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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
FABP1 is not prognostic in Liver Hepatocellular Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
2986.1
Number of samples
362
Samples
Sample
Description
TPM
TCGA-DD-AADO-01A
0 years, male, asian, stage:Stage I, alive, 453 days
22789.2
TCGA-CC-A123-01A
0 years, female, asian, stage:Stage IIIA, alive, 219 days
18613.6
TCGA-CC-A7IE-01A
0 years, male, asian, stage:Stage IIIA, dead, 217 days
17205.5
TCGA-DD-A1EJ-01A
0 years, female, white, stage:Stage IIIC, dead, 1005 days
16518.4
TCGA-CC-A5UC-01A
0 years, male, asian, stage:Stage IIIA, dead, 347 days
15609.2
TCGA-CC-A9FW-01A
0 years, male, asian, stage:Stage IIIA, alive, 248 days
13120.6
TCGA-DD-A3A1-01A
0 years, male, stage:Stage IIIA, dead, 233 days
12604.1
TCGA-2Y-A9H7-01A
0 years, female, white, stage:Stage I, alive, 1168 days
12513.3
TCGA-DD-AACC-01A
0 years, male, asian, stage:Stage I, dead, 1685 days
11656.9
TCGA-ED-A8O6-01A
0 years, female, asian, stage:Stage IIIA, dead, 56 days
10967.4
TCGA-ES-A2HS-01A
0 years, male, white, stage:Stage I, dead, 688 days
10389.5
TCGA-DD-AADS-01A
0 years, male, asian, stage:Stage I, alive, 474 days
10199.0
TCGA-DD-AAE4-01A
0 years, female, asian, stage:Stage I, alive, 608 days
9879.8
TCGA-KR-A7K7-01A
0 years, female, white, stage:Stage II, alive, 951 days
9314.3
TCGA-DD-A4NR-01A
0 years, female, white, stage:Stage I, dead, 9 days
9278.6
TCGA-DD-A39Z-01A
0 years, female, stage:Stage II, dead, 601 days
9253.5
TCGA-DD-AACG-01A
0 years, male, asian, stage:Stage II, dead, 469 days
9115.5
TCGA-FV-A23B-01A
0 years, female, white, stage:Stage II, dead, 1852 days
8946.5
TCGA-K7-A5RF-01A
0 years, male, white, stage:Stage I, alive, 631 days
8890.9
TCGA-FV-A4ZP-01A
0 years, male, white, stage:Stage IIIA, dead, 2486 days
8651.5
TCGA-MI-A75G-01A
0 years, male, white, stage:Stage II, alive, 698 days
8476.6
TCGA-DD-AACK-01A
0 years, male, asian, stage:Stage I, alive, 9 days
8124.6
TCGA-G3-AAV6-01A
0 years, female, white, stage:Stage IIIA, dead, 65 days
7918.6
TCGA-DD-AADJ-01A
0 years, female, asian, stage:Stage I, alive, 1066 days
7887.1
TCGA-DD-A39W-01A
0 years, female, white, stage:Stage III, dead, 827 days
7693.4
TCGA-DD-AADB-01A
0 years, male, asian, stage:Stage I, alive, 1242 days
7592.8
TCGA-DD-AACW-01A
0 years, male, asian, stage:Stage I, alive, 1424 days
7420.7
TCGA-DD-A73B-01A
0 years, female, white, stage:Stage I, dead, 283 days
7218.8
TCGA-DD-AAD6-01A
0 years, male, asian, stage:Stage IIIA, alive, 672 days
7109.0
TCGA-LG-A9QD-01A
0 years, male, white, stage:Stage IIIA, alive, 366 days
6918.6
TCGA-DD-AADR-01A
0 years, male, asian, stage:Stage I, alive, 2028 days
6893.2
TCGA-CC-A9FS-01A
0 years, male, asian, stage:Stage II, alive, 211 days
6862.8
TCGA-DD-AAVW-01A
0 years, male, asian, stage:Stage I, alive, 2317 days
6821.7
TCGA-CC-5259-01A
0 years, female, asian, stage:Stage IIIC, alive, 250 days
6788.9
TCGA-BC-A10S-01A
0 years, male, white, stage:'--, dead, 1423 days
6762.0
TCGA-K7-A6G5-01A
0 years, male, white, stage:Stage I, alive, 512 days
6714.8
TCGA-EP-A2KA-01A
0 years, female, white, stage:Stage IIIA, dead, 627 days
6646.2
TCGA-DD-AACD-01A
0 years, male, asian, stage:Stage I, dead, 381 days
6514.6
TCGA-2Y-A9H1-01A
0 years, male, white, stage:Stage I, dead, 1229 days
6395.2
TCGA-DD-A39Y-01A
0 years, male, asian, stage:Stage I, dead, 171 days
6385.4
TCGA-DD-AACZ-01A
0 years, female, asian, stage:Stage I, dead, 171 days
6306.1
TCGA-DD-AADN-01A
0 years, male, asian, stage:Stage I, alive, 898 days
6264.2
TCGA-EP-A2KB-01A
0 years, female, white, stage:Stage I, dead, 596 days
6252.1
TCGA-DD-A73F-01A
0 years, female, white, stage:Stage I, alive, 1085 days
6251.2
TCGA-G3-A25Z-01A
0 years, male, asian, stage:Stage I, alive, 655 days
6153.1
TCGA-ZP-A9CY-01A
0 years, female, white, stage:'--, alive, 782 days
6092.9
TCGA-DD-AACP-01A
0 years, male, asian, stage:Stage I, alive, 415 days
6031.0
TCGA-ED-A8O5-01A
0 years, female, asian, stage:Stage IIIA, alive, 406 days
5976.8
TCGA-XR-A8TE-01A
0 years, male, white, stage:Stage IIIA, alive, 925 days
5890.5
TCGA-2Y-A9H5-01A
0 years, female, white, stage:Stage I, dead, 555 days
5874.6
TCGA-RC-A7SF-01A
0 years, male, asian, stage:Stage I, alive, 579 days
5808.3
TCGA-DD-AAE2-01A
0 years, male, asian, stage:Stage I, alive, 638 days
5756.5
TCGA-CC-5258-01A
0 years, male, asian, stage:Stage II, dead, 129 days
5705.8
TCGA-DD-AACO-01A
0 years, male, asian, stage:Stage I, alive, 1876 days
5689.6
TCGA-FV-A2QQ-01A
0 years, male, white, stage:Stage I, alive, 729 days
5654.4
TCGA-DD-AAD1-01A
0 years, female, asian, stage:Stage I, alive, 564 days
5551.8
TCGA-DD-AAVZ-01A
0 years, male, asian, stage:Stage I, alive, 1900 days
5537.0
TCGA-CC-A5UE-01A
0 years, male, asian, stage:Stage IIIB, dead, 272 days
5493.3
TCGA-DD-AAEI-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
5470.7
TCGA-DD-AAE3-01A
0 years, male, asian, stage:Stage I, alive, 566 days
5389.9
TCGA-HP-A5MZ-01A
0 years, male, stage:Stage I, dead, 91 days
5365.8
TCGA-DD-AADP-01A
0 years, male, asian, stage:Stage I, alive, 458 days
5326.6
TCGA-UB-AA0V-01A
0 years, female, white, stage:Stage I, alive, 314 days
5317.7
TCGA-DD-AAD2-01A
0 years, male, asian, stage:Stage I, alive, 658 days
5276.5
TCGA-DD-AADK-01A
0 years, female, asian, stage:Stage II, alive, 1049 days
5251.0
TCGA-DD-AAE7-01A
0 years, male, asian, stage:Stage I, alive, 644 days
5249.1
TCGA-HP-A5N0-01A
0 years, female, stage:'--, dead, 752 days
5237.8
TCGA-RG-A7D4-01A
0 years, male, black or african american, stage:Stage II, alive, 1098 days
5086.5
TCGA-5R-AAAM-01A
0 years, female, white, stage:Stage II, dead, 46 days
5018.8
TCGA-GJ-A3OU-01A
0 years, male, white, stage:Stage I, alive, 879 days
5014.2
TCGA-3K-AAZ8-01A
0 years, male, black or african american, stage:Stage IIIB, alive, 396 days
4993.0
TCGA-G3-AAUZ-01A
0 years, male, stage:Stage I, alive, 480 days
4938.5
TCGA-DD-A3A3-01A
0 years, male, asian, stage:Stage I, dead, 535 days
4934.0
TCGA-RC-A6M6-01A
0 years, male, white, stage:Stage II, alive, 9 days
4904.6
TCGA-BC-A3KF-01A
0 years, female, white, stage:Stage I, alive, 8 days
4855.5
TCGA-DD-A4ND-01A
0 years, female, white, stage:Stage I, alive, 2746 days
4810.9
TCGA-BD-A3ER-01A
0 years, male, white, stage:Stage II, alive, 1115 days
4788.2
TCGA-UB-AA0U-01A
0 years, male, white, stage:Stage II, alive, 327 days
4745.5
TCGA-DD-A4NP-01A
0 years, male, white, stage:Stage I, alive, 3308 days
4714.0
TCGA-DD-AAVU-01A
0 years, male, asian, stage:Stage II, alive, 2202 days
4675.4
TCGA-MI-A75E-01A
0 years, male, white, stage:Stage IIIC, alive, 507 days
4618.2
TCGA-DD-A73A-01A
0 years, male, white, stage:Stage I, alive, 728 days
4542.8
TCGA-ES-A2HT-01A
0 years, male, black or african american, stage:Stage I, dead, 438 days
4459.8
TCGA-DD-AAEA-01A
0 years, male, asian, stage:Stage I, alive, 575 days
4451.1
TCGA-O8-A75V-01A
0 years, male, stage:Stage I, alive, 538 days
4403.2
TCGA-G3-A25V-01A
0 years, male, white, stage:Stage I, alive, 860 days
4377.4
TCGA-DD-AAVX-01A
0 years, male, asian, stage:Stage II, alive, 1718 days
4362.9
TCGA-DD-A1EI-01A
0 years, male, asian, stage:Stage I, alive, 183 days
4310.8
TCGA-WX-AA46-01A
0 years, male, white, stage:Stage II, alive, 756 days
4302.8
TCGA-DD-A73G-01A
0 years, female, white, stage:Stage I, alive, 3478 days
4294.7
TCGA-G3-A5SK-01A
0 years, male, white, stage:Stage I, alive, 744 days
4266.2
TCGA-LG-A6GG-01A
0 years, female, white, stage:Stage II, alive, 387 days
4221.6
TCGA-DD-AAW0-01A
0 years, male, asian, stage:Stage I, alive, 2015 days
4156.2
TCGA-ED-A627-01A
0 years, male, white, stage:Stage I, alive, 423 days
4131.3
TCGA-2Y-A9GT-01A
0 years, male, white, stage:Stage I, dead, 1624 days
4129.7
TCGA-2Y-A9H6-01A
0 years, female, white, stage:Stage I, alive, 357 days
4122.7
TCGA-ED-A66Y-01A
0 years, female, asian, stage:Stage IIIA, dead, 296 days
4064.8
TCGA-BD-A2L6-01A
0 years, male, white, stage:'--, alive, 1363 days
4052.3
TCGA-DD-AAEK-01A
0 years, male, asian, stage:Stage II, alive, 1067 days
4026.7
TCGA-2Y-A9H0-01A
0 years, male, white, stage:Stage IIIA, alive, 3675 days
4021.2
TCGA-DD-AAC9-01A
0 years, male, asian, stage:Stage I, alive, 347 days
3941.9
TCGA-BC-A69H-01A
0 years, male, white, stage:Stage II, alive, 444 days
3911.6
TCGA-2Y-A9HB-01A
0 years, male, stage:Stage I, alive, 260 days
3895.3
TCGA-DD-AACV-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
3875.6
TCGA-G3-A5SJ-01A
0 years, male, white, stage:Stage I, alive, 698 days
3867.5
TCGA-ZP-A9CZ-01A
0 years, male, asian, stage:'--, alive, 706 days
3845.1
TCGA-ZS-A9CD-01A
0 years, male, white, stage:Stage II, dead, 1386 days
3829.3
TCGA-2Y-A9GX-01A
0 years, male, white, stage:Stage I, alive, 2442 days
3759.6
TCGA-DD-AAE1-01A
0 years, male, asian, stage:Stage I, alive, 552 days
3738.6
TCGA-DD-A4NI-01A
0 years, male, white, stage:Stage II, alive, 816 days
3717.0
TCGA-ED-A459-01A
0 years, male, asian, stage:Stage II, alive, 910 days
3649.8
TCGA-DD-A4NL-01A
0 years, male, white, stage:Stage I, alive, 1711 days
3634.6
TCGA-WQ-AB4B-01A
0 years, male, white, stage:Stage II, alive, 395 days
3618.8
TCGA-DD-A4NO-01A
0 years, male, white, stage:Stage I, alive, 2245 days
3579.2
TCGA-BC-A5W4-01A
0 years, male, white, stage:Stage IIIA, dead, 547 days
3570.7
TCGA-UB-A7MB-01A
0 years, male, white, stage:Stage II, alive, 601 days
3530.7
TCGA-DD-A11B-01A
0 years, male, white, stage:Stage I, dead, 14 days
3501.3
TCGA-DD-AAD8-01A
0 years, female, asian, stage:Stage I, alive, 1219 days
3493.5
TCGA-2Y-A9H4-01A
0 years, male, black or african american, stage:Stage I, alive, 1452 days
3489.9
TCGA-ED-A7XO-01A
0 years, male, asian, stage:Stage IIIA, alive, 427 days
3487.2
TCGA-G3-A25U-01A
0 years, female, asian, stage:Stage I, alive, 1636 days
3394.8
TCGA-KR-A7K8-01A
0 years, male, stage:Stage I, alive, 906 days
3361.6
TCGA-DD-AAD0-01A
0 years, female, asian, stage:Stage I, alive, 137 days
3307.3
TCGA-DD-A1EF-01A
0 years, female, white, stage:Stage I, dead, 394 days
3286.1
TCGA-CC-5262-01A
0 years, male, asian, stage:Stage IIIC, dead, 103 days
3282.3
TCGA-DD-A1EH-01A
0 years, male, white, stage:Stage III, alive, 1495 days
3277.9
TCGA-ZP-A9D0-01A
0 years, female, black or african american, stage:'--, alive, 1091 days
3156.2
TCGA-G3-A7M8-01A
0 years, male, asian, stage:Stage I, alive, 430 days
3134.2
TCGA-BC-A69I-01A
0 years, male, white, stage:Stage I, alive, 387 days
3124.6
TCGA-BC-A10X-01A
0 years, female, white, stage:Stage IIIA, dead, 770 days
3118.0
TCGA-MI-A75C-01A
0 years, male, white, stage:Stage I, alive, 291 days
3116.5
TCGA-ED-A7PY-01A
0 years, female, asian, stage:Stage II, alive, 390 days
3100.4
TCGA-CC-A3MB-01A
0 years, male, asian, stage:Stage IIIA, dead, 315 days
3061.1
TCGA-ED-A4XI-01A
0 years, male, asian, stage:Stage II, alive, 819 days
2997.0
TCGA-BC-A110-01A
0 years, female, black or african american, stage:'--, dead, 2116 days
2985.2
TCGA-DD-AACN-01A
0 years, male, asian, stage:Stage I, alive, 1302 days
2979.5
TCGA-G3-AAV0-01A
0 years, male, asian, stage:Stage I, alive, 476 days
2966.8
TCGA-DD-AADC-01A
0 years, male, asian, stage:Stage I, dead, 425 days
2957.8
TCGA-FV-A495-01A
0 years, female, white, stage:Stage II, alive, 1 days
2949.0
TCGA-G3-A3CJ-01A
0 years, male, american indian or alaska native, stage:Stage II, alive, 594 days
2938.6
TCGA-G3-A3CH-01A
0 years, male, asian, stage:Stage IIIA, alive, 780 days
2922.5
TCGA-2Y-A9GV-01A
0 years, female, white, stage:Stage I, dead, 2532 days
2893.7
TCGA-FV-A4ZQ-01A
0 years, male, white, stage:Stage I, alive, 12 days
2877.4
TCGA-DD-AADM-01A
0 years, male, asian, stage:Stage II, dead, 12 days
2862.2
TCGA-DD-AADD-01A
0 years, male, asian, stage:Stage I, alive, 1231 days
2861.6
TCGA-CC-A7IL-01A
0 years, male, asian, stage:Stage IIIA, dead, 278 days
2860.8
TCGA-G3-A7M5-01A
0 years, male, asian, stage:Stage I, alive, 447 days
2843.2
TCGA-DD-A3A9-01A
0 years, female, white, stage:Stage IVB, dead, 931 days
2836.6
TCGA-GJ-A6C0-01A
0 years, female, white, stage:Stage II, dead, 31 days
2745.6
TCGA-NI-A8LF-01A
0 years, male, white, stage:Stage I, alive, 799 days
2680.4
TCGA-DD-A4NH-01A
0 years, female, white, stage:Stage IIIB, alive, 917 days
2669.2
TCGA-DD-A1ED-01A
0 years, male, white, stage:Stage I, alive, 2301 days
2629.1
TCGA-EP-A3RK-01A
0 years, male, white, stage:Stage IIIA, alive, 363 days
2586.3
TCGA-DD-AADQ-01A
0 years, male, asian, stage:Stage II, alive, 436 days
2487.7
TCGA-DD-A11D-01A
0 years, female, white, stage:Stage I, dead, 1560 days
2469.5
TCGA-MR-A520-01A
0 years, male, white, stage:Stage I, alive, 229 days
2463.6
TCGA-5C-AAPD-01A
0 years, male, asian, stage:Stage II, alive, 20 days
2457.7
TCGA-DD-A39X-01A
0 years, female, white, stage:Stage I, dead, 1694 days
2441.8
TCGA-2Y-A9GY-01A
0 years, female, white, stage:Stage II, dead, 757 days
2437.9
TCGA-FV-A3R2-01A
0 years, male, white, stage:Stage I, dead, 194 days
2435.3
TCGA-DD-A4NQ-01A
0 years, male, white, stage:Stage II, dead, 373 days
2424.2
TCGA-LG-A9QC-01A
0 years, male, white, stage:Stage I, alive, 425 days
2397.5
TCGA-2Y-A9H8-01A
0 years, female, white, stage:'--, dead, 633 days
2381.9
TCGA-ZP-A9CV-01A
0 years, male, white, stage:'--, dead, 1088 days
2377.0
TCGA-DD-A39V-01A
0 years, male, white, stage:Stage II, dead, 643 days
2372.3
TCGA-CC-A8HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 140 days
2367.5
TCGA-XR-A8TF-01A
0 years, male, white, stage:Stage I, dead, 693 days
2363.3
TCGA-ED-A66X-01A
0 years, male, asian, stage:Stage IIIA, alive, 406 days
2357.8
TCGA-DD-AAVR-01A
0 years, male, asian, stage:Stage I, alive, 2513 days
2350.4
TCGA-G3-A3CG-01A
0 years, male, white, stage:Stage I, alive, 673 days
2331.3
TCGA-DD-AAVS-01A
0 years, male, asian, stage:Stage I, alive, 1823 days
2329.3
TCGA-CC-5264-01A
0 years, male, asian, stage:Stage IIIA, dead, 102 days
2275.6
TCGA-DD-AAW3-01A
0 years, male, asian, stage:Stage I, alive, 1633 days
2272.1
TCGA-DD-A4NE-01A
0 years, female, white, stage:Stage IIIA, dead, 660 days
2254.3
TCGA-DD-A4NJ-01A
0 years, female, white, stage:Stage II, alive, 928 days
2247.5
TCGA-DD-AADF-01A
0 years, female, asian, stage:Stage I, dead, 115 days
2214.8
TCGA-G3-A3CI-01A
0 years, male, white, stage:Stage I, alive, 180 days
2184.8
TCGA-5C-A9VH-01A
0 years, male, white, stage:Stage I, alive, 322 days
2123.2
TCGA-G3-A3CK-01A
0 years, male, asian, stage:Stage I, alive, 585 days
2123.1
TCGA-EP-A3JL-01A
0 years, male, white, stage:Stage I, alive, 303 days
2090.6
TCGA-DD-AACL-01A
0 years, female, asian, stage:Stage I, dead, 107 days
2069.1
TCGA-FV-A3I1-01A
0 years, female, white, stage:Stage II, dead, 247 days
2028.9
TCGA-DD-A4NV-01A
0 years, male, white, stage:Stage IIIA, alive, 2398 days
2028.9
TCGA-ZP-A9D1-01A
0 years, female, white, stage:'--, alive, 21 days
2016.9
TCGA-DD-AAE0-01A
0 years, female, asian, stage:Stage IIIA, alive, 555 days
2003.6
TCGA-DD-AACT-01A
0 years, female, asian, stage:Stage I, alive, 1562 days
1983.1
TCGA-DD-AADL-01A
0 years, male, asian, stage:Stage I, alive, 636 days
1945.0
TCGA-UB-A7MF-01A
0 years, male, white, stage:Stage IIIA, dead, 214 days
1944.6
TCGA-G3-AAV1-01A
0 years, male, asian, stage:Stage IIIC, dead, 359 days
1925.9
TCGA-DD-AADW-01A
0 years, male, asian, stage:Stage I, alive, 587 days
1922.3
TCGA-2Y-A9GW-01A
0 years, male, white, stage:Stage I, dead, 1271 days
1914.6
TCGA-2Y-A9GU-01A
0 years, female, white, stage:Stage I, alive, 1939 days
1910.9
TCGA-2Y-A9GZ-01A
0 years, female, white, stage:Stage II, dead, 848 days
1909.3
TCGA-4R-AA8I-01A
0 years, male, white, stage:Stage II, dead, 262 days
1862.8
TCGA-G3-A5SL-01A
0 years, male, white, stage:Stage II, alive, 621 days
1862.7
TCGA-DD-A3A7-01A
0 years, male, stage:Stage IIIB, dead, 419 days
1852.0
TCGA-ZS-A9CE-01A
0 years, female, white, stage:Stage II, alive, 1241 days
1843.4
TCGA-DD-AADA-01A
0 years, female, asian, stage:Stage I, alive, 1233 days
1785.9
TCGA-DD-A4NK-01A
0 years, female, white, stage:Stage IIIA, dead, 1210 days
1784.4
TCGA-ZS-A9CF-01A
0 years, male, white, stage:Stage II, alive, 2412 days
1772.6
TCGA-BC-A10T-01A
0 years, male, white, stage:'--, dead, 837 days
1762.7
TCGA-XR-A8TC-01A
0 years, female, white, stage:Stage I, alive, 1339 days
1732.8
TCGA-DD-AADI-01A
0 years, female, asian, stage:Stage I, alive, 1085 days
1701.0
TCGA-GJ-A9DB-01A
0 years, male, white, stage:Stage I, dead, 67 days
1683.4
TCGA-DD-A119-01A
0 years, male, asian, stage:Stage IV, dead, 223 days
1653.7
TCGA-G3-AAV5-01A
0 years, male, white, stage:Stage II, alive, 354 days
1629.3
TCGA-BC-A216-01A
0 years, female, white, stage:Stage IIIA, alive, 1351 days
1625.5
TCGA-G3-A7M7-01A
0 years, male, white, stage:Stage I, alive, 361 days
1594.4
TCGA-EP-A2KC-01A
0 years, male, black or african american, stage:Stage I, dead, 19 days
1563.0
TCGA-RC-A7SB-01A
0 years, male, asian, stage:Stage II, alive, 588 days
1559.2
TCGA-DD-AADY-01A
0 years, female, asian, stage:Stage I, alive, 555 days
1534.5
TCGA-PD-A5DF-01A
0 years, female, white, stage:Stage IIIB, dead, 639 days
1522.9
TCGA-DD-A115-01A
0 years, male, white, stage:Stage IIIA, dead, 2542 days
1521.3
TCGA-DD-AAEH-01A
0 years, male, asian, stage:Stage I, alive, 784 days
1487.7
TCGA-DD-AAEB-01A
0 years, male, asian, stage:Stage I, alive, 478 days
1478.7
TCGA-G3-A5SM-01A
0 years, male, white, stage:Stage II, alive, 520 days
1463.6
TCGA-ED-A5KG-01A
0 years, female, asian, stage:Stage II, alive, 854 days
1463.4
TCGA-DD-A1EL-01A
0 years, male, black or african american, stage:Stage II, dead, 415 days
1449.0
TCGA-DD-A1EK-01A
0 years, female, white, stage:Stage IVB, dead, 558 days
1440.4
TCGA-DD-A3A5-01A
0 years, female, white, stage:Stage III, dead, 3125 days
1421.6
TCGA-QA-A7B7-01A
0 years, male, black or african american, stage:Stage II, alive, 94 days
1417.1
TCGA-CC-A7IH-01A
0 years, male, asian, stage:Stage IIIA, alive, 365 days
1411.2
TCGA-BD-A3EP-01A
0 years, female, black or african american, stage:Stage I, alive, 409 days
1407.0
TCGA-BW-A5NO-01A
0 years, male, black or african american, stage:Stage IIIA, alive, 20 days
1406.3
TCGA-DD-AAEE-01A
0 years, male, asian, stage:Stage I, alive, 810 days
1398.1
TCGA-DD-AACJ-01A
0 years, male, asian, stage:Stage II, alive, 2102 days
1363.5
TCGA-BC-A10Z-01A
0 years, female, white, stage:Stage I, dead, 34 days
1346.0
TCGA-DD-A4NG-01A
0 years, male, white, stage:Stage IIIA, dead, 802 days
1335.2
TCGA-BC-A10W-01A
0 years, male, asian, stage:'--, dead, 91 days
1334.1
TCGA-DD-AAD3-01A
0 years, male, asian, stage:Stage I, alive, 1295 days
1331.7
TCGA-BC-A10U-01A
0 years, male, white, stage:'--, dead, 837 days
1294.0
TCGA-DD-A11C-01A
0 years, male, white, stage:Stage I, alive, 662 days
1292.4
TCGA-DD-A1EG-01A
0 years, male, white, stage:Stage I, dead, 1372 days
1290.1
TCGA-DD-AAVQ-01A
0 years, male, asian, stage:Stage I, alive, 2728 days
1283.9
TCGA-FV-A496-01A
0 years, female, white, stage:Stage I, alive, 10 days
1265.3
TCGA-T1-A6J8-01A
0 years, male, white, stage:'--, alive, 23 days
1257.3
TCGA-DD-AACU-01A
0 years, male, asian, stage:Stage I, alive, 1567 days
1238.1
TCGA-DD-AACA-01A
0 years, male, asian, stage:Stage I, alive, 2301 days
1214.3
TCGA-DD-A4NS-01A
0 years, female, white, stage:Stage I, dead, 2456 days
1210.3
TCGA-DD-AACQ-01A
0 years, male, asian, stage:Stage II, dead, 432 days
1209.3
TCGA-DD-AAE6-01A
0 years, female, asian, stage:Stage I, alive, 141 days
1163.3
TCGA-CC-A8HU-01A
0 years, female, asian, stage:Stage IIIA, dead, 344 days
1154.7
TCGA-2Y-A9H3-01A
0 years, male, white, stage:Stage II, alive, 1516 days
1141.5
TCGA-UB-A7ME-01A
0 years, male, asian, stage:Stage I, alive, 486 days
1136.4
TCGA-RC-A6M4-01A
0 years, female, white, stage:Stage IIIA, alive, 22 days
1125.8
TCGA-DD-AACI-01A
0 years, male, asian, stage:Stage II, alive, 1618 days
1111.6
TCGA-DD-AADV-01A
0 years, male, asian, stage:Stage I, alive, 574 days
1107.5
TCGA-G3-A5SI-01A
0 years, male, asian, stage:Stage II, dead, 768 days
1103.2
TCGA-KR-A7K2-01A
0 years, male, white, stage:Stage I, alive, 829 days
1091.3
TCGA-DD-AACF-01A
0 years, male, asian, stage:Stage I, dead, 365 days
1090.6
TCGA-DD-A116-01A
0 years, male, asian, stage:Stage IIIA, dead, 1622 days
1088.5
TCGA-FV-A2QR-01A
0 years, male, white, stage:Stage I, dead, 581 days
1081.0
TCGA-KR-A7K0-01A
0 years, male, white, stage:Stage I, dead, 65 days
1075.5
TCGA-2Y-A9HA-01A
0 years, male, white, stage:Stage II, dead, 36 days
1068.5
TCGA-K7-AAU7-01A
0 years, male, white, stage:Stage II, alive, 359 days
1019.1
TCGA-DD-AACB-01A
0 years, female, asian, stage:Stage I, alive, 2324 days
1015.0
TCGA-CC-A8HS-01A
0 years, male, asian, stage:Stage IIIC, dead, 300 days
1006.2
TCGA-G3-A7M9-01A
0 years, male, white, stage:Stage IIIB, dead, 56 days
1002.2
TCGA-XR-A8TG-01A
0 years, male, white, stage:Stage I, alive, 898 days
1000.4
TCGA-G3-A25Y-01A
0 years, female, asian, stage:Stage I, dead, 452 days
999.8
TCGA-2Y-A9GS-01A
0 years, male, white, stage:'--, dead, 724 days
999.6
TCGA-FV-A3R3-01A
0 years, female, white, stage:Stage I, dead, 366 days
998.8
TCGA-ZS-A9CG-01A
0 years, male, white, stage:Stage II, alive, 341 days
981.6
TCGA-CC-A7IF-01A
0 years, male, asian, stage:Stage IIIA, dead, 649 days
960.9
TCGA-DD-AAED-01A
0 years, male, asian, stage:Stage I, alive, 763 days
910.6
TCGA-DD-A4NN-01A
0 years, female, white, stage:Stage I, dead, 899 days
909.7
TCGA-G3-A7M6-01A
0 years, female, white, stage:Stage I, alive, 632 days
878.6
TCGA-ED-A97K-01A
0 years, male, asian, stage:Stage IIIA, alive, 6 days
869.6
TCGA-2Y-A9H9-01A
0 years, male, white, stage:Stage I, alive, 697 days
869.2
TCGA-BC-A10R-01A
0 years, female, white, stage:'--, dead, 308 days
861.8
TCGA-UB-A7MA-01A
0 years, female, white, stage:Stage II, alive, 848 days
847.3
TCGA-DD-AAVV-01A
0 years, male, asian, stage:Stage II, alive, 2455 days
831.0
TCGA-RC-A7SK-01A
0 years, male, asian, stage:Stage I, alive, 472 days
821.1
TCGA-MI-A75I-01A
0 years, male, black or african american, stage:'--, alive, 630 days
783.8
TCGA-DD-AACX-01A
0 years, male, asian, stage:Stage II, alive, 170 days
783.2
TCGA-RC-A7S9-01A
0 years, female, asian, stage:Stage I, alive, 640 days
760.5
TCGA-K7-A5RG-01A
0 years, male, black or african american, stage:Stage I, alive, 519 days
746.2
TCGA-DD-AACY-01A
0 years, male, asian, stage:Stage I, alive, 1450 days
740.9
TCGA-G3-AAV3-01A
0 years, female, white, stage:Stage II, alive, 412 days
728.2
TCGA-G3-A6UC-01A
0 years, male, white, stage:Stage IIIB, alive, 671 days
725.1
TCGA-CC-A3MC-01A
0 years, male, asian, stage:Stage IIIA, alive, 363 days
645.1
TCGA-DD-A4NB-01A
0 years, male, white, stage:Stage I, alive, 989 days
644.8
TCGA-DD-A1EA-01A
0 years, male, asian, stage:Stage II, alive, 2415 days
636.5
TCGA-DD-A114-01A
0 years, male, black or african american, stage:Stage II, dead, 1149 days
603.3
TCGA-DD-AAE9-01A
0 years, male, asian, stage:Stage I, alive, 722 days
594.8
TCGA-EP-A26S-01A
0 years, male, white, stage:Stage I, alive, 608 days
584.6
TCGA-ZP-A9D4-01A
0 years, female, white, stage:'--, alive, 395 days
571.6
TCGA-DD-A3A8-01A
0 years, male, white, stage:Stage II, dead, 11 days
567.7
TCGA-MI-A75H-01A
0 years, male, white, stage:'--, alive, 747 days
554.8
TCGA-5R-AA1D-01A
0 years, female, white, stage:Stage IIIA, alive, 449 days
548.0
TCGA-G3-A25T-01A
0 years, female, white, stage:Stage IIIA, alive, 1553 days
520.1
TCGA-2Y-A9H2-01A
0 years, female, white, stage:Stage I, alive, 1731 days
515.6
TCGA-XR-A8TD-01A
0 years, female, white, stage:Stage IIIB, alive, 1030 days
511.3
TCGA-BC-A10Y-01A
0 years, male, white, stage:'--, dead, 711 days
511.3
TCGA-G3-A25X-01A
0 years, male, asian, stage:Stage II, alive, 1779 days
487.5
TCGA-G3-A25S-01A
0 years, male, white, stage:Stage I, dead, 416 days
475.1
TCGA-WX-AA44-01A
0 years, female, white, stage:Stage I, alive, 615 days
466.7
TCGA-DD-A73D-01A
0 years, female, white, stage:Stage II, alive, 693 days
466.5
TCGA-WJ-A86L-01A
0 years, female, white, stage:Stage I, alive, 345 days
438.5
TCGA-5C-A9VG-01A
0 years, male, white, stage:Stage II, alive, 328 days
433.0
TCGA-UB-A7MD-01A
0 years, male, black or african american, stage:Stage I, dead, 52 days
421.6
TCGA-RC-A6M5-01A
0 years, female, white, stage:Stage IVA, alive, 15 days
397.2
TCGA-CC-5261-01A
0 years, male, asian, stage:Stage II, dead, 97 days
395.5
TCGA-WQ-A9G7-01A
0 years, female, white, stage:'--, alive, 30 days
385.9
TCGA-DD-AADG-01A
0 years, male, asian, stage:Stage IIIA, alive, 1145 days
375.7
TCGA-DD-AACE-01A
0 years, male, asian, stage:Stage I, alive, 2184 days
345.7
TCGA-EP-A12J-01A
0 years, male, black or african american, stage:Stage I, alive, 570 days
338.3
TCGA-CC-A3MA-01A
0 years, male, asian, stage:Stage IIIA, dead, 303 days
334.8
TCGA-RC-A7SH-01A
0 years, male, asian, stage:Stage II, alive, 468 days
326.8
TCGA-DD-AAW2-01A
0 years, male, asian, stage:Stage I, alive, 1855 days
301.9
TCGA-DD-AADU-01A
0 years, male, asian, stage:Stage II, alive, 554 days
291.9
TCGA-ED-A7PZ-01A
0 years, male, asian, stage:Stage II, alive, 6 days
286.5
TCGA-DD-AAVP-01A
0 years, male, asian, stage:Stage I, alive, 2752 days
285.0
TCGA-G3-AAV7-01A
0 years, male, asian, stage:Stage II, alive, 361 days
270.3
TCGA-BC-A8YO-01A
0 years, female, white, stage:Stage IIIC, alive, 562 days
257.2
TCGA-DD-AACS-01A
0 years, male, asian, stage:Stage I, alive, 1804 days
250.2
TCGA-YA-A8S7-01A
0 years, male, white, stage:Stage IIIA, dead, 412 days
199.6
TCGA-DD-AAEG-01A
0 years, female, asian, stage:Stage I, alive, 719 days
176.6
TCGA-DD-AACH-01A
0 years, male, asian, stage:Stage II, dead, 195 days
169.8
TCGA-DD-A4NF-01A
0 years, male, white, stage:Stage I, alive, 942 days
165.4
TCGA-DD-A1EE-01A
0 years, male, white, stage:Stage IIIA, dead, 349 days
162.4
TCGA-ZP-A9D2-01A
0 years, male, white, stage:'--, dead, 765 days
161.6
TCGA-5R-AA1C-01A
0 years, male, white, stage:Stage II, alive, 520 days
157.6
TCGA-DD-AAC8-01A
0 years, male, asian, stage:Stage I, dead, 16 days
150.9
TCGA-DD-A118-01A
0 years, female, white, stage:Stage II, alive, 3437 days
146.1
TCGA-DD-AAVY-01A
0 years, male, asian, stage:Stage IIIA, alive, 1970 days
139.3
TCGA-ED-A7XP-01A
0 years, female, asian, stage:Stage II, alive, 400 days
137.2
TCGA-CC-A7IK-01A
0 years, male, asian, stage:Stage IIIA, dead, 262 days
134.3
TCGA-DD-A73E-01A
0 years, male, white, stage:Stage I, alive, 44 days
109.2
TCGA-MR-A8JO-01A
0 years, male, white, stage:Stage I, alive, 330 days
107.8
TCGA-BC-A112-01A
0 years, male, white, stage:'--, dead, 153 days
104.7
TCGA-G3-AAV2-01A
0 years, male, white, stage:Stage I, alive, 372 days
102.1
TCGA-CC-A5UD-01A
0 years, male, asian, stage:Stage IIIA, dead, 304 days
95.4
TCGA-DD-AAW1-01A
0 years, male, asian, stage:Stage IIIA, alive, 1989 days
85.1
TCGA-CC-A8HV-01A
0 years, female, asian, stage:Stage II, dead, 279 days
83.1
TCGA-DD-AA3A-01A
0 years, female, white, stage:Stage I, dead, 410 days
68.0
TCGA-CC-A7IG-01A
0 years, male, asian, stage:Stage II, dead, 299 days
60.4
TCGA-CC-5263-01A
0 years, male, asian, stage:Stage IIIA, dead, 129 days
52.0
TCGA-ED-A7PX-01A
0 years, female, asian, stage:Stage II, alive, 6 days
47.2
TCGA-UB-A7MC-01A
0 years, male, white, stage:Stage IIIA, alive, 500 days
33.0
TCGA-BC-A217-01A
0 years, female, white, stage:Stage II, dead, 1397 days
32.0
TCGA-DD-A3A4-01A
0 years, male, white, stage:Stage IIIA, dead, 612 days
27.6
TCGA-DD-AAD5-01A
0 years, male, asian, stage:Stage I, alive, 1345 days
18.1
TCGA-BC-A3KG-01A
0 years, female, white, stage:Stage II, alive, 680 days
17.8
TCGA-WX-AA47-01A
0 years, female, white, stage:Stage IIIA, dead, 556 days
16.1
TCGA-BC-A10Q-01A
0 years, female, white, stage:'--, dead, 1135 days
12.1
TCGA-DD-A3A2-01A
0 years, female, white, stage:Stage I, dead, 2131 days
11.9
TCGA-FV-A3I0-01A
0 years, female, white, stage:Stage II, alive, 848 days
9.7
TCGA-CC-5260-01A
0 years, female, asian, stage:Stage IIIC, dead, 87 days
8.5
TCGA-CC-A1HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 101 days
6.6
TCGA-NI-A4U2-01A
0 years, male, white, stage:Stage IIIA, dead, 1791 days
6.1
TCGA-DD-A113-01A
0 years, female, white, stage:Stage II, alive, 2425 days
5.4
TCGA-G3-AAV4-01A
0 years, female, white, stage:Stage I, dead, 27 days
3.8
TCGA-DD-A3A6-01A
0 years, female, white, stage:Stage II, dead, 3258 days
3.2
TCGA-CC-A7II-01A
0 years, male, asian, stage:Stage IIIA, alive, 399 days
3.0
TCGA-DD-A4NA-01A
0 years, female, white, stage:Stage IIIC, alive, 1008 days
2.1
TCGA-ED-A82E-01A
0 years, female, asian, stage:Stage IIIA, alive, 408 days
1.3
TCGA-DD-A73C-01A
0 years, female, white, stage:Stage IIIA, alive, 701 days
1.3
TCGA-DD-A1EC-01A
0 years, female, white, stage:Stage I, alive, 602 days
1.2
TCGA-CC-A3M9-01A
0 years, male, asian, stage:Stage IIIA, dead, 300 days
1.1
TCGA-CC-A7IJ-01A
0 years, male, asian, stage:Stage II, alive, 382 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
FABP1 is not prognostic in Liver Hepatocellular Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
2131.6
Number of samples
231
Samples
Sample
Description
TPM
DO50806
0 years, male, NA, stage:4, alive, 540 days
8591.3
DO45161
0 years, male, NA, stage:2, dead, 540 days
8135.1
DO45199
0 years, female, NA, stage:2, alive, 1350 days
7954.9
DO23551
0 years, male, NA, stage:3, dead, 150 days
7230.1
DO45105
0 years, male, NA, stage:1, alive, 1680 days
6897.9
DO45201
0 years, male, NA, stage:1, alive, 900 days
6686.4
DO45265
0 years, male, NA, stage:3, alive, 1020 days
6588.8
DO45107
0 years, female, NA, stage:2, alive, 1710 days
6546.0
DO45109
0 years, male, NA, stage:2, alive, 1590 days
6453.7
DO48715
0 years, female, NA, stage:2, dead, 690 days
6431.2
DO48727
0 years, female, NA, stage:2, dead, 390 days
6410.7
DO23552
0 years, female, NA, stage:1, alive, 810 days
6301.9
DO45183
0 years, female, NA, stage:2, dead, 570 days
6148.8
DO45191
0 years, female, NA, stage:2, alive, 1200 days
6124.9
DO48674
0 years, male, NA, stage:2, alive, 1260 days
5872.7
DO23517
0 years, male, NA, stage:2, alive, 1200 days
5841.3
DO23545
0 years, male, NA, stage:2, dead, 570 days
5752.5
DO50785
0 years, male, NA, stage:4, dead, 90 days
5696.0
DO45173
0 years, male, NA, stage:3, alive, 1170 days
5557.4
DO50789
0 years, female, NA, stage:2, alive, 570 days
5436.9
DO50793
0 years, male, NA, stage:4, alive, 540 days
5381.5
DO50855
0 years, male, NA, stage:2, alive, 570 days
5220.9
DO227801
0 years, female, NA, stage:1, alive, 660 days
5217.4
DO45221
0 years, female, NA, stage:4, dead, 390 days
5202.8
DO45091
0 years, male, NA, stage:2, dead, 1320 days
5108.6
DO50820
0 years, female, NA, stage:3, alive, 510 days
5025.8
DO45223
0 years, male, NA, stage:4, alive, 1020 days
4994.2
DO50819
0 years, female, NA, stage:2, alive, 510 days
4989.8
DO45135
0 years, male, NA, stage:1, alive, 1410 days
4870.3
DO45239
0 years, male, NA, stage:2, alive, 870 days
4817.8
DO45115
0 years, male, NA, stage:2, alive, 840 days
4766.3
DO45181
0 years, female, NA, stage:2, alive, 1200 days
4705.9
DO23508
0 years, female, NA, stage:2, alive, 390 days
4658.1
DO48700
0 years, female, NA, stage:2, alive, 810 days
4563.2
DO48761
0 years, male, NA, stage:2, alive, 870 days
4520.1
DO48737
0 years, male, NA, stage:1, alive, 720 days
4476.0
DO48716
0 years, male, NA, stage:2, alive, 720 days
4391.4
DO45215
0 years, male, NA, stage:2, alive, 1170 days
4237.3
DO48759
0 years, male, NA, stage:3, alive, 720 days
4195.0
DO45187
0 years, female, NA, stage:1, alive, 1260 days
4155.8
DO48760
0 years, female, NA, stage:2, alive, 690 days
4092.1
DO48725
0 years, male, NA, stage:1, alive, 780 days
4028.6
DO23544
0 years, male, NA, stage:2, alive, 960 days
4018.9
DO45096
0 years, male, NA, stage:2, dead, 1290 days
3957.9
DO48730
0 years, female, NA, stage:2, alive, 630 days
3937.5
DO50803
0 years, female, NA, stage:1, alive, 540 days
3834.7
DO23550
0 years, male, NA, stage:1, alive, 990 days
3830.1
DO48741
0 years, male, NA, stage:3, alive, 240 days
3801.5
DO45111
0 years, male, NA, stage:2, alive, 1590 days
3735.2
DO45101
0 years, male, NA, stage:2, alive, 1680 days
3719.0
DO45179
0 years, female, NA, stage:2, alive, 600 days
3703.2
DO45195
0 years, male, NA, stage:1, alive, 390 days
3694.0
DO45269
0 years, male, NA, stage:3, alive, 750 days
3685.8
DO227643
0 years, male, NA, stage:2, alive, 1260 days
3533.6
DO45233
0 years, male, NA, stage:3, alive, 900 days
3434.8
DO48743
0 years, female, NA, stage:2, alive, 570 days
3405.8
DO45094
0 years, male, NA, stage:3, alive, 1650 days
3396.9
DO45119
0 years, male, NA, stage:3, dead, 510 days
3347.4
DO23531
0 years, female, NA, stage:3, alive, 900 days
3267.9
DO23535
0 years, male, NA, stage:1, alive, 960 days
3194.2
DO45167
0 years, male, NA, stage:2, dead, 1440 days
3130.7
DO45255
0 years, male, NA, stage:3, alive, 720 days
3084.9
DO45229
0 years, male, NA, stage:1, alive, 990 days
3076.4
DO50813
0 years, male, NA, stage:2, alive, 420 days
3023.8
DO45127
0 years, male, NA, stage:3, dead, 420 days
3011.8
DO23510
0 years, female, NA, stage:2, alive, 870 days
2983.3
DO48751
0 years, male, NA, stage:2, dead, 480 days
2969.3
DO48728
0 years, female, NA, stage:2, alive, 150 days
2931.6
DO50774
0 years, female, NA, stage:2, alive, 720 days
2918.4
DO45261
0 years, male, NA, stage:3, alive, 990 days
2897.0
DO45219
0 years, male, NA, stage:2, alive, 1080 days
2888.0
DO45247
0 years, female, NA, stage:2, alive, 210 days
2792.1
DO23538
0 years, male, NA, stage:2, alive, 450 days
2781.5
DO45143
0 years, male, NA, stage:3, alive, 1290 days
2764.2
DO50805
0 years, male, NA, stage:2, alive, 690 days
2658.3
DO50845
0 years, male, NA, stage:3, alive, 210 days
2605.7
DO48742
0 years, male, NA, stage:2, alive, 600 days
2605.6
DO50776
0 years, male, NA, stage:1, alive, 690 days
2583.9
DO45213
0 years, male, NA, stage:1, alive, 1200 days
2567.5
DO48712
0 years, male, NA, stage:2, alive, 810 days
2470.4
DO45153
0 years, female, NA, stage:2, alive, 1380 days
2386.9
DO23525
0 years, male, NA, stage:4, alive, 1050 days
2355.6
DO45125
0 years, male, NA, stage:3, alive, 1680 days
2352.9
DO45257
0 years, male, NA, stage:3, alive, 810 days
2352.3
DO45203
0 years, female, NA, stage:2, alive, 1170 days
2348.3
DO23532
0 years, female, NA, stage:1, alive, 960 days
2328.4
DO45165
0 years, male, NA, stage:2, alive, 690 days
2283.6
DO23512
0 years, male, NA, stage:1, alive, 1260 days
2240.2
DO45117
0 years, female, NA, stage:2, dead, 1110 days
2221.8
DO45145
0 years, male, NA, stage:3, dead, 60 days
2208.1
DO48757
0 years, female, NA, stage:3, alive, 480 days
2205.6
DO48681
0 years, male, NA, stage:2, alive, 900 days
2168.8
DO45131
0 years, male, NA, stage:4, dead, 360 days
2158.4
DO48697
0 years, female, NA, stage:2, dead, 810 days
2131.4
DO45227
0 years, female, NA, stage:2, alive, 1020 days
2114.4
DO23527
0 years, male, NA, stage:1, alive, 1050 days
2108.4
DO45177
0 years, female, NA, stage:3, alive, 1260 days
2108.1
DO48704
0 years, female, NA, stage:3, alive, 750 days
2062.0
DO50787
0 years, male, NA, stage:3, alive, 480 days
2004.0
DO23515
0 years, male, NA, stage:2, alive, 1230 days
1995.8
DO23518
0 years, male, NA, stage:2, alive, 1320 days
1993.4
DO45169
0 years, male, NA, stage:3, alive, 1350 days
1988.6
DO45093
0 years, male, NA, stage:2, dead, 720 days
1987.1
DO45099
0 years, male, NA, stage:3, alive, 1590 days
1949.0
DO45129
0 years, male, NA, stage:3, alive, 1470 days
1862.9
DO45149
0 years, female, NA, stage:2, alive, 1260 days
1817.9
DO50832
0 years, male, NA, stage:3, alive, 90 days
1798.0
DO50808
0 years, male, NA, stage:2, alive, 570 days
1790.9
DO48721
0 years, female, NA, stage:1, alive, 900 days
1789.8
DO48723
0 years, male, NA, stage:1, alive, 600 days
1767.4
DO23511
0 years, female, NA, stage:3, dead, 180 days
1743.0
DO45141
0 years, male, NA, stage:2, alive, 1320 days
1720.8
DO48720
0 years, female, NA, stage:2, alive, 570 days
1639.1
DO50807
0 years, male, NA, stage:1, alive, 540 days
1632.6
DO23546
0 years, male, NA, stage:2, alive, 1050 days
1607.9
DO23534
0 years, male, NA, stage:2, alive, 840 days
1593.8
DO50840
0 years, male, NA, stage:2, alive, 330 days
1506.8
DO45237
0 years, male, NA, stage:2, alive, 900 days
1500.6
DO50857
0 years, male, NA, stage:2, alive, 210 days
1455.7
DO45217
0 years, female, NA, stage:3, dead, 270 days
1453.8
DO50809
0 years, male, NA, stage:3, dead, 720 days
1443.1
DO50799
0 years, female, NA, stage:2, alive, 540 days
1426.5
DO50818
0 years, male, NA, stage:2, alive, 510 days
1416.0
DO45157
0 years, male, NA, stage:2, alive, 1980 days
1387.3
DO23519
0 years, male, NA, stage:3, alive, 630 days
1379.7
DO50778
0 years, male, NA, stage:4, alive, 630 days
1378.9
DO45273
0 years, male, NA, stage:2, alive, 480 days
1355.7
DO50800
0 years, male, NA, stage:2, alive, 510 days
1319.3
DO45092
0 years, male, NA, stage:4, dead, 1200 days
1267.0
DO45175
0 years, male, NA, stage:2, alive, 1140 days
1201.4
DO48693
0 years, male, NA, stage:2, alive, 900 days
1182.7
DO23541
0 years, male, NA, stage:2, alive, 930 days
1173.1
DO45243
0 years, female, NA, stage:3, alive, 930 days
1158.5
DO48733
0 years, male, NA, stage:2, alive, 600 days
1144.3
DO50815
0 years, male, NA, stage:3, alive, 150 days
1134.5
DO45231
0 years, male, NA, stage:2, alive, 930 days
1113.1
DO48706
0 years, male, NA, stage:2, alive, 870 days
1109.0
DO50825
0 years, male, NA, stage:2, alive, 390 days
1096.2
DO45095
0 years, male, NA, stage:2, alive, 1620 days
1078.1
DO45097
0 years, male, NA, stage:3, alive, 1620 days
1068.2
DO45193
0 years, female, NA, stage:4, dead, 120 days
1064.2
DO50850
0 years, male, NA, stage:3, alive, 720 days
1022.2
DO45235
0 years, female, NA, stage:1, alive, 900 days
1015.5
DO50804
0 years, male, NA, stage:2, alive, 720 days
992.6
DO48717
0 years, male, NA, stage:4, dead, 180 days
945.4
DO45103
0 years, male, NA, stage:3, alive, 450 days
935.5
DO45113
0 years, male, NA, stage:3, alive, 1560 days
910.8
DO45137
0 years, male, NA, stage:1, alive, 1320 days
904.8
DO23524
0 years, female, NA, stage:2, alive, 1050 days
901.7
DO48736
0 years, female, NA, stage:1, alive, 600 days
888.7
DO23537
0 years, male, NA, stage:2, dead, 900 days
872.2
DO50839
0 years, female, NA, stage:3, alive, 330 days
816.9
DO45241
0 years, male, NA, stage:1, alive, 1080 days
815.5
DO50817
0 years, male, NA, stage:2, alive, 390 days
786.0
DO23540
0 years, male, NA, stage:1, alive, 750 days
737.7
DO48695
0 years, male, NA, stage:2, alive, 720 days
733.0
DO23528
0 years, female, NA, stage:2, alive, 1020 days
715.6
DO48672
0 years, male, NA, stage:2, alive, 450 days
698.6
DO50783
0 years, male, NA, stage:3, alive, 480 days
694.4
DO45123
0 years, female, NA, stage:2, dead, 570 days
672.7
DO23548
0 years, female, NA, stage:1, alive, 840 days
668.3
DO23543
0 years, male, NA, stage:2, alive, 1020 days
652.1
DO50791
0 years, female, NA, stage:1, dead, 480 days
643.8
DO45163
0 years, male, NA, stage:2, alive, 960 days
623.3
DO45281
0 years, male, NA, stage:4, alive, 750 days
611.6
DO45207
0 years, male, NA, stage:1, alive, 1050 days
556.8
DO23530
0 years, male, NA, stage:4, dead, 180 days
545.6
DO48701
0 years, male, NA, stage:2, alive, 780 days
489.0
DO45121
0 years, male, NA, stage:3, alive, 1530 days
481.9
DO45197
0 years, male, NA, stage:2, alive, 1170 days
473.8
DO48679
0 years, male, NA, stage:2, alive, 1200 days
470.8
DO23526
0 years, male, NA, stage:3, alive, 1050 days
461.9
DO45139
0 years, male, NA, stage:3, alive, 1320 days
441.0
DO50859
0 years, male, NA, stage:2, alive, 180 days
437.8
DO50802
0 years, male, NA, stage:2, alive, 930 days
429.6
DO50822
0 years, male, NA, stage:2, alive, 510 days
416.0
DO23536
0 years, male, NA, stage:2, alive, 930 days
395.1
DO45263
0 years, male, NA, stage:3, dead, 270 days
342.7
DO48677
0 years, male, NA, stage:3, alive, 1140 days
335.7
DO23539
0 years, male, NA, stage:1, alive, 1110 days
305.3
DO45249
0 years, male, NA, stage:1, alive, 630 days
278.6
DO45159
0 years, male, NA, stage:3, alive, 1470 days
275.1
DO23514
0 years, male, NA, stage:2, alive, 1290 days
256.7
DO45299
0 years, female, NA, stage:1, alive, 1440 days
244.5
DO23542
0 years, male, NA, stage:3, alive, 960 days
240.2
DO23509
0 years, male, NA, stage:3, dead, 780 days
237.0
DO23549
0 years, male, NA, stage:3, alive, 990 days
228.7
DO45225
0 years, male, NA, stage:1, alive, 1050 days
222.9
DO23529
0 years, male, NA, stage:4, alive, 930 days
214.5
DO45251
0 years, female, NA, stage:2, alive, 900 days
213.5
DO45171
0 years, male, NA, stage:3, alive, 600 days
204.8
DO48746
0 years, male, NA, stage:3, alive, 570 days
187.6
DO23547
0 years, male, NA, stage:1, alive, 1020 days
182.7
DO45185
0 years, male, NA, stage:2, alive, 600 days
173.9
DO50811
0 years, male, NA, stage:1, alive, 450 days
171.3
DO45301
0 years, male, NA, stage:2, dead, 1440 days
139.3
DO45259
0 years, male, NA, stage:3, alive, 330 days
135.8
DO50829
0 years, male, NA, stage:3, alive, 570 days
132.8
DO50798
0 years, male, NA, stage:3, dead, 30 days
128.4
DO45267
0 years, male, NA, stage:3, dead, 570 days
125.1
DO45289
0 years, female, NA, stage:3, alive, 360 days
122.7
DO45189
0 years, female, NA, stage:2, alive, 1200 days
114.3
DO45133
0 years, male, NA, stage:3, dead, 660 days
106.2
DO50814
0 years, male, NA, stage:3, alive, 420 days
102.5
DO50844
0 years, male, NA, stage:4, alive, 300 days
98.3
DO45287
0 years, male, NA, stage:1, alive, 390 days
95.6
DO23513
0 years, male, NA, stage:3, alive, 1200 days
94.1
DO50816
0 years, male, NA, stage:2, alive, 390 days
84.1
DO45205
0 years, female, NA, stage:2, dead, 90 days
78.3
DO23516
0 years, male, NA, stage:3, dead, 20 days
77.8
DO48747
0 years, male, NA, stage:3, alive, 540 days
75.5
DO45305
0 years, male, NA, stage:4, alive, 300 days
69.4
DO48682
0 years, female, NA, stage:3, dead, 120 days
52.7
DO48732
0 years, male, NA, stage:3, alive, 630 days
46.1
DO23533
0 years, male, NA, stage:2, alive, 900 days
38.3
DO23521
0 years, male, NA, stage:3, alive, 1110 days
30.3
DO45155
0 years, male, NA, stage:2, alive, 2160 days
22.6
DO45283
0 years, male, NA, stage:3, alive, 510 days
20.0
DO45253
0 years, male, NA, stage:2, alive, 870 days
15.9
DO45209
0 years, male, NA, stage:4, alive, 1350 days
12.8
DO45277
0 years, male, NA, stage:3, alive, 600 days
11.5
DO48719
0 years, male, NA, stage:2, alive, 690 days
10.0
DO45245
0 years, female, NA, stage:2, dead, 240 days
7.3
DO45285
0 years, male, NA, stage:3, alive, 480 days
6.9
DO45279
0 years, male, NA, stage:3, alive, 1290 days
6.5
DO45303
0 years, female, NA, stage:3, alive, 990 days
5.6
DO45297
0 years, female, NA, stage:4, dead, 1260 days
3.4
DO45275
0 years, male, NA, stage:3, dead, 10 days
2.3
DO23523
0 years, male, NA, stage:3, alive, 1080 days
2.1
DO45307
0 years, female, NA, stage:4, dead, 240 days
0.9
DO45211
0 years, male, NA, stage:3, alive, 240 days
0.8
Show allShow less
LIVER HEPATOCELLULAR CARCINOMA - Protein relative expression (CPTAC)
Number of samples
330
Samples
Sample ID
Sample type
nRPX
617
Tumor
1.1
742
Normal
1.0
223
Tumor
1.0
494
Normal
0.9
938
Normal
0.9
738
Normal
0.8
864
Normal
0.8
546
Normal
0.8
462
Normal
0.8
356
Normal
0.8
926
Normal
0.8
745
Tumor
0.8
924
Normal
0.8
716
Normal
0.8
698
Normal
0.7
966
Normal
0.7
852
Normal
0.7
958
Normal
0.7
1044
Normal
0.7
363
Tumor
0.7
228
Normal
0.7
912
Normal
0.7
862
Normal
0.7
186
Normal
0.7
452
Normal
0.7
955
Tumor
0.7
728
Normal
0.7
286
Normal
0.7
922
Normal
0.7
1042
Normal
0.7
723
Tumor
0.7
1026
Normal
0.7
518
Normal
0.7
1016
Normal
0.6
746
Normal
0.6
982
Normal
0.6
474
Normal
0.6
1043
Tumor
0.6
918
Normal
0.6
944
Normal
0.6
956
Normal
0.6
416
Normal
0.6
424
Normal
0.6
558
Normal
0.6
572
Normal
0.6
353
Tumor
0.6
984
Normal
0.6
113
Tumor
0.6
514
Normal
0.6
1022
Normal
0.6
488
Normal
0.6
448
Normal
0.6
882
Normal
0.6
414
Normal
0.5
432
Normal
0.5
1046
Normal
0.5
1032
Normal
0.5
128
Normal
0.5
436
Normal
0.5
884
Normal
0.5
968
Normal
0.5
778
Normal
0.5
722
Normal
0.5
564
Normal
0.5
554
Normal
0.5
196
Normal
0.5
756
Normal
0.5
364
Normal
0.5
878
Normal
0.5
358
Normal
0.5
916
Normal
0.5
528
Normal
0.5
214
Normal
0.5
412
Normal
0.5
484
Normal
0.5
472
Normal
0.5
332
Normal
0.5
111
Normal
0.4
516
Normal
0.4
513
Tumor
0.4
714
Normal
0.4
568
Normal
0.4
868
Normal
0.4
136
Normal
0.4
616
Normal
0.4
696
Normal
0.4
126
Normal
0.4
114
Normal
0.4
976
Normal
0.4
212
Normal
0.4
952
Normal
0.4
858
Normal
0.4
422
Normal
0.4
978
Normal
0.4
328
Normal
0.4
786
Normal
0.4
272
Normal
0.4
142
Normal
0.4
284
Normal
0.4
534
Normal
0.4
1014
Normal
0.4
662
Normal
0.4
816
Normal
0.4
312
Normal
0.4
628
Normal
0.4
874
Normal
0.4
686
Normal
0.3
146
Normal
0.3
866
Normal
0.3
468
Normal
0.3
618
Normal
0.3
428
Normal
0.3
466
Normal
0.3
1025
Tumor
0.3
426
Normal
0.3
964
Normal
0.3
526
Normal
0.3
446
Normal
0.3
362
Normal
0.3
1028
Normal
0.3
818
Normal
0.3
232
Normal
0.3
224
Normal
0.3
298
Normal
0.3
132
Normal
0.3
538
Normal
0.2
354
Normal
0.2
574
Normal
0.2
824
Normal
0.2
258
Normal
0.2
314
Normal
0.2
636
Normal
0.2
342
Normal
0.2
464
Normal
0.2
222
Normal
0.2
785
Tumor
0.2
481
Tumor
0.2
394
Normal
0.2
218
Normal
0.2
376
Normal
0.2
664
Normal
0.2
434
Normal
0.2
672
Normal
0.2
386
Normal
0.1
482
Normal
0.1
172
Normal
0.1
368
Normal
0.1
262
Normal
0.1
467
Tumor
0.1
352
Normal
0.1
124
Normal
0.1
517
Tumor
0.1
744
Normal
0.1
188
Normal
0.1
366
Normal
0.1
666
Normal
0.1
138
Normal
0.1
415
Tumor
0.1
914
Normal
0.0
388
Normal
0.0
145
Tumor
0.0
278
Normal
0.0
392
Normal
0.0
148
Normal
0.0
327
Tumor
0.0
967
Tumor
0.0
648
Normal
0.0
456
Normal
0.0
851
Tumor
0.0
954
Normal
0.0
642
Normal
0.0
524
Normal
0.0
227
Tumor
0.0
162
Normal
-0.1
391
Tumor
-0.1
1045
Tumor
-0.1
492
Normal
-0.1
727
Tumor
-0.1
873
Tumor
-0.1
498
Normal
-0.1
478
Normal
-0.1
344
Normal
-0.1
981
Tumor
-0.2
536
Normal
-0.2
393
Tumor
-0.2
187
Tumor
-0.2
477
Tumor
-0.2
285
Tumor
-0.3
195
Tumor
-0.3
721
Tumor
-0.3
384
Normal
-0.3
131
Tumor
-0.3
396
Normal
-0.3
435
Tumor
-0.3
563
Tumor
-0.3
191
Tumor
-0.3
217
Tumor
-0.3
1031
Tumor
-0.4
268
Normal
-0.4
341
Tumor
-0.4
444
Normal
-0.4
755
Tumor
-0.4
147
Tumor
-0.4
515
Tumor
-0.5
975
Tumor
-0.5
413
Tumor
-0.5
192
Normal
-0.5
137
Tumor
-0.5
724
Normal
-0.6
815
Tumor
-0.6
627
Tumor
-0.6
261
Tumor
-0.6
447
Tumor
-0.6
365
Tumor
-0.6
461
Tumor
-0.6
433
Tumor
-0.7
615
Tumor
-0.7
421
Tumor
-0.7
361
Tumor
-0.7
331
Tumor
-0.7
135
Tumor
-0.8
921
Tumor
-0.8
465
Tumor
-0.8
537
Tumor
-0.8
817
Tumor
-0.8
857
Tumor
-0.8
557
Tumor
-0.8
937
Tumor
-0.9
431
Tumor
-0.9
957
Tumor
-0.9
267
Tumor
-0.9
387
Tumor
-0.9
423
Tumor
-0.9
1015
Tumor
-1.0
814
Normal
-1.0
743
Tumor
-1.0
877
Tumor
-1.0
185
Tumor
-1.0
141
Tumor
-1.0
523
Tumor
-1.1
127
Tumor
-1.1
715
Tumor
-1.1
665
Tumor
-1.1
963
Tumor
-1.1
925
Tumor
-1.1
671
Tumor
-1.1
411
Tumor
-1.2
641
Tumor
-1.2
983
Tumor
-1.2
777
Tumor
-1.2
917
Tumor
-1.2
571
Tumor
-1.2
823
Tumor
-1.2
1021
Tumor
-1.2
355
Tumor
-1.2
535
Tumor
-1.3
445
Tumor
-1.3
865
Tumor
-1.3
471
Tumor
-1.3
357
Tumor
-1.3
883
Tumor
-1.3
881
Tumor
-1.3
491
Tumor
-1.3
112
Tumor
-1.3
951
Tumor
-1.3
455
Tumor
-1.4
695
Tumor
-1.4
737
Tumor
-1.4
965
Tumor
-1.4
493
Tumor
-1.4
943
Tumor
-1.4
451
Tumor
-1.4
1013
Tumor
-1.4
297
Tumor
-1.5
473
Tumor
-1.5
953
Tumor
-1.5
271
Tumor
-1.5
483
Tumor
-1.5
171
Tumor
-1.5
161
Tumor
-1.5
367
Tumor
-1.5
463
Tumor
-1.6
867
Tumor
-1.6
277
Tumor
-1.6
713
Tumor
-1.6
221
Tumor
-1.6
313
Tumor
-1.6
213
Tumor
-1.6
863
Tumor
-1.6
545
Tumor
-1.7
913
Tumor
-1.7
497
Tumor
-1.7
283
Tumor
-1.7
567
Tumor
-1.7
553
Tumor
-1.8
861
Tumor
-1.8
923
Tumor
-1.8
375
Tumor
-1.8
1027
Tumor
-1.8
661
Tumor
-1.8
813
Tumor
-1.9
351
Tumor
-1.9
443
Tumor
-2.0
977
Tumor
-2.0
647
Tumor
-2.0
663
Tumor
-2.0
741
Tumor
-2.0
311
Tumor
-2.1
915
Tumor
-2.1
343
Tumor
-2.2
257
Tumor
-2.2
525
Tumor
-2.2
1041
Tumor
-2.2
211
Tumor
-2.2
533
Tumor
-2.2
125
Tumor
-2.2
123
Tumor
-2.2
527
Tumor
-2.2
383
Tumor
-2.3
427
Tumor
-2.3
685
Tumor
-2.3
635
Tumor
-2.3
573
Tumor
-2.4
425
Tumor
-2.4
231
Tumor
-2.4
385
Tumor
-2.5
395
Tumor
-2.5
487
Tumor
-2.5
697
Tumor
-2.5
911
Tumor
-2.7
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LIVER CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.