4, dead, 390 days
14.6
DO45173
0 years, male, NA, stage:3, alive, 1170 days
14.5
DO45219
0 years, male, NA, stage:2, alive, 1080 days
14.4
DO48720
0 years, female, NA, stage:2, alive, 570 days
14.4
DO45249
0 years, male, NA, stage:1, alive, 630 days
14.2
DO23525
0 years, male, NA, stage:4, alive, 1050 days
14.2
DO23546
0 years, male, NA, stage:2, alive, 1050 days
14.2
DO23529
0 years, male, NA, stage:4, alive, 930 days
14.2
DO45261
0 years, male, NA, stage:3, alive, 990 days
14.1
DO23547
0 years, male, NA, stage:1, alive, 1020 days
14.1
DO48697
0 years, female, NA, stage:2, dead, 810 days
14.0
DO23544
0 years, male, NA, stage:2, alive, 960 days
14.0
DO45263
0 years, male, NA, stage:3, dead, 270 days
13.9
DO45113
0 years, male, NA, stage:3, alive, 1560 days
13.8
DO23513
0 years, male, NA, stage:3, alive, 1200 days
13.8
DO45225
0 years, male, NA, stage:1, alive, 1050 days
13.7
DO50791
0 years, female, NA, stage:1, dead, 480 days
13.7
DO45189
0 years, female, NA, stage:2, alive, 1200 days
13.7
DO45199
0 years, female, NA, stage:2, alive, 1350 days
13.6
DO48746
0 years, male, NA, stage:3, alive, 570 days
13.6
DO45171
0 years, male, NA, stage:3, alive, 600 days
13.6
DO45203
0 years, female, NA, stage:2, alive, 1170 days
13.5
DO48751
0 years, male, NA, stage:2, dead, 480 days
13.4
DO23549
0 years, male, NA, stage:3, alive, 990 days
13.4
DO45157
0 years, male, NA, stage:2, alive, 1980 days
13.4
DO45205
0 years, female, NA, stage:2, dead, 90 days
13.4
DO23533
0 years, male, NA, stage:2, alive, 900 days
13.4
DO48757
0 years, female, NA, stage:3, alive, 480 days
13.3
DO48700
0 years, female, NA, stage:2, alive, 810 days
13.3
DO45297
0 years, female, NA, stage:4, dead, 1260 days
13.3
DO48704
0 years, female, NA, stage:3, alive, 750 days
13.2
DO50850
0 years, male, NA, stage:3, alive, 720 days
13.2
DO45209
0 years, male, NA, stage:4, alive, 1350 days
13.2
DO45251
0 years, female, NA, stage:2, alive, 900 days
13.1
DO50819
0 years, female, NA, stage:2, alive, 510 days
13.1
DO45275
0 years, male, NA, stage:3, dead, 10 days
13.1
DO45183
0 years, female, NA, stage:2, dead, 570 days
13.1
DO23545
0 years, male, NA, stage:2, dead, 570 days
13.1
DO45257
0 years, male, NA, stage:3, alive, 810 days
13.0
DO45137
0 years, male, NA, stage:1, alive, 1320 days
12.9
DO23528
0 years, female, NA, stage:2, alive, 1020 days
12.9
DO45307
0 years, female, NA, stage:4, dead, 240 days
12.9
DO45287
0 years, male, NA, stage:1, alive, 390 days
12.8
DO45187
0 years, female, NA, stage:1, alive, 1260 days
12.8
DO45139
0 years, male, NA, stage:3, alive, 1320 days
12.8
DO45121
0 years, male, NA, stage:3, alive, 1530 days
12.8
DO48728
0 years, female, NA, stage:2, alive, 150 days
12.7
DO45281
0 years, male, NA, stage:4, alive, 750 days
12.7
DO48737
0 years, male, NA, stage:1, alive, 720 days
12.5
DO45279
0 years, male, NA, stage:3, alive, 1290 days
12.5
DO50778
0 years, male, NA, stage:4, alive, 630 days
12.5
DO50793
0 years, male, NA, stage:4, alive, 540 days
12.4
DO45265
0 years, male, NA, stage:3, alive, 1020 days
12.4
DO45305
0 years, male, NA, stage:4, alive, 300 days
12.4
DO45217
0 years, female, NA, stage:3, dead, 270 days
12.3
DO45301
0 years, male, NA, stage:2, dead, 1440 days
12.3
DO45231
0 years, male, NA, stage:2, alive, 930 days
12.2
DO23540
0 years, male, NA, stage:1, alive, 750 days
12.1
DO45096
0 years, male, NA, stage:2, dead, 1290 days
12.1
DO45233
0 years, male, NA, stage:3, alive, 900 days
12.0
DO45133
0 years, male, NA, stage:3, dead, 660 days
12.0
DO50822
0 years, male, NA, stage:2, alive, 510 days
12.0
DO50857
0 years, male, NA, stage:2, alive, 210 days
12.0
DO50806
0 years, male, NA, stage:4, alive, 540 days
11.8
DO50789
0 years, female, NA, stage:2, alive, 570 days
11.7
DO23541
0 years, male, NA, stage:2, alive, 930 days
11.6
DO50774
0 years, female, NA, stage:2, alive, 720 days
11.5
DO45119
0 years, male, NA, stage:3, dead, 510 days
11.5
DO45163
0 years, male, NA, stage:2, alive, 960 days
11.4
DO48759
0 years, male, NA, stage:3, alive, 720 days
11.4
DO45223
0 years, male, NA, stage:4, alive, 1020 days
11.4
DO50825
0 years, male, NA, stage:2, alive, 390 days
11.4
DO50803
0 years, female, NA, stage:1, alive, 540 days
11.3
DO50804
0 years, male, NA, stage:2, alive, 720 days
11.3
DO48695
0 years, male, NA, stage:2, alive, 720 days
11.2
DO45135
0 years, male, NA, stage:1, alive, 1410 days
11.2
DO50808
0 years, male, NA, stage:2, alive, 570 days
11.2
DO45253
0 years, male, NA, stage:2, alive, 870 days
11.1
DO48717
0 years, male, NA, stage:4, dead, 180 days
11.1
DO23526
0 years, male, NA, stage:3, alive, 1050 days
11.1
DO50798
0 years, male, NA, stage:3, dead, 30 days
11.0
DO45092
0 years, male, NA, stage:4, dead, 1200 days
11.0
DO45285
0 years, male, NA, stage:3, alive, 480 days
10.8
DO50820
0 years, female, NA, stage:3, alive, 510 days
10.7
DO23552
0 years, female, NA, stage:1, alive, 810 days
10.7
DO45277
0 years, male, NA, stage:3, alive, 600 days
10.6
DO48733
0 years, male, NA, stage:2, alive, 600 days
10.6
DO23518
0 years, male, NA, stage:2, alive, 1320 days
10.6
DO45169
0 years, male, NA, stage:3, alive, 1350 days
10.5
DO48677
0 years, male, NA, stage:3, alive, 1140 days
10.5
DO48743
0 years, female, NA, stage:2, alive, 570 days
10.4
DO50832
0 years, male, NA, stage:3, alive, 90 days
10.4
DO45235
0 years, female, NA, stage:1, alive, 900 days
10.4
DO45191
0 years, female, NA, stage:2, alive, 1200 days
10.3
DO48706
0 years, male, NA, stage:2, alive, 870 days
10.3
DO45185
0 years, male, NA, stage:2, alive, 600 days
10.2
DO23508
0 years, female, NA, stage:2, alive, 390 days
10.2
DO50817
0 years, male, NA, stage:2, alive, 390 days
10.1
DO23548
0 years, female, NA, stage:1, alive, 840 days
10.1
DO23539
0 years, male, NA, stage:1, alive, 1110 days
10.1
DO50818
0 years, male, NA, stage:2, alive, 510 days
9.8
DO45131
0 years, male, NA, stage:4, dead, 360 days
9.8
DO23535
0 years, male, NA, stage:1, alive, 960 days
9.8
DO23517
0 years, male, NA, stage:2, alive, 1200 days
9.7
DO23537
0 years, male, NA, stage:2, dead, 900 days
9.7
DO50844
0 years, male, NA, stage:4, alive, 300 days
9.6
DO45153
0 years, female, NA, stage:2, alive, 1380 days
9.6
DO48736
0 years, female, NA, stage:1, alive, 600 days
9.6
DO48716
0 years, male, NA, stage:2, alive, 720 days
9.6
DO45207
0 years, male, NA, stage:1, alive, 1050 days
9.6
DO48712
0 years, male, NA, stage:2, alive, 810 days
9.5
DO45177
0 years, female, NA, stage:3, alive, 1260 days
9.5
DO48725
0 years, male, NA, stage:1, alive, 780 days
9.5
DO48761
0 years, male, NA, stage:2, alive, 870 days
9.4
DO50855
0 years, male, NA, stage:2, alive, 570 days
9.4
DO45255
0 years, male, NA, stage:3, alive, 720 days
9.4
DO23536
0 years, male, NA, stage:2, alive, 930 days
9.4
DO45141
0 years, male, NA, stage:2, alive, 1320 days
9.4
DO45159
0 years, male, NA, stage:3, alive, 1470 days
9.4
DO50800
0 years, male, NA, stage:2, alive, 510 days
9.3
DO50811
0 years, male, NA, stage:1, alive, 450 days
9.2
DO50816
0 years, male, NA, stage:2, alive, 390 days
9.2
DO23516
0 years, male, NA, stage:3, dead, 20 days
9.0
DO23515
0 years, male, NA, stage:2, alive, 1230 days
9.0
DO45111
0 years, male, NA, stage:2, alive, 1590 days
8.9
DO23551
0 years, male, NA, stage:3, dead, 150 days
8.9
DO48679
0 years, male, NA, stage:2, alive, 1200 days
8.9
DO45099
0 years, male, NA, stage:3, alive, 1590 days
8.8
DO48701
0 years, male, NA, stage:2, alive, 780 days
8.7
DO50840
0 years, male, NA, stage:2, alive, 330 days
8.6
DO227801
0 years, female, NA, stage:1, alive, 660 days
8.6
DO45243
0 years, female, NA, stage:3, alive, 930 days
8.6
DO50813
0 years, male, NA, stage:2, alive, 420 days
8.5
DO45097
0 years, male, NA, stage:3, alive, 1620 days
8.5
DO45143
0 years, male, NA, stage:3, alive, 1290 days
8.5
DO23534
0 years, male, NA, stage:2, alive, 840 days
8.5
DO45167
0 years, male, NA, stage:2, dead, 1440 days
8.4
DO45181
0 years, female, NA, stage:2, alive, 1200 days
8.3
DO45289
0 years, female, NA, stage:3, alive, 360 days
8.3
DO23538
0 years, male, NA, stage:2, alive, 450 days
8.1
DO50805
0 years, male, NA, stage:2, alive, 690 days
7.9
DO45201
0 years, male, NA, stage:1, alive, 900 days
7.9
DO23531
0 years, female, NA, stage:3, alive, 900 days
7.9
DO48719
0 years, male, NA, stage:2, alive, 690 days
7.8
DO23511
0 years, female, NA, stage:3, dead, 180 days
7.7
DO45103
0 years, male, NA, stage:3, alive, 450 days
7.7
DO50787
0 years, male, NA, stage:3, alive, 480 days
7.6
DO48742
0 years, male, NA, stage:2, alive, 600 days
7.5
DO45241
0 years, male, NA, stage:1, alive, 1080 days
7.5
DO50845
0 years, male, NA, stage:3, alive, 210 days
7.4
DO45115
0 years, male, NA, stage:2, alive, 840 days
7.2
DO23512
0 years, male, NA, stage:1, alive, 1260 days
7.1
DO45107
0 years, female, NA, stage:2, alive, 1710 days
7.0
DO50814
0 years, male, NA, stage:3, alive, 420 days
7.0
DO48715
0 years, female, NA, stage:2, dead, 690 days
6.9
DO23550
0 years, male, NA, stage:1, alive, 990 days
6.9
DO45149
0 years, female, NA, stage:2, alive, 1260 days
6.9
DO45125
0 years, male, NA, stage:3, alive, 1680 days
6.9
DO23527
0 years, male, NA, stage:1, alive, 1050 days
6.7
DO45197
0 years, male, NA, stage:2, alive, 1170 days
6.6
DO45179
0 years, female, NA, stage:2, alive, 600 days
6.5
DO48747
0 years, male, NA, stage:3, alive, 540 days
6.4
DO48693
0 years, male, NA, stage:2, alive, 900 days
6.2
DO45101
0 years, male, NA, stage:2, alive, 1680 days
6.2
DO50807
0 years, male, NA, stage:1, alive, 540 days
6.1
DO45229
0 years, male, NA, stage:1, alive, 990 days
6.1
DO48760
0 years, female, NA, stage:2, alive, 690 days
5.9
DO50776
0 years, male, NA, stage:1, alive, 690 days
5.9
DO45215
0 years, male, NA, stage:2, alive, 1170 days
5.8
DO227643
0 years, male, NA, stage:2, alive, 1260 days
5.7
DO45095
0 years, male, NA, stage:2, alive, 1620 days
5.6
DO48741
0 years, male, NA, stage:3, alive, 240 days
5.5
DO45094
0 years, male, NA, stage:3, alive, 1650 days
5.1
DO45105
0 years, male, NA, stage:1, alive, 1680 days
5.0
DO50783
0 years, male, NA, stage:3, alive, 480 days
4.9
DO23532
0 years, female, NA, stage:1, alive, 960 days
4.2
DO48674
0 years, male, NA, stage:2, alive, 1260 days
4.2
DO50839
0 years, female, NA, stage:3, alive, 330 days
4.1
DO45109
0 years, male, NA, stage:2, alive, 1590 days
3.7
Show allShow less
LIVER HEPATOCELLULAR CARCINOMA - Protein relative expression (CPTAC)
Number of samples
330
Samples
Sample ID
Sample type
nRPX
351
Tumor
1.2
367
Tumor
1.2
331
Tumor
1.1
743
Tumor
1.1
671
Tumor
1.0
537
Tumor
1.0
951
Tumor
1.0
285
Tumor
1.0
685
Tumor
1.0
965
Tumor
0.9
227
Tumor
0.9
567
Tumor
0.8
517
Tumor
0.8
817
Tumor
0.8
661
Tumor
0.7
131
Tumor
0.7
967
Tumor
0.7
815
Tumor
0.7
665
Tumor
0.7
724
Normal
0.7
363
Tumor
0.6
385
Tumor
0.6
925
Tumor
0.6
171
Tumor
0.6
413
Tumor
0.6
983
Tumor
0.6
395
Tumor
0.6
267
Tumor
0.6
483
Tumor
0.6
535
Tumor
0.5
635
Tumor
0.5
883
Tumor
0.5
523
Tumor
0.5
471
Tumor
0.5
877
Tumor
0.5
557
Tumor
0.5
1021
Tumor
0.5
715
Tumor
0.4
545
Tumor
0.4
447
Tumor
0.4
123
Tumor
0.4
573
Tumor
0.4
641
Tumor
0.4
127
Tumor
0.4
211
Tumor
0.4
387
Tumor
0.4
873
Tumor
0.4
943
Tumor
0.3
297
Tumor
0.3
493
Tumor
0.3
311
Tumor
0.3
913
Tumor
0.3
813
Tumor
0.3
527
Tumor
0.3
314
Normal
0.3
923
Tumor
0.3
957
Tumor
0.3
1031
Tumor
0.3
851
Tumor
0.3
135
Tumor
0.3
525
Tumor
0.3
427
Tumor
0.3
353
Tumor
0.3
1015
Tumor
0.3
867
Tumor
0.3
814
Normal
0.3
185
Tumor
0.3
881
Tumor
0.3
443
Tumor
0.3
975
Tumor
0.3
467
Tumor
0.2
113
Tumor
0.2
533
Tumor
0.2
785
Tumor
0.2
737
Tumor
0.2
497
Tumor
0.2
391
Tumor
0.2
191
Tumor
0.2
231
Tumor
0.2
615
Tumor
0.2
431
Tumor
0.2
1041
Tumor
0.2
332
Normal
0.2
863
Tumor
0.2
393
Tumor
0.2
727
Tumor
0.2
187
Tumor
0.2
271
Tumor
0.2
911
Tumor
0.2
861
Tumor
0.2
937
Tumor
0.2
977
Tumor
0.1
963
Tumor
0.1
553
Tumor
0.1
491
Tumor
0.1
375
Tumor
0.1
298
Normal
0.1
343
Tumor
0.1
327
Tumor
0.1
1025
Tumor
0.1
357
Tumor
0.1
917
Tumor
0.1
445
Tumor
0.1
741
Tumor
0.1
1013
Tumor
0.1
355
Tumor
0.1
217
Tumor
0.1
223
Tumor
0.1
125
Tumor
0.1
283
Tumor
0.1
487
Tumor
0.1
278
Normal
0.1
473
Tumor
0.1
423
Tumor
0.1
663
Tumor
0.1
112
Tumor
0.1
257
Tumor
0.1
461
Tumor
0.1
697
Tumor
0.1
313
Tumor
0.1
755
Tumor
0.1
435
Tumor
0.0
213
Tumor
0.0
421
Tumor
0.0
312
Normal
0.0
268
Normal
0.0
455
Tumor
0.0
915
Tumor
0.0
425
Tumor
0.0
451
Tumor
0.0
433
Tumor
0.0
1027
Tumor
0.0
953
Tumor
0.0
721
Tumor
0.0
341
Tumor
0.0
823
Tumor
0.0
477
Tumor
0.0
195
Tumor
0.0
258
Normal
0.0
354
Normal
0.0
916
Normal
0.0
221
Tumor
0.0
627
Tumor
0.0
464
Normal
0.0
857
Tumor
0.0
137
Tumor
0.0
513
Tumor
0.0
383
Tumor
0.0
261
Tumor
0.0
538
Normal
-0.1
232
Normal
-0.1
865
Tumor
-0.1
563
Tumor
-0.1
262
Normal
-0.1
145
Tumor
-0.1
465
Tumor
-0.1
745
Tumor
-0.1
352
Normal
-0.1
141
Tumor
-0.1
647
Tumor
-0.1
272
Normal
-0.1
554
Normal
-0.1
1045
Tumor
-0.1
628
Normal
-0.1
636
Normal
-0.1
415
Tumor
-0.1
462
Normal
-0.1
515
Tumor
-0.1
921
Tumor
-0.1
1014
Normal
-0.1
955
Tumor
-0.1
664
Normal
-0.1
617
Tumor
-0.1
922
Normal
-0.1
666
Normal
-0.1
744
Normal
-0.1
277
Tumor
-0.1
161
Tumor
-0.1
222
Normal
-0.1
361
Tumor
-0.1
713
Tumor
-0.1
672
Normal
-0.1
738
Normal
-0.2
571
Tumor
-0.2
777
Tumor
-0.2
862
Normal
-0.2
456
Normal
-0.2
618
Normal
-0.2
918
Normal
-0.2
574
Normal
-0.2
981
Tumor
-0.2
524
Normal
-0.2
534
Normal
-0.2
648
Normal
-0.2
984
Normal
-0.2
746
Normal
-0.2
452
Normal
-0.2
146
Normal
-0.2
568
Normal
-0.2
142
Normal
-0.2
466
Normal
-0.2
388
Normal
-0.2
878
Normal
-0.2
463
Tumor
-0.2
138
Normal
-0.2
1044
Normal
-0.2
394
Normal
-0.2
286
Normal
-0.2
912
Normal
-0.2
444
Normal
-0.2
564
Normal
-0.2
728
Normal
-0.2
616
Normal
-0.2
742
Normal
-0.2
396
Normal
-0.2
228
Normal
-0.2
342
Normal
-0.2
196
Normal
-0.2
218
Normal
-0.2
966
Normal
-0.2
982
Normal
-0.2
536
Normal
-0.2
824
Normal
-0.2
376
Normal
-0.2
284
Normal
-0.2
224
Normal
-0.2
448
Normal
-0.2
365
Tumor
-0.2
392
Normal
-0.2
192
Normal
-0.2
136
Normal
-0.2
786
Normal
-0.2
924
Normal
-0.2
128
Normal
-0.2
662
Normal
-0.2
642
Normal
-0.3
147
Tumor
-0.3
864
Normal
-0.3
698
Normal
-0.3
882
Normal
-0.3
858
Normal
-0.3
695
Tumor
-0.3
328
Normal
-0.3
384
Normal
-0.3
852
Normal
-0.3
572
Normal
-0.3
468
Normal
-0.3
356
Normal
-0.3
968
Normal
-0.3
956
Normal
-0.3
528
Normal
-0.3
952
Normal
-0.3
938
Normal
-0.3
964
Normal
-0.3
1046
Normal
-0.3
472
Normal
-0.3
386
Normal
-0.3
518
Normal
-0.3
214
Normal
-0.3
546
Normal
-0.3
1042
Normal
-0.3
212
Normal
-0.3
1016
Normal
-0.3
926
Normal
-0.3
1028
Normal
-0.3
148
Normal
-0.3
481
Tumor
-0.3
492
Normal
-0.3
124
Normal
-0.3
816
Normal
-0.3
884
Normal
-0.3
344
Normal
-0.3
944
Normal
-0.3
132
Normal
-0.3
188
Normal
-0.3
422
Normal
-0.3
411
Tumor
-0.3
818
Normal
-0.3
474
Normal
-0.3
868
Normal
-0.3
976
Normal
-0.3
358
Normal
-0.3
874
Normal
-0.3
914
Normal
-0.3
866
Normal
-0.3
954
Normal
-0.3
1032
Normal
-0.4
978
Normal
-0.4
756
Normal
-0.4
482
Normal
-0.4
488
Normal
-0.4
723
Tumor
-0.4
958
Normal
-0.4
434
Normal
-0.4
414
Normal
-0.4
696
Normal
-0.4
436
Normal
-0.4
172
Normal
-0.4
428
Normal
-0.4
368
Normal
-0.4
714
Normal
-0.4
446
Normal
-0.4
478
Normal
-0.4
716
Normal
-0.4
558
Normal
-0.4
498
Normal
-0.4
514
Normal
-0.4
412
Normal
-0.4
516
Normal
-0.4
186
Normal
-0.4
1043
Tumor
-0.4
778
Normal
-0.4
494
Normal
-0.4
686
Normal
-0.4
484
Normal
-0.4
426
Normal
-0.4
162
Normal
-0.5
366
Normal
-0.5
111
Normal
-0.5
126
Normal
-0.5
1026
Normal
-0.5
364
Normal
-0.5
424
Normal
-0.5
416
Normal
-0.5
114
Normal
-0.5
722
Normal
-0.5
362
Normal
-0.5
1022
Normal
-0.6
526
Normal
-0.6
432
Normal
-0.6
Show allShow less
LIVER CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
