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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
77.9
nTPM
HPA Brain:
29.8
nTPM
GTEx:
77.9
nTPM
FANTOM5:
127.2
Scaled Tags Per Million
Pig:
12.6
nTPM
Mouse:
30.2
nTPM
Allen mouse:
1.6
Expression energy
AMYGDALA - HPA Brain RNA-seq
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
29.8
Sample id
Sample description
nTPM
Amygdala nTPM: 29.8
2695
Female, age 67, right hemisphere
46.1
1987
Female, age 91, left hemisphere
29.4
2814
Male, age 76, right hemisphere
27.7
2514
Male, age 75, right hemisphere
26.8
2517
Female, age 94, left hemisphere
19.0
Basal amygdala nTPM: 18.9
2110
Male, age 80, left hemisphere
26.5
1955
Male, age 76, both hemispheres
22.8
2827
Female, age 67, right hemisphere
18.4
2243
Female, age 91, right hemisphere
17.5
2609
Male, age 75, right hemisphere
14.7
2685
Female, age 94, left hemisphere
13.3
Central amygdala nTPM: 21.8
1905
Male, age 76, both hemispheres
24.8
2515
Male, age 75, right hemisphere
23.3
2826
Female, age 94, left hemisphere
20.9
2239
Male, age 80, left hemisphere
20.1
2701
Female, age 91, right hemisphere
20.1
Corticomedial amygdala nTPM: 20.0
2240
Male, age 76, both hemispheres
30.9
2242
Female, age 91, right hemisphere
24.0
2829
Male, age 80, left hemisphere
18.1
2428
Male, age 75, right hemisphere
16.5
2535
Female, age 67, right hemisphere
16.4
2429
Female, age 94, left hemisphere
14.0
Lateral amygdala nTPM: 20.4
2256
Male, age 80, left hemisphere
26.2
2830
Female, age 67, right hemisphere
24.1
1883
Male, age 76, both hemispheres
21.4
2534
Female, age 94, left hemisphere
21.0
2255
Female, age 91, right hemisphere
15.7
2516
Male, age 75, right hemisphere
13.7
AMYGDALA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
77.9
GTEx sample id
Sample description
nTPM
Brain - Amygdala Average nTPM: 77.9
Samples: 152
Max nTPM: 896.0
Min nTPM: 8.7
Std nTPM: 92.2
Median nTPM: 53.2
GTEX-X4EP-0011-R4B-SM-3P627
60-69 years, female
896.0
GTEX-1CB4J-0011-R4b-SM-9WG5P
60-69 years, male
468.1
GTEX-145MI-0011-R4b-SM-5PNZH
60-69 years, female
342.0
GTEX-15DDE-0011-R4b-SM-7KULI
50-59 years, female
309.7
GTEX-183WM-0011-R4a-SM-7LG6S
70-79 years, female
282.1
GTEX-1H1DG-0011-R4a-SM-CE6RQ
70-79 years, male
237.0
GTEX-WHSE-0011-R4A-SM-3P5ZN
20-29 years, male
228.7
GTEX-13OVJ-0011-R4b-SM-5P9H5
50-59 years, female
212.5
GTEX-X585-0011-R4B-SM-46MVH
50-59 years, male
201.3
GTEX-OHPN-0011-R4A-SM-2I5FD
60-69 years, female
187.0
GTEX-1JN6P-0011-R4a-SM-EZ6MS
60-69 years, male
173.9
GTEX-11TTK-0011-R4a-SM-DNZZU
60-69 years, female
157.7
GTEX-13N2G-0011-R4b-SM-5MR54
60-69 years, male
155.8
GTEX-14PN4-0011-R4a-SM-686ZT
50-59 years, male
155.2
GTEX-147GR-0011-R4a-SM-5S2V2
60-69 years, male
130.8
GTEX-13NYS-0011-R4b-SM-5MR3O
60-69 years, male
128.6
GTEX-1B996-0011-R4b-SM-9OSVO
60-69 years, male
127.2
GTEX-17EVQ-0011-R4b-SM-7LT94
70-79 years, male
126.0
GTEX-13SLW-0011-R4b-SM-5S2W2
70-79 years, male
123.8
GTEX-13N1W-0011-R4a-SM-5MR52
70-79 years, male
117.8
GTEX-13PVQ-0011-R4a-SM-5O9CT
50-59 years, male
116.6
GTEX-N7MT-0011-R4a-SM-2I3G9
60-69 years, female
114.9
GTEX-1F48J-0011-R4b-SM-9OSVX
50-59 years, female
112.8
GTEX-1HB9E-0011-R4b-SM-ARZLS
50-59 years, male
111.2
GTEX-12WSF-0011-R4b-SM-5HL88
70-79 years, male
108.3
GTEX-14BIM-0011-R4b-SM-5S2RK
60-69 years, female
108.1
GTEX-1H23P-0011-R4b-SM-CL54R
60-69 years, male
108.1
GTEX-1445S-0011-R4a-SM-5PNWN
60-69 years, male
106.1
GTEX-17F97-0011-R4b-SM-7KFS2
50-59 years, male
104.4
GTEX-NL4W-0011-R4a-SM-2I5GZ
50-59 years, male
104.4
GTEX-1ICLZ-0011-R4a-SM-CMKHL
60-69 years, male
102.8
GTEX-NPJ8-0011-R4a-SM-2HML3
40-49 years, male
100.3
GTEX-NPJ7-0011-R4a-SM-2I3GJ
60-69 years, female
99.2
GTEX-13X6I-0011-R4b-SM-5PNU9
60-69 years, male
96.6
GTEX-1H2FU-0011-R4a-SM-CL551
60-69 years, female
95.6
GTEX-1J1OQ-0011-R4a-SM-D4P2A
40-49 years, female
91.8
GTEX-13QIC-0011-R4a-SM-5PNX8
60-69 years, female
91.5
GTEX-13OW5-0011-R4b-SM-5L3HS
60-69 years, male
91.3
GTEX-14PQA-0011-R4b-SM-6AJBU
50-59 years, female
89.8
GTEX-1GF9W-0011-R4a-SM-CE6RH
60-69 years, male
85.1
GTEX-1A3MX-0011-R4b-SM-7EWFK
60-69 years, male
84.0
GTEX-13X6K-0011-R4b-SM-5P9HO
60-69 years, female
83.8
GTEX-1C6WA-0011-R4a-SM-9QEH2
60-69 years, male
82.3
GTEX-15CHQ-0011-R4a-SM-686ZX
60-69 years, male
82.1
GTEX-1GMR8-0011-R4a-SM-9OSX1
50-59 years, female
81.5
GTEX-139T8-0011-R4a-SM-5HL54
60-69 years, male
80.7
GTEX-1LSVX-0011-R4b-SM-EXURP
60-69 years, male
80.1
GTEX-1LVAO-0011-R4a-SM-EXURO
60-69 years, male
79.8
GTEX-15DCD-0011-R4a-SM-69LPB
70-79 years, female
77.8
GTEX-1N2DW-0011-R4b-SM-EZ6MD
50-59 years, male
77.4
GTEX-14E7W-0011-R4b-SM-62LEA
70-79 years, male
72.9
GTEX-1JJEA-0011-R4a-SM-EXUTC
60-69 years, male
72.5
GTEX-13JVG-0011-R4a-SM-5MR4C
60-69 years, male
71.9
GTEX-1399T-0011-R4b-SM-5DUVX
60-69 years, male
71.3
GTEX-T5JC-0011-R4A-SM-32PLT
20-29 years, male
71.0
GTEX-1H1CY-0011-R4b-SM-CJI3G
60-69 years, female
70.9
GTEX-1N2EE-0011-R4a-SM-EXOII
60-69 years, male
70.2
GTEX-12ZZZ-0011-R4b-SM-5DUV7
60-69 years, male
70.0
GTEX-ZE9C-0011-R4a-SM-4WKH6
60-69 years, male
69.7
GTEX-UTHO-0011-R4A-SM-3GIJP
60-69 years, male
68.1
GTEX-145LS-0011-R4b-SM-5S2UT
60-69 years, female
66.9
GTEX-14JFF-0011-R4a-SM-5ZZV5
60-69 years, male
63.8
GTEX-12WSH-0011-R4a-SM-5GU6K
50-59 years, male
63.7
GTEX-12WSA-0011-R4a-SM-57WB7
60-69 years, male
62.8
GTEX-1EX96-0011-R4a-SM-ARU82
50-59 years, male
62.7
GTEX-QVUS-0011-R4A-SM-3GAE7
60-69 years, female
62.1
GTEX-1GN73-0011-R4b-SM-9QEIK
60-69 years, male
59.7
GTEX-13CZV-0011-R4b-SM-5J2NY
60-69 years, male
58.7
GTEX-14DAQ-0011-R4a-SM-5YYAI
60-69 years, female
58.3
GTEX-X4XX-0011-R4B-SM-46MWL
60-69 years, male
56.9
GTEX-15EO6-0011-R4a-SM-7KUKZ
50-59 years, male
55.0
GTEX-13RTJ-0011-R4b-SM-5PNX1
60-69 years, male
54.9
GTEX-QMR6-0011-R4A-SM-32PKU
50-59 years, male
54.1
GTEX-1GZ4I-0011-R4a-SM-9QEI9
50-59 years, male
54.1
GTEX-1J8EW-0011-R4b-SM-ARU89
60-69 years, female
53.9
GTEX-1EMGI-0011-R4b-SM-CJI2D
60-69 years, male
53.4
GTEX-1H3O1-0011-R4b-SM-A9SKE
60-69 years, male
52.9
GTEX-1CB4G-0011-R4b-SM-CJI28
60-69 years, male
51.7
GTEX-1H3NZ-0011-R4a-SM-CL54T
60-69 years, male
51.6
GTEX-YFC4-0011-R4a-SM-4RGLQ
40-49 years, female
49.7
GTEX-13OVH-0011-R4a-SM-5KM3W
70-79 years, male
49.0
GTEX-11PRG-0011-R4a-SM-DNZZR
50-59 years, male
48.7
GTEX-Y8DK-0011-R4A-SM-EXUR1
60-69 years, male
47.9
GTEX-11ONC-0011-R4b-SM-DO93H
60-69 years, male
47.1
GTEX-1HBPI-0011-R4a-SM-CJI3K
50-59 years, male
45.5
GTEX-16YQH-0011-R4a-SM-7EPGI
30-39 years, male
45.3
GTEX-ZAK1-0011-R4a-SM-6AJBK
50-59 years, female
45.1
GTEX-144GL-0011-R4a-SM-5PNUI
50-59 years, male
44.7
GTEX-14ASI-0011-R4a-SM-69LQ4
60-69 years, male
43.8
GTEX-1HBPH-0011-R4a-SM-A96RX
40-49 years, female
43.7
GTEX-13OW8-0011-R4a-SM-9WG6V
60-69 years, male
43.6
GTEX-RNOR-0011-R4A-SM-3GAD3
50-59 years, female
43.2
GTEX-18464-0011-R4a-SM-7LG6T
50-59 years, male
42.7
GTEX-1E1VI-0011-R4b-SM-9QEHV
50-59 years, male
42.5
GTEX-QVJO-0011-R4A-SM-2S1QL
60-69 years, female
41.8
GTEX-NL3H-0011-R4a-SM-2I3GK
60-69 years, male
40.8
GTEX-13OW6-0011-R4a-SM-5O9DX
50-59 years, male
40.0
GTEX-P44H-0011-R4A-SM-2XCEW
40-49 years, male
39.9
GTEX-1IY9M-0011-R4a-SM-C1YQ2
60-69 years, male
39.2
GTEX-N7MS-0011-R4a-SM-2HMKW
60-69 years, male
38.3
GTEX-TSE9-0011-R4A-SM-3DB7H
60-69 years, female
37.9
GTEX-1JMQJ-0011-R4b-SM-EXUT8
50-59 years, male
37.7
GTEX-XLM4-0011-R4B-SM-4AT5C
60-69 years, male
37.3
GTEX-1HFI6-0011-R4b-SM-A96RT
40-49 years, male
36.8
GTEX-13OVL-0011-R4b-SM-5L3HV
50-59 years, male
36.6
GTEX-17HG3-0011-R4a-SM-7IGLL
30-39 years, female
36.6
GTEX-ZAB4-0011-R4a-SM-4SOKB
40-49 years, male
36.5
GTEX-1H1ZS-0011-R4b-SM-CKZO7
70-79 years, male
35.0
GTEX-13O3Q-0011-R4a-SM-5P9H2
50-59 years, male
34.8
GTEX-11ZVC-0011-R4a-SM-5BC6Z
50-59 years, female
34.7
GTEX-1C6VR-0011-R4b-SM-9QEGZ
60-69 years, male
34.7
GTEX-1AX9I-0011-R4b-SM-7EPIB
60-69 years, male
34.5
GTEX-1F6IF-0011-R4b-SM-CKZNJ
60-69 years, male
34.1
GTEX-1F7RK-0011-R4b-SM-9QEI7
20-29 years, female
34.0
GTEX-ZVZQ-0011-R4b-SM-57WCZ
60-69 years, female
33.4
GTEX-12ZZW-0011-R4a-SM-5DUX9
50-59 years, male
32.2
GTEX-13112-0011-R4b-SM-5DUXL
50-59 years, male
32.1
GTEX-13O3O-0011-R4b-SM-5KM3F
60-69 years, female
32.0
GTEX-T6MN-0011-R4A-SM-32QPG
50-59 years, male
31.4
GTEX-131YS-0011-R4a-SM-5DUVL
60-69 years, female
31.1
GTEX-1313W-0011-R4b-SM-5KLZV
50-59 years, female
31.0
GTEX-11NUK-0011-R4a-SM-DO12B
50-59 years, male
31.0
GTEX-15DYW-0011-R4a-SM-6M46V
60-69 years, female
30.6
GTEX-14PJM-0011-R4a-SM-5YYAS
50-59 years, female
29.9
GTEX-1I1GR-0011-R4a-SM-CMKHC
60-69 years, male
29.8
GTEX-13SLX-0011-R4a-SM-5O9BJ
50-59 years, female
29.7
GTEX-12WSD-0011-R4b-SM-5LZUA
60-69 years, female
29.5
GTEX-13X6J-0011-R4b-SM-5P9K4
50-59 years, male
29.1
GTEX-1HCU6-0011-R4b-SM-ARU74
60-69 years, female
28.2
GTEX-1B8L1-0011-R4a-SM-7EWFJ
60-69 years, male
27.8
GTEX-1J8Q2-0011-R4a-SM-ADEHA
60-69 years, male
27.8
GTEX-11ZU8-0011-R4a-SM-5BC6Y
60-69 years, male
27.6
GTEX-P44G-0011-R4A-SM-2I3FB
30-39 years, male
27.3
GTEX-R55E-0011-R4A-SM-2TC5H
20-29 years, male
27.3
GTEX-WVLH-0011-R4A-SM-3MJFS
50-59 years, male
27.3
GTEX-15ER7-0011-R4a-SM-6M46S
20-29 years, female
26.9
GTEX-14JIY-0011-R4b-SM-5ZZV7
60-69 years, male
26.5
GTEX-1GTWX-0011-R4a-SM-C1YQI
60-69 years, male
26.4
GTEX-13VXU-0011-R4b-SM-5O9CI
50-59 years, male
26.3
GTEX-14JG1-0011-R4b-SM-62LEB
40-49 years, male
26.1
GTEX-QDT8-0011-R4A-SM-32PKM
30-39 years, female
25.4
GTEX-13NYB-0011-R4b-SM-9QEGJ
40-49 years, male
25.1
GTEX-15SHU-0011-R4b-SM-7IGLC
40-49 years, female
24.9
GTEX-13OW7-0011-R4b-SM-5O9CX
50-59 years, male
24.7
GTEX-1F75A-0011-R4a-SM-ARL8J
50-59 years, male
23.1
GTEX-17EVP-0011-R4a-SM-79OML
40-49 years, male
22.4
GTEX-14ABY-0011-R4b-SM-5S2VN
50-59 years, male
22.2
GTEX-S7SE-0011-R4A-SM-2XCDB
50-59 years, male
20.8
GTEX-13FLV-0011-R4a-SM-5LZYU
50-59 years, male
18.1
GTEX-WZTO-0011-R4A-SM-3NMC7
40-49 years, male
15.1
GTEX-Q2AG-0011-R4A-SM-2HMKA
40-49 years, female
12.8
GTEX-131XH-0011-R4b-SM-5DUWB
50-59 years, male
8.7
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AMYGDALA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
30.2
Mouse sample
Sample description
nTPM
Amygdala nTPM: 30.2
Samples: 4
Max nTPM: 35.4
Min nTPM: 26.6
Sample A
Male
31.0
Sample B
Male
27.7
Sample C
Female
26.6
Sample D
Female
35.4
AMYGDALA - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
Max subtype Expression energyi
Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.