HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:11.2 nTPM
HPA Brain:3.2 nTPM
GTEx:11.2 nTPM
FANTOM5:1.3 Scaled Tags Per Million
Pig:27.2 nTPM
Mouse:29.9 nTPM
Allen mouse:0.5 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA053357
Glial cells Not detected
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 3.2
Sample id Sample description nTPM
Hippocampus
nTPM: 2.6
2621 Female, age 67, right hemisphere 2.8
2148 Female, age 91, left hemisphere 2.7
1911 Female, age 85, right hemisphere 2.5
2529 Female, age 94, left hemisphere 2.5
1898 Male, age 80, left hemisphere 2.4
1855 Male, age 76, left hemisphere 2.3
Dentate gyrus
nTPM: 2.7
1927 Female, age 91, both hemispheres 3.1
2010 Male, age 76, both hemispheres 3.0
2246 Female, age 85, both hemispheres 3.0
2531 Female, age 67, both hemispheres 2.8
2530 Female, age 94, left hemisphere 2.4
2528 Male, age 74, both hemispheres 2.0
Entorhinal gyrus
nTPM: 2.8
1938 Female, age 85, left hemisphere 3.1
2764 Male, age 80, right hemisphere 3.1
2613 Female, age 94, left hemisphere 2.9
2686 Male, age 75, right hemisphere 2.7
1787 Male, age 76, left hemisphere 2.6
2117 Female, age 91, right hemisphere 2.4
Hippocampus, CA1
nTPM: 3.2
2749 Male, age 80, left hemisphere 4.6
2045 Male, age 76, both hemispheres 3.3
1873 Female, age 85, both hemispheres 3.1
2082 Female, age 91, right hemisphere 2.5
2527 Male, age 74, both hemispheres 2.3
Hippocampus, CA2
nTPM: 2.5
1892 Male, age 76, both hemispheres 3.4
1963 Male, age 80, left hemisphere 3.4
2437 Female, age 94, left hemisphere 2.3
2113 Female, age 91, right hemisphere 2.0
2249 Male, age 74, both hemispheres 2.0
1940 Female, age 85, left hemisphere 1.8
Hippocampus, CA3
nTPM: 3.1
2137 Male, age 80, left hemisphere 4.3
2620 Female, age 94, left hemisphere 4.2
1867 Male, age 76, both hemispheres 3.4
1891 Female, age 85, both hemispheres 2.9
2861 Female, age 67, both hemispheres 2.1
2436 Male, age 74, both hemispheres 1.8
Parahippocampal cortex
nTPM: 2.6
1850 Male, age 80, both hemispheres 3.2
1990 Female, age 91, right hemisphere 3.0
2532 Female, age 72, left hemisphere 3.0
2018 Male, age 76, both hemispheres 2.8
2245 Female, age 91, both hemispheres 2.7
1933 Female, age 85, both hemispheres 2.6
2692 Male, age 74, both hemispheres 2.6
2693 Female, age 94, both hemispheres 2.3
2250 Female, age 67, right hemisphere 2.1
2622 Female, age 67, right hemisphere 1.9
Perirhinal gyrus
nTPM: 3.1
1847 Female, age 91, left hemisphere 3.2
2521 Female, age 94, right hemisphere 3.2
1794 Male, age 80, right hemisphere 3.1
1841 Female, age 85, right hemisphere 3.0
2848 Male, age 76, right hemisphere 2.9
Subiculum
nTPM: 2.8
1977 Female, age 85, both hemispheres 3.3
2438 Female, age 94, left hemisphere 3.3
1901 Male, age 80, both hemispheres 3.2
2042 Male, age 76, both hemispheres 2.9
2619 Male, age 74, both hemispheres 2.1
2729 Female, age 91, right hemisphere 1.9

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 11.2
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 11.2
Samples: 197

Max nTPM: 28.0
Min nTPM: 5.7
Std nTPM: 3.5
Median nTPM: 10.4
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 28.0
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 25.1
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 24.5
GTEX-UTHO-0011-R1A-SM-3GIJO 60-69 years, male 23.1
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 22.2
GTEX-17MF6-0011-R1a-SM-72D6O 40-49 years, male 19.7
GTEX-X4EP-0011-R1A-SM-3P624 60-69 years, female 19.3
GTEX-13NZA-0011-R1b-SM-5LUAF 60-69 years, male 18.6
GTEX-13QJC-0011-R1b-SM-5S2UU 60-69 years, female 18.3
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 18.3
GTEX-NPJ8-0011-R1a-SM-33HCB 40-49 years, male 17.8
Show allShow less

HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 1.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 1.3
FF:10153-102I9 76 years, female 1.6
FF:10169-103B7 60 years, female 1.0

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 27.2
Pig sample Sample description nTPM
Subiculum
nTPM: 23.5
Samples: 4

Max nTPM: 28.2
Min nTPM: 21.4
Sample A Female 28.2
Sample B Female 21.4
Sample C Male 21.7
Sample D Male 22.6
Dorsal hippocampus
nTPM: 27.2
Samples: 4

Max nTPM: 34.1
Min nTPM: 20.9
Sample A Female 34.1
Sample B Female 28.6
Sample C Male 25.0
Sample D Male 20.9
Entorhinal cortex
nTPM: 26.2
Samples: 4

Max nTPM: 28.6
Min nTPM: 24.4
Sample A Female 27.2
Sample B Female 28.6
Sample C Male 24.7
Sample D Male 24.4
Ventral hippocampus
nTPM: 23.3
Samples: 4

Max nTPM: 27.7
Min nTPM: 19.0
Sample A Female 25.9
Sample B Female 19.0
Sample C Male 20.4
Sample D Male 27.7

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 29.9
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 29.9
Samples: 4

Max nTPM: 39.4
Min nTPM: 25.7
Sample A Male 26.6
Sample B Male 25.7
Sample C Female 27.7
Sample D Female 39.4
Hippocampal formation
nTPM: 29.4
Samples: 4

Max nTPM: 34.4
Min nTPM: 25.3
Sample A Male 25.3
Sample B Male 32.1
Sample C Female 34.4
Sample D Female 25.6

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 0.5
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.5
68843847 Antisense, RP_050217_02_D04, Mouse strain C57BL/6J (56 days, male) 0.5

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.


contact@proteinatlas.org