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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SLMAP is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
16.0
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
40.6
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
32.8
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
31.5
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
30.7
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
27.7
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
27.6
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
27.6
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
27.2
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
27.1
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
26.4
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
25.8
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
24.4
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
23.8
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
23.4
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
22.8
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
21.9
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
21.4
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
21.4
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
21.2
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
20.9
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
20.8
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
20.7
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
20.5
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
19.9
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
19.2
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
18.1
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
17.6
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
17.1
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
17.0
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
16.1
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
15.8
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
15.7
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
15.3
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
15.2
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
12.5
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
12.3
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
12.2
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
11.9
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
11.7
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
11.5
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
11.1
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
10.9
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
10.6
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
10.2
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
9.7
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
9.7
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
9.1
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
8.2
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
7.9
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
7.8
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
7.8
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
7.7
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
7.4
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
7.3
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
6.9
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
6.8
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
6.5
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
6.4
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
5.6
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
5.6
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
5.5
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
5.1
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
3.3
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SLMAP is validated prognostic, high expression is favorable in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
10.7
Number of samples
521
Samples
Sample
Description
TPM
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
40.1
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
32.8
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
31.7
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
31.0
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
29.8
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
29.8
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
29.7
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
29.0
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
27.9
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
26.1
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
25.9
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
25.8
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
25.7
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
25.2
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
25.1
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
23.8
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
23.6
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
23.5
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
23.4
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
22.7
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
22.6
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
22.5
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
22.5
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
22.3
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
22.2
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
22.0
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
21.7
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
21.5
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
21.5
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
21.4
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
21.3
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
21.3
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
21.3
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
21.2
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
21.2
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
21.1
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
21.1
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
21.0
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
20.8
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
20.1
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
19.9
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
19.9
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
19.9
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
19.5
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
19.3
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
19.2
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
19.2
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
19.2
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
19.2
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
19.1
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
19.1
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
19.1
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
19.1
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
19.0
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
19.0
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
18.9
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
18.9
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
18.7
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
18.6
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
18.3
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
18.3
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
18.2
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
18.2
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
18.2
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
18.2
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
18.2
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
18.1
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
18.1
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
17.8
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
17.8
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
17.7
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
17.7
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
17.6
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
17.5
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
17.3
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
17.3
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
17.2
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
17.1
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
17.1
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
17.0
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
16.9
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
16.8
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
16.7
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
16.6
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
16.5
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
16.3
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
16.2
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
16.2
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
16.2
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
16.2
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
16.1
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
16.0
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
16.0
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
16.0
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
15.9
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
15.9
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
15.8
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
15.8
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
15.8
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
15.8
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
15.7
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
15.7
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
15.7
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
15.7
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
15.7
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
15.7
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
15.6
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
15.6
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
15.5
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
15.5
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
15.5
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
15.4
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
15.3
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
15.2
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
15.2
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
15.1
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
15.0
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
15.0
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
15.0
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
15.0
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
14.9
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
14.9
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
14.9
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
14.8
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
14.8
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
14.8
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
14.7
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
14.6
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
14.6
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
14.6
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
14.4
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
14.4
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
14.3
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
14.3
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
14.3
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
14.3
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
14.3
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
14.2
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
14.2
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
14.1
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
14.1
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
14.1
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
14.0
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
13.9
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
13.8
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
13.8
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
13.8
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
13.7
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
13.7
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
13.6
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
13.6
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
13.6
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
13.5
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
13.5
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
13.4
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
13.4
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
13.3
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
13.3
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
13.3
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
13.3
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
13.3
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
13.2
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
13.2
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
13.1
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
13.0
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
13.0
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
13.0
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
13.0
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
12.9
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
12.9
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
12.9
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
12.9
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
12.9
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
12.9
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
12.9
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
12.8
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
12.8
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
12.8
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
12.7
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
12.6
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
12.6
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
12.6
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
12.5
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
12.4
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
12.4
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
12.4
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
12.4
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
12.4
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
12.4
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
12.4
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
12.3
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
12.3
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
12.3
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
12.3
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
12.3
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
12.2
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
12.2
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
12.1
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
12.1
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
12.1
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
12.1
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
12.0
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
11.9
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
11.8
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
11.8
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
11.8
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
11.8
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
11.7
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
11.7
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
11.6
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
11.6
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
11.5
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
11.5
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
11.4
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
11.4
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
11.4
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
11.4
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
11.4
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
11.4
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
11.3
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
11.2
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
11.2
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
11.2
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
11.1
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
11.0
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
11.0
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
11.0
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
11.0
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
10.9
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
10.9
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
10.9
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
10.9
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
10.8
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
10.8
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
10.7
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
10.7
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
10.7
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
10.7
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
10.6
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
10.6
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
10.4
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
10.4
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
10.4
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
10.4
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
10.3
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
10.3
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
10.3
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
10.2
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
10.2
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
10.1
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
10.1
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
10.1
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
10.1
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
10.0
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
10.0
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
9.9
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
9.9
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
9.8
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
9.8
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
9.8
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
9.7
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
9.7
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
9.6
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
9.6
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
9.5
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
9.5
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
9.5
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
9.4
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
9.4
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
9.4
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
9.3
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
9.3
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
9.2
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
9.2
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
9.2
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
9.2
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
9.2
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
9.2
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
9.2
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
9.2
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
9.1
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
9.1
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
8.9
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
8.9
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
8.9
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
8.9
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
8.9
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
8.8
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
8.8
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
8.8
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
8.8
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
8.8
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
8.8
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
8.7
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
8.7
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
8.7
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
8.7
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
8.5
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
8.5
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
8.5
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
8.4
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
8.4
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
8.4
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
8.4
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
8.3
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
8.3
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
8.3
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
8.3
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
8.2
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
8.2
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
8.2
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
8.2
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
8.2
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
8.2
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
8.1
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
8.1
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
8.0
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
8.0
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
7.9
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
7.8
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
7.8
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
7.7
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
7.7
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
7.7
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
7.7
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
7.6
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
7.6
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
7.6
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
7.5
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
7.5
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
7.5
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
7.5
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
7.4
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
7.4
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
7.4
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
7.4
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
7.3
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
7.3
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
7.3
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
7.3
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
7.2
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
7.2
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
7.2
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
7.2
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
7.2
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
7.1
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
7.1
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
7.1
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
7.0
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
7.0
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
7.0
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
7.0
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
7.0
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
7.0
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
7.0
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
7.0
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
6.9
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
6.9
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
6.9
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
6.9
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
6.8
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
6.8
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
6.7
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
6.7
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
6.7
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
6.7
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
6.7
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
6.6
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
6.6
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
6.6
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
6.6
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
6.5
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
6.5
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
6.5
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
6.4
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
6.3
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
6.3
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
6.3
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
6.3
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
6.3
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
6.3
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
6.1
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
6.1
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
6.1
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
6.0
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
6.0
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
6.0
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
6.0
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
6.0
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
6.0
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
6.0
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
5.9
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
5.9
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
5.8
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
5.8
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
5.7
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
5.7
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
5.7
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
5.7
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
5.7
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
5.6
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
5.6
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
5.6
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
5.6
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
5.6
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
5.6
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
5.6
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
5.5
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
5.5
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
5.5
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
5.5
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
5.5
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
5.4
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
5.4
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
5.2
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
5.2
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
5.2
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
5.2
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
5.1
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
5.1
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
5.1
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
5.1
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
5.1
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
5.1
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
5.1
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
5.1
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
5.0
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
5.0
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
5.0
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
4.9
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
4.8
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
4.8
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
4.8
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
4.7
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
4.7
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
4.7
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
4.7
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
4.7
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
4.6
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
4.6
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
4.5
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
4.5
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
4.4
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
4.3
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
4.3
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
4.2
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
4.2
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
4.2
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
4.1
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
4.0
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
4.0
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
4.0
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
3.9
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
3.9
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
3.9
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
3.9
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
3.8
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
3.8
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
3.8
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
3.8
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
3.7
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
3.6
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
3.6
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
3.5
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
3.5
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
3.5
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
3.5
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
3.5
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
3.5
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
3.4
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
3.4
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
3.3
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
3.3
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
3.3
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
3.2
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
3.1
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
3.1
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
3.1
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
3.1
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
3.0
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
3.0
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
3.0
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
3.0
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
3.0
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
3.0
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
2.9
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
2.9
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
2.8
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
2.8
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
2.8
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
2.7
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
2.6
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
2.6
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
2.6
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
2.6
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
2.5
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
2.5
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
2.5
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
2.4
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
2.4
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
2.4
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
2.2
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
2.2
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
2.1
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
2.1
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
2.0
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
2.0
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
1.9
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
1.8
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
1.8
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
1.7
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
1.6
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
1.6
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
1.6
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
1.5
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
1.4
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
1.2
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
1.2
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
1.1
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
1.1
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SLMAP is validated prognostic, high expression is favorable in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
14.7
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
44.9
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
31.1
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
27.5
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
27.3
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
26.7
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
25.8
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
23.9
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
23.7
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
23.3
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
23.2
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
21.5
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
21.1
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
20.3
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
19.8
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
19.7
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
19.4
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
19.4
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
19.3
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
19.3
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
19.3
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
19.3
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
19.2
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
18.8
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
18.4
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
18.0
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
17.8
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
17.6
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
17.5
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
17.3
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
17.3
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
17.3
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
17.1
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
17.0
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
16.6
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
16.4
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
16.3
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
16.2
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
16.2
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
16.1
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
15.9
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
15.8
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
15.7
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
15.6
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
15.5
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
15.2
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
15.2
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
15.1
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
14.9
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
14.9
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
14.6
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
14.3
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
14.3
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
14.3
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
14.3
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
14.1
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
14.1
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
13.4
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
13.1
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
13.0
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
13.0
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
12.9
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
12.9
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
12.6
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
12.5
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
12.2
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
11.8
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
11.7
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
11.5
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
11.3
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
11.3
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
11.3
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
11.0
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
11.0
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
10.8
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
10.7
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
10.5
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
10.4
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
10.3
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
10.2
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
10.1
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
10.0
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
10.0
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
9.7
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
9.6
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
8.9
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
8.6
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
7.5
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
7.4
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
7.4
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
6.6
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
6.5
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
6.1
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
5.3
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
5.0
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
4.6
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
4.3
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
4.2
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
4.1
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
3.9
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SLMAP is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
14.2
Number of samples
282
Samples
Sample
Description
TPM
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
82.7
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
60.1
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
56.6
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
49.0
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
40.8
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
39.8
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
38.5
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
38.5
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
37.4
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
37.0
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
35.8
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
35.0
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
34.0
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
32.5
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
32.0
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
32.0
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
30.9
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
30.6
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
30.5
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
30.3
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
30.0
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
29.8
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
29.8
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
29.7
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
29.7
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
29.2
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
29.1
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
29.0
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
28.9
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
28.9
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
28.3
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
27.4
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
27.4
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
26.7
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
26.5
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
26.4
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
26.3
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
26.3
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
26.1
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
26.1
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
25.9
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
25.3
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
25.1
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
25.0
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
24.9
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
24.5
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
24.4
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
24.3
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
24.2
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
23.7
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
23.5
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
23.3
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
22.8
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
22.8
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
22.7
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
22.5
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
22.5
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
22.4
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
22.0
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
21.7
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
21.5
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
21.1
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
21.0
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
20.9
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
20.7
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
20.5
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
19.9
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
19.9
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
19.5
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
19.5
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
19.5
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
19.3
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
18.9
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
18.8
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
18.7
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
18.7
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
18.5
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
18.3
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
18.3
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
18.2
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
18.1
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
18.0
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
18.0
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
17.9
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
17.9
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
17.9
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
17.8
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
17.4
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
17.4
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
17.3
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
17.3
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
17.1
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
16.9
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
16.9
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
16.6
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
16.6
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
16.6
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
16.6
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
15.7
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
15.6
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
15.4
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
15.3
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
15.3
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
15.3
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
15.1
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
14.9
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
14.7
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
14.7
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
14.6
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
14.5
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
14.5
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
14.4
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
14.4
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
14.3
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
14.3
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
14.2
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
14.2
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
14.1
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
14.1
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
14.1
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
14.0
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
14.0
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
13.8
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
13.6
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
13.5
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
13.3
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
13.2
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
13.2
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
13.2
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
12.9
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
12.9
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
12.9
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
12.9
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
12.8
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
12.6
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
12.6
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
12.5
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
12.5
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
12.5
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
12.5
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
12.4
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
12.4
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
12.3
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
12.3
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
12.1
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
12.0
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
12.0
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
12.0
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
11.7
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
11.6
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
11.4
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
11.2
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
11.0
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
10.9
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
10.9
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
10.8
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
10.8
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
10.6
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
10.4
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
10.4
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
10.4
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
10.3
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
10.2
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
10.2
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
10.1
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
10.1
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
9.9
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
9.8
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
9.8
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
9.8
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
9.5
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
9.3
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
9.3
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
9.3
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
9.3
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
9.1
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
9.0
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
8.9
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
8.8
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
8.8
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
8.7
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
8.2
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
8.2
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
7.8
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
7.7
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
7.7
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
7.6
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
7.4
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
7.3
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
7.3
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
7.2
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
7.2
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
7.2
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
7.1
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
7.1
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
6.9
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
6.9
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
6.8
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
6.8
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
6.7
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
6.5
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
6.4
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
6.4
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
6.4
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
6.4
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
6.4
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
6.3
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
6.3
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
6.1
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
6.0
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
6.0
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
5.9
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
5.8
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
5.8
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
5.7
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
5.7
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
5.5
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
5.5
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
5.3
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
5.3
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
5.1
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
5.1
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
5.1
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
5.1
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
5.1
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
5.0
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
5.0
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
5.0
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
5.0
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
4.9
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
4.8
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
4.8
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
4.8
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
4.6
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
4.6
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
4.6
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
4.6
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
4.5
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
4.5
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
4.4
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
4.3
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
4.3
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
4.3
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
4.1
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
4.1
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
4.1
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
4.1
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
4.0
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
4.0
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
4.0
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
3.6
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
3.4
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
3.4
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
3.4
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
3.3
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
3.2
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
3.1
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
3.1
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
3.0
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
2.9
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
2.8
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
2.7
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
2.6
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
2.6
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
2.5
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
2.5
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
2.4
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
2.2
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
2.2
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
2.2
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
2.1
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
2.0
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
2.0
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
1.9
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
1.9
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
1.8
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
1.8
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
1.5
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
1.5
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
0.8
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
0.7
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
0.0
Show allShow less
RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0079510001
Normal
0.7
CPT0078660003
Tumor
0.7
CPT0086970003
Normal
0.7
CPT0011410003
Tumor
0.6
CPT0002370001
Normal
0.6
CPT0010120001
Normal
0.6
CPT0086830003
Normal
0.5
CPT0092190003
Normal
0.5
CPT0078800003
Tumor
0.5
CPT0079180003
Tumor
0.4
CPT0078530001
Normal
0.4
CPT0011240003
Tumor
0.4
CPT0088500001
Normal
0.4
CPT0015910003
Tumor
0.4
CPT0025170003
Tumor
0.4
CPT0075560003
Tumor
0.4
CPT0092800003
Normal
0.4
CPT0020130001
Normal
0.4
CPT0088630003
Tumor
0.4
CPT0025290003
Tumor
0.3
CPT0089480003
Normal
0.3
CPT0066480003
Tumor
0.3
CPT0007470001
Normal
0.3
CPT0019160001
Normal
0.3
CPT0001230001
Normal
0.3
CPT0063640001
Normal
0.3
CPT0092310003
Normal
0.3
CPT0078940001
Normal
0.3
CPT0086890003
Normal
0.3
CPT0002270011
Tumor
0.3
CPT0066430001
Normal
0.3
CPT0007870001
Normal
0.3
CPT0006950001
Normal
0.3
CPT0081990003
Tumor
0.3
CPT0013790003
Normal
0.3
CPT0012640003
Normal
0.3
CPT0000890001
Normal
0.3
CPT0088640003
Normal
0.3
CPT0026420001
Normal
0.3
CPT0092740003
Normal
0.3
CPT0023710001
Normal
0.3
CPT0069190001
Normal
0.3
CPT0084590001
Normal
0.2
CPT0001270001
Normal
0.2
CPT0089040001
Normal
0.2
CPT0075570001
Normal
0.2
CPT0000790001
Normal
0.2
CPT0079230003
Tumor
0.2
CPT0088710001
Normal
0.2
CPT0078840001
Normal
0.2
CPT0010170001
Normal
0.2
CPT0001190001
Normal
0.2
CPT0079430001
Normal
0.2
CPT0064400001
Normal
0.2
CPT0069010001
Normal
0.2
CPT0088780001
Normal
0.2
CPT0018250001
Normal
0.2
CPT0077140001
Normal
0.2
CPT0081620001
Normal
0.2
CPT0000660001
Normal
0.2
CPT0006730001
Normal
0.2
CPT0075720003
Tumor
0.2
CPT0077490003
Tumor
0.2
CPT0082010001
Normal
0.2
CPT0063330001
Normal
0.1
CPT0007320003
Tumor
0.1
CPT0025920001
Normal
0.1
CPT0075130003
Tumor
0.1
CPT0088920001
Normal
0.1
CPT0079300001
Normal
0.1
CPT0014350001
Normal
0.1
CPT0020020001
Normal
0.1
CPT0012290003
Normal
0.1
CPT0001550001
Normal
0.1
CPT0012090003
Normal
0.1
CPT0025060001
Normal
0.1
CPT0014130001
Normal
0.1
CPT0077500001
Normal
0.1
CPT0023360001
Normal
0.1
CPT0001350001
Normal
0.1
CPT0006530001
Normal
0.1
CPT0012670003
Tumor
0.1
CPT0001510001
Normal
0.1
CPT0087050003
Normal
0.1
CPT0077320001
Normal
0.1
CPT0065820001
Normal
0.1
CPT0088690003
Tumor
0.1
CPT0078670001
Normal
0.1
CPT0009020003
Normal
0.1
CPT0069000003
Tumor
0.1
CPT0066520001
Normal
0.1
CPT0012570003
Normal
0.1
CPT0012770003
Normal
0.1
CPT0012920003
Normal
0.1
CPT0075170001
Normal
0.1
CPT0079000001
Normal
0.1
CPT0019130003
Tumor
0.1
CPT0065450001
Normal
0.1
CPT0086870003
Tumor
0.0
CPT0088570001
Normal
0.0
CPT0015730003
Tumor
0.0
CPT0025610001
Normal
0.0
CPT0086370003
Normal
0.0
CPT0002350011
Tumor
0.0
CPT0010160003
Tumor
0.0
CPT0017450001
Normal
0.0
CPT0025230003
Tumor
0.0
CPT0020120003
Tumor
0.0
CPT0088970003
Tumor
0.0
CPT0009080003
Normal
0.0
CPT0081600003
Tumor
0.0
CPT0088760003
Tumor
0.0
CPT0014470001
Normal
0.0
CPT0092730003
Tumor
0.0
CPT0092160003
Tumor
0.0
CPT0076350001
Normal
0.0
CPT0063320003
Tumor
0.0
CPT0065870003
Tumor
0.0
CPT0065750003
Tumor
0.0
CPT0085670003
Tumor
-0.1
CPT0014370004
Tumor
-0.1
CPT0065430003
Tumor
-0.1
CPT0000780007
Tumor
-0.1
CPT0092790003
Tumor
-0.1
CPT0088900003
Tumor
-0.1
CPT0021240003
Tumor
-0.1
CPT0079270003
Tumor
-0.1
CPT0081880003
Tumor
-0.1
CPT0079410003
Tumor
-0.1
CPT0089460004
Tumor
-0.1
CPT0086820003
Tumor
-0.1
CPT0079480003
Tumor
-0.1
CPT0087040003
Tumor
-0.1
CPT0092290003
Tumor
-0.1
CPT0088480003
Tumor
-0.1
CPT0025580004
Tumor
-0.2
CPT0017850003
Tumor
-0.2
CPT0024680001
Normal
-0.2
CPT0012370003
Tumor
-0.2
CPT0078510003
Tumor
-0.2
CPT0006900003
Tumor
-0.2
CPT0086360003
Tumor
-0.2
CPT0084560003
Tumor
-0.2
CPT0079380003
Tumor
-0.2
CPT0066470004
Tumor
-0.2
CPT0001500009
Tumor
-0.2
CPT0014450004
Tumor
-0.2
CPT0006630003
Tumor
-0.2
CPT0063630003
Tumor
-0.2
CPT0025880003
Tumor
-0.2
CPT0025110003
Tumor
-0.2
CPT0089020003
Tumor
-0.3
CPT0007860003
Tumor
-0.3
CPT0010110003
Tumor
-0.3
CPT0078930003
Tumor
-0.3
CPT0012280003
Tumor
-0.3
CPT0023690003
Tumor
-0.3
CPT0065690003
Tumor
-0.3
CPT0019990003
Tumor
-0.3
CPT0000640003
Tumor
-0.3
CPT0001220008
Tumor
-0.3
CPT0000870016
Tumor
-0.3
CPT0012080003
Tumor
-0.3
CPT0065810003
Tumor
-0.3
CPT0086030003
Tumor
-0.3
CPT0014160003
Tumor
-0.3
CPT0064370003
Tumor
-0.3
CPT0025350003
Tumor
-0.3
CPT0009060003
Tumor
-0.3
CPT0006440003
Tumor
-0.3
CPT0001260009
Tumor
-0.3
CPT0077310003
Tumor
-0.3
CPT0069160003
Tumor
-0.3
CPT0012900004
Tumor
-0.3
CPT0078830003
Tumor
-0.3
CPT0015810003
Tumor
-0.4
CPT0071150004
Tumor
-0.4
CPT0026410003
Tumor
-0.4
CPT0077110003
Tumor
-0.4
CPT0078990003
Tumor
-0.4
CPT0001180009
Tumor
-0.4
CPT0001540009
Tumor
-0.4
CPT0086950003
Tumor
-0.4
CPT0023350003
Tumor
-0.4
CPT0024670003
Tumor
-0.4
CPT0088550004
Tumor
-0.5
CPT0012180003
Tumor
-0.5
CPT0076330003
Tumor
-0.5
CPT0065930003
Tumor
-0.5
CPT0009000003
Tumor
-0.5
CPT0001340003
Tumor
-0.5
CPT0025050003
Tumor
-0.6
CPT0012550003
Tumor
-0.7
CPT0017410003
Tumor
-0.9
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
