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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
S100A9 is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
14.8
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
147.7
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
106.9
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
75.6
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
65.4
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
40.1
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
32.8
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
27.9
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
24.8
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
21.9
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
21.9
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
18.8
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
17.9
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
15.7
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
15.2
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
14.0
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
13.8
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
12.9
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
12.1
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
11.9
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
11.5
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
11.3
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
11.2
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
10.7
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
10.2
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
9.9
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
9.1
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
8.5
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
8.5
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
8.5
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
8.4
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
8.0
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
7.9
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
7.4
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
7.1
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
6.8
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
6.4
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
6.3
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
5.9
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
5.9
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
5.8
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
5.5
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
5.5
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
5.3
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
5.2
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
5.2
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
5.1
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
4.8
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
4.8
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
4.8
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
4.3
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
4.3
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
3.7
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
3.6
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
3.4
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
3.3
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
3.2
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
1.7
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
1.3
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
1.2
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
0.3
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
0.0
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
0.0
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
0.0
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
S100A9 is not prognostic in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
64.4
Number of samples
521
Samples
Sample
Description
TPM
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
881.0
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
727.2
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
636.3
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
535.9
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
423.4
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
347.5
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
308.0
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
298.4
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
292.2
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
280.3
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
271.5
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
250.6
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
246.5
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
232.0
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
219.5
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
215.1
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
209.0
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
196.2
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
189.3
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
185.3
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
184.1
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
184.0
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
183.3
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
174.7
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
174.4
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
165.1
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
161.2
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
160.4
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
159.3
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
157.9
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
157.7
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
156.7
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
152.6
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
152.5
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
147.9
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
147.7
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
147.6
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
147.4
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
147.3
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
147.3
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
145.8
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
142.3
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
142.0
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
140.3
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
137.8
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
137.1
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
135.8
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
134.5
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
133.2
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
132.7
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
132.2
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
131.6
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
129.3
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
127.5
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
126.9
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
126.7
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
124.2
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
124.1
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
122.7
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
122.3
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
120.6
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
119.5
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
118.8
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
114.0
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
113.4
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
113.0
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
112.6
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
111.9
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
111.8
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
111.5
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
111.0
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
110.7
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
110.0
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
109.1
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
108.7
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
107.8
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
106.7
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
106.6
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
106.2
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
106.2
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
105.9
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
105.2
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
104.0
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
103.9
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
102.9
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
102.8
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
102.0
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
101.2
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
101.1
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
100.1
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
99.2
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
97.5
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
97.0
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
96.3
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
95.4
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
95.2
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
94.5
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
92.9
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
91.8
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
90.8
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
90.7
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
90.6
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
89.6
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
88.0
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
87.5
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
87.2
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
87.0
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
86.7
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
86.5
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
85.8
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
85.6
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
84.7
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
84.6
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
84.5
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
83.9
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
83.8
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
83.7
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
83.3
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
81.5
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
81.0
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
80.8
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
80.5
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
80.3
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
80.1
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
80.1
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
80.0
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
79.3
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
78.1
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
77.5
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
76.9
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
76.6
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
76.5
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
76.2
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
75.9
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
75.5
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
75.1
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
75.0
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
74.1
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
73.6
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
73.5
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
73.5
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
73.2
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
73.0
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
72.7
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
72.2
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
71.7
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
71.3
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
71.1
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
71.0
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
70.6
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
70.0
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
69.7
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
69.4
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
69.1
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
69.0
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
68.9
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
68.4
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
68.3
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
68.2
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
67.7
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
67.1
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
66.1
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
66.1
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
66.1
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
66.0
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
65.3
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
65.2
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
65.1
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
64.6
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
64.4
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
64.1
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
64.1
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
64.0
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
64.0
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
63.8
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
63.8
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
63.7
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
62.9
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
62.7
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
62.3
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
62.2
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
61.8
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
61.3
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
61.1
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
61.1
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
60.9
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
60.8
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
60.6
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
60.4
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
60.3
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
60.0
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
59.6
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
59.5
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
59.0
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
58.8
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
58.0
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
57.6
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
57.6
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
57.5
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
57.4
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
57.4
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
57.2
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
57.2
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
57.2
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
57.1
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
56.1
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
56.0
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
55.9
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
55.6
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
55.5
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
55.1
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
55.1
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
54.6
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
54.4
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
54.4
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
54.2
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
54.1
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
53.9
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
53.6
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
53.4
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
53.2
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
52.7
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
52.6
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
52.5
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
52.3
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
52.2
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
51.7
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
51.6
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
51.0
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
51.0
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
50.5
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
50.4
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
50.0
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
49.9
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
49.5
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
49.3
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
49.0
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
48.6
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
48.4
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
48.0
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
47.6
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
47.4
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
47.3
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
47.1
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
46.9
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
46.9
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
46.6
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
46.4
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
46.3
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
45.8
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
45.7
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
45.6
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
45.5
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
45.4
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
45.4
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
45.3
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
45.1
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
45.1
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
45.0
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
44.7
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
44.4
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
44.2
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
44.0
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
43.6
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
43.5
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
43.4
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
43.3
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
43.2
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
43.2
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
43.0
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
43.0
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
42.9
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
42.4
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
42.4
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
42.3
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
41.5
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
41.4
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
41.3
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
41.3
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
41.0
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
40.8
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
40.6
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
40.5
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
40.2
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
40.2
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
40.1
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
40.1
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
39.8
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
39.7
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
39.5
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
39.4
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
39.2
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
39.1
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
39.1
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
38.9
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
38.7
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
38.6
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
38.4
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
38.3
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
38.3
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
38.3
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
38.2
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
37.6
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
37.4
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
37.3
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
37.3
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
36.8
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
36.8
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
36.4
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
36.2
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
36.1
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
36.0
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
35.9
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
35.9
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
35.6
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
35.1
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
35.0
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
34.8
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
34.6
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
34.6
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
34.5
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
34.5
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
34.4
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
34.4
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
34.2
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
34.0
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
33.8
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
33.5
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
33.5
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
33.5
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
33.4
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
33.0
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
33.0
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
33.0
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
32.8
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
32.4
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
31.9
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
31.7
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
31.5
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
31.5
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
31.4
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
31.4
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
31.2
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
31.1
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
31.0
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
30.7
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
30.7
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
30.7
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
30.7
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
30.4
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
30.1
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
30.0
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
29.8
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
29.8
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
29.6
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
29.6
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
29.5
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
29.4
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
29.3
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
29.3
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
29.0
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
28.8
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
28.3
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
28.0
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
27.8
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
27.6
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
27.4
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
27.4
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
27.4
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
27.2
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
27.0
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
26.8
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
26.4
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
26.3
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
26.3
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
26.3
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
26.3
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
26.3
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
26.3
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
26.3
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
26.2
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
26.2
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
26.1
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
26.1
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
26.0
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
26.0
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
25.9
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
25.8
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
25.6
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
25.3
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
25.3
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
25.1
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
24.8
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
24.6
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
24.6
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
24.5
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
24.4
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
24.3
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
24.0
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
23.9
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
23.9
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
23.8
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
23.7
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
23.5
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
23.4
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
22.9
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
22.7
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
22.7
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
22.6
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
22.5
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
22.1
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
21.8
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
21.7
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
21.5
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
21.5
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
21.2
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
21.2
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
21.1
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
20.4
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
20.4
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
20.0
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
19.9
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
19.7
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
19.5
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
19.1
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
19.0
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
19.0
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
18.7
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
18.7
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
18.7
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
18.6
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
18.6
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
18.4
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
18.2
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
18.1
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
18.0
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
17.6
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
17.5
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
17.1
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
17.1
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
16.8
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
16.2
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
16.1
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
16.0
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
16.0
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
15.7
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
15.7
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
15.7
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
15.6
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
15.5
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
15.4
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
15.0
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
14.8
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
14.7
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
14.6
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
14.6
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
14.5
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
14.5
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
14.4
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
14.4
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
14.3
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
14.2
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
14.1
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
13.8
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
13.7
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
13.7
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
13.5
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
13.4
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
13.4
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
12.8
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
12.8
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
12.6
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
12.5
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
12.5
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
12.5
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
12.4
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
12.4
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
11.9
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
11.3
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
11.3
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
11.3
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
11.1
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
11.1
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
10.7
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
10.6
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
10.4
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
10.4
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
10.0
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
9.9
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
9.9
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
9.6
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
9.6
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
9.5
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
9.2
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
9.1
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
8.7
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
8.2
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
8.0
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
7.5
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
7.2
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
7.2
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
7.1
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
6.7
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
6.7
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
6.3
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
5.8
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
5.8
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
4.6
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
4.5
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
4.4
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
4.3
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
4.2
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
4.1
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
3.7
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
3.3
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
3.2
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
3.1
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
2.7
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
1.6
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
1.6
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
S100A9 is not prognostic in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
80.2
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
776.5
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
386.2
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
361.2
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
317.9
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
259.7
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
227.3
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
205.5
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
174.0
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
172.9
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
150.2
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
147.6
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
145.3
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
137.7
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
132.8
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
125.3
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
123.5
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
109.3
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
108.0
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
107.7
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
107.5
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
103.3
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
103.1
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
102.1
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
100.0
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
98.7
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
98.3
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
97.8
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
96.2
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
92.9
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
89.1
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
88.1
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
87.4
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
85.0
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
83.5
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
80.0
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
79.3
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
71.9
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
71.7
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
70.5
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
70.4
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
70.1
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
62.9
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
60.1
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
59.4
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
58.5
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
55.8
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
54.8
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
52.7
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
51.6
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
50.9
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
50.5
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
48.8
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
47.4
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
45.7
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
45.5
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
45.4
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
45.1
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
44.8
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
43.2
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
41.8
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
40.5
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
39.8
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
36.6
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
35.0
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
34.4
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
34.2
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
33.8
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
32.4
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
32.2
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
31.1
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
30.7
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
27.9
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
27.3
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
27.3
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
25.7
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
25.6
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
25.4
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
25.4
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
24.9
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
24.7
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
23.3
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
23.1
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
22.6
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
20.6
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
20.3
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
20.0
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
19.9
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
19.3
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
18.3
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
18.0
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
17.3
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
16.0
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
15.6
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
15.6
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
13.9
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
10.6
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
10.6
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
10.1
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
6.7
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
S100A9 is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
204.5
Number of samples
282
Samples
Sample
Description
TPM
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
38654.1
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
3170.8
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
2586.0
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
972.1
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
307.7
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
273.6
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
234.6
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
233.2
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
193.7
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
188.2
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
183.3
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
169.2
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
158.8
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
157.3
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
156.1
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
152.6
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
148.0
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
146.6
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
146.5
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
144.5
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
140.2
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
132.2
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
120.1
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
117.4
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
113.3
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
113.2
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
111.9
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
110.5
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
108.5
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
107.5
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
100.1
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
99.7
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
96.1
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
94.7
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
92.6
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
91.7
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
91.5
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
91.5
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
90.5
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
90.0
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
89.3
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
88.8
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
88.7
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
82.8
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
81.3
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
81.1
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
81.1
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
80.6
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
80.5
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
79.6
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
78.1
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
77.8
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
77.0
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
76.9
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
76.6
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
76.1
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
76.0
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
75.7
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
75.4
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
75.2
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
74.3
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
73.0
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
72.3
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
71.1
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
70.4
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
69.8
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
69.8
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
69.5
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
68.5
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
68.5
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
65.7
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
61.9
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
60.8
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
60.8
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
60.7
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
58.8
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
58.7
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
58.2
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
58.2
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
57.2
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
57.2
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
57.2
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
56.3
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
55.8
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
55.3
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
54.6
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
53.6
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
52.7
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
51.6
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
49.9
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
49.9
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
49.6
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
49.5
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
48.3
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
47.6
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
47.4
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
47.4
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
46.7
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
46.1
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
45.3
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
45.0
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
44.7
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
43.7
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
43.5
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
42.7
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
42.4
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
41.9
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
41.5
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
40.8
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
40.7
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
40.7
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
38.8
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
36.9
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
36.8
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
36.6
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
36.6
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
36.6
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
35.8
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
35.1
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
35.0
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
35.0
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
33.7
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
33.6
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
33.0
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
32.7
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
32.7
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
32.2
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
32.0
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
31.4
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
31.2
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
30.6
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
30.4
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
30.3
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
30.1
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
29.9
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
29.8
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
28.8
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
28.5
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
28.0
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
28.0
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
27.9
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
27.8
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
27.8
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
27.7
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
27.5
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
27.4
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
27.0
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
26.7
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
26.5
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
26.5
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
26.4
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
26.3
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
26.1
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
25.9
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
25.8
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
25.6
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
25.2
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
24.8
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
24.7
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
24.1
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
24.1
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
23.8
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
23.8
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
23.5
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
23.3
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
22.7
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
21.9
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
21.8
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
21.3
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
20.6
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
20.4
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
19.0
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
19.0
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
18.4
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
18.3
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
18.2
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
17.9
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
17.8
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
17.7
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
17.1
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
17.1
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
16.6
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
16.4
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
16.3
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
16.2
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
16.1
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
15.8
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
15.7
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
15.7
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
15.7
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
15.6
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
15.5
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
15.1
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
15.1
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
15.0
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
15.0
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
15.0
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
14.9
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
14.6
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
14.5
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
14.3
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
14.3
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
14.3
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
14.1
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
14.1
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
13.9
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
13.8
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
13.7
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
13.6
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
13.2
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
13.2
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
13.1
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
13.0
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
13.0
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
12.8
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
12.5
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
12.4
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
12.4
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
12.3
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
11.7
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
11.3
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
11.2
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
11.0
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
11.0
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
10.9
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
10.8
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
10.3
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
10.3
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
9.6
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
9.6
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
9.5
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
9.4
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
9.3
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
9.3
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
9.2
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
8.7
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
8.5
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
8.5
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
8.0
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
8.0
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
7.9
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
7.8
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
7.6
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
7.3
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
7.3
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
7.2
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
7.0
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
6.9
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
6.7
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
6.5
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
6.0
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
5.6
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
4.9
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
4.7
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
4.7
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
4.6
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
4.3
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
4.1
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
3.8
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
2.3
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
2.3
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
2.0
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
1.8
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
1.0
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
0.6
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
0.0
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
0.0
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
0.0
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
0.0
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
0.0
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
0.0
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
0.0
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
0.0
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
0.0
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
0.0
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
0.0
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
0.0
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
0.0
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
0.0
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
0.0
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
0.0
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
0.0
Show allShow less
RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0076330003
Tumor
4.0
CPT0017850003
Tumor
3.0
CPT0081880003
Tumor
2.8
CPT0092290003
Tumor
2.1
CPT0063630003
Tumor
2.0
CPT0023350003
Tumor
1.9
CPT0015730003
Tumor
1.8
CPT0002350011
Tumor
1.8
CPT0007860003
Tumor
1.4
CPT0025050003
Tumor
1.3
CPT0079410003
Tumor
1.2
CPT0001540009
Tumor
1.2
CPT0006630003
Tumor
1.2
CPT0064370003
Tumor
1.1
CPT0084560003
Tumor
1.0
CPT0066470004
Tumor
1.0
CPT0014370004
Tumor
1.0
CPT0086950003
Tumor
0.9
CPT0001220008
Tumor
0.9
CPT0025580004
Tumor
0.9
CPT0077310003
Tumor
0.8
CPT0079480003
Tumor
0.8
CPT0000870016
Tumor
0.8
CPT0069160003
Tumor
0.8
CPT0014160003
Tumor
0.7
CPT0010160003
Tumor
0.7
CPT0025290003
Tumor
0.7
CPT0086870003
Tumor
0.7
CPT0071150004
Tumor
0.6
CPT0020120003
Tumor
0.6
CPT0025170003
Tumor
0.6
CPT0024670003
Tumor
0.5
CPT0019990003
Tumor
0.5
CPT0023690003
Tumor
0.4
CPT0086030003
Tumor
0.4
CPT0077320001
Normal
0.4
CPT0065930003
Tumor
0.4
CPT0079230003
Tumor
0.4
CPT0063320003
Tumor
0.4
CPT0009000003
Tumor
0.3
CPT0086970003
Normal
0.2
CPT0001180009
Tumor
0.2
CPT0001260009
Tumor
0.2
CPT0010110003
Tumor
0.2
CPT0079380003
Tumor
0.2
CPT0087040003
Tumor
0.2
CPT0014450004
Tumor
0.1
CPT0001500009
Tumor
0.1
CPT0078510003
Tumor
0.1
CPT0089460004
Tumor
0.1
CPT0002270011
Tumor
0.0
CPT0092160003
Tumor
0.0
CPT0017410003
Tumor
0.0
CPT0001550001
Normal
0.0
CPT0087050003
Normal
0.0
CPT0025350003
Tumor
0.0
CPT0092790003
Tumor
-0.1
CPT0065750003
Tumor
-0.1
CPT0086820003
Tumor
-0.1
CPT0007470001
Normal
-0.1
CPT0015810003
Tumor
-0.1
CPT0065870003
Tumor
-0.1
CPT0006440003
Tumor
-0.1
CPT0084590001
Normal
-0.1
CPT0075560003
Tumor
-0.1
CPT0001350001
Normal
-0.1
CPT0065430003
Tumor
-0.2
CPT0065690003
Tumor
-0.2
CPT0012180003
Tumor
-0.2
CPT0092730003
Tumor
-0.2
CPT0077500001
Normal
-0.2
CPT0079270003
Tumor
-0.2
CPT0078990003
Tumor
-0.2
CPT0024680001
Normal
-0.2
CPT0066480003
Tumor
-0.2
CPT0007320003
Tumor
-0.2
CPT0010120001
Normal
-0.3
CPT0006900003
Tumor
-0.3
CPT0076350001
Normal
-0.3
CPT0026410003
Tumor
-0.3
CPT0000640003
Tumor
-0.3
CPT0078830003
Tumor
-0.3
CPT0092190003
Normal
-0.3
CPT0019130003
Tumor
-0.4
CPT0066520001
Normal
-0.4
CPT0078800003
Tumor
-0.4
CPT0023360001
Normal
-0.4
CPT0088570001
Normal
-0.4
CPT0025060001
Normal
-0.4
CPT0075170001
Normal
-0.4
CPT0075720003
Tumor
-0.4
CPT0000780007
Tumor
-0.4
CPT0075570001
Normal
-0.4
CPT0025110003
Tumor
-0.5
CPT0013790003
Normal
-0.5
CPT0001340003
Tumor
-0.5
CPT0065810003
Tumor
-0.5
CPT0012370003
Tumor
-0.5
CPT0000790001
Normal
-0.5
CPT0012670003
Tumor
-0.5
CPT0086360003
Tumor
-0.5
CPT0025880003
Tumor
-0.5
CPT0012280003
Tumor
-0.6
CPT0012290003
Normal
-0.6
CPT0077110003
Tumor
-0.6
CPT0012090003
Normal
-0.6
CPT0081600003
Tumor
-0.6
CPT0014130001
Normal
-0.6
CPT0065450001
Normal
-0.6
CPT0069010001
Normal
-0.6
CPT0065820001
Normal
-0.6
CPT0077490003
Tumor
-0.6
CPT0012080003
Tumor
-0.6
CPT0025230003
Tumor
-0.6
CPT0018250001
Normal
-0.7
CPT0021240003
Tumor
-0.7
CPT0092800003
Normal
-0.7
CPT0069000003
Tumor
-0.7
CPT0088710001
Normal
-0.7
CPT0088780001
Normal
-0.7
CPT0079510001
Normal
-0.7
CPT0001270001
Normal
-0.8
CPT0012900004
Tumor
-0.8
CPT0092310003
Normal
-0.8
CPT0088760003
Tumor
-0.8
CPT0025610001
Normal
-0.9
CPT0001230001
Normal
-0.9
CPT0001510001
Normal
-0.9
CPT0063330001
Normal
-0.9
CPT0088630003
Tumor
-0.9
CPT0075130003
Tumor
-0.9
CPT0081990003
Tumor
-0.9
CPT0077140001
Normal
-0.9
CPT0015910003
Tumor
-1.0
CPT0089480003
Normal
-1.0
CPT0019160001
Normal
-1.0
CPT0006530001
Normal
-1.0
CPT0012640003
Normal
-1.0
CPT0078840001
Normal
-1.0
CPT0012550003
Tumor
-1.0
CPT0088690003
Tumor
-1.0
CPT0002370001
Normal
-1.0
CPT0014350001
Normal
-1.0
CPT0079180003
Tumor
-1.1
CPT0014470001
Normal
-1.1
CPT0000890001
Normal
-1.1
CPT0078930003
Tumor
-1.1
CPT0088920001
Normal
-1.1
CPT0009020003
Normal
-1.1
CPT0085670003
Tumor
-1.1
CPT0079430001
Normal
-1.1
CPT0079300001
Normal
-1.1
CPT0088550004
Tumor
-1.1
CPT0066430001
Normal
-1.1
CPT0069190001
Normal
-1.1
CPT0000660001
Normal
-1.1
CPT0023710001
Normal
-1.1
CPT0063640001
Normal
-1.2
CPT0011410003
Tumor
-1.2
CPT0012570003
Normal
-1.2
CPT0001190001
Normal
-1.2
CPT0086830003
Normal
-1.2
CPT0078530001
Normal
-1.2
CPT0011240003
Tumor
-1.2
CPT0088970003
Tumor
-1.2
CPT0006950001
Normal
-1.2
CPT0081620001
Normal
-1.3
CPT0089020003
Tumor
-1.3
CPT0088640003
Normal
-1.3
CPT0086370003
Normal
-1.3
CPT0088480003
Tumor
-1.3
CPT0064400001
Normal
-1.3
CPT0012920003
Normal
-1.4
CPT0026420001
Normal
-1.4
CPT0020020001
Normal
-1.4
CPT0017450001
Normal
-1.4
CPT0007870001
Normal
-1.4
CPT0006730001
Normal
-1.5
CPT0089040001
Normal
-1.5
CPT0088900003
Tumor
-1.5
CPT0025920001
Normal
-1.6
CPT0010170001
Normal
-1.6
CPT0092740003
Normal
-1.6
CPT0009060003
Tumor
-1.7
CPT0020130001
Normal
-1.7
CPT0086890003
Normal
-1.7
CPT0079000001
Normal
-1.8
CPT0082010001
Normal
-1.8
CPT0009080003
Normal
-2.0
CPT0078670001
Normal
-2.0
CPT0078660003
Tumor
-2.0
CPT0012770003
Normal
-2.0
CPT0078940001
Normal
-2.1
CPT0088500001
Normal
-2.1
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
