HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:71.8 nTPM
HPA Brain:50.3 nTPM
GTEx:71.8 nTPM
FANTOM5:71.3 Scaled Tags Per Million
Pig:237.3 nTPM
Mouse:126.0 nTPM
Allen mouse:7.4 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 50.3
Sample id Sample description nTPM
Hippocampus
nTPM: 49.0
1898 Male, age 80, left hemisphere 57.0
2621 Female, age 67, right hemisphere 52.4
1855 Male, age 76, left hemisphere 51.4
2529 Female, age 94, left hemisphere 48.2
1911 Female, age 85, right hemisphere 44.5
2148 Female, age 91, left hemisphere 40.4
Dentate gyrus
nTPM: 47.7
2010 Male, age 76, both hemispheres 53.7
2530 Female, age 94, left hemisphere 51.7
1927 Female, age 91, both hemispheres 47.6
2528 Male, age 74, both hemispheres 46.4
2531 Female, age 67, both hemispheres 44.1
2246 Female, age 85, both hemispheres 42.7
Entorhinal gyrus
nTPM: 47.3
1787 Male, age 76, left hemisphere 51.8
1938 Female, age 85, left hemisphere 48.9
2117 Female, age 91, right hemisphere 48.7
2764 Male, age 80, right hemisphere 48.5
2613 Female, age 94, left hemisphere 43.4
2686 Male, age 75, right hemisphere 42.2
Hippocampus, CA1
nTPM: 46.9
2749 Male, age 80, left hemisphere 54.4
2045 Male, age 76, both hemispheres 49.0
1873 Female, age 85, both hemispheres 45.9
2082 Female, age 91, right hemisphere 42.9
2527 Male, age 74, both hemispheres 42.5
Hippocampus, CA2
nTPM: 47.2
1892 Male, age 76, both hemispheres 55.4
1963 Male, age 80, left hemisphere 48.0
1940 Female, age 85, left hemisphere 47.2
2437 Female, age 94, left hemisphere 47.0
2113 Female, age 91, right hemisphere 44.2
2249 Male, age 74, both hemispheres 41.6
Hippocampus, CA3
nTPM: 48.9
1867 Male, age 76, both hemispheres 55.3
2861 Female, age 67, both hemispheres 51.8
2436 Male, age 74, both hemispheres 49.7
2620 Female, age 94, left hemisphere 45.8
1891 Female, age 85, both hemispheres 45.5
2137 Male, age 80, left hemisphere 45.2
Parahippocampal cortex
nTPM: 46.1
2018 Male, age 76, both hemispheres 56.4
1850 Male, age 80, both hemispheres 49.0
1933 Female, age 85, both hemispheres 48.5
2250 Female, age 67, right hemisphere 47.2
2692 Male, age 74, both hemispheres 47.0
1990 Female, age 91, right hemisphere 45.4
2245 Female, age 91, both hemispheres 43.3
2622 Female, age 67, right hemisphere 43.3
2532 Female, age 72, left hemisphere 41.3
2693 Female, age 94, both hemispheres 39.2
Perirhinal gyrus
nTPM: 50.3
1847 Female, age 91, left hemisphere 56.8
1794 Male, age 80, right hemisphere 51.4
1841 Female, age 85, right hemisphere 50.3
2521 Female, age 94, right hemisphere 47.7
2848 Male, age 76, right hemisphere 45.1
Subiculum
nTPM: 47.3
2042 Male, age 76, both hemispheres 53.4
2619 Male, age 74, both hemispheres 47.7
2438 Female, age 94, left hemisphere 47.1
1977 Female, age 85, both hemispheres 47.0
1901 Male, age 80, both hemispheres 46.5
2729 Female, age 91, right hemisphere 42.5

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 71.8
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 71.8
Samples: 197

Max nTPM: 122.5
Min nTPM: 50.3
Std nTPM: 11.4
Median nTPM: 70.5
GTEX-OHPN-0011-R1A-SM-2I5GB 60-69 years, female 122.5
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 120.7
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 113.7
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 105.2
GTEX-16NPV-0011-R1b-SM-7MGVZ 50-59 years, female 101.3
GTEX-17HII-0011-R1b-SM-7MGVW 50-59 years, male 97.4
GTEX-12WSH-0011-R1a-SM-5GU5V 50-59 years, male 97.3
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 96.8
GTEX-1HSMO-0011-R1a-SM-CM2SV 60-69 years, male 95.3
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 94.0
GTEX-11TUW-0011-R1a-SM-DO92S 60-69 years, male 93.4
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 71.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 71.3
FF:10169-103B7 60 years, female 81.0
FF:10153-102I9 76 years, female 61.6

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 237.3
Pig sample Sample description nTPM
Subiculum
nTPM: 194.4
Samples: 4

Max nTPM: 227.6
Min nTPM: 161.3
Sample A Female 227.6
Sample B Female 197.7
Sample C Male 161.3
Sample D Male 190.9
Dorsal hippocampus
nTPM: 237.3
Samples: 4

Max nTPM: 292.8
Min nTPM: 182.0
Sample A Female 292.8
Sample B Female 230.3
Sample C Male 244.1
Sample D Male 182.0
Entorhinal cortex
nTPM: 184.0
Samples: 4

Max nTPM: 209.7
Min nTPM: 152.2
Sample A Female 190.5
Sample B Female 209.7
Sample C Male 183.7
Sample D Male 152.2
Ventral hippocampus
nTPM: 212.3
Samples: 4

Max nTPM: 253.3
Min nTPM: 175.2
Sample A Female 200.3
Sample B Female 175.2
Sample C Male 253.3
Sample D Male 220.5

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 126.0
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 121.9
Samples: 4

Max nTPM: 130.4
Min nTPM: 112.5
Sample A Male 112.5
Sample B Male 120.6
Sample C Female 130.4
Sample D Female 124.2
Hippocampal formation
nTPM: 126.1
Samples: 4

Max nTPM: 136.4
Min nTPM: 111.2
Sample A Male 136.4
Sample B Male 111.2
Sample C Female 134.7
Sample D Female 121.9

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 7.4
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 7.4
76081939 Antisense, RP_060626_01_B02, Mouse strain C57BL/6J (56 days, male) 7.8
121097 Antisense, RP_040507_01_A03, Mouse strain C57BL/6J (56 days, male) 7.2
77620333 Antisense, RP_070205_01_B07, Mouse strain C57BL/6J (56 days, male) 7.2
77869814 Antisense, RP_070205_01_B07, Mouse strain C57BL/6J (56 days, male) 2.0

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