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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
TTC14 is not prognostic in Liver Hepatocellular Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
4.1
Number of samples
362
Samples
Sample
Description
TPM
TCGA-ED-A97K-01A
0 years, male, asian, stage:Stage IIIA, alive, 6 days
19.9
TCGA-CC-A7IJ-01A
0 years, male, asian, stage:Stage II, alive, 382 days
18.7
TCGA-DD-AA3A-01A
0 years, female, white, stage:Stage I, dead, 410 days
17.5
TCGA-BC-A3KG-01A
0 years, female, white, stage:Stage II, alive, 680 days
17.0
TCGA-ZS-A9CF-01A
0 years, male, white, stage:Stage II, alive, 2412 days
16.5
TCGA-QA-A7B7-01A
0 years, male, black or african american, stage:Stage II, alive, 94 days
12.6
TCGA-ZP-A9D2-01A
0 years, male, white, stage:'--, dead, 765 days
12.3
TCGA-ED-A82E-01A
0 years, female, asian, stage:Stage IIIA, alive, 408 days
12.3
TCGA-DD-AADC-01A
0 years, male, asian, stage:Stage I, dead, 425 days
12.2
TCGA-CC-5261-01A
0 years, male, asian, stage:Stage II, dead, 97 days
12.1
TCGA-BC-A8YO-01A
0 years, female, white, stage:Stage IIIC, alive, 562 days
11.5
TCGA-G3-A7M9-01A
0 years, male, white, stage:Stage IIIB, dead, 56 days
11.2
TCGA-ED-A5KG-01A
0 years, female, asian, stage:Stage II, alive, 854 days
11.1
TCGA-DD-A1EL-01A
0 years, male, black or african american, stage:Stage II, dead, 415 days
10.2
TCGA-G3-A7M6-01A
0 years, female, white, stage:Stage I, alive, 632 days
9.9
TCGA-DD-A1EA-01A
0 years, male, asian, stage:Stage II, alive, 2415 days
9.6
TCGA-DD-A4NA-01A
0 years, female, white, stage:Stage IIIC, alive, 1008 days
9.3
TCGA-DD-A4NJ-01A
0 years, female, white, stage:Stage II, alive, 928 days
8.8
TCGA-DD-A1EC-01A
0 years, female, white, stage:Stage I, alive, 602 days
8.6
TCGA-CC-A8HS-01A
0 years, male, asian, stage:Stage IIIC, dead, 300 days
8.5
TCGA-2Y-A9GX-01A
0 years, male, white, stage:Stage I, alive, 2442 days
8.4
TCGA-BC-A217-01A
0 years, female, white, stage:Stage II, dead, 1397 days
8.4
TCGA-K7-AAU7-01A
0 years, male, white, stage:Stage II, alive, 359 days
8.4
TCGA-WX-AA44-01A
0 years, female, white, stage:Stage I, alive, 615 days
8.3
TCGA-G3-A25U-01A
0 years, female, asian, stage:Stage I, alive, 1636 days
8.2
TCGA-4R-AA8I-01A
0 years, male, white, stage:Stage II, dead, 262 days
8.0
TCGA-DD-A4NE-01A
0 years, female, white, stage:Stage IIIA, dead, 660 days
8.0
TCGA-CC-A1HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 101 days
7.8
TCGA-5R-AA1C-01A
0 years, male, white, stage:Stage II, alive, 520 days
7.6
TCGA-DD-A4ND-01A
0 years, female, white, stage:Stage I, alive, 2746 days
7.6
TCGA-DD-A1EJ-01A
0 years, female, white, stage:Stage IIIC, dead, 1005 days
7.6
TCGA-ED-A66Y-01A
0 years, female, asian, stage:Stage IIIA, dead, 296 days
7.5
TCGA-CC-5260-01A
0 years, female, asian, stage:Stage IIIC, dead, 87 days
7.4
TCGA-DD-AAD1-01A
0 years, female, asian, stage:Stage I, alive, 564 days
7.3
TCGA-DD-AADW-01A
0 years, male, asian, stage:Stage I, alive, 587 days
7.3
TCGA-2Y-A9GS-01A
0 years, male, white, stage:'--, dead, 724 days
7.2
TCGA-DD-A4NH-01A
0 years, female, white, stage:Stage IIIB, alive, 917 days
7.2
TCGA-DD-A4NS-01A
0 years, female, white, stage:Stage I, dead, 2456 days
7.1
TCGA-G3-A25Y-01A
0 years, female, asian, stage:Stage I, dead, 452 days
7.0
TCGA-DD-AAVS-01A
0 years, male, asian, stage:Stage I, alive, 1823 days
6.9
TCGA-2Y-A9GZ-01A
0 years, female, white, stage:Stage II, dead, 848 days
6.9
TCGA-BD-A3EP-01A
0 years, female, black or african american, stage:Stage I, alive, 409 days
6.9
TCGA-UB-A7MB-01A
0 years, male, white, stage:Stage II, alive, 601 days
6.8
TCGA-DD-AACV-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
6.7
TCGA-ED-A7PX-01A
0 years, female, asian, stage:Stage II, alive, 6 days
6.6
TCGA-DD-A3A4-01A
0 years, male, white, stage:Stage IIIA, dead, 612 days
6.5
TCGA-ZP-A9D1-01A
0 years, female, white, stage:'--, alive, 21 days
6.5
TCGA-DD-AACH-01A
0 years, male, asian, stage:Stage II, dead, 195 days
6.4
TCGA-DD-AACK-01A
0 years, male, asian, stage:Stage I, alive, 9 days
6.4
TCGA-CC-A8HV-01A
0 years, female, asian, stage:Stage II, dead, 279 days
6.3
TCGA-2Y-A9H2-01A
0 years, female, white, stage:Stage I, alive, 1731 days
6.3
TCGA-DD-A73C-01A
0 years, female, white, stage:Stage IIIA, alive, 701 days
6.2
TCGA-DD-AADL-01A
0 years, male, asian, stage:Stage I, alive, 636 days
6.2
TCGA-BC-A10U-01A
0 years, male, white, stage:'--, dead, 837 days
6.2
TCGA-WJ-A86L-01A
0 years, female, white, stage:Stage I, alive, 345 days
6.1
TCGA-FV-A4ZQ-01A
0 years, male, white, stage:Stage I, alive, 12 days
6.1
TCGA-CC-A3MB-01A
0 years, male, asian, stage:Stage IIIA, dead, 315 days
6.0
TCGA-G3-AAV4-01A
0 years, female, white, stage:Stage I, dead, 27 days
5.9
TCGA-G3-A5SJ-01A
0 years, male, white, stage:Stage I, alive, 698 days
5.9
TCGA-GJ-A9DB-01A
0 years, male, white, stage:Stage I, dead, 67 days
5.9
TCGA-UB-A7MC-01A
0 years, male, white, stage:Stage IIIA, alive, 500 days
5.8
TCGA-DD-A4NB-01A
0 years, male, white, stage:Stage I, alive, 989 days
5.8
TCGA-2Y-A9GV-01A
0 years, female, white, stage:Stage I, dead, 2532 days
5.7
TCGA-DD-AACW-01A
0 years, male, asian, stage:Stage I, alive, 1424 days
5.7
TCGA-2Y-A9GT-01A
0 years, male, white, stage:Stage I, dead, 1624 days
5.7
TCGA-G3-AAV7-01A
0 years, male, asian, stage:Stage II, alive, 361 days
5.7
TCGA-DD-A4NV-01A
0 years, male, white, stage:Stage IIIA, alive, 2398 days
5.7
TCGA-CC-A8HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 140 days
5.7
TCGA-DD-AACE-01A
0 years, male, asian, stage:Stage I, alive, 2184 days
5.6
TCGA-DD-A4NF-01A
0 years, male, white, stage:Stage I, alive, 942 days
5.6
TCGA-2Y-A9HB-01A
0 years, male, stage:Stage I, alive, 260 days
5.6
TCGA-DD-AAE9-01A
0 years, male, asian, stage:Stage I, alive, 722 days
5.6
TCGA-2Y-A9H6-01A
0 years, female, white, stage:Stage I, alive, 357 days
5.6
TCGA-DD-AAVW-01A
0 years, male, asian, stage:Stage I, alive, 2317 days
5.6
TCGA-BC-A216-01A
0 years, female, white, stage:Stage IIIA, alive, 1351 days
5.6
TCGA-DD-A1EE-01A
0 years, male, white, stage:Stage IIIA, dead, 349 days
5.6
TCGA-DD-AACX-01A
0 years, male, asian, stage:Stage II, alive, 170 days
5.5
TCGA-DD-AAD8-01A
0 years, female, asian, stage:Stage I, alive, 1219 days
5.5
TCGA-DD-A4NQ-01A
0 years, male, white, stage:Stage II, dead, 373 days
5.5
TCGA-CC-A7IK-01A
0 years, male, asian, stage:Stage IIIA, dead, 262 days
5.5
TCGA-DD-AAW0-01A
0 years, male, asian, stage:Stage I, alive, 2015 days
5.4
TCGA-G3-AAV1-01A
0 years, male, asian, stage:Stage IIIC, dead, 359 days
5.4
TCGA-UB-AA0U-01A
0 years, male, white, stage:Stage II, alive, 327 days
5.4
TCGA-DD-AACQ-01A
0 years, male, asian, stage:Stage II, dead, 432 days
5.4
TCGA-CC-A3MA-01A
0 years, male, asian, stage:Stage IIIA, dead, 303 days
5.4
TCGA-EP-A2KC-01A
0 years, male, black or african american, stage:Stage I, dead, 19 days
5.4
TCGA-DD-A1EF-01A
0 years, female, white, stage:Stage I, dead, 394 days
5.4
TCGA-K7-A5RG-01A
0 years, male, black or african american, stage:Stage I, alive, 519 days
5.3
TCGA-KR-A7K0-01A
0 years, male, white, stage:Stage I, dead, 65 days
5.3
TCGA-DD-A4NR-01A
0 years, female, white, stage:Stage I, dead, 9 days
5.3
TCGA-EP-A12J-01A
0 years, male, black or african american, stage:Stage I, alive, 570 days
5.3
TCGA-XR-A8TE-01A
0 years, male, white, stage:Stage IIIA, alive, 925 days
5.3
TCGA-DD-AAD0-01A
0 years, female, asian, stage:Stage I, alive, 137 days
5.3
TCGA-BC-A10Z-01A
0 years, female, white, stage:Stage I, dead, 34 days
5.3
TCGA-YA-A8S7-01A
0 years, male, white, stage:Stage IIIA, dead, 412 days
5.2
TCGA-FV-A3I0-01A
0 years, female, white, stage:Stage II, alive, 848 days
5.2
TCGA-MR-A8JO-01A
0 years, male, white, stage:Stage I, alive, 330 days
5.2
TCGA-DD-A73A-01A
0 years, male, white, stage:Stage I, alive, 728 days
5.2
TCGA-XR-A8TG-01A
0 years, male, white, stage:Stage I, alive, 898 days
5.2
TCGA-DD-A4NK-01A
0 years, female, white, stage:Stage IIIA, dead, 1210 days
5.1
TCGA-DD-AAD5-01A
0 years, male, asian, stage:Stage I, alive, 1345 days
5.1
TCGA-ED-A8O5-01A
0 years, female, asian, stage:Stage IIIA, alive, 406 days
5.1
TCGA-DD-A114-01A
0 years, male, black or african american, stage:Stage II, dead, 1149 days
5.0
TCGA-CC-A3M9-01A
0 years, male, asian, stage:Stage IIIA, dead, 300 days
5.0
TCGA-DD-A73E-01A
0 years, male, white, stage:Stage I, alive, 44 days
4.9
TCGA-BC-A10Y-01A
0 years, male, white, stage:'--, dead, 711 days
4.9
TCGA-EP-A26S-01A
0 years, male, white, stage:Stage I, alive, 608 days
4.8
TCGA-DD-AACU-01A
0 years, male, asian, stage:Stage I, alive, 1567 days
4.8
TCGA-FV-A3R3-01A
0 years, female, white, stage:Stage I, dead, 366 days
4.8
TCGA-DD-AACN-01A
0 years, male, asian, stage:Stage I, alive, 1302 days
4.8
TCGA-XR-A8TF-01A
0 years, male, white, stage:Stage I, dead, 693 days
4.7
TCGA-ED-A7XP-01A
0 years, female, asian, stage:Stage II, alive, 400 days
4.7
TCGA-BC-A10W-01A
0 years, male, asian, stage:'--, dead, 91 days
4.7
TCGA-CC-A5UD-01A
0 years, male, asian, stage:Stage IIIA, dead, 304 days
4.7
TCGA-DD-AACA-01A
0 years, male, asian, stage:Stage I, alive, 2301 days
4.7
TCGA-DD-AAED-01A
0 years, male, asian, stage:Stage I, alive, 763 days
4.6
TCGA-DD-AACZ-01A
0 years, female, asian, stage:Stage I, dead, 171 days
4.6
TCGA-DD-A4NN-01A
0 years, female, white, stage:Stage I, dead, 899 days
4.6
TCGA-FV-A2QR-01A
0 years, male, white, stage:Stage I, dead, 581 days
4.6
TCGA-2Y-A9H5-01A
0 years, female, white, stage:Stage I, dead, 555 days
4.6
TCGA-WQ-A9G7-01A
0 years, female, white, stage:'--, alive, 30 days
4.5
TCGA-GJ-A3OU-01A
0 years, male, white, stage:Stage I, alive, 879 days
4.5
TCGA-ZP-A9D4-01A
0 years, female, white, stage:'--, alive, 395 days
4.5
TCGA-DD-A1EH-01A
0 years, male, white, stage:Stage III, alive, 1495 days
4.5
TCGA-5R-AA1D-01A
0 years, female, white, stage:Stage IIIA, alive, 449 days
4.5
TCGA-MR-A520-01A
0 years, male, white, stage:Stage I, alive, 229 days
4.5
TCGA-DD-A3A5-01A
0 years, female, white, stage:Stage III, dead, 3125 days
4.5
TCGA-CC-5263-01A
0 years, male, asian, stage:Stage IIIA, dead, 129 days
4.5
TCGA-ED-A4XI-01A
0 years, male, asian, stage:Stage II, alive, 819 days
4.4
TCGA-DD-AACS-01A
0 years, male, asian, stage:Stage I, alive, 1804 days
4.4
TCGA-UB-AA0V-01A
0 years, female, white, stage:Stage I, alive, 314 days
4.4
TCGA-ZP-A9CY-01A
0 years, female, white, stage:'--, alive, 782 days
4.4
TCGA-RG-A7D4-01A
0 years, male, black or african american, stage:Stage II, alive, 1098 days
4.4
TCGA-ZP-A9CV-01A
0 years, male, white, stage:'--, dead, 1088 days
4.3
TCGA-PD-A5DF-01A
0 years, female, white, stage:Stage IIIB, dead, 639 days
4.3
TCGA-HP-A5MZ-01A
0 years, male, stage:Stage I, dead, 91 days
4.3
TCGA-FV-A496-01A
0 years, female, white, stage:Stage I, alive, 10 days
4.3
TCGA-G3-AAV3-01A
0 years, female, white, stage:Stage II, alive, 412 days
4.3
TCGA-DD-AAC8-01A
0 years, male, asian, stage:Stage I, dead, 16 days
4.2
TCGA-HP-A5N0-01A
0 years, female, stage:'--, dead, 752 days
4.2
TCGA-NI-A8LF-01A
0 years, male, white, stage:Stage I, alive, 799 days
4.2
TCGA-BC-A10R-01A
0 years, female, white, stage:'--, dead, 308 days
4.2
TCGA-FV-A23B-01A
0 years, female, white, stage:Stage II, dead, 1852 days
4.2
TCGA-2Y-A9H4-01A
0 years, male, black or african american, stage:Stage I, alive, 1452 days
4.2
TCGA-UB-A7MD-01A
0 years, male, black or african american, stage:Stage I, dead, 52 days
4.1
TCGA-UB-A7ME-01A
0 years, male, asian, stage:Stage I, alive, 486 days
4.1
TCGA-RC-A7SH-01A
0 years, male, asian, stage:Stage II, alive, 468 days
4.1
TCGA-CC-A7IE-01A
0 years, male, asian, stage:Stage IIIA, dead, 217 days
4.1
TCGA-CC-A7IH-01A
0 years, male, asian, stage:Stage IIIA, alive, 365 days
4.1
TCGA-FV-A3R2-01A
0 years, male, white, stage:Stage I, dead, 194 days
4.1
TCGA-DD-A39W-01A
0 years, female, white, stage:Stage III, dead, 827 days
4.1
TCGA-ZP-A9CZ-01A
0 years, male, asian, stage:'--, alive, 706 days
4.1
TCGA-DD-AAD3-01A
0 years, male, asian, stage:Stage I, alive, 1295 days
4.1
TCGA-EP-A3RK-01A
0 years, male, white, stage:Stage IIIA, alive, 363 days
4.0
TCGA-ED-A66X-01A
0 years, male, asian, stage:Stage IIIA, alive, 406 days
4.0
TCGA-DD-A11C-01A
0 years, male, white, stage:Stage I, alive, 662 days
4.0
TCGA-XR-A8TD-01A
0 years, female, white, stage:Stage IIIB, alive, 1030 days
4.0
TCGA-CC-A7II-01A
0 years, male, asian, stage:Stage IIIA, alive, 399 days
4.0
TCGA-G3-A3CK-01A
0 years, male, asian, stage:Stage I, alive, 585 days
3.9
TCGA-MI-A75I-01A
0 years, male, black or african american, stage:'--, alive, 630 days
3.9
TCGA-BC-A10Q-01A
0 years, female, white, stage:'--, dead, 1135 days
3.9
TCGA-DD-AAVY-01A
0 years, male, asian, stage:Stage IIIA, alive, 1970 days
3.9
TCGA-UB-A7MA-01A
0 years, female, white, stage:Stage II, alive, 848 days
3.9
TCGA-ED-A627-01A
0 years, male, white, stage:Stage I, alive, 423 days
3.9
TCGA-DD-AAEK-01A
0 years, male, asian, stage:Stage II, alive, 1067 days
3.8
TCGA-5C-A9VG-01A
0 years, male, white, stage:Stage II, alive, 328 days
3.8
TCGA-DD-AADV-01A
0 years, male, asian, stage:Stage I, alive, 574 days
3.8
TCGA-DD-AAE2-01A
0 years, male, asian, stage:Stage I, alive, 638 days
3.8
TCGA-2Y-A9HA-01A
0 years, male, white, stage:Stage II, dead, 36 days
3.8
TCGA-CC-A7IL-01A
0 years, male, asian, stage:Stage IIIA, dead, 278 days
3.7
TCGA-DD-A11B-01A
0 years, male, white, stage:Stage I, dead, 14 days
3.7
TCGA-DD-AAEE-01A
0 years, male, asian, stage:Stage I, alive, 810 days
3.7
TCGA-G3-A25T-01A
0 years, female, white, stage:Stage IIIA, alive, 1553 days
3.7
TCGA-5R-AAAM-01A
0 years, female, white, stage:Stage II, dead, 46 days
3.7
TCGA-FV-A3I1-01A
0 years, female, white, stage:Stage II, dead, 247 days
3.7
TCGA-DD-AAVP-01A
0 years, male, asian, stage:Stage I, alive, 2752 days
3.7
TCGA-G3-A5SL-01A
0 years, male, white, stage:Stage II, alive, 621 days
3.6
TCGA-LG-A6GG-01A
0 years, female, white, stage:Stage II, alive, 387 days
3.6
TCGA-DD-AADB-01A
0 years, male, asian, stage:Stage I, alive, 1242 days
3.6
TCGA-ED-A459-01A
0 years, male, asian, stage:Stage II, alive, 910 days
3.6
TCGA-5C-A9VH-01A
0 years, male, white, stage:Stage I, alive, 322 days
3.6
TCGA-DD-AAVV-01A
0 years, male, asian, stage:Stage II, alive, 2455 days
3.6
TCGA-2Y-A9GU-01A
0 years, female, white, stage:Stage I, alive, 1939 days
3.6
TCGA-BC-A10X-01A
0 years, female, white, stage:Stage IIIA, dead, 770 days
3.6
TCGA-BC-A112-01A
0 years, male, white, stage:'--, dead, 153 days
3.5
TCGA-5C-AAPD-01A
0 years, male, asian, stage:Stage II, alive, 20 days
3.5
TCGA-G3-A7M8-01A
0 years, male, asian, stage:Stage I, alive, 430 days
3.5
TCGA-DD-AADD-01A
0 years, male, asian, stage:Stage I, alive, 1231 days
3.5
TCGA-LG-A9QD-01A
0 years, male, white, stage:Stage IIIA, alive, 366 days
3.5
TCGA-DD-A4NI-01A
0 years, male, white, stage:Stage II, alive, 816 days
3.5
TCGA-ED-A7PY-01A
0 years, female, asian, stage:Stage II, alive, 390 days
3.5
TCGA-RC-A7S9-01A
0 years, female, asian, stage:Stage I, alive, 640 days
3.5
TCGA-DD-AADG-01A
0 years, male, asian, stage:Stage IIIA, alive, 1145 days
3.5
TCGA-DD-AAW3-01A
0 years, male, asian, stage:Stage I, alive, 1633 days
3.4
TCGA-2Y-A9GY-01A
0 years, female, white, stage:Stage II, dead, 757 days
3.4
TCGA-K7-A6G5-01A
0 years, male, white, stage:Stage I, alive, 512 days
3.4
TCGA-DD-A11D-01A
0 years, female, white, stage:Stage I, dead, 1560 days
3.4
TCGA-RC-A6M5-01A
0 years, female, white, stage:Stage IVA, alive, 15 days
3.4
TCGA-G3-A6UC-01A
0 years, male, white, stage:Stage IIIB, alive, 671 days
3.4
TCGA-DD-A4NG-01A
0 years, male, white, stage:Stage IIIA, dead, 802 days
3.4
TCGA-DD-AACF-01A
0 years, male, asian, stage:Stage I, dead, 365 days
3.4
TCGA-G3-A3CI-01A
0 years, male, white, stage:Stage I, alive, 180 days
3.4
TCGA-XR-A8TC-01A
0 years, female, white, stage:Stage I, alive, 1339 days
3.3
TCGA-BD-A3ER-01A
0 years, male, white, stage:Stage II, alive, 1115 days
3.3
TCGA-CC-5264-01A
0 years, male, asian, stage:Stage IIIA, dead, 102 days
3.3
TCGA-WX-AA46-01A
0 years, male, white, stage:Stage II, alive, 756 days
3.3
TCGA-DD-A4NO-01A
0 years, male, white, stage:Stage I, alive, 2245 days
3.3
TCGA-2Y-A9H9-01A
0 years, male, white, stage:Stage I, alive, 697 days
3.3
TCGA-DD-AAE0-01A
0 years, female, asian, stage:Stage IIIA, alive, 555 days
3.2
TCGA-2Y-A9H8-01A
0 years, female, white, stage:'--, dead, 633 days
3.2
TCGA-DD-A3A6-01A
0 years, female, white, stage:Stage II, dead, 3258 days
3.2
TCGA-DD-AADP-01A
0 years, male, asian, stage:Stage I, alive, 458 days
3.2
TCGA-UB-A7MF-01A
0 years, male, white, stage:Stage IIIA, dead, 214 days
3.2
TCGA-DD-AACY-01A
0 years, male, asian, stage:Stage I, alive, 1450 days
3.2
TCGA-RC-A7SK-01A
0 years, male, asian, stage:Stage I, alive, 472 days
3.2
TCGA-CC-A8HU-01A
0 years, female, asian, stage:Stage IIIA, dead, 344 days
3.2
TCGA-CC-A5UE-01A
0 years, male, asian, stage:Stage IIIB, dead, 272 days
3.2
TCGA-DD-A1EB-01A
0 years, female, stage:Stage I, alive, 2017 days
3.2
TCGA-2Y-A9GW-01A
0 years, male, white, stage:Stage I, dead, 1271 days
3.2
TCGA-G3-A5SK-01A
0 years, male, white, stage:Stage I, alive, 744 days
3.2
TCGA-DD-A1ED-01A
0 years, male, white, stage:Stage I, alive, 2301 days
3.1
TCGA-MI-A75E-01A
0 years, male, white, stage:Stage IIIC, alive, 507 days
3.1
TCGA-3K-AAZ8-01A
0 years, male, black or african american, stage:Stage IIIB, alive, 396 days
3.1
TCGA-CC-A7IF-01A
0 years, male, asian, stage:Stage IIIA, dead, 649 days
3.1
TCGA-DD-AADY-01A
0 years, female, asian, stage:Stage I, alive, 555 days
3.1
TCGA-DD-AAD2-01A
0 years, male, asian, stage:Stage I, alive, 658 days
3.0
TCGA-DD-AAE7-01A
0 years, male, asian, stage:Stage I, alive, 644 days
3.0
TCGA-DD-A1EI-01A
0 years, male, asian, stage:Stage I, alive, 183 days
3.0
TCGA-FV-A2QQ-01A
0 years, male, white, stage:Stage I, alive, 729 days
3.0
TCGA-DD-A4NL-01A
0 years, male, white, stage:Stage I, alive, 1711 days
3.0
TCGA-ZS-A9CD-01A
0 years, male, white, stage:Stage II, dead, 1386 days
3.0
TCGA-DD-A113-01A
0 years, female, white, stage:Stage II, alive, 2425 days
3.0
TCGA-CC-A5UC-01A
0 years, male, asian, stage:Stage IIIA, dead, 347 days
3.0
TCGA-ZP-A9D0-01A
0 years, female, black or african american, stage:'--, alive, 1091 days
3.0
TCGA-G3-A25V-01A
0 years, male, white, stage:Stage I, alive, 860 days
3.0
TCGA-DD-AADA-01A
0 years, female, asian, stage:Stage I, alive, 1233 days
2.9
TCGA-DD-AAVR-01A
0 years, male, asian, stage:Stage I, alive, 2513 days
2.9
TCGA-EP-A2KA-01A
0 years, female, white, stage:Stage IIIA, dead, 627 days
2.9
TCGA-BC-A10T-01A
0 years, male, white, stage:'--, dead, 837 days
2.9
TCGA-DD-AAW1-01A
0 years, male, asian, stage:Stage IIIA, alive, 1989 days
2.9
TCGA-2Y-A9H7-01A
0 years, female, white, stage:Stage I, alive, 1168 days
2.9
TCGA-G3-A25S-01A
0 years, male, white, stage:Stage I, dead, 416 days
2.9
TCGA-ZS-A9CG-01A
0 years, male, white, stage:Stage II, alive, 341 days
2.9
TCGA-G3-A3CG-01A
0 years, male, white, stage:Stage I, alive, 673 days
2.9
TCGA-DD-AACL-01A
0 years, female, asian, stage:Stage I, dead, 107 days
2.9
TCGA-T1-A6J8-01A
0 years, male, white, stage:'--, alive, 23 days
2.9
TCGA-RC-A7SB-01A
0 years, male, asian, stage:Stage II, alive, 588 days
2.9
TCGA-DD-A3A8-01A
0 years, male, white, stage:Stage II, dead, 11 days
2.8
TCGA-DD-AAW2-01A
0 years, male, asian, stage:Stage I, alive, 1855 days
2.8
TCGA-CC-A3MC-01A
0 years, male, asian, stage:Stage IIIA, alive, 363 days
2.8
TCGA-DD-A115-01A
0 years, male, white, stage:Stage IIIA, dead, 2542 days
2.8
TCGA-DD-A73D-01A
0 years, female, white, stage:Stage II, alive, 693 days
2.8
TCGA-G3-A5SI-01A
0 years, male, asian, stage:Stage II, dead, 768 days
2.8
TCGA-CC-A9FS-01A
0 years, male, asian, stage:Stage II, alive, 211 days
2.8
TCGA-DD-A4NP-01A
0 years, male, white, stage:Stage I, alive, 3308 days
2.8
TCGA-G3-A5SM-01A
0 years, male, white, stage:Stage II, alive, 520 days
2.8
TCGA-G3-AAV2-01A
0 years, male, white, stage:Stage I, alive, 372 days
2.8
TCGA-DD-A1EG-01A
0 years, male, white, stage:Stage I, dead, 1372 days
2.8
TCGA-DD-A3A2-01A
0 years, female, white, stage:Stage I, dead, 2131 days
2.8
TCGA-NI-A4U2-01A
0 years, male, white, stage:Stage IIIA, dead, 1791 days
2.8
TCGA-DD-AAVZ-01A
0 years, male, asian, stage:Stage I, alive, 1900 days
2.7
TCGA-G3-A3CH-01A
0 years, male, asian, stage:Stage IIIA, alive, 780 days
2.7
TCGA-2Y-A9H0-01A
0 years, male, white, stage:Stage IIIA, alive, 3675 days
2.7
TCGA-DD-AAEH-01A
0 years, male, asian, stage:Stage I, alive, 784 days
2.6
TCGA-RC-A7SF-01A
0 years, male, asian, stage:Stage I, alive, 579 days
2.6
TCGA-DD-AAE1-01A
0 years, male, asian, stage:Stage I, alive, 552 days
2.6
TCGA-DD-AACP-01A
0 years, male, asian, stage:Stage I, alive, 415 days
2.6
TCGA-GJ-A6C0-01A
0 years, female, white, stage:Stage II, dead, 31 days
2.6
TCGA-DD-A73F-01A
0 years, female, white, stage:Stage I, alive, 1085 days
2.6
TCGA-G3-A7M7-01A
0 years, male, white, stage:Stage I, alive, 361 days
2.6
TCGA-WX-AA47-01A
0 years, female, white, stage:Stage IIIA, dead, 556 days
2.5
TCGA-ZS-A9CE-01A
0 years, female, white, stage:Stage II, alive, 1241 days
2.5
TCGA-CC-A9FW-01A
0 years, male, asian, stage:Stage IIIA, alive, 248 days
2.5
TCGA-BW-A5NO-01A
0 years, male, black or african american, stage:Stage IIIA, alive, 20 days
2.5
TCGA-DD-AAEA-01A
0 years, male, asian, stage:Stage I, alive, 575 days
2.5
TCGA-DD-AADU-01A
0 years, male, asian, stage:Stage II, alive, 554 days
2.5
TCGA-BD-A2L6-01A
0 years, male, white, stage:'--, alive, 1363 days
2.5
TCGA-ED-A7PZ-01A
0 years, male, asian, stage:Stage II, alive, 6 days
2.5
TCGA-CC-5258-01A
0 years, male, asian, stage:Stage II, dead, 129 days
2.5
TCGA-ED-A8O6-01A
0 years, female, asian, stage:Stage IIIA, dead, 56 days
2.5
TCGA-ED-A7XO-01A
0 years, male, asian, stage:Stage IIIA, alive, 427 days
2.4
TCGA-K7-A5RF-01A
0 years, male, white, stage:Stage I, alive, 631 days
2.4
TCGA-DD-AACB-01A
0 years, female, asian, stage:Stage I, alive, 2324 days
2.4
TCGA-DD-AACC-01A
0 years, male, asian, stage:Stage I, dead, 1685 days
2.4
TCGA-DD-AAD6-01A
0 years, male, asian, stage:Stage IIIA, alive, 672 days
2.4
TCGA-DD-A118-01A
0 years, female, white, stage:Stage II, alive, 3437 days
2.4
TCGA-MI-A75G-01A
0 years, male, white, stage:Stage II, alive, 698 days
2.3
TCGA-G3-AAV6-01A
0 years, female, white, stage:Stage IIIA, dead, 65 days
2.3
TCGA-DD-AADR-01A
0 years, male, asian, stage:Stage I, alive, 2028 days
2.3
TCGA-DD-AADK-01A
0 years, female, asian, stage:Stage II, alive, 1049 days
2.3
TCGA-O8-A75V-01A
0 years, male, stage:Stage I, alive, 538 days
2.3
TCGA-RC-A6M6-01A
0 years, male, white, stage:Stage II, alive, 9 days
2.3
TCGA-DD-AAE6-01A
0 years, female, asian, stage:Stage I, alive, 141 days
2.3
TCGA-KR-A7K8-01A
0 years, male, stage:Stage I, alive, 906 days
2.3
TCGA-DD-AAEG-01A
0 years, female, asian, stage:Stage I, alive, 719 days
2.3
TCGA-BC-A3KF-01A
0 years, female, white, stage:Stage I, alive, 8 days
2.3
TCGA-DD-AAVQ-01A
0 years, male, asian, stage:Stage I, alive, 2728 days
2.3
TCGA-LG-A9QC-01A
0 years, male, white, stage:Stage I, alive, 425 days
2.2
TCGA-DD-A39Y-01A
0 years, male, asian, stage:Stage I, dead, 171 days
2.2
TCGA-DD-AACT-01A
0 years, female, asian, stage:Stage I, alive, 1562 days
2.2
TCGA-G3-AAV5-01A
0 years, male, white, stage:Stage II, alive, 354 days
2.1
TCGA-G3-A25Z-01A
0 years, male, asian, stage:Stage I, alive, 655 days
2.1
TCGA-EP-A2KB-01A
0 years, female, white, stage:Stage I, dead, 596 days
2.0
TCGA-CC-A7IG-01A
0 years, male, asian, stage:Stage II, dead, 299 days
2.0
TCGA-BC-A110-01A
0 years, female, black or african american, stage:'--, dead, 2116 days
2.0
TCGA-G3-AAV0-01A
0 years, male, asian, stage:Stage I, alive, 476 days
1.9
TCGA-RC-A6M4-01A
0 years, female, white, stage:Stage IIIA, alive, 22 days
1.9
TCGA-DD-AACJ-01A
0 years, male, asian, stage:Stage II, alive, 2102 days
1.9
TCGA-CC-5262-01A
0 years, male, asian, stage:Stage IIIC, dead, 103 days
1.8
TCGA-MI-A75C-01A
0 years, male, white, stage:Stage I, alive, 291 days
1.8
TCGA-MI-A75H-01A
0 years, male, white, stage:'--, alive, 747 days
1.8
TCGA-DD-A3A1-01A
0 years, male, stage:Stage IIIA, dead, 233 days
1.8
TCGA-DD-AADF-01A
0 years, female, asian, stage:Stage I, dead, 115 days
1.8
TCGA-DD-A73B-01A
0 years, female, white, stage:Stage I, dead, 283 days
1.7
TCGA-KR-A7K2-01A
0 years, male, white, stage:Stage I, alive, 829 days
1.7
TCGA-DD-AADI-01A
0 years, female, asian, stage:Stage I, alive, 1085 days
1.7
TCGA-DD-AAVX-01A
0 years, male, asian, stage:Stage II, alive, 1718 days
1.7
TCGA-EP-A3JL-01A
0 years, male, white, stage:Stage I, alive, 303 days
1.7
TCGA-DD-AAE3-01A
0 years, male, asian, stage:Stage I, alive, 566 days
1.6
TCGA-DD-AADQ-01A
0 years, male, asian, stage:Stage II, alive, 436 days
1.5
TCGA-DD-A3A3-01A
0 years, male, asian, stage:Stage I, dead, 535 days
1.5
TCGA-G3-A25X-01A
0 years, male, asian, stage:Stage II, alive, 1779 days
1.4
TCGA-BC-A69I-01A
0 years, male, white, stage:Stage I, alive, 387 days
1.4
TCGA-2Y-A9H3-01A
0 years, male, white, stage:Stage II, alive, 1516 days
1.4
TCGA-BC-A10S-01A
0 years, male, white, stage:'--, dead, 1423 days
1.4
TCGA-DD-A116-01A
0 years, male, asian, stage:Stage IIIA, dead, 1622 days
1.4
TCGA-DD-AAEI-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
1.3
TCGA-DD-A39X-01A
0 years, female, white, stage:Stage I, dead, 1694 days
1.2
TCGA-FV-A495-01A
0 years, female, white, stage:Stage II, alive, 1 days
1.2
TCGA-DD-AACG-01A
0 years, male, asian, stage:Stage II, dead, 469 days
1.2
TCGA-G3-AAUZ-01A
0 years, male, stage:Stage I, alive, 480 days
1.2
TCGA-KR-A7K7-01A
0 years, female, white, stage:Stage II, alive, 951 days
1.2
TCGA-BC-A5W4-01A
0 years, male, white, stage:Stage IIIA, dead, 547 days
1.1
TCGA-DD-A3A9-01A
0 years, female, white, stage:Stage IVB, dead, 931 days
1.1
TCGA-DD-AAC9-01A
0 years, male, asian, stage:Stage I, alive, 347 days
1.1
TCGA-DD-A119-01A
0 years, male, asian, stage:Stage IV, dead, 223 days
1.1
TCGA-DD-AADM-01A
0 years, male, asian, stage:Stage II, dead, 12 days
1.1
TCGA-DD-AAVU-01A
0 years, male, asian, stage:Stage II, alive, 2202 days
1.1
TCGA-DD-AAEB-01A
0 years, male, asian, stage:Stage I, alive, 478 days
1.0
TCGA-DD-AACD-01A
0 years, male, asian, stage:Stage I, dead, 381 days
1.0
TCGA-DD-A1EK-01A
0 years, female, white, stage:Stage IVB, dead, 558 days
0.9
TCGA-G3-A7M5-01A
0 years, male, asian, stage:Stage I, alive, 447 days
0.9
TCGA-DD-AACI-01A
0 years, male, asian, stage:Stage II, alive, 1618 days
0.9
TCGA-DD-A39Z-01A
0 years, female, stage:Stage II, dead, 601 days
0.8
TCGA-WQ-AB4B-01A
0 years, male, white, stage:Stage II, alive, 395 days
0.8
TCGA-DD-AADJ-01A
0 years, female, asian, stage:Stage I, alive, 1066 days
0.8
TCGA-ES-A2HS-01A
0 years, male, white, stage:Stage I, dead, 688 days
0.8
TCGA-DD-AAE4-01A
0 years, female, asian, stage:Stage I, alive, 608 days
0.8
TCGA-2Y-A9H1-01A
0 years, male, white, stage:Stage I, dead, 1229 days
0.7
TCGA-ES-A2HT-01A
0 years, male, black or african american, stage:Stage I, dead, 438 days
0.7
TCGA-DD-A39V-01A
0 years, male, white, stage:Stage II, dead, 643 days
0.6
TCGA-BC-A69H-01A
0 years, male, white, stage:Stage II, alive, 444 days
0.6
TCGA-G3-A3CJ-01A
0 years, male, american indian or alaska native, stage:Stage II, alive, 594 days
0.6
TCGA-DD-AACO-01A
0 years, male, asian, stage:Stage I, alive, 1876 days
0.5
TCGA-DD-A3A7-01A
0 years, male, stage:Stage IIIB, dead, 419 days
0.5
TCGA-DD-AADN-01A
0 years, male, asian, stage:Stage I, alive, 898 days
0.4
TCGA-DD-AADS-01A
0 years, male, asian, stage:Stage I, alive, 474 days
0.3
TCGA-DD-AADO-01A
0 years, male, asian, stage:Stage I, alive, 453 days
0.3
TCGA-CC-5259-01A
0 years, female, asian, stage:Stage IIIC, alive, 250 days
0.3
TCGA-DD-A73G-01A
0 years, female, white, stage:Stage I, alive, 3478 days
0.3
TCGA-CC-A123-01A
0 years, female, asian, stage:Stage IIIA, alive, 219 days
0.2
TCGA-FV-A4ZP-01A
0 years, male, white, stage:Stage IIIA, dead, 2486 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
TTC14 is not prognostic in Liver Hepatocellular Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
12.6
Number of samples
231
Samples
Sample
Description
TPM
DO45189
0 years, female, NA, stage:2, alive, 1200 days
58.2
DO45283
0 years, male, NA, stage:3, alive, 510 days
44.0
DO45297
0 years, female, NA, stage:4, dead, 1260 days
42.6
DO45301
0 years, male, NA, stage:2, dead, 1440 days
42.5
DO45277
0 years, male, NA, stage:3, alive, 600 days
42.0
DO45127
0 years, male, NA, stage:3, dead, 420 days
40.2
DO45287
0 years, male, NA, stage:1, alive, 390 days
36.0
DO45185
0 years, male, NA, stage:2, alive, 600 days
33.1
DO45279
0 years, male, NA, stage:3, alive, 1290 days
29.6
DO45137
0 years, male, NA, stage:1, alive, 1320 days
29.5
DO45251
0 years, female, NA, stage:2, alive, 900 days
28.9
DO45305
0 years, male, NA, stage:4, alive, 300 days
27.3
DO23534
0 years, male, NA, stage:2, alive, 840 days
26.1
DO48721
0 years, female, NA, stage:1, alive, 900 days
24.0
DO48732
0 years, male, NA, stage:3, alive, 630 days
22.9
DO50791
0 years, female, NA, stage:1, dead, 480 days
22.5
DO45249
0 years, male, NA, stage:1, alive, 630 days
21.8
DO45219
0 years, male, NA, stage:2, alive, 1080 days
21.8
DO23526
0 years, male, NA, stage:3, alive, 1050 days
21.7
DO23513
0 years, male, NA, stage:3, alive, 1200 days
21.6
DO48728
0 years, female, NA, stage:2, alive, 150 days
21.2
DO45303
0 years, female, NA, stage:3, alive, 990 days
21.1
DO23514
0 years, male, NA, stage:2, alive, 1290 days
20.7
DO45225
0 years, male, NA, stage:1, alive, 1050 days
20.6
DO48720
0 years, female, NA, stage:2, alive, 570 days
19.8
DO23536
0 years, male, NA, stage:2, alive, 930 days
19.4
DO45205
0 years, female, NA, stage:2, dead, 90 days
19.2
DO23548
0 years, female, NA, stage:1, alive, 840 days
19.0
DO23547
0 years, male, NA, stage:1, alive, 1020 days
19.0
DO45215
0 years, male, NA, stage:2, alive, 1170 days
18.3
DO23512
0 years, male, NA, stage:1, alive, 1260 days
18.1
DO45239
0 years, male, NA, stage:2, alive, 870 days
18.0
DO45203
0 years, female, NA, stage:2, alive, 1170 days
18.0
DO45207
0 years, male, NA, stage:1, alive, 1050 days
17.9
DO45213
0 years, male, NA, stage:1, alive, 1200 days
17.7
DO45227
0 years, female, NA, stage:2, alive, 1020 days
17.4
DO50855
0 years, male, NA, stage:2, alive, 570 days
17.3
DO23549
0 years, male, NA, stage:3, alive, 990 days
17.3
DO23535
0 years, male, NA, stage:1, alive, 960 days
17.1
DO48701
0 years, male, NA, stage:2, alive, 780 days
16.7
DO45211
0 years, male, NA, stage:3, alive, 240 days
16.6
DO23544
0 years, male, NA, stage:2, alive, 960 days
16.6
DO45281
0 years, male, NA, stage:4, alive, 750 days
16.5
DO45245
0 years, female, NA, stage:2, dead, 240 days
16.2
DO50793
0 years, male, NA, stage:4, alive, 540 days
16.1
DO45273
0 years, male, NA, stage:2, alive, 480 days
16.1
DO48712
0 years, male, NA, stage:2, alive, 810 days
15.9
DO45263
0 years, male, NA, stage:3, dead, 270 days
15.8
DO45177
0 years, female, NA, stage:3, alive, 1260 days
15.7
DO45223
0 years, male, NA, stage:4, alive, 1020 days
15.6
DO45243
0 years, female, NA, stage:3, alive, 930 days
15.4
DO23537
0 years, male, NA, stage:2, dead, 900 days
15.2
DO45141
0 years, male, NA, stage:2, alive, 1320 days
15.2
DO48746
0 years, male, NA, stage:3, alive, 570 days
15.0
DO45157
0 years, male, NA, stage:2, alive, 1980 days
14.9
DO50819
0 years, female, NA, stage:2, alive, 510 days
14.5
DO45155
0 years, male, NA, stage:2, alive, 2160 days
14.3
DO45191
0 years, female, NA, stage:2, alive, 1200 days
14.1
DO50800
0 years, male, NA, stage:2, alive, 510 days
14.1
DO45139
0 years, male, NA, stage:3, alive, 1320 days
14.0
DO23523
0 years, male, NA, stage:3, alive, 1080 days
14.0
DO23546
0 years, male, NA, stage:2, alive, 1050 days
13.8
DO45153
0 years, female, NA, stage:2, alive, 1380 days
13.8
DO50844
0 years, male, NA, stage:4, alive, 300 days
13.8
DO50787
0 years, male, NA, stage:3, alive, 480 days
13.7
DO45197
0 years, male, NA, stage:2, alive, 1170 days
13.6
DO48693
0 years, male, NA, stage:2, alive, 900 days
13.5
DO50820
0 years, female, NA, stage:3, alive, 510 days
13.5
DO50802
0 years, male, NA, stage:2, alive, 930 days
13.4
DO23543
0 years, male, NA, stage:2, alive, 1020 days
13.4
DO45257
0 years, male, NA, stage:3, alive, 810 days
13.3
DO45233
0 years, male, NA, stage:3, alive, 900 days
13.3
DO23542
0 years, male, NA, stage:3, alive, 960 days
13.3
DO23509
0 years, male, NA, stage:3, dead, 780 days
13.2
DO45253
0 years, male, NA, stage:2, alive, 870 days
13.1
DO48682
0 years, female, NA, stage:3, dead, 120 days
13.1
DO50803
0 years, female, NA, stage:1, alive, 540 days
13.1
DO45231
0 years, male, NA, stage:2, alive, 930 days
12.9
DO48761
0 years, male, NA, stage:2, alive, 870 days
12.9
DO23510
0 years, female, NA, stage:2, alive, 870 days
12.9
DO50809
0 years, male, NA, stage:3, dead, 720 days
12.8
DO48757
0 years, female, NA, stage:3, alive, 480 days
12.8
DO45091
0 years, male, NA, stage:2, dead, 1320 days
12.8
DO45193
0 years, female, NA, stage:4, dead, 120 days
12.7
DO50859
0 years, male, NA, stage:2, alive, 180 days
12.7
DO45235
0 years, female, NA, stage:1, alive, 900 days
12.7
DO23541
0 years, male, NA, stage:2, alive, 930 days
12.7
DO45111
0 years, male, NA, stage:2, alive, 1590 days
12.6
DO48704
0 years, female, NA, stage:3, alive, 750 days
12.5
DO50815
0 years, male, NA, stage:3, alive, 150 days
12.5
DO45103
0 years, male, NA, stage:3, alive, 450 days
12.4
DO45169
0 years, male, NA, stage:3, alive, 1350 days
12.4
DO50857
0 years, male, NA, stage:2, alive, 210 days
12.3
DO23545
0 years, male, NA, stage:2, dead, 570 days
12.2
DO50804
0 years, male, NA, stage:2, alive, 720 days
12.2
DO23530
0 years, male, NA, stage:4, dead, 180 days
12.1
DO45095
0 years, male, NA, stage:2, alive, 1620 days
12.1
DO48730
0 years, female, NA, stage:2, alive, 630 days
12.1
DO45201
0 years, male, NA, stage:1, alive, 900 days
12.1
DO45181
0 years, female, NA, stage:2, alive, 1200 days
12.1
DO45163
0 years, male, NA, stage:2, alive, 960 days
12.0
DO23531
0 years, female, NA, stage:3, alive, 900 days
11.9
DO50850
0 years, male, NA, stage:3, alive, 720 days
11.8
DO45247
0 years, female, NA, stage:2, alive, 210 days
11.7
DO23551
0 years, male, NA, stage:3, dead, 150 days
11.7
DO45135
0 years, male, NA, stage:1, alive, 1410 days
11.6
DO45143
0 years, male, NA, stage:3, alive, 1290 days
11.6
DO45289
0 years, female, NA, stage:3, alive, 360 days
11.6
DO45187
0 years, female, NA, stage:1, alive, 1260 days
11.6
DO48733
0 years, male, NA, stage:2, alive, 600 days
11.6
DO227643
0 years, male, NA, stage:2, alive, 1260 days
11.5
DO48681
0 years, male, NA, stage:2, alive, 900 days
11.4
DO23524
0 years, female, NA, stage:2, alive, 1050 days
11.4
DO45096
0 years, male, NA, stage:2, dead, 1290 days
11.4
DO50822
0 years, male, NA, stage:2, alive, 510 days
11.3
DO227801
0 years, female, NA, stage:1, alive, 660 days
11.3
DO45221
0 years, female, NA, stage:4, dead, 390 days
11.3
DO45229
0 years, male, NA, stage:1, alive, 990 days
11.2
DO50813
0 years, male, NA, stage:2, alive, 420 days
11.2
DO45133
0 years, male, NA, stage:3, dead, 660 days
11.2
DO23529
0 years, male, NA, stage:4, alive, 930 days
11.2
DO50799
0 years, female, NA, stage:2, alive, 540 days
11.1
DO50840
0 years, male, NA, stage:2, alive, 330 days
11.0
DO45129
0 years, male, NA, stage:3, alive, 1470 days
10.9
DO50807
0 years, male, NA, stage:1, alive, 540 days
10.9
DO50832
0 years, male, NA, stage:3, alive, 90 days
10.8
DO45261
0 years, male, NA, stage:3, alive, 990 days
10.7
DO45159
0 years, male, NA, stage:3, alive, 1470 days
10.6
DO45285
0 years, male, NA, stage:3, alive, 480 days
10.6
DO23550
0 years, male, NA, stage:1, alive, 990 days
10.6
DO50808
0 years, male, NA, stage:2, alive, 570 days
10.5
DO48736
0 years, female, NA, stage:1, alive, 600 days
10.3
DO48717
0 years, male, NA, stage:4, dead, 180 days
10.3
DO45179
0 years, female, NA, stage:2, alive, 600 days
10.3
DO45092
0 years, male, NA, stage:4, dead, 1200 days
10.3
DO23527
0 years, male, NA, stage:1, alive, 1050 days
10.2
DO48700
0 years, female, NA, stage:2, alive, 810 days
10.1
DO45171
0 years, male, NA, stage:3, alive, 600 days
10.1
DO45121
0 years, male, NA, stage:3, alive, 1530 days
10.1
DO45195
0 years, male, NA, stage:1, alive, 390 days
10.0
DO23521
0 years, male, NA, stage:3, alive, 1110 days
9.9
DO45275
0 years, male, NA, stage:3, dead, 10 days
9.9
DO45131
0 years, male, NA, stage:4, dead, 360 days
9.8
DO45267
0 years, male, NA, stage:3, dead, 570 days
9.8
DO50774
0 years, female, NA, stage:2, alive, 720 days
9.8
DO48672
0 years, male, NA, stage:2, alive, 450 days
9.7
DO45165
0 years, male, NA, stage:2, alive, 690 days
9.7
DO48725
0 years, male, NA, stage:1, alive, 780 days
9.6
DO45209
0 years, male, NA, stage:4, alive, 1350 days
9.5
DO45183
0 years, female, NA, stage:2, dead, 570 days
9.5
DO48743
0 years, female, NA, stage:2, alive, 570 days
9.4
DO48737
0 years, male, NA, stage:1, alive, 720 days
9.4
DO50811
0 years, male, NA, stage:1, alive, 450 days
9.4
DO45259
0 years, male, NA, stage:3, alive, 330 days
9.3
DO48719
0 years, male, NA, stage:2, alive, 690 days
9.3
DO23528
0 years, female, NA, stage:2, alive, 1020 days
9.3
DO23538
0 years, male, NA, stage:2, alive, 450 days
9.3
DO48716
0 years, male, NA, stage:2, alive, 720 days
9.1
DO50778
0 years, male, NA, stage:4, alive, 630 days
9.0
DO45094
0 years, male, NA, stage:3, alive, 1650 days
8.9
DO23552
0 years, female, NA, stage:1, alive, 810 days
8.9
DO50789
0 years, female, NA, stage:2, alive, 570 days
8.8
DO45099
0 years, male, NA, stage:3, alive, 1590 days
8.8
DO45113
0 years, male, NA, stage:3, alive, 1560 days
8.7
DO48677
0 years, male, NA, stage:3, alive, 1140 days
8.6
DO50798
0 years, male, NA, stage:3, dead, 30 days
8.6
DO48742
0 years, male, NA, stage:2, alive, 600 days
8.6
DO45123
0 years, female, NA, stage:2, dead, 570 days
8.6
DO23532
0 years, female, NA, stage:1, alive, 960 days
8.4
DO45269
0 years, male, NA, stage:3, alive, 750 days
8.3
DO45307
0 years, female, NA, stage:4, dead, 240 days
8.3
DO45237
0 years, male, NA, stage:2, alive, 900 days
8.3
DO48751
0 years, male, NA, stage:2, dead, 480 days
8.3
DO45299
0 years, female, NA, stage:1, alive, 1440 days
8.3
DO48706
0 years, male, NA, stage:2, alive, 870 days
8.2
DO50818
0 years, male, NA, stage:2, alive, 510 days
8.1
DO48695
0 years, male, NA, stage:2, alive, 720 days
8.1
DO23515
0 years, male, NA, stage:2, alive, 1230 days
8.0
DO50829
0 years, male, NA, stage:3, alive, 570 days
8.0
DO50776
0 years, male, NA, stage:1, alive, 690 days
7.9
DO45161
0 years, male, NA, stage:2, dead, 540 days
7.9
DO45107
0 years, female, NA, stage:2, alive, 1710 days
7.9
DO45265
0 years, male, NA, stage:3, alive, 1020 days
7.8
DO48697
0 years, female, NA, stage:2, dead, 810 days
7.8
DO45199
0 years, female, NA, stage:2, alive, 1350 days
7.8
DO45175
0 years, male, NA, stage:2, alive, 1140 days
7.7
DO45173
0 years, male, NA, stage:3, alive, 1170 days
7.6
DO45167
0 years, male, NA, stage:2, dead, 1440 days
7.6
DO45255
0 years, male, NA, stage:3, alive, 720 days
7.5
DO48759
0 years, male, NA, stage:3, alive, 720 days
7.3
DO23508
0 years, female, NA, stage:2, alive, 390 days
7.3
DO45115
0 years, male, NA, stage:2, alive, 840 days
7.3
DO45117
0 years, female, NA, stage:2, dead, 1110 days
7.2
DO48760
0 years, female, NA, stage:2, alive, 690 days
7.1
DO45125
0 years, male, NA, stage:3, alive, 1680 days
7.0
DO50817
0 years, male, NA, stage:2, alive, 390 days
6.7
DO23519
0 years, male, NA, stage:3, alive, 630 days
6.7
DO50825
0 years, male, NA, stage:2, alive, 390 days
6.6
DO23517
0 years, male, NA, stage:2, alive, 1200 days
6.5
DO50783
0 years, male, NA, stage:3, alive, 480 days
6.5
DO50816
0 years, male, NA, stage:2, alive, 390 days
6.3
DO45109
0 years, male, NA, stage:2, alive, 1590 days
6.3
DO48679
0 years, male, NA, stage:2, alive, 1200 days
5.8
DO48727
0 years, female, NA, stage:2, dead, 390 days
5.7
DO48715
0 years, female, NA, stage:2, dead, 690 days
5.7
DO23516
0 years, male, NA, stage:3, dead, 20 days
5.7
DO45101
0 years, male, NA, stage:2, alive, 1680 days
5.5
DO23540
0 years, male, NA, stage:1, alive, 750 days
5.5
DO50805
0 years, male, NA, stage:2, alive, 690 days
5.5
DO45217
0 years, female, NA, stage:3, dead, 270 days
5.5
DO23539
0 years, male, NA, stage:1, alive, 1110 days
5.4
DO45119
0 years, male, NA, stage:3, dead, 510 days
5.3
DO45145
0 years, male, NA, stage:3, dead, 60 days
5.2
DO48741
0 years, male, NA, stage:3, alive, 240 days
5.2
DO23518
0 years, male, NA, stage:2, alive, 1320 days
4.9
DO48723
0 years, male, NA, stage:1, alive, 600 days
4.9
DO48674
0 years, male, NA, stage:2, alive, 1260 days
4.9
DO45097
0 years, male, NA, stage:3, alive, 1620 days
4.9
DO48747
0 years, male, NA, stage:3, alive, 540 days
4.8
DO45105
0 years, male, NA, stage:1, alive, 1680 days
4.6
DO23533
0 years, male, NA, stage:2, alive, 900 days
4.3
DO50839
0 years, female, NA, stage:3, alive, 330 days
4.2
DO50806
0 years, male, NA, stage:4, alive, 540 days
4.2
DO23525
0 years, male, NA, stage:4, alive, 1050 days
4.0
DO50785
0 years, male, NA, stage:4, dead, 90 days
4.0
DO50845
0 years, male, NA, stage:3, alive, 210 days
3.8
DO45241
0 years, male, NA, stage:1, alive, 1080 days
3.6
DO50814
0 years, male, NA, stage:3, alive, 420 days
3.3
DO45149
0 years, female, NA, stage:2, alive, 1260 days
2.7
DO23511
0 years, female, NA, stage:3, dead, 180 days
2.0
DO45093
0 years, male, NA, stage:2, dead, 720 days
1.6
Show allShow less
LIVER HEPATOCELLULAR CARCINOMA - Protein relative expression (CPTAC)
Number of samples
330
Samples
Sample ID
Sample type
nRPX
271
Tumor
1.0
1013
Tumor
0.9
777
Tumor
0.9
497
Tumor
0.9
647
Tumor
0.8
313
Tumor
0.8
487
Tumor
0.8
665
Tumor
0.7
955
Tumor
0.7
368
Normal
0.7
228
Normal
0.6
394
Normal
0.6
227
Tumor
0.6
411
Tumor
0.6
391
Tumor
0.5
557
Tumor
0.5
413
Tumor
0.5
863
Tumor
0.5
141
Tumor
0.5
384
Normal
0.5
1027
Tumor
0.5
491
Tumor
0.5
375
Tumor
0.5
388
Normal
0.4
262
Normal
0.4
1041
Tumor
0.4
877
Tumor
0.4
743
Tumor
0.4
663
Tumor
0.4
331
Tumor
0.4
423
Tumor
0.4
297
Tumor
0.4
1042
Normal
0.4
311
Tumor
0.4
427
Tumor
0.4
785
Tumor
0.4
478
Normal
0.4
953
Tumor
0.4
283
Tumor
0.4
396
Normal
0.4
123
Tumor
0.3
355
Tumor
0.3
425
Tumor
0.3
376
Normal
0.3
428
Normal
0.3
483
Tumor
0.3
513
Tumor
0.3
535
Tumor
0.3
913
Tumor
0.3
224
Normal
0.3
473
Tumor
0.3
488
Normal
0.3
755
Tumor
0.3
131
Tumor
0.3
435
Tumor
0.3
984
Normal
0.3
366
Normal
0.3
272
Normal
0.3
1014
Normal
0.3
113
Tumor
0.3
697
Tumor
0.3
414
Normal
0.3
467
Tumor
0.3
571
Tumor
0.3
1021
Tumor
0.2
424
Normal
0.2
883
Tumor
0.2
286
Normal
0.2
977
Tumor
0.2
361
Tumor
0.2
142
Normal
0.2
431
Tumor
0.2
978
Normal
0.2
954
Normal
0.2
146
Normal
0.2
392
Normal
0.2
383
Tumor
0.2
433
Tumor
0.2
873
Tumor
0.2
517
Tumor
0.2
447
Tumor
0.2
926
Normal
0.2
981
Tumor
0.2
138
Normal
0.2
944
Normal
0.2
881
Tumor
0.2
685
Tumor
0.2
211
Tumor
0.2
498
Normal
0.2
728
Normal
0.2
814
Normal
0.1
1028
Normal
0.1
925
Tumor
0.1
965
Tumor
0.1
964
Normal
0.1
536
Normal
0.1
951
Tumor
0.1
422
Normal
0.1
465
Tumor
0.1
484
Normal
0.1
386
Normal
0.1
567
Tumor
0.1
492
Normal
0.1
983
Tumor
0.1
671
Tumor
0.1
426
Normal
0.1
958
Normal
0.1
1022
Normal
0.1
727
Tumor
0.1
257
Tumor
0.1
298
Normal
0.1
385
Tumor
0.1
923
Tumor
0.1
563
Tumor
0.1
943
Tumor
0.1
445
Tumor
0.1
514
Normal
0.1
212
Normal
0.1
1016
Normal
0.1
1015
Tumor
0.1
261
Tumor
0.1
865
Tumor
0.1
415
Tumor
0.1
721
Tumor
0.1
393
Tumor
0.1
127
Tumor
0.1
813
Tumor
0.1
914
Normal
0.1
672
Normal
0.1
884
Normal
0.1
471
Tumor
0.1
957
Tumor
0.1
493
Tumor
0.1
967
Tumor
0.1
528
Normal
0.1
395
Tumor
0.0
745
Tumor
0.0
327
Tumor
0.0
715
Tumor
0.0
635
Tumor
0.0
443
Tumor
0.0
132
Normal
0.0
756
Normal
0.0
661
Tumor
0.0
534
Normal
0.0
713
Tumor
0.0
698
Normal
0.0
223
Tumor
0.0
724
Normal
0.0
258
Normal
0.0
574
Normal
0.0
648
Normal
0.0
546
Normal
0.0
1031
Tumor
0.0
686
Normal
0.0
284
Normal
0.0
746
Normal
0.0
451
Tumor
0.0
866
Normal
0.0
362
Normal
0.0
911
Tumor
0.0
664
Normal
0.0
1046
Normal
0.0
938
Normal
0.0
786
Normal
0.0
714
Normal
0.0
472
Normal
0.0
868
Normal
0.0
365
Tumor
0.0
878
Normal
0.0
966
Normal
0.0
924
Normal
0.0
494
Normal
0.0
968
Normal
0.0
112
Tumor
0.0
742
Normal
0.0
917
Tumor
0.0
921
Tumor
0.0
444
Normal
0.0
778
Normal
0.0
145
Tumor
0.0
1045
Tumor
0.0
477
Tumor
0.0
982
Normal
-0.1
573
Tumor
-0.1
268
Normal
-0.1
1032
Normal
-0.1
128
Normal
-0.1
937
Tumor
-0.1
421
Tumor
-0.1
482
Normal
-0.1
882
Normal
-0.1
267
Tumor
-0.1
695
Tumor
-0.1
148
Normal
-0.1
448
Normal
-0.1
364
Normal
-0.1
328
Normal
-0.1
963
Tumor
-0.1
277
Tumor
-0.1
922
Normal
-0.1
572
Normal
-0.1
558
Normal
-0.1
1026
Normal
-0.1
568
Normal
-0.1
186
Normal
-0.1
416
Normal
-0.1
912
Normal
-0.1
722
Normal
-0.1
916
Normal
-0.1
666
Normal
-0.1
446
Normal
-0.1
387
Tumor
-0.1
515
Tumor
-0.1
723
Tumor
-0.1
874
Normal
-0.1
356
Normal
-0.1
172
Normal
-0.1
525
Tumor
-0.1
564
Normal
-0.1
312
Normal
-0.1
976
Normal
-0.1
114
Normal
-0.1
363
Tumor
-0.1
918
Normal
-0.1
436
Normal
-0.1
867
Tumor
-0.1
864
Normal
-0.1
738
Normal
-0.1
716
Normal
-0.1
526
Normal
-0.1
161
Tumor
-0.1
124
Normal
-0.1
162
Normal
-0.1
461
Tumor
-0.1
975
Tumor
-0.2
741
Tumor
-0.2
466
Normal
-0.2
412
Normal
-0.2
615
Tumor
-0.2
126
Normal
-0.2
861
Tumor
-0.2
462
Normal
-0.2
455
Tumor
-0.2
915
Tumor
-0.2
367
Tumor
-0.2
696
Normal
-0.2
463
Tumor
-0.2
956
Normal
-0.2
135
Tumor
-0.2
111
Normal
-0.2
188
Normal
-0.2
1044
Normal
-0.2
952
Normal
-0.2
232
Normal
-0.2
1025
Tumor
-0.2
518
Normal
-0.2
481
Tumor
-0.2
137
Tumor
-0.2
434
Normal
-0.2
662
Normal
-0.2
136
Normal
-0.2
125
Tumor
-0.2
862
Normal
-0.2
464
Normal
-0.3
627
Tumor
-0.3
524
Normal
-0.3
187
Tumor
-0.3
474
Normal
-0.3
642
Normal
-0.3
737
Tumor
-0.3
523
Tumor
-0.3
616
Normal
-0.3
533
Tumor
-0.3
285
Tumor
-0.3
147
Tumor
-0.3
1043
Tumor
-0.4
456
Normal
-0.4
468
Normal
-0.4
432
Normal
-0.4
278
Normal
-0.4
538
Normal
-0.4
171
Tumor
-0.4
744
Normal
-0.4
185
Tumor
-0.4
617
Tumor
-0.4
452
Normal
-0.4
231
Tumor
-0.5
527
Tumor
-0.5
553
Tumor
-0.5
516
Normal
-0.5
618
Normal
-0.6
641
Tumor
-0.6
314
Normal
-0.6
554
Normal
-0.6
332
Normal
-0.6
636
Normal
-0.7
628
Normal
-0.7
545
Tumor
-0.9
537
Tumor
-1.2
351
Tumor
N/A
352
Normal
N/A
353
Tumor
N/A
354
Normal
N/A
357
Tumor
N/A
358
Normal
N/A
815
Tumor
N/A
816
Normal
N/A
817
Tumor
N/A
818
Normal
N/A
823
Tumor
N/A
824
Normal
N/A
851
Tumor
N/A
852
Normal
N/A
857
Tumor
N/A
858
Normal
N/A
191
Tumor
N/A
192
Normal
N/A
195
Tumor
N/A
196
Normal
N/A
213
Tumor
N/A
214
Normal
N/A
217
Tumor
N/A
218
Normal
N/A
341
Tumor
N/A
221
Tumor
N/A
342
Normal
N/A
222
Normal
N/A
343
Tumor
N/A
344
Normal
N/A
Show allShow less
LIVER CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
