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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
Survival analysis data not available.
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
0.6
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
15.7
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
4.9
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
3.7
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
3.0
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
2.0
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
1.5
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
1.2
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
1.0
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
0.8
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
0.8
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
0.7
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
0.7
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
0.7
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
0.6
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
0.6
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
0.5
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
0.5
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
0.5
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
0.4
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
0.4
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
0.3
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
0.3
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
0.3
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
0.2
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
0.2
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
0.1
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
0.1
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
0.1
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
0.1
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
0.1
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
0.1
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
0.1
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
0.1
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
0.1
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
0.1
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
0.1
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
0.1
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
0.1
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
0.1
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
0.1
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
0.1
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
0.1
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
0.1
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
0.0
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
0.0
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
0.0
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
0.0
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
0.0
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
0.0
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
0.0
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
0.0
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
0.0
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
0.0
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
0.0
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
0.0
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
0.0
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
0.0
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
0.0
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
0.0
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
0.0
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
0.0
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
0.0
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
0.0
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
INAVA is potential prognostic, high expression is favorable in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
9.3
Number of samples
521
Samples
Sample
Description
TPM
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
37.7
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
37.1
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
33.7
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
33.0
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
32.4
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
31.3
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
30.5
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
27.1
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
26.6
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
26.0
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
26.0
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
25.8
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
25.8
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
25.4
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
24.2
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
23.9
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
23.4
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
23.4
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
23.0
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
22.7
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
22.3
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
22.3
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
22.2
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
21.9
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
21.7
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
21.5
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
21.5
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
21.4
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
21.4
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
21.3
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
20.6
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
20.5
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
20.5
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
20.3
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
20.3
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
20.2
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
20.1
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
19.9
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
19.8
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
19.8
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
19.8
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
19.7
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
19.4
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
19.3
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
19.2
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
18.9
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
18.9
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
18.8
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
18.7
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
18.6
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
18.5
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
18.4
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
18.3
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
18.3
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
18.2
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
18.2
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
18.1
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
18.0
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
17.8
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
17.8
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
17.7
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
17.6
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
17.6
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
17.5
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
17.4
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
17.2
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
17.2
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
17.1
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
17.0
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
16.6
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
16.6
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
16.5
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
16.4
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
16.3
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
16.3
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
16.2
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
16.0
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
16.0
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
16.0
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
15.9
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
15.9
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
15.6
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
15.5
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
15.5
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
15.4
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
15.2
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
15.1
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
15.1
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
15.1
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
15.1
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
15.0
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
14.8
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
14.7
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
14.6
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
14.6
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
14.5
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
14.4
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
14.4
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
14.4
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
14.4
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
14.3
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
14.3
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
14.2
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
14.2
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
14.2
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
14.0
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
14.0
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
13.8
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
13.8
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
13.8
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
13.8
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
13.7
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
13.7
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
13.6
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
13.5
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
13.5
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
13.4
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
13.3
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
13.3
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
13.2
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
13.2
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
13.2
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
13.1
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
13.0
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
13.0
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
12.9
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
12.9
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
12.8
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
12.8
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
12.8
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
12.7
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
12.7
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
12.7
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
12.6
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
12.6
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
12.5
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
12.4
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
12.4
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
12.3
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
12.3
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
12.2
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
12.2
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
12.2
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
12.1
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
12.1
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
12.1
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
12.1
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
12.1
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
12.1
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
12.0
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
12.0
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
11.8
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
11.8
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
11.8
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
11.8
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
11.8
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
11.6
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
11.6
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
11.5
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
11.5
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
11.4
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
11.4
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
11.3
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
11.3
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
11.2
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
11.2
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
11.1
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
11.1
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
11.1
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
11.0
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
11.0
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
11.0
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
10.9
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
10.9
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
10.9
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
10.9
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
10.8
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
10.7
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
10.7
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
10.7
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
10.7
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
10.7
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
10.7
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
10.6
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
10.6
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
10.6
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
10.6
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
10.6
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
10.4
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
10.3
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
10.3
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
10.2
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
10.2
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
10.2
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
10.2
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
10.2
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
10.1
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
10.1
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
10.1
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
10.0
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
10.0
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
9.9
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
9.9
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
9.9
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
9.9
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
9.9
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
9.8
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
9.8
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
9.8
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
9.8
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
9.7
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
9.7
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
9.6
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
9.6
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
9.5
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
9.5
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
9.4
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
9.4
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
9.4
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
9.4
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
9.3
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
9.3
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
9.3
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
9.2
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
9.2
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
9.2
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
9.1
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
9.1
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
9.0
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
9.0
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
8.9
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
8.9
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
8.9
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
8.9
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
8.9
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
8.9
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
8.9
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
8.8
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
8.8
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
8.8
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
8.7
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
8.7
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
8.7
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
8.6
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
8.6
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
8.6
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
8.6
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
8.6
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
8.6
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
8.5
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
8.5
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
8.5
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
8.5
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
8.5
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
8.4
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
8.4
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
8.4
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
8.4
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
8.4
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
8.3
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
8.3
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
8.3
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
8.3
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
8.3
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
8.2
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
8.2
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
8.2
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
8.2
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
8.1
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
8.1
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
8.0
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
8.0
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
8.0
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
8.0
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
7.9
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
7.9
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
7.9
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
7.9
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
7.7
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
7.7
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
7.7
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
7.6
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
7.6
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
7.6
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
7.6
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
7.6
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
7.5
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
7.5
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
7.4
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
7.3
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
7.3
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
7.3
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
7.3
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
7.3
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
7.3
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
7.3
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
7.2
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
7.2
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
7.2
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
7.2
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
7.1
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
7.1
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
7.0
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
7.0
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
7.0
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
7.0
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
6.9
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
6.9
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
6.9
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
6.9
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
6.9
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
6.8
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
6.8
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
6.8
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
6.8
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
6.8
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
6.8
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
6.7
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
6.7
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
6.7
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
6.6
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
6.6
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
6.6
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
6.6
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
6.6
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
6.6
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
6.6
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
6.5
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
6.5
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
6.5
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
6.5
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
6.4
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
6.4
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
6.4
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
6.4
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
6.4
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
6.4
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
6.4
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
6.3
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
6.3
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
6.2
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
6.2
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
6.1
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
6.1
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
6.1
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
6.1
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
6.0
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
5.9
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
5.9
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
5.8
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
5.7
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
5.7
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
5.7
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
5.6
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
5.6
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
5.6
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
5.6
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
5.5
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
5.5
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
5.5
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
5.5
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
5.5
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
5.4
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
5.4
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
5.4
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
5.3
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
5.3
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
5.2
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
5.2
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
5.1
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
5.1
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
5.1
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
5.0
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
5.0
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
5.0
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
5.0
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
5.0
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
5.0
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
5.0
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
5.0
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
5.0
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
4.9
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
4.9
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
4.8
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
4.8
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
4.8
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
4.8
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
4.8
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
4.7
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
4.7
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
4.7
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
4.6
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
4.6
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
4.6
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
4.6
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
4.5
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
4.5
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
4.5
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
4.5
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
4.5
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
4.4
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
4.4
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
4.4
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
4.4
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
4.3
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
4.2
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
4.2
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
4.2
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
4.2
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
4.2
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
4.2
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
4.2
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
4.2
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
4.1
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
4.1
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
4.0
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
4.0
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
4.0
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
3.9
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
3.9
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
3.9
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
3.9
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
3.8
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
3.8
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
3.8
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
3.8
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
3.8
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
3.8
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
3.7
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
3.7
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
3.6
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
3.6
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
3.6
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
3.5
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
3.5
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
3.3
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
3.2
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
3.1
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
3.1
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
3.0
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
2.9
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
2.9
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
2.9
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
2.8
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
2.8
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
2.8
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
2.8
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
2.7
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
2.7
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
2.7
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
2.6
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
2.6
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
2.6
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
2.5
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
2.5
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
2.5
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
2.4
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
2.4
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
2.4
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
2.3
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
2.3
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
2.3
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
2.2
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
2.2
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
2.2
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
1.9
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
1.9
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
1.9
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
1.9
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
1.9
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
1.9
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
1.8
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
1.8
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
1.8
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
1.6
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
1.6
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
1.6
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
1.6
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
1.5
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
1.5
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
1.5
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
1.5
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
1.5
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
1.4
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
1.4
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
1.4
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
1.3
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
1.3
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
1.2
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
1.1
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
1.0
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
1.0
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
0.9
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
0.9
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
0.9
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
0.7
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
0.7
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
0.7
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
0.6
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
0.6
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
0.5
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
0.5
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
0.4
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
0.4
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
0.4
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
0.4
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
0.3
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
0.3
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
0.3
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
0.3
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
0.2
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
0.1
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
0.1
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
0.1
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
0.1
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
0.1
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
0.1
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
0.1
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
0.1
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
0.1
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
INAVA is not prognostic in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
14.1
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
44.5
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
40.8
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
39.8
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
36.6
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
36.0
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
32.3
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
31.6
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
26.3
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
22.2
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
21.9
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
21.6
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
21.5
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
20.8
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
20.4
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
20.3
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
20.2
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
20.1
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
20.1
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
20.0
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
20.0
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
19.9
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
19.6
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
19.5
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
19.5
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
18.8
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
18.8
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
18.7
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
18.5
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
18.2
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
18.1
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
17.7
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
17.7
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
17.4
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
16.6
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
16.6
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
16.5
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
16.3
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
16.2
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
16.2
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
16.1
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
15.8
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
15.8
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
15.6
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
15.4
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
15.2
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
15.1
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
14.2
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
12.9
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
12.5
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
12.3
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
12.1
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
11.6
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
11.4
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
11.3
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
11.3
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
11.2
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
11.0
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
10.9
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
10.7
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
10.6
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
10.6
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
10.3
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
10.2
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
9.7
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
9.5
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
9.5
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
9.4
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
9.4
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
9.4
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
9.3
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
9.2
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
9.2
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
8.7
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
8.3
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
8.3
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
8.1
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
8.0
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
7.8
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
7.7
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
7.6
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
7.5
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
7.5
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
6.9
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
6.8
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
5.8
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
5.4
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
4.8
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
4.3
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
4.3
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
4.3
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
4.0
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
3.9
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
3.9
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
3.6
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
2.7
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
2.2
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
1.8
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
1.7
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
0.8
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
INAVA is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
14.2
Number of samples
282
Samples
Sample
Description
TPM
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
102.2
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
53.0
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
52.6
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
52.5
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
52.5
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
50.7
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
47.2
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
45.7
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
44.5
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
42.1
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
39.3
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
38.2
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
37.8
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
37.5
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
37.5
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
36.2
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
36.2
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
36.2
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
35.3
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
34.9
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
34.5
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
33.4
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
33.3
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
32.8
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
32.4
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
31.5
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
31.2
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
30.5
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
30.1
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
29.6
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
29.0
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
28.8
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
28.7
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
28.5
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
28.4
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
27.5
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
27.0
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
26.9
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
26.8
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
26.7
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
26.5
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
26.4
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
26.2
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
25.7
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
25.6
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
25.2
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
25.1
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
25.1
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
24.2
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
24.2
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
23.3
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
23.2
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
22.8
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
22.2
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
22.2
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
22.1
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
21.9
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
21.9
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
21.8
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
21.7
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
21.5
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
21.4
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
21.2
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
21.0
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
20.9
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
20.4
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
20.3
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
20.3
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
20.2
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
20.0
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
19.9
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
19.6
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
19.4
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
19.2
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
19.1
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
19.0
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
18.8
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
18.7
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
18.6
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
18.5
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
18.4
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
18.4
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
18.0
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
17.9
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
17.7
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
17.3
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
17.1
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
17.0
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
17.0
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
16.8
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
16.8
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
16.7
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
16.7
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
16.6
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
16.5
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
16.0
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
15.9
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
15.8
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
15.7
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
15.6
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
15.5
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
15.5
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
15.5
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
15.4
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
15.4
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
15.2
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
15.2
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
14.8
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
14.6
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
14.6
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
14.4
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
14.3
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
14.3
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
14.2
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
14.0
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
13.9
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
13.5
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
13.3
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
13.2
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
13.0
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
12.9
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
12.5
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
12.5
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
12.5
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
12.4
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
12.2
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
12.2
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
12.2
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
12.1
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
12.0
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
11.9
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
11.9
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
11.8
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
11.7
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
11.7
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
11.6
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
11.5
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
11.4
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
11.3
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
11.3
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
11.3
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
11.2
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
11.1
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
11.0
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
11.0
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
11.0
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
10.9
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
10.7
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
10.7
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
10.7
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
10.7
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
10.6
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
10.6
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
10.5
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
10.5
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
10.4
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
10.2
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
10.0
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
9.9
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
9.8
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
9.8
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
9.8
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
9.7
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
9.1
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
9.1
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
9.1
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
9.0
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
8.9
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
8.9
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
8.9
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
8.6
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
8.6
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
8.6
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
8.5
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
8.4
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
8.3
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
8.2
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
8.2
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
8.2
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
8.1
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
8.1
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
7.9
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
7.9
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
7.7
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
7.7
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
7.6
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
7.5
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
7.5
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
7.5
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
7.4
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
7.3
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
7.2
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
7.1
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
7.1
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
6.7
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
6.5
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
6.3
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
6.3
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
6.3
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
6.2
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
6.2
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
6.0
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
6.0
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
6.0
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
5.9
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
5.8
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
5.8
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
5.8
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
5.7
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
5.6
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
5.4
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
5.4
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
5.3
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
5.3
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
5.3
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
5.2
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
5.1
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
5.0
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
5.0
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
4.9
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
4.9
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
4.8
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
4.7
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
4.6
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
4.6
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
4.5
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
4.2
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
3.9
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
3.8
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
3.7
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
3.5
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
3.5
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
3.4
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
3.4
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
3.4
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
3.3
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
3.2
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
3.2
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
3.1
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
3.1
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
2.9
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
2.8
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
2.7
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
2.6
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
2.6
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
2.5
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
2.5
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
2.4
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
2.4
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
2.3
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
2.2
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
1.8
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
1.7
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
1.5
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
1.5
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
1.5
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
1.3
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
1.3
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
1.3
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
1.2
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
1.1
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
1.1
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
1.0
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
1.0
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
1.0
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
0.9
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
0.7
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
0.6
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
0.5
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
0.4
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
0.3
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
0.3
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
0.1
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
0.0
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
0.0
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
0.0
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
0.0
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
0.0
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
0.0
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
0.0
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
0.0
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
0.0
Show allShow less
RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0026410003
Tumor
N/A
CPT0002370001
Normal
N/A
CPT0000790001
Normal
N/A
CPT0019130003
Tumor
N/A
CPT0088570001
Normal
N/A
CPT0065820001
Normal
N/A
CPT0025880003
Tumor
N/A
CPT0076330003
Tumor
N/A
CPT0001180009
Tumor
N/A
CPT0078800003
Tumor
N/A
CPT0078660003
Tumor
N/A
CPT0065690003
Tumor
N/A
CPT0078930003
Tumor
N/A
CPT0011240003
Tumor
N/A
CPT0084560003
Tumor
N/A
CPT0012670003
Tumor
N/A
CPT0002350011
Tumor
N/A
CPT0012920003
Normal
N/A
CPT0064370003
Tumor
N/A
CPT0088900003
Tumor
N/A
CPT0006730001
Normal
N/A
CPT0007870001
Normal
N/A
CPT0087040003
Tumor
N/A
CPT0079380003
Tumor
N/A
CPT0025170003
Tumor
N/A
CPT0024670003
Tumor
N/A
CPT0012640003
Normal
N/A
CPT0078830003
Tumor
N/A
CPT0021240003
Tumor
N/A
CPT0071150004
Tumor
N/A
CPT0089020003
Tumor
N/A
CPT0088970003
Tumor
N/A
CPT0066480003
Tumor
N/A
CPT0000870016
Tumor
N/A
CPT0092790003
Tumor
N/A
CPT0025610001
Normal
N/A
CPT0063330001
Normal
N/A
CPT0001350001
Normal
N/A
CPT0078940001
Normal
N/A
CPT0086830003
Normal
N/A
CPT0088760003
Tumor
N/A
CPT0092190003
Normal
N/A
CPT0002270011
Tumor
N/A
CPT0088550004
Tumor
N/A
CPT0023710001
Normal
N/A
CPT0077140001
Normal
N/A
CPT0025230003
Tumor
N/A
CPT0025050003
Tumor
N/A
CPT0075720003
Tumor
N/A
CPT0012570003
Normal
N/A
CPT0089040001
Normal
N/A
CPT0017850003
Tumor
N/A
CPT0019990003
Tumor
N/A
CPT0012900004
Tumor
N/A
CPT0000780007
Tumor
N/A
CPT0023360001
Normal
N/A
CPT0001510001
Normal
N/A
CPT0078840001
Normal
N/A
CPT0010110003
Tumor
N/A
CPT0086890003
Normal
N/A
CPT0092290003
Tumor
N/A
CPT0020120003
Tumor
N/A
CPT0088640003
Normal
N/A
CPT0088500001
Normal
N/A
CPT0069010001
Normal
N/A
CPT0006440003
Tumor
N/A
CPT0063630003
Tumor
N/A
CPT0001550001
Normal
N/A
CPT0086950003
Tumor
N/A
CPT0014350001
Normal
N/A
CPT0014470001
Normal
N/A
CPT0086360003
Tumor
N/A
CPT0069160003
Tumor
N/A
CPT0006950001
Normal
N/A
CPT0007860003
Tumor
N/A
CPT0082010001
Normal
N/A
CPT0079230003
Tumor
N/A
CPT0001340003
Tumor
N/A
CPT0011410003
Tumor
N/A
CPT0079180003
Tumor
N/A
CPT0012080003
Tumor
N/A
CPT0084590001
Normal
N/A
CPT0063640001
Normal
N/A
CPT0009000003
Tumor
N/A
CPT0010170001
Normal
N/A
CPT0079270003
Tumor
N/A
CPT0069190001
Normal
N/A
CPT0001270001
Normal
N/A
CPT0015810003
Tumor
N/A
CPT0025110003
Tumor
N/A
CPT0024680001
Normal
N/A
CPT0012090003
Normal
N/A
CPT0009020003
Normal
N/A
CPT0077310003
Tumor
N/A
CPT0077490003
Tumor
N/A
CPT0014160003
Tumor
N/A
CPT0078530001
Normal
N/A
CPT0020020001
Normal
N/A
CPT0066520001
Normal
N/A
CPT0014370004
Tumor
N/A
CPT0001500009
Tumor
N/A
CPT0081600003
Tumor
N/A
CPT0001190001
Normal
N/A
CPT0088630003
Tumor
N/A
CPT0069000003
Tumor
N/A
CPT0088710001
Normal
N/A
CPT0092160003
Tumor
N/A
CPT0006630003
Tumor
N/A
CPT0001260009
Tumor
N/A
CPT0065750003
Tumor
N/A
CPT0065930003
Tumor
N/A
CPT0012770003
Normal
N/A
CPT0012180003
Tumor
N/A
CPT0017410003
Tumor
N/A
CPT0023350003
Tumor
N/A
CPT0075570001
Normal
N/A
CPT0014130001
Normal
N/A
CPT0078510003
Tumor
N/A
CPT0066470004
Tumor
N/A
CPT0065450001
Normal
N/A
CPT0079000001
Normal
N/A
CPT0092800003
Normal
N/A
CPT0006900003
Tumor
N/A
CPT0015910003
Tumor
N/A
CPT0020130001
Normal
N/A
CPT0089480003
Normal
N/A
CPT0007470001
Normal
N/A
CPT0064400001
Normal
N/A
CPT0088920001
Normal
N/A
CPT0092730003
Tumor
N/A
CPT0077110003
Tumor
N/A
CPT0086030003
Tumor
N/A
CPT0025290003
Tumor
N/A
CPT0012550003
Tumor
N/A
CPT0018250001
Normal
N/A
CPT0017450001
Normal
N/A
CPT0077320001
Normal
N/A
CPT0077500001
Normal
N/A
CPT0092310003
Normal
N/A
CPT0079480003
Tumor
N/A
CPT0006530001
Normal
N/A
CPT0065430003
Tumor
N/A
CPT0019160001
Normal
N/A
CPT0081620001
Normal
N/A
CPT0063320003
Tumor
N/A
CPT0078670001
Normal
N/A
CPT0089460004
Tumor
N/A
CPT0007320003
Tumor
N/A
CPT0088690003
Tumor
N/A
CPT0010160003
Tumor
N/A
CPT0014450004
Tumor
N/A
CPT0025920001
Normal
N/A
CPT0076350001
Normal
N/A
CPT0015730003
Tumor
N/A
CPT0025350003
Tumor
N/A
CPT0012370003
Tumor
N/A
CPT0012280003
Tumor
N/A
CPT0009080003
Normal
N/A
CPT0079410003
Tumor
N/A
CPT0075560003
Tumor
N/A
CPT0001230001
Normal
N/A
CPT0079510001
Normal
N/A
CPT0066430001
Normal
N/A
CPT0001540009
Tumor
N/A
CPT0078990003
Tumor
N/A
CPT0065810003
Tumor
N/A
CPT0010120001
Normal
N/A
CPT0086870003
Tumor
N/A
CPT0075170001
Normal
N/A
CPT0000640003
Tumor
N/A
CPT0065870003
Tumor
N/A
CPT0088780001
Normal
N/A
CPT0086970003
Normal
N/A
CPT0079300001
Normal
N/A
CPT0092740003
Normal
N/A
CPT0085670003
Tumor
N/A
CPT0081880003
Tumor
N/A
CPT0013790003
Normal
N/A
CPT0012290003
Normal
N/A
CPT0087050003
Normal
N/A
CPT0009060003
Tumor
N/A
CPT0023690003
Tumor
N/A
CPT0001220008
Tumor
N/A
CPT0088480003
Tumor
N/A
CPT0026420001
Normal
N/A
CPT0079430001
Normal
N/A
CPT0000890001
Normal
N/A
CPT0086370003
Normal
N/A
CPT0025580004
Tumor
N/A
CPT0081990003
Tumor
N/A
CPT0025060001
Normal
N/A
CPT0075130003
Tumor
N/A
CPT0000660001
Normal
N/A
CPT0086820003
Tumor
N/A
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
