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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
210.2
nTPM
HPA Brain:
205.7
nTPM
GTEx:
210.2
nTPM
FANTOM5:
497.8
Scaled Tags Per Million
Pig:
188.5
nTPM
Mouse:
532.9
nTPM
Allen mouse:
5.7
Expression energy
AMYGDALA - Annotated protein expression
Pending normal tissue analysis
AMYGDALA - HPA Brain RNA-seq
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
205.7
Sample id
Sample description
nTPM
Amygdala nTPM: 176.6
2814
Male, age 76, right hemisphere
263.8
1987
Female, age 91, left hemisphere
217.5
2514
Male, age 75, right hemisphere
150.9
2517
Female, age 94, left hemisphere
136.7
2695
Female, age 67, right hemisphere
114.0
Basal amygdala nTPM: 200.5
2243
Female, age 91, right hemisphere
326.1
2110
Male, age 80, left hemisphere
217.0
2685
Female, age 94, left hemisphere
213.1
1955
Male, age 76, both hemispheres
180.8
2609
Male, age 75, right hemisphere
160.6
2827
Female, age 67, right hemisphere
105.6
Central amygdala nTPM: 205.7
2701
Female, age 91, right hemisphere
279.7
1905
Male, age 76, both hemispheres
212.7
2826
Female, age 94, left hemisphere
202.9
2239
Male, age 80, left hemisphere
202.6
2515
Male, age 75, right hemisphere
130.9
Corticomedial amygdala nTPM: 184.0
2829
Male, age 80, left hemisphere
244.7
2429
Female, age 94, left hemisphere
200.0
2428
Male, age 75, right hemisphere
173.1
2240
Male, age 76, both hemispheres
171.4
2242
Female, age 91, right hemisphere
162.7
2535
Female, age 67, right hemisphere
152.0
Lateral amygdala nTPM: 187.9
2534
Female, age 94, left hemisphere
304.1
2255
Female, age 91, right hemisphere
277.3
1883
Male, age 76, both hemispheres
201.1
2256
Male, age 80, left hemisphere
194.7
2516
Male, age 75, right hemisphere
77.3
2830
Female, age 67, right hemisphere
72.8
AMYGDALA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
210.2
GTEx sample id
Sample description
nTPM
Brain - Amygdala Average nTPM: 210.2
Samples: 152
Max nTPM: 737.9
Min nTPM: 9.0
Std nTPM: 143.1
Median nTPM: 187.1
GTEX-14JG1-0011-R4b-SM-62LEB
40-49 years, male
737.9
GTEX-WZTO-0011-R4A-SM-3NMC7
40-49 years, male
664.0
GTEX-1JMQJ-0011-R4b-SM-EXUT8
50-59 years, male
614.6
GTEX-1HCU6-0011-R4b-SM-ARU74
60-69 years, female
583.2
GTEX-14JIY-0011-R4b-SM-5ZZV7
60-69 years, male
541.2
GTEX-R55E-0011-R4A-SM-2TC5H
20-29 years, male
538.1
GTEX-1ICLZ-0011-R4a-SM-CMKHL
60-69 years, male
528.4
GTEX-16YQH-0011-R4a-SM-7EPGI
30-39 years, male
481.0
GTEX-TSE9-0011-R4A-SM-3DB7H
60-69 years, female
480.6
GTEX-1399T-0011-R4b-SM-5DUVX
60-69 years, male
444.4
GTEX-13VXU-0011-R4b-SM-5O9CI
50-59 years, male
416.3
GTEX-14E7W-0011-R4b-SM-62LEA
70-79 years, male
414.1
GTEX-1IY9M-0011-R4a-SM-C1YQ2
60-69 years, male
409.1
GTEX-15EO6-0011-R4a-SM-7KUKZ
50-59 years, male
405.8
GTEX-S7SE-0011-R4A-SM-2XCDB
50-59 years, male
403.8
GTEX-WVLH-0011-R4A-SM-3MJFS
50-59 years, male
394.0
GTEX-13112-0011-R4b-SM-5DUXL
50-59 years, male
391.0
GTEX-YFC4-0011-R4a-SM-4RGLQ
40-49 years, female
389.1
GTEX-1F75A-0011-R4a-SM-ARL8J
50-59 years, male
376.3
GTEX-14ASI-0011-R4a-SM-69LQ4
60-69 years, male
376.1
GTEX-131XH-0011-R4b-SM-5DUWB
50-59 years, male
363.0
GTEX-XLM4-0011-R4B-SM-4AT5C
60-69 years, male
360.3
GTEX-T5JC-0011-R4A-SM-32PLT
20-29 years, male
353.8
GTEX-13O3Q-0011-R4a-SM-5P9H2
50-59 years, male
346.9
GTEX-QVJO-0011-R4A-SM-2S1QL
60-69 years, female
345.9
GTEX-1HFI6-0011-R4b-SM-A96RT
40-49 years, male
344.8
GTEX-11NUK-0011-R4a-SM-DO12B
50-59 years, male
344.3
GTEX-1313W-0011-R4b-SM-5KLZV
50-59 years, female
338.8
GTEX-17EVP-0011-R4a-SM-79OML
40-49 years, male
330.2
GTEX-UTHO-0011-R4A-SM-3GIJP
60-69 years, male
329.1
GTEX-P44G-0011-R4A-SM-2I3FB
30-39 years, male
315.6
GTEX-1F48J-0011-R4b-SM-9OSVX
50-59 years, female
313.4
GTEX-131YS-0011-R4a-SM-5DUVL
60-69 years, female
312.5
GTEX-NPJ7-0011-R4a-SM-2I3GJ
60-69 years, female
311.5
GTEX-1LVAO-0011-R4a-SM-EXURO
60-69 years, male
303.6
GTEX-14BIM-0011-R4b-SM-5S2RK
60-69 years, female
302.0
GTEX-Q2AG-0011-R4A-SM-2HMKA
40-49 years, female
300.2
GTEX-11PRG-0011-R4a-SM-DNZZR
50-59 years, male
299.1
GTEX-RNOR-0011-R4A-SM-3GAD3
50-59 years, female
297.2
GTEX-12WSH-0011-R4a-SM-5GU6K
50-59 years, male
297.1
GTEX-1B8L1-0011-R4a-SM-7EWFJ
60-69 years, male
281.8
GTEX-1LSVX-0011-R4b-SM-EXURP
60-69 years, male
276.8
GTEX-13O3O-0011-R4b-SM-5KM3F
60-69 years, female
275.9
GTEX-15DYW-0011-R4a-SM-6M46V
60-69 years, female
274.6
GTEX-QMR6-0011-R4A-SM-32PKU
50-59 years, male
272.2
GTEX-15SHU-0011-R4b-SM-7IGLC
40-49 years, female
266.2
GTEX-1A3MX-0011-R4b-SM-7EWFK
60-69 years, male
261.9
GTEX-P44H-0011-R4A-SM-2XCEW
40-49 years, male
261.6
GTEX-QVUS-0011-R4A-SM-3GAE7
60-69 years, female
261.5
GTEX-1I1GR-0011-R4a-SM-CMKHC
60-69 years, male
260.2
GTEX-1HBPH-0011-R4a-SM-A96RX
40-49 years, female
253.8
GTEX-1C6WA-0011-R4a-SM-9QEH2
60-69 years, male
250.5
GTEX-1F7RK-0011-R4b-SM-9QEI7
20-29 years, female
246.8
GTEX-17HG3-0011-R4a-SM-7IGLL
30-39 years, female
244.8
GTEX-1AX9I-0011-R4b-SM-7EPIB
60-69 years, male
243.6
GTEX-1GMR8-0011-R4a-SM-9OSX1
50-59 years, female
240.8
GTEX-13X6J-0011-R4b-SM-5P9K4
50-59 years, male
240.7
GTEX-ZAB4-0011-R4a-SM-4SOKB
40-49 years, male
236.6
GTEX-ZVZQ-0011-R4b-SM-57WCZ
60-69 years, female
232.9
GTEX-13NYB-0011-R4b-SM-9QEGJ
40-49 years, male
232.8
GTEX-12WSF-0011-R4b-SM-5HL88
70-79 years, male
230.9
GTEX-1H3NZ-0011-R4a-SM-CL54T
60-69 years, male
230.2
GTEX-17EVQ-0011-R4b-SM-7LT94
70-79 years, male
224.1
GTEX-14ABY-0011-R4b-SM-5S2VN
50-59 years, male
215.6
GTEX-13X6K-0011-R4b-SM-5P9HO
60-69 years, female
214.4
GTEX-14PJM-0011-R4a-SM-5YYAS
50-59 years, female
212.3
GTEX-QDT8-0011-R4A-SM-32PKM
30-39 years, female
212.2
GTEX-X585-0011-R4B-SM-46MVH
50-59 years, male
208.6
GTEX-1CB4G-0011-R4b-SM-CJI28
60-69 years, male
208.5
GTEX-Y8DK-0011-R4A-SM-EXUR1
60-69 years, male
208.0
GTEX-13N1W-0011-R4a-SM-5MR52
70-79 years, male
203.0
GTEX-14DAQ-0011-R4a-SM-5YYAI
60-69 years, female
194.7
GTEX-13X6I-0011-R4b-SM-5PNU9
60-69 years, male
194.2
GTEX-NL3H-0011-R4a-SM-2I3GK
60-69 years, male
191.1
GTEX-1H1ZS-0011-R4b-SM-CKZO7
70-79 years, male
190.0
GTEX-NL4W-0011-R4a-SM-2I5GZ
50-59 years, male
189.9
GTEX-145LS-0011-R4b-SM-5S2UT
60-69 years, female
184.2
GTEX-1E1VI-0011-R4b-SM-9QEHV
50-59 years, male
182.1
GTEX-13N2G-0011-R4b-SM-5MR54
60-69 years, male
181.9
GTEX-1EMGI-0011-R4b-SM-CJI2D
60-69 years, male
179.3
GTEX-12WSD-0011-R4b-SM-5LZUA
60-69 years, female
173.7
GTEX-WHSE-0011-R4A-SM-3P5ZN
20-29 years, male
172.4
GTEX-1GF9W-0011-R4a-SM-CE6RH
60-69 years, male
168.7
GTEX-1GTWX-0011-R4a-SM-C1YQI
60-69 years, male
168.1
GTEX-N7MS-0011-R4a-SM-2HMKW
60-69 years, male
164.0
GTEX-14PQA-0011-R4b-SM-6AJBU
50-59 years, female
161.6
GTEX-15CHQ-0011-R4a-SM-686ZX
60-69 years, male
159.2
GTEX-X4XX-0011-R4B-SM-46MWL
60-69 years, male
158.5
GTEX-T6MN-0011-R4A-SM-32QPG
50-59 years, male
152.5
GTEX-ZAK1-0011-R4a-SM-6AJBK
50-59 years, female
146.2
GTEX-18464-0011-R4a-SM-7LG6T
50-59 years, male
144.9
GTEX-1GN73-0011-R4b-SM-9QEIK
60-69 years, male
144.5
GTEX-1F6IF-0011-R4b-SM-CKZNJ
60-69 years, male
144.3
GTEX-15ER7-0011-R4a-SM-6M46S
20-29 years, female
137.0
GTEX-1GZ4I-0011-R4a-SM-9QEI9
50-59 years, male
136.7
GTEX-17F97-0011-R4b-SM-7KFS2
50-59 years, male
134.7
GTEX-12ZZZ-0011-R4b-SM-5DUV7
60-69 years, male
127.4
GTEX-1H3O1-0011-R4b-SM-A9SKE
60-69 years, male
125.9
GTEX-13OVL-0011-R4b-SM-5L3HV
50-59 years, male
124.9
GTEX-1H1CY-0011-R4b-SM-CJI3G
60-69 years, female
123.4
GTEX-1HB9E-0011-R4b-SM-ARZLS
50-59 years, male
120.4
GTEX-13SLX-0011-R4a-SM-5O9BJ
50-59 years, female
119.5
GTEX-11ONC-0011-R4b-SM-DO93H
60-69 years, male
117.9
GTEX-14JFF-0011-R4a-SM-5ZZV5
60-69 years, male
117.3
GTEX-11TTK-0011-R4a-SM-DNZZU
60-69 years, female
109.9
GTEX-13OW6-0011-R4a-SM-5O9DX
50-59 years, male
108.1
GTEX-1N2DW-0011-R4b-SM-EZ6MD
50-59 years, male
106.9
GTEX-14PN4-0011-R4a-SM-686ZT
50-59 years, male
106.8
GTEX-1B996-0011-R4b-SM-9OSVO
60-69 years, male
103.3
GTEX-144GL-0011-R4a-SM-5PNUI
50-59 years, male
101.9
GTEX-13OW5-0011-R4b-SM-5L3HS
60-69 years, male
100.5
GTEX-1N2EE-0011-R4a-SM-EXOII
60-69 years, male
100.1
GTEX-13FLV-0011-R4a-SM-5LZYU
50-59 years, male
94.6
GTEX-1C6VR-0011-R4b-SM-9QEGZ
60-69 years, male
94.2
GTEX-147GR-0011-R4a-SM-5S2V2
60-69 years, male
92.4
GTEX-N7MT-0011-R4a-SM-2I3G9
60-69 years, female
90.9
GTEX-OHPN-0011-R4A-SM-2I5FD
60-69 years, female
86.9
GTEX-139T8-0011-R4a-SM-5HL54
60-69 years, male
83.2
GTEX-1HBPI-0011-R4a-SM-CJI3K
50-59 years, male
82.4
GTEX-13PVQ-0011-R4a-SM-5O9CT
50-59 years, male
81.5
GTEX-1J8Q2-0011-R4a-SM-ADEHA
60-69 years, male
81.1
GTEX-13OW7-0011-R4b-SM-5O9CX
50-59 years, male
80.1
GTEX-13RTJ-0011-R4b-SM-5PNX1
60-69 years, male
79.7
GTEX-NPJ8-0011-R4a-SM-2HML3
40-49 years, male
77.4
GTEX-1J1OQ-0011-R4a-SM-D4P2A
40-49 years, female
73.6
GTEX-1EX96-0011-R4a-SM-ARU82
50-59 years, male
72.5
GTEX-13OVJ-0011-R4b-SM-5P9H5
50-59 years, female
71.0
GTEX-13NYS-0011-R4b-SM-5MR3O
60-69 years, male
70.6
GTEX-13OVH-0011-R4a-SM-5KM3W
70-79 years, male
68.1
GTEX-12ZZW-0011-R4a-SM-5DUX9
50-59 years, male
68.0
GTEX-15DCD-0011-R4a-SM-69LPB
70-79 years, female
67.7
GTEX-13CZV-0011-R4b-SM-5J2NY
60-69 years, male
59.9
GTEX-1445S-0011-R4a-SM-5PNWN
60-69 years, male
58.2
GTEX-1JN6P-0011-R4a-SM-EZ6MS
60-69 years, male
57.4
GTEX-1H1DG-0011-R4a-SM-CE6RQ
70-79 years, male
56.2
GTEX-13OW8-0011-R4a-SM-9WG6V
60-69 years, male
55.1
GTEX-13JVG-0011-R4a-SM-5MR4C
60-69 years, male
54.6
GTEX-15DDE-0011-R4b-SM-7KULI
50-59 years, female
53.2
GTEX-1JJEA-0011-R4a-SM-EXUTC
60-69 years, male
52.8
GTEX-11ZU8-0011-R4a-SM-5BC6Y
60-69 years, male
52.4
GTEX-13QIC-0011-R4a-SM-5PNX8
60-69 years, female
50.5
GTEX-1H23P-0011-R4b-SM-CL54R
60-69 years, male
46.6
GTEX-12WSA-0011-R4a-SM-57WB7
60-69 years, male
40.2
GTEX-ZE9C-0011-R4a-SM-4WKH6
60-69 years, male
36.0
GTEX-1J8EW-0011-R4b-SM-ARU89
60-69 years, female
35.8
GTEX-11ZVC-0011-R4a-SM-5BC6Z
50-59 years, female
34.7
GTEX-13SLW-0011-R4b-SM-5S2W2
70-79 years, male
31.3
GTEX-145MI-0011-R4b-SM-5PNZH
60-69 years, female
30.1
GTEX-1H2FU-0011-R4a-SM-CL551
60-69 years, female
24.8
GTEX-1CB4J-0011-R4b-SM-9WG5P
60-69 years, male
20.6
GTEX-183WM-0011-R4a-SM-7LG6S
70-79 years, female
19.0
GTEX-X4EP-0011-R4B-SM-3P627
60-69 years, female
9.0
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AMYGDALA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
532.9
Mouse sample
Sample description
nTPM
Amygdala nTPM: 532.9
Samples: 4
Max nTPM: 565.9
Min nTPM: 495.9
Sample A
Male
565.9
Sample B
Male
537.0
Sample C
Female
532.6
Sample D
Female
495.9
AMYGDALA - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
Max subtype Expression energyi
Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.