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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
PEX13 is not prognostic in Liver Hepatocellular Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
8.0
Number of samples
362
Samples
Sample
Description
TPM
TCGA-G3-A7M9-01A
0 years, male, white, stage:Stage IIIB, dead, 56 days
22.2
TCGA-DD-A4NA-01A
0 years, female, white, stage:Stage IIIC, alive, 1008 days
19.3
TCGA-G3-AAV4-01A
0 years, female, white, stage:Stage I, dead, 27 days
18.4
TCGA-XR-A8TE-01A
0 years, male, white, stage:Stage IIIA, alive, 925 days
17.9
TCGA-DD-A73B-01A
0 years, female, white, stage:Stage I, dead, 283 days
17.7
TCGA-CC-A8HS-01A
0 years, male, asian, stage:Stage IIIC, dead, 300 days
17.4
TCGA-ED-A97K-01A
0 years, male, asian, stage:Stage IIIA, alive, 6 days
17.3
TCGA-CC-5263-01A
0 years, male, asian, stage:Stage IIIA, dead, 129 days
15.8
TCGA-DD-A4NH-01A
0 years, female, white, stage:Stage IIIB, alive, 917 days
15.5
TCGA-DD-A3A4-01A
0 years, male, white, stage:Stage IIIA, dead, 612 days
15.4
TCGA-DD-A11B-01A
0 years, male, white, stage:Stage I, dead, 14 days
15.3
TCGA-CC-5260-01A
0 years, female, asian, stage:Stage IIIC, dead, 87 days
14.6
TCGA-DD-A1EF-01A
0 years, female, white, stage:Stage I, dead, 394 days
14.5
TCGA-DD-AAVW-01A
0 years, male, asian, stage:Stage I, alive, 2317 days
14.0
TCGA-BC-A10W-01A
0 years, male, asian, stage:'--, dead, 91 days
14.0
TCGA-DD-A73E-01A
0 years, male, white, stage:Stage I, alive, 44 days
13.7
TCGA-BC-A10Q-01A
0 years, female, white, stage:'--, dead, 1135 days
13.5
TCGA-DD-A4NF-01A
0 years, male, white, stage:Stage I, alive, 942 days
13.4
TCGA-ZP-A9D2-01A
0 years, male, white, stage:'--, dead, 765 days
13.2
TCGA-DD-A1EH-01A
0 years, male, white, stage:Stage III, alive, 1495 days
13.1
TCGA-DD-A1EJ-01A
0 years, female, white, stage:Stage IIIC, dead, 1005 days
13.0
TCGA-BC-A10X-01A
0 years, female, white, stage:Stage IIIA, dead, 770 days
12.9
TCGA-DD-A118-01A
0 years, female, white, stage:Stage II, alive, 3437 days
12.9
TCGA-CC-5261-01A
0 years, male, asian, stage:Stage II, dead, 97 days
12.8
TCGA-BC-A10Z-01A
0 years, female, white, stage:Stage I, dead, 34 days
12.8
TCGA-FV-A3R2-01A
0 years, male, white, stage:Stage I, dead, 194 days
12.8
TCGA-2Y-A9GU-01A
0 years, female, white, stage:Stage I, alive, 1939 days
12.7
TCGA-ED-A82E-01A
0 years, female, asian, stage:Stage IIIA, alive, 408 days
12.7
TCGA-DD-AADW-01A
0 years, male, asian, stage:Stage I, alive, 587 days
12.6
TCGA-5R-AA1C-01A
0 years, male, white, stage:Stage II, alive, 520 days
12.6
TCGA-BC-A8YO-01A
0 years, female, white, stage:Stage IIIC, alive, 562 days
12.6
TCGA-CC-A7IJ-01A
0 years, male, asian, stage:Stage II, alive, 382 days
12.5
TCGA-ZS-A9CF-01A
0 years, male, white, stage:Stage II, alive, 2412 days
12.5
TCGA-CC-5258-01A
0 years, male, asian, stage:Stage II, dead, 129 days
12.4
TCGA-DD-A1EL-01A
0 years, male, black or african american, stage:Stage II, dead, 415 days
12.3
TCGA-2Y-A9GZ-01A
0 years, female, white, stage:Stage II, dead, 848 days
12.3
TCGA-DD-AA3A-01A
0 years, female, white, stage:Stage I, dead, 410 days
12.3
TCGA-2Y-A9H5-01A
0 years, female, white, stage:Stage I, dead, 555 days
12.2
TCGA-DD-AADB-01A
0 years, male, asian, stage:Stage I, alive, 1242 days
12.2
TCGA-PD-A5DF-01A
0 years, female, white, stage:Stage IIIB, dead, 639 days
12.1
TCGA-DD-AAD8-01A
0 years, female, asian, stage:Stage I, alive, 1219 days
12.1
TCGA-EP-A12J-01A
0 years, male, black or african american, stage:Stage I, alive, 570 days
12.0
TCGA-2Y-A9GV-01A
0 years, female, white, stage:Stage I, dead, 2532 days
12.0
TCGA-BC-A10T-01A
0 years, male, white, stage:'--, dead, 837 days
12.0
TCGA-K7-AAU7-01A
0 years, male, white, stage:Stage II, alive, 359 days
11.8
TCGA-UB-AA0V-01A
0 years, female, white, stage:Stage I, alive, 314 days
11.6
TCGA-DD-A4ND-01A
0 years, female, white, stage:Stage I, alive, 2746 days
11.6
TCGA-XR-A8TG-01A
0 years, male, white, stage:Stage I, alive, 898 days
11.5
TCGA-LG-A9QC-01A
0 years, male, white, stage:Stage I, alive, 425 days
11.5
TCGA-CC-A8HV-01A
0 years, female, asian, stage:Stage II, dead, 279 days
11.4
TCGA-ZP-A9D0-01A
0 years, female, black or african american, stage:'--, alive, 1091 days
11.3
TCGA-FV-A4ZQ-01A
0 years, male, white, stage:Stage I, alive, 12 days
11.3
TCGA-CC-A7IK-01A
0 years, male, asian, stage:Stage IIIA, dead, 262 days
11.3
TCGA-XR-A8TC-01A
0 years, female, white, stage:Stage I, alive, 1339 days
11.3
TCGA-DD-AACN-01A
0 years, male, asian, stage:Stage I, alive, 1302 days
11.2
TCGA-ED-A66Y-01A
0 years, female, asian, stage:Stage IIIA, dead, 296 days
11.2
TCGA-K7-A5RG-01A
0 years, male, black or african american, stage:Stage I, alive, 519 days
11.1
TCGA-DD-AACK-01A
0 years, male, asian, stage:Stage I, alive, 9 days
11.1
TCGA-DD-AADC-01A
0 years, male, asian, stage:Stage I, dead, 425 days
11.1
TCGA-ZP-A9CV-01A
0 years, male, white, stage:'--, dead, 1088 days
11.0
TCGA-DD-AADY-01A
0 years, female, asian, stage:Stage I, alive, 555 days
11.0
TCGA-DD-A4NS-01A
0 years, female, white, stage:Stage I, dead, 2456 days
10.9
TCGA-CC-A5UE-01A
0 years, male, asian, stage:Stage IIIB, dead, 272 days
10.8
TCGA-DD-AACH-01A
0 years, male, asian, stage:Stage II, dead, 195 days
10.8
TCGA-CC-A1HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 101 days
10.7
TCGA-DD-AAD0-01A
0 years, female, asian, stage:Stage I, alive, 137 days
10.6
TCGA-DD-AAD6-01A
0 years, male, asian, stage:Stage IIIA, alive, 672 days
10.6
TCGA-DD-A39W-01A
0 years, female, white, stage:Stage III, dead, 827 days
10.6
TCGA-G3-A25T-01A
0 years, female, white, stage:Stage IIIA, alive, 1553 days
10.6
TCGA-DD-AAVS-01A
0 years, male, asian, stage:Stage I, alive, 1823 days
10.5
TCGA-CC-A9FW-01A
0 years, male, asian, stage:Stage IIIA, alive, 248 days
10.5
TCGA-BC-A10R-01A
0 years, female, white, stage:'--, dead, 308 days
10.5
TCGA-DD-A4NJ-01A
0 years, female, white, stage:Stage II, alive, 928 days
10.5
TCGA-ED-A627-01A
0 years, male, white, stage:Stage I, alive, 423 days
10.4
TCGA-UB-AA0U-01A
0 years, male, white, stage:Stage II, alive, 327 days
10.4
TCGA-DD-A4NE-01A
0 years, female, white, stage:Stage IIIA, dead, 660 days
10.4
TCGA-2Y-A9GS-01A
0 years, male, white, stage:'--, dead, 724 days
10.3
TCGA-BC-A216-01A
0 years, female, white, stage:Stage IIIA, alive, 1351 days
10.3
TCGA-FV-A3R3-01A
0 years, female, white, stage:Stage I, dead, 366 days
10.2
TCGA-UB-A7MA-01A
0 years, female, white, stage:Stage II, alive, 848 days
10.1
TCGA-DD-AAEK-01A
0 years, male, asian, stage:Stage II, alive, 1067 days
10.1
TCGA-QA-A7B7-01A
0 years, male, black or african american, stage:Stage II, alive, 94 days
10.1
TCGA-DD-AAD1-01A
0 years, female, asian, stage:Stage I, alive, 564 days
10.1
TCGA-G3-AAV6-01A
0 years, female, white, stage:Stage IIIA, dead, 65 days
10.0
TCGA-RC-A6M6-01A
0 years, male, white, stage:Stage II, alive, 9 days
10.0
TCGA-2Y-A9H2-01A
0 years, female, white, stage:Stage I, alive, 1731 days
10.0
TCGA-GJ-A9DB-01A
0 years, male, white, stage:Stage I, dead, 67 days
10.0
TCGA-CC-A8HU-01A
0 years, female, asian, stage:Stage IIIA, dead, 344 days
9.9
TCGA-DD-A73D-01A
0 years, female, white, stage:Stage II, alive, 693 days
9.9
TCGA-DD-A4NQ-01A
0 years, male, white, stage:Stage II, dead, 373 days
9.9
TCGA-ED-A7PY-01A
0 years, female, asian, stage:Stage II, alive, 390 days
9.9
TCGA-LG-A6GG-01A
0 years, female, white, stage:Stage II, alive, 387 days
9.8
TCGA-DD-A4NV-01A
0 years, male, white, stage:Stage IIIA, alive, 2398 days
9.8
TCGA-ED-A5KG-01A
0 years, female, asian, stage:Stage II, alive, 854 days
9.8
TCGA-G3-A25Y-01A
0 years, female, asian, stage:Stage I, dead, 452 days
9.7
TCGA-G3-A7M6-01A
0 years, female, white, stage:Stage I, alive, 632 days
9.7
TCGA-CC-A3M9-01A
0 years, male, asian, stage:Stage IIIA, dead, 300 days
9.7
TCGA-WX-AA46-01A
0 years, male, white, stage:Stage II, alive, 756 days
9.7
TCGA-G3-A3CH-01A
0 years, male, asian, stage:Stage IIIA, alive, 780 days
9.7
TCGA-G3-A25U-01A
0 years, female, asian, stage:Stage I, alive, 1636 days
9.7
TCGA-DD-AADD-01A
0 years, male, asian, stage:Stage I, alive, 1231 days
9.6
TCGA-G3-A3CK-01A
0 years, male, asian, stage:Stage I, alive, 585 days
9.6
TCGA-DD-AACZ-01A
0 years, female, asian, stage:Stage I, dead, 171 days
9.6
TCGA-2Y-A9GY-01A
0 years, female, white, stage:Stage II, dead, 757 days
9.6
TCGA-CC-A7IH-01A
0 years, male, asian, stage:Stage IIIA, alive, 365 days
9.6
TCGA-DD-A1EA-01A
0 years, male, asian, stage:Stage II, alive, 2415 days
9.5
TCGA-BC-A3KF-01A
0 years, female, white, stage:Stage I, alive, 8 days
9.5
TCGA-ZP-A9CY-01A
0 years, female, white, stage:'--, alive, 782 days
9.5
TCGA-MI-A75I-01A
0 years, male, black or african american, stage:'--, alive, 630 days
9.5
TCGA-DD-AADL-01A
0 years, male, asian, stage:Stage I, alive, 636 days
9.5
TCGA-2Y-A9H4-01A
0 years, male, black or african american, stage:Stage I, alive, 1452 days
9.5
TCGA-DD-A1EC-01A
0 years, female, white, stage:Stage I, alive, 602 days
9.4
TCGA-DD-AADV-01A
0 years, male, asian, stage:Stage I, alive, 574 days
9.4
TCGA-ED-A7XP-01A
0 years, female, asian, stage:Stage II, alive, 400 days
9.4
TCGA-DD-A1EI-01A
0 years, male, asian, stage:Stage I, alive, 183 days
9.4
TCGA-DD-AACV-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
9.4
TCGA-5C-A9VG-01A
0 years, male, white, stage:Stage II, alive, 328 days
9.3
TCGA-DD-AAE2-01A
0 years, male, asian, stage:Stage I, alive, 638 days
9.3
TCGA-DD-A1EE-01A
0 years, male, white, stage:Stage IIIA, dead, 349 days
9.2
TCGA-CC-5264-01A
0 years, male, asian, stage:Stage IIIA, dead, 102 days
9.2
TCGA-DD-A4NK-01A
0 years, female, white, stage:Stage IIIA, dead, 1210 days
9.1
TCGA-DD-A4NB-01A
0 years, male, white, stage:Stage I, alive, 989 days
9.1
TCGA-XR-A8TD-01A
0 years, female, white, stage:Stage IIIB, alive, 1030 days
9.1
TCGA-2Y-A9GX-01A
0 years, male, white, stage:Stage I, alive, 2442 days
9.1
TCGA-BC-A10U-01A
0 years, male, white, stage:'--, dead, 837 days
9.1
TCGA-UB-A7MB-01A
0 years, male, white, stage:Stage II, alive, 601 days
9.0
TCGA-DD-AADG-01A
0 years, male, asian, stage:Stage IIIA, alive, 1145 days
9.0
TCGA-G3-AAV7-01A
0 years, male, asian, stage:Stage II, alive, 361 days
9.0
TCGA-DD-A1EK-01A
0 years, female, white, stage:Stage IVB, dead, 558 days
9.0
TCGA-CC-A5UD-01A
0 years, male, asian, stage:Stage IIIA, dead, 304 days
9.0
TCGA-DD-A115-01A
0 years, male, white, stage:Stage IIIA, dead, 2542 days
9.0
TCGA-CC-A9FS-01A
0 years, male, asian, stage:Stage II, alive, 211 days
9.0
TCGA-5R-AAAM-01A
0 years, female, white, stage:Stage II, dead, 46 days
8.9
TCGA-DD-AAVZ-01A
0 years, male, asian, stage:Stage I, alive, 1900 days
8.9
TCGA-DD-AAW3-01A
0 years, male, asian, stage:Stage I, alive, 1633 days
8.9
TCGA-DD-AACW-01A
0 years, male, asian, stage:Stage I, alive, 1424 days
8.9
TCGA-CC-A3MB-01A
0 years, male, asian, stage:Stage IIIA, dead, 315 days
8.9
TCGA-DD-AAEE-01A
0 years, male, asian, stage:Stage I, alive, 810 days
8.9
TCGA-EP-A26S-01A
0 years, male, white, stage:Stage I, alive, 608 days
8.9
TCGA-ED-A8O5-01A
0 years, female, asian, stage:Stage IIIA, alive, 406 days
8.9
TCGA-FV-A23B-01A
0 years, female, white, stage:Stage II, dead, 1852 days
8.8
TCGA-DD-A11C-01A
0 years, male, white, stage:Stage I, alive, 662 days
8.8
TCGA-ED-A66X-01A
0 years, male, asian, stage:Stage IIIA, alive, 406 days
8.8
TCGA-DD-AAW0-01A
0 years, male, asian, stage:Stage I, alive, 2015 days
8.8
TCGA-FV-A3I1-01A
0 years, female, white, stage:Stage II, dead, 247 days
8.8
TCGA-G3-A6UC-01A
0 years, male, white, stage:Stage IIIB, alive, 671 days
8.8
TCGA-DD-A113-01A
0 years, female, white, stage:Stage II, alive, 2425 days
8.8
TCGA-BC-A5W4-01A
0 years, male, white, stage:Stage IIIA, dead, 547 days
8.7
TCGA-CC-A5UC-01A
0 years, male, asian, stage:Stage IIIA, dead, 347 days
8.7
TCGA-UB-A7MC-01A
0 years, male, white, stage:Stage IIIA, alive, 500 days
8.6
TCGA-ED-A8O6-01A
0 years, female, asian, stage:Stage IIIA, dead, 56 days
8.6
TCGA-DD-AAD3-01A
0 years, male, asian, stage:Stage I, alive, 1295 days
8.6
TCGA-DD-A11D-01A
0 years, female, white, stage:Stage I, dead, 1560 days
8.6
TCGA-MR-A520-01A
0 years, male, white, stage:Stage I, alive, 229 days
8.6
TCGA-DD-AACS-01A
0 years, male, asian, stage:Stage I, alive, 1804 days
8.6
TCGA-ZS-A9CG-01A
0 years, male, white, stage:Stage II, alive, 341 days
8.5
TCGA-DD-A1ED-01A
0 years, male, white, stage:Stage I, alive, 2301 days
8.5
TCGA-UB-A7MD-01A
0 years, male, black or african american, stage:Stage I, dead, 52 days
8.5
TCGA-G3-AAV1-01A
0 years, male, asian, stage:Stage IIIC, dead, 359 days
8.5
TCGA-G3-A5SJ-01A
0 years, male, white, stage:Stage I, alive, 698 days
8.4
TCGA-WJ-A86L-01A
0 years, female, white, stage:Stage I, alive, 345 days
8.4
TCGA-GJ-A6C0-01A
0 years, female, white, stage:Stage II, dead, 31 days
8.4
TCGA-DD-AACA-01A
0 years, male, asian, stage:Stage I, alive, 2301 days
8.4
TCGA-NI-A4U2-01A
0 years, male, white, stage:Stage IIIA, dead, 1791 days
8.3
TCGA-KR-A7K0-01A
0 years, male, white, stage:Stage I, dead, 65 days
8.3
TCGA-BC-A217-01A
0 years, female, white, stage:Stage II, dead, 1397 days
8.3
TCGA-UB-A7MF-01A
0 years, male, white, stage:Stage IIIA, dead, 214 days
8.3
TCGA-DD-AADU-01A
0 years, male, asian, stage:Stage II, alive, 554 days
8.2
TCGA-5C-A9VH-01A
0 years, male, white, stage:Stage I, alive, 322 days
8.2
TCGA-CC-A3MA-01A
0 years, male, asian, stage:Stage IIIA, dead, 303 days
8.2
TCGA-RC-A7SB-01A
0 years, male, asian, stage:Stage II, alive, 588 days
8.2
TCGA-BC-A112-01A
0 years, male, white, stage:'--, dead, 153 days
8.2
TCGA-DD-AACU-01A
0 years, male, asian, stage:Stage I, alive, 1567 days
8.2
TCGA-2Y-A9HA-01A
0 years, male, white, stage:Stage II, dead, 36 days
8.2
TCGA-G3-A5SL-01A
0 years, male, white, stage:Stage II, alive, 621 days
8.1
TCGA-5R-AA1D-01A
0 years, female, white, stage:Stage IIIA, alive, 449 days
8.1
TCGA-CC-A8HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 140 days
8.0
TCGA-G3-A5SI-01A
0 years, male, asian, stage:Stage II, dead, 768 days
8.0
TCGA-DD-A73F-01A
0 years, female, white, stage:Stage I, alive, 1085 days
8.0
TCGA-DD-A4NN-01A
0 years, female, white, stage:Stage I, dead, 899 days
8.0
TCGA-BW-A5NO-01A
0 years, male, black or african american, stage:Stage IIIA, alive, 20 days
8.0
TCGA-XR-A8TF-01A
0 years, male, white, stage:Stage I, dead, 693 days
8.0
TCGA-BC-A3KG-01A
0 years, female, white, stage:Stage II, alive, 680 days
7.9
TCGA-DD-A4NG-01A
0 years, male, white, stage:Stage IIIA, dead, 802 days
7.9
TCGA-DD-AACL-01A
0 years, female, asian, stage:Stage I, dead, 107 days
7.9
TCGA-DD-A114-01A
0 years, male, black or african american, stage:Stage II, dead, 1149 days
7.9
TCGA-DD-A1EB-01A
0 years, female, stage:Stage I, alive, 2017 days
7.9
TCGA-YA-A8S7-01A
0 years, male, white, stage:Stage IIIA, dead, 412 days
7.9
TCGA-DD-AADP-01A
0 years, male, asian, stage:Stage I, alive, 458 days
7.7
TCGA-WX-AA44-01A
0 years, female, white, stage:Stage I, alive, 615 days
7.7
TCGA-DD-A4NP-01A
0 years, male, white, stage:Stage I, alive, 3308 days
7.7
TCGA-CC-A7IF-01A
0 years, male, asian, stage:Stage IIIA, dead, 649 days
7.6
TCGA-HP-A5N0-01A
0 years, female, stage:'--, dead, 752 days
7.6
TCGA-ZP-A9D1-01A
0 years, female, white, stage:'--, alive, 21 days
7.6
TCGA-RC-A7SH-01A
0 years, male, asian, stage:Stage II, alive, 468 days
7.6
TCGA-2Y-A9HB-01A
0 years, male, stage:Stage I, alive, 260 days
7.6
TCGA-RC-A7SK-01A
0 years, male, asian, stage:Stage I, alive, 472 days
7.6
TCGA-DD-AAD5-01A
0 years, male, asian, stage:Stage I, alive, 1345 days
7.5
TCGA-ED-A4XI-01A
0 years, male, asian, stage:Stage II, alive, 819 days
7.5
TCGA-CC-A7IE-01A
0 years, male, asian, stage:Stage IIIA, dead, 217 days
7.5
TCGA-DD-A73C-01A
0 years, female, white, stage:Stage IIIA, alive, 701 days
7.5
TCGA-DD-A3A8-01A
0 years, male, white, stage:Stage II, dead, 11 days
7.5
TCGA-G3-A7M8-01A
0 years, male, asian, stage:Stage I, alive, 430 days
7.5
TCGA-DD-AACX-01A
0 years, male, asian, stage:Stage II, alive, 170 days
7.4
TCGA-DD-AAEG-01A
0 years, female, asian, stage:Stage I, alive, 719 days
7.4
TCGA-RC-A7S9-01A
0 years, female, asian, stage:Stage I, alive, 640 days
7.3
TCGA-DD-AAW1-01A
0 years, male, asian, stage:Stage IIIA, alive, 1989 days
7.3
TCGA-MI-A75G-01A
0 years, male, white, stage:Stage II, alive, 698 days
7.2
TCGA-DD-AAEA-01A
0 years, male, asian, stage:Stage I, alive, 575 days
7.2
TCGA-2Y-A9GT-01A
0 years, male, white, stage:Stage I, dead, 1624 days
7.2
TCGA-2Y-A9H6-01A
0 years, female, white, stage:Stage I, alive, 357 days
7.2
TCGA-G3-AAV3-01A
0 years, female, white, stage:Stage II, alive, 412 days
7.2
TCGA-DD-AAEH-01A
0 years, male, asian, stage:Stage I, alive, 784 days
7.2
TCGA-K7-A5RF-01A
0 years, male, white, stage:Stage I, alive, 631 days
7.1
TCGA-ZP-A9CZ-01A
0 years, male, asian, stage:'--, alive, 706 days
7.1
TCGA-ZS-A9CE-01A
0 years, female, white, stage:Stage II, alive, 1241 days
7.1
TCGA-FV-A3I0-01A
0 years, female, white, stage:Stage II, alive, 848 days
7.1
TCGA-T1-A6J8-01A
0 years, male, white, stage:'--, alive, 23 days
7.1
TCGA-EP-A3RK-01A
0 years, male, white, stage:Stage IIIA, alive, 363 days
7.0
TCGA-2Y-A9H0-01A
0 years, male, white, stage:Stage IIIA, alive, 3675 days
7.0
TCGA-BD-A2L6-01A
0 years, male, white, stage:'--, alive, 1363 days
7.0
TCGA-BC-A10Y-01A
0 years, male, white, stage:'--, dead, 711 days
6.9
TCGA-DD-A4NL-01A
0 years, male, white, stage:Stage I, alive, 1711 days
6.9
TCGA-2Y-A9H7-01A
0 years, female, white, stage:Stage I, alive, 1168 days
6.8
TCGA-DD-AAC8-01A
0 years, male, asian, stage:Stage I, dead, 16 days
6.8
TCGA-DD-AACQ-01A
0 years, male, asian, stage:Stage II, dead, 432 days
6.8
TCGA-GJ-A3OU-01A
0 years, male, white, stage:Stage I, alive, 879 days
6.7
TCGA-ZP-A9D4-01A
0 years, female, white, stage:'--, alive, 395 days
6.7
TCGA-G3-A25V-01A
0 years, male, white, stage:Stage I, alive, 860 days
6.7
TCGA-CC-5262-01A
0 years, male, asian, stage:Stage IIIC, dead, 103 days
6.6
TCGA-MI-A75H-01A
0 years, male, white, stage:'--, alive, 747 days
6.6
TCGA-EP-A2KB-01A
0 years, female, white, stage:Stage I, dead, 596 days
6.6
TCGA-DD-AAE9-01A
0 years, male, asian, stage:Stage I, alive, 722 days
6.5
TCGA-BC-A10S-01A
0 years, male, white, stage:'--, dead, 1423 days
6.5
TCGA-WQ-A9G7-01A
0 years, female, white, stage:'--, alive, 30 days
6.5
TCGA-DD-A4NO-01A
0 years, male, white, stage:Stage I, alive, 2245 days
6.5
TCGA-DD-AAE7-01A
0 years, male, asian, stage:Stage I, alive, 644 days
6.5
TCGA-G3-A7M7-01A
0 years, male, white, stage:Stage I, alive, 361 days
6.4
TCGA-ED-A7XO-01A
0 years, male, asian, stage:Stage IIIA, alive, 427 days
6.4
TCGA-DD-A4NI-01A
0 years, male, white, stage:Stage II, alive, 816 days
6.4
TCGA-DD-AADR-01A
0 years, male, asian, stage:Stage I, alive, 2028 days
6.4
TCGA-G3-A3CI-01A
0 years, male, white, stage:Stage I, alive, 180 days
6.4
TCGA-DD-AAVY-01A
0 years, male, asian, stage:Stage IIIA, alive, 1970 days
6.4
TCGA-CC-A3MC-01A
0 years, male, asian, stage:Stage IIIA, alive, 363 days
6.4
TCGA-DD-A73A-01A
0 years, male, white, stage:Stage I, alive, 728 days
6.4
TCGA-K7-A6G5-01A
0 years, male, white, stage:Stage I, alive, 512 days
6.4
TCGA-ZS-A9CD-01A
0 years, male, white, stage:Stage II, dead, 1386 days
6.4
TCGA-BC-A110-01A
0 years, female, black or african american, stage:'--, dead, 2116 days
6.4
TCGA-DD-A4NR-01A
0 years, female, white, stage:Stage I, dead, 9 days
6.3
TCGA-NI-A8LF-01A
0 years, male, white, stage:Stage I, alive, 799 days
6.3
TCGA-DD-AAVQ-01A
0 years, male, asian, stage:Stage I, alive, 2728 days
6.3
TCGA-FV-A496-01A
0 years, female, white, stage:Stage I, alive, 10 days
6.3
TCGA-DD-AAE6-01A
0 years, female, asian, stage:Stage I, alive, 141 days
6.3
TCGA-DD-AADA-01A
0 years, female, asian, stage:Stage I, alive, 1233 days
6.3
TCGA-DD-A116-01A
0 years, male, asian, stage:Stage IIIA, dead, 1622 days
6.3
TCGA-4R-AA8I-01A
0 years, male, white, stage:Stage II, dead, 262 days
6.2
TCGA-MR-A8JO-01A
0 years, male, white, stage:Stage I, alive, 330 days
6.2
TCGA-UB-A7ME-01A
0 years, male, asian, stage:Stage I, alive, 486 days
6.2
TCGA-DD-A3A5-01A
0 years, female, white, stage:Stage III, dead, 3125 days
6.2
TCGA-RC-A6M4-01A
0 years, female, white, stage:Stage IIIA, alive, 22 days
6.2
TCGA-G3-A7M5-01A
0 years, male, asian, stage:Stage I, alive, 447 days
6.1
TCGA-BD-A3ER-01A
0 years, male, white, stage:Stage II, alive, 1115 days
6.1
TCGA-LG-A9QD-01A
0 years, male, white, stage:Stage IIIA, alive, 366 days
6.1
TCGA-G3-A25Z-01A
0 years, male, asian, stage:Stage I, alive, 655 days
6.1
TCGA-DD-AACP-01A
0 years, male, asian, stage:Stage I, alive, 415 days
6.1
TCGA-G3-A3CG-01A
0 years, male, white, stage:Stage I, alive, 673 days
6.1
TCGA-DD-AAE1-01A
0 years, male, asian, stage:Stage I, alive, 552 days
5.9
TCGA-G3-A5SK-01A
0 years, male, white, stage:Stage I, alive, 744 days
5.9
TCGA-RC-A6M5-01A
0 years, female, white, stage:Stage IVA, alive, 15 days
5.9
TCGA-FV-A2QQ-01A
0 years, male, white, stage:Stage I, alive, 729 days
5.9
TCGA-EP-A2KC-01A
0 years, male, black or african american, stage:Stage I, dead, 19 days
5.9
TCGA-DD-AAVR-01A
0 years, male, asian, stage:Stage I, alive, 2513 days
5.9
TCGA-BD-A3EP-01A
0 years, female, black or african american, stage:Stage I, alive, 409 days
5.8
TCGA-RG-A7D4-01A
0 years, male, black or african american, stage:Stage II, alive, 1098 days
5.8
TCGA-DD-AADK-01A
0 years, female, asian, stage:Stage II, alive, 1049 days
5.8
TCGA-G3-AAV2-01A
0 years, male, white, stage:Stage I, alive, 372 days
5.7
TCGA-DD-AAVP-01A
0 years, male, asian, stage:Stage I, alive, 2752 days
5.7
TCGA-2Y-A9H9-01A
0 years, male, white, stage:Stage I, alive, 697 days
5.7
TCGA-ED-A7PX-01A
0 years, female, asian, stage:Stage II, alive, 6 days
5.7
TCGA-2Y-A9H8-01A
0 years, female, white, stage:'--, dead, 633 days
5.7
TCGA-DD-AAED-01A
0 years, male, asian, stage:Stage I, alive, 763 days
5.7
TCGA-ED-A459-01A
0 years, male, asian, stage:Stage II, alive, 910 days
5.6
TCGA-DD-AAVX-01A
0 years, male, asian, stage:Stage II, alive, 1718 days
5.6
TCGA-CC-A7IL-01A
0 years, male, asian, stage:Stage IIIA, dead, 278 days
5.6
TCGA-RC-A7SF-01A
0 years, male, asian, stage:Stage I, alive, 579 days
5.5
TCGA-DD-AAW2-01A
0 years, male, asian, stage:Stage I, alive, 1855 days
5.5
TCGA-DD-AAD2-01A
0 years, male, asian, stage:Stage I, alive, 658 days
5.5
TCGA-DD-AACT-01A
0 years, female, asian, stage:Stage I, alive, 1562 days
5.5
TCGA-DD-AACB-01A
0 years, female, asian, stage:Stage I, alive, 2324 days
5.4
TCGA-DD-AACY-01A
0 years, male, asian, stage:Stage I, alive, 1450 days
5.4
TCGA-3K-AAZ8-01A
0 years, male, black or african american, stage:Stage IIIB, alive, 396 days
5.3
TCGA-FV-A2QR-01A
0 years, male, white, stage:Stage I, dead, 581 days
5.3
TCGA-G3-A25S-01A
0 years, male, white, stage:Stage I, dead, 416 days
5.3
TCGA-DD-A3A1-01A
0 years, male, stage:Stage IIIA, dead, 233 days
5.2
TCGA-DD-AADQ-01A
0 years, male, asian, stage:Stage II, alive, 436 days
5.2
TCGA-DD-A3A9-01A
0 years, female, white, stage:Stage IVB, dead, 931 days
5.2
TCGA-DD-A39X-01A
0 years, female, white, stage:Stage I, dead, 1694 days
5.1
TCGA-DD-AAVV-01A
0 years, male, asian, stage:Stage II, alive, 2455 days
5.1
TCGA-DD-AAE3-01A
0 years, male, asian, stage:Stage I, alive, 566 days
5.1
TCGA-G3-AAV5-01A
0 years, male, white, stage:Stage II, alive, 354 days
5.0
TCGA-KR-A7K8-01A
0 years, male, stage:Stage I, alive, 906 days
5.0
TCGA-DD-AACI-01A
0 years, male, asian, stage:Stage II, alive, 1618 days
4.9
TCGA-DD-AACC-01A
0 years, male, asian, stage:Stage I, dead, 1685 days
4.9
TCGA-BC-A69I-01A
0 years, male, white, stage:Stage I, alive, 387 days
4.9
TCGA-HP-A5MZ-01A
0 years, male, stage:Stage I, dead, 91 days
4.9
TCGA-DD-AADF-01A
0 years, female, asian, stage:Stage I, dead, 115 days
4.9
TCGA-DD-A3A2-01A
0 years, female, white, stage:Stage I, dead, 2131 days
4.8
TCGA-DD-A1EG-01A
0 years, male, white, stage:Stage I, dead, 1372 days
4.8
TCGA-DD-AACE-01A
0 years, male, asian, stage:Stage I, alive, 2184 days
4.8
TCGA-G3-AAUZ-01A
0 years, male, stage:Stage I, alive, 480 days
4.8
TCGA-DD-A119-01A
0 years, male, asian, stage:Stage IV, dead, 223 days
4.8
TCGA-CC-A7II-01A
0 years, male, asian, stage:Stage IIIA, alive, 399 days
4.7
TCGA-G3-A25X-01A
0 years, male, asian, stage:Stage II, alive, 1779 days
4.6
TCGA-DD-AAE0-01A
0 years, female, asian, stage:Stage IIIA, alive, 555 days
4.6
TCGA-DD-AACF-01A
0 years, male, asian, stage:Stage I, dead, 365 days
4.5
TCGA-G3-A5SM-01A
0 years, male, white, stage:Stage II, alive, 520 days
4.5
TCGA-ED-A7PZ-01A
0 years, male, asian, stage:Stage II, alive, 6 days
4.4
TCGA-KR-A7K7-01A
0 years, female, white, stage:Stage II, alive, 951 days
4.4
TCGA-DD-AAEI-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
4.4
TCGA-2Y-A9GW-01A
0 years, male, white, stage:Stage I, dead, 1271 days
4.3
TCGA-MI-A75C-01A
0 years, male, white, stage:Stage I, alive, 291 days
4.1
TCGA-MI-A75E-01A
0 years, male, white, stage:Stage IIIC, alive, 507 days
4.1
TCGA-DD-AAEB-01A
0 years, male, asian, stage:Stage I, alive, 478 days
4.1
TCGA-DD-AACD-01A
0 years, male, asian, stage:Stage I, dead, 381 days
4.1
TCGA-KR-A7K2-01A
0 years, male, white, stage:Stage I, alive, 829 days
4.0
TCGA-DD-AAE4-01A
0 years, female, asian, stage:Stage I, alive, 608 days
4.0
TCGA-DD-AACG-01A
0 years, male, asian, stage:Stage II, dead, 469 days
3.8
TCGA-DD-A39Z-01A
0 years, female, stage:Stage II, dead, 601 days
3.8
TCGA-DD-AADJ-01A
0 years, female, asian, stage:Stage I, alive, 1066 days
3.8
TCGA-CC-5259-01A
0 years, female, asian, stage:Stage IIIC, alive, 250 days
3.8
TCGA-WX-AA47-01A
0 years, female, white, stage:Stage IIIA, dead, 556 days
3.7
TCGA-G3-AAV0-01A
0 years, male, asian, stage:Stage I, alive, 476 days
3.7
TCGA-DD-AADM-01A
0 years, male, asian, stage:Stage II, dead, 12 days
3.7
TCGA-DD-AADI-01A
0 years, female, asian, stage:Stage I, alive, 1085 days
3.6
TCGA-DD-AACO-01A
0 years, male, asian, stage:Stage I, alive, 1876 days
3.6
TCGA-5C-AAPD-01A
0 years, male, asian, stage:Stage II, alive, 20 days
3.6
TCGA-DD-A39Y-01A
0 years, male, asian, stage:Stage I, dead, 171 days
3.6
TCGA-DD-AAC9-01A
0 years, male, asian, stage:Stage I, alive, 347 days
3.5
TCGA-ES-A2HS-01A
0 years, male, white, stage:Stage I, dead, 688 days
3.5
TCGA-EP-A2KA-01A
0 years, female, white, stage:Stage IIIA, dead, 627 days
3.4
TCGA-CC-A7IG-01A
0 years, male, asian, stage:Stage II, dead, 299 days
3.4
TCGA-EP-A3JL-01A
0 years, male, white, stage:Stage I, alive, 303 days
3.3
TCGA-WQ-AB4B-01A
0 years, male, white, stage:Stage II, alive, 395 days
3.3
TCGA-G3-A3CJ-01A
0 years, male, american indian or alaska native, stage:Stage II, alive, 594 days
3.3
TCGA-2Y-A9H3-01A
0 years, male, white, stage:Stage II, alive, 1516 days
3.2
TCGA-DD-A3A3-01A
0 years, male, asian, stage:Stage I, dead, 535 days
3.2
TCGA-BC-A69H-01A
0 years, male, white, stage:Stage II, alive, 444 days
3.2
TCGA-DD-AADS-01A
0 years, male, asian, stage:Stage I, alive, 474 days
3.1
TCGA-O8-A75V-01A
0 years, male, stage:Stage I, alive, 538 days
3.1
TCGA-CC-A123-01A
0 years, female, asian, stage:Stage IIIA, alive, 219 days
3.0
TCGA-DD-AACJ-01A
0 years, male, asian, stage:Stage II, alive, 2102 days
2.8
TCGA-DD-A39V-01A
0 years, male, white, stage:Stage II, dead, 643 days
2.7
TCGA-DD-AAVU-01A
0 years, male, asian, stage:Stage II, alive, 2202 days
2.6
TCGA-DD-A3A6-01A
0 years, female, white, stage:Stage II, dead, 3258 days
2.6
TCGA-DD-AADO-01A
0 years, male, asian, stage:Stage I, alive, 453 days
2.6
TCGA-DD-A3A7-01A
0 years, male, stage:Stage IIIB, dead, 419 days
2.5
TCGA-2Y-A9H1-01A
0 years, male, white, stage:Stage I, dead, 1229 days
2.4
TCGA-FV-A495-01A
0 years, female, white, stage:Stage II, alive, 1 days
2.4
TCGA-DD-AADN-01A
0 years, male, asian, stage:Stage I, alive, 898 days
2.0
TCGA-ES-A2HT-01A
0 years, male, black or african american, stage:Stage I, dead, 438 days
1.9
TCGA-DD-A73G-01A
0 years, female, white, stage:Stage I, alive, 3478 days
1.9
TCGA-FV-A4ZP-01A
0 years, male, white, stage:Stage IIIA, dead, 2486 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
PEX13 is not prognostic in Liver Hepatocellular Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
7.5
Number of samples
231
Samples
Sample
Description
TPM
DO45245
0 years, female, NA, stage:2, dead, 240 days
20.5
DO45227
0 years, female, NA, stage:2, alive, 1020 days
19.4
DO45119
0 years, male, NA, stage:3, dead, 510 days
17.2
DO45107
0 years, female, NA, stage:2, alive, 1710 days
14.5
DO45237
0 years, male, NA, stage:2, alive, 900 days
14.0
DO45105
0 years, male, NA, stage:1, alive, 1680 days
13.9
DO45145
0 years, male, NA, stage:3, dead, 60 days
13.0
DO48681
0 years, male, NA, stage:2, alive, 900 days
12.6
DO23552
0 years, female, NA, stage:1, alive, 810 days
12.2
DO45101
0 years, male, NA, stage:2, alive, 1680 days
11.8
DO23512
0 years, male, NA, stage:1, alive, 1260 days
11.7
DO45117
0 years, female, NA, stage:2, dead, 1110 days
11.4
DO45203
0 years, female, NA, stage:2, alive, 1170 days
11.0
DO45137
0 years, male, NA, stage:1, alive, 1320 days
10.8
DO45195
0 years, male, NA, stage:1, alive, 390 days
10.6
DO45217
0 years, female, NA, stage:3, dead, 270 days
10.5
DO48746
0 years, male, NA, stage:3, alive, 570 days
10.3
DO23524
0 years, female, NA, stage:2, alive, 1050 days
10.2
DO45253
0 years, male, NA, stage:2, alive, 870 days
10.2
DO45197
0 years, male, NA, stage:2, alive, 1170 days
10.1
DO45215
0 years, male, NA, stage:2, alive, 1170 days
10.1
DO45113
0 years, male, NA, stage:3, alive, 1560 days
10.0
DO45111
0 years, male, NA, stage:2, alive, 1590 days
9.9
DO45233
0 years, male, NA, stage:3, alive, 900 days
9.9
DO45219
0 years, male, NA, stage:2, alive, 1080 days
9.8
DO23514
0 years, male, NA, stage:2, alive, 1290 days
9.8
DO45193
0 years, female, NA, stage:4, dead, 120 days
9.7
DO48727
0 years, female, NA, stage:2, dead, 390 days
9.6
DO48732
0 years, male, NA, stage:3, alive, 630 days
9.5
DO45131
0 years, male, NA, stage:4, dead, 360 days
9.5
DO48717
0 years, male, NA, stage:4, dead, 180 days
9.5
DO50820
0 years, female, NA, stage:3, alive, 510 days
9.5
DO23531
0 years, female, NA, stage:3, alive, 900 days
9.5
DO45213
0 years, male, NA, stage:1, alive, 1200 days
9.5
DO45183
0 years, female, NA, stage:2, dead, 570 days
9.4
DO45247
0 years, female, NA, stage:2, alive, 210 days
9.4
DO48719
0 years, male, NA, stage:2, alive, 690 days
9.4
DO45187
0 years, female, NA, stage:1, alive, 1260 days
9.4
DO45167
0 years, male, NA, stage:2, dead, 1440 days
9.3
DO50774
0 years, female, NA, stage:2, alive, 720 days
9.3
DO23544
0 years, male, NA, stage:2, alive, 960 days
9.3
DO227643
0 years, male, NA, stage:2, alive, 1260 days
9.2
DO45129
0 years, male, NA, stage:3, alive, 1470 days
9.2
DO45223
0 years, male, NA, stage:4, alive, 1020 days
9.2
DO45267
0 years, male, NA, stage:3, dead, 570 days
9.2
DO45127
0 years, male, NA, stage:3, dead, 420 days
9.2
DO45096
0 years, male, NA, stage:2, dead, 1290 days
9.1
DO23542
0 years, male, NA, stage:3, alive, 960 days
9.1
DO45121
0 years, male, NA, stage:3, alive, 1530 days
9.0
DO45092
0 years, male, NA, stage:4, dead, 1200 days
9.0
DO45299
0 years, female, NA, stage:1, alive, 1440 days
8.8
DO23521
0 years, male, NA, stage:3, alive, 1110 days
8.8
DO45179
0 years, female, NA, stage:2, alive, 600 days
8.7
DO23538
0 years, male, NA, stage:2, alive, 450 days
8.7
DO45283
0 years, male, NA, stage:3, alive, 510 days
8.7
DO48677
0 years, male, NA, stage:3, alive, 1140 days
8.7
DO45177
0 years, female, NA, stage:3, alive, 1260 days
8.6
DO45263
0 years, male, NA, stage:3, dead, 270 days
8.6
DO45239
0 years, male, NA, stage:2, alive, 870 days
8.6
DO45123
0 years, female, NA, stage:2, dead, 570 days
8.6
DO45301
0 years, male, NA, stage:2, dead, 1440 days
8.6
DO23528
0 years, female, NA, stage:2, alive, 1020 days
8.6
DO45231
0 years, male, NA, stage:2, alive, 930 days
8.5
DO45161
0 years, male, NA, stage:2, dead, 540 days
8.5
DO45235
0 years, female, NA, stage:1, alive, 900 days
8.5
DO48704
0 years, female, NA, stage:3, alive, 750 days
8.4
DO23546
0 years, male, NA, stage:2, alive, 1050 days
8.4
DO45261
0 years, male, NA, stage:3, alive, 990 days
8.3
DO23543
0 years, male, NA, stage:2, alive, 1020 days
8.3
DO45211
0 years, male, NA, stage:3, alive, 240 days
8.3
DO23529
0 years, male, NA, stage:4, alive, 930 days
8.3
DO48757
0 years, female, NA, stage:3, alive, 480 days
8.2
DO50840
0 years, male, NA, stage:2, alive, 330 days
8.2
DO45297
0 years, female, NA, stage:4, dead, 1260 days
8.1
DO50802
0 years, male, NA, stage:2, alive, 930 days
8.1
DO45225
0 years, male, NA, stage:1, alive, 1050 days
8.1
DO48672
0 years, male, NA, stage:2, alive, 450 days
8.1
DO50803
0 years, female, NA, stage:1, alive, 540 days
8.1
DO50789
0 years, female, NA, stage:2, alive, 570 days
8.1
DO50855
0 years, male, NA, stage:2, alive, 570 days
8.1
DO45209
0 years, male, NA, stage:4, alive, 1350 days
8.1
DO48761
0 years, male, NA, stage:2, alive, 870 days
8.0
DO45115
0 years, male, NA, stage:2, alive, 840 days
8.0
DO50787
0 years, male, NA, stage:3, alive, 480 days
8.0
DO48701
0 years, male, NA, stage:2, alive, 780 days
8.0
DO45153
0 years, female, NA, stage:2, alive, 1380 days
8.0
DO23509
0 years, male, NA, stage:3, dead, 780 days
8.0
DO23510
0 years, female, NA, stage:2, alive, 870 days
7.9
DO48759
0 years, male, NA, stage:3, alive, 720 days
7.9
DO23535
0 years, male, NA, stage:1, alive, 960 days
7.9
DO45207
0 years, male, NA, stage:1, alive, 1050 days
7.9
DO45181
0 years, female, NA, stage:2, alive, 1200 days
7.9
DO48728
0 years, female, NA, stage:2, alive, 150 days
7.8
DO45259
0 years, male, NA, stage:3, alive, 330 days
7.8
DO45269
0 years, male, NA, stage:3, alive, 750 days
7.8
DO23541
0 years, male, NA, stage:2, alive, 930 days
7.8
DO45251
0 years, female, NA, stage:2, alive, 900 days
7.7
DO45173
0 years, male, NA, stage:3, alive, 1170 days
7.7
DO48760
0 years, female, NA, stage:2, alive, 690 days
7.7
DO45275
0 years, male, NA, stage:3, dead, 10 days
7.7
DO48697
0 years, female, NA, stage:2, dead, 810 days
7.6
DO50804
0 years, male, NA, stage:2, alive, 720 days
7.6
DO23537
0 years, male, NA, stage:2, dead, 900 days
7.5
DO45099
0 years, male, NA, stage:3, alive, 1590 days
7.5
DO23517
0 years, male, NA, stage:2, alive, 1200 days
7.5
DO45241
0 years, male, NA, stage:1, alive, 1080 days
7.5
DO45189
0 years, female, NA, stage:2, alive, 1200 days
7.5
DO23551
0 years, male, NA, stage:3, dead, 150 days
7.4
DO23526
0 years, male, NA, stage:3, alive, 1050 days
7.4
DO48743
0 years, female, NA, stage:2, alive, 570 days
7.4
DO23539
0 years, male, NA, stage:1, alive, 1110 days
7.4
DO50825
0 years, male, NA, stage:2, alive, 390 days
7.4
DO50817
0 years, male, NA, stage:2, alive, 390 days
7.4
DO45185
0 years, male, NA, stage:2, alive, 600 days
7.4
DO48716
0 years, male, NA, stage:2, alive, 720 days
7.3
DO45191
0 years, female, NA, stage:2, alive, 1200 days
7.3
DO23540
0 years, male, NA, stage:1, alive, 750 days
7.2
DO45097
0 years, male, NA, stage:3, alive, 1620 days
7.2
DO48712
0 years, male, NA, stage:2, alive, 810 days
7.2
DO23534
0 years, male, NA, stage:2, alive, 840 days
7.2
DO50799
0 years, female, NA, stage:2, alive, 540 days
7.2
DO23513
0 years, male, NA, stage:3, alive, 1200 days
7.1
DO50816
0 years, male, NA, stage:2, alive, 390 days
7.1
DO50832
0 years, male, NA, stage:3, alive, 90 days
7.1
DO50815
0 years, male, NA, stage:3, alive, 150 days
7.0
DO45157
0 years, male, NA, stage:2, alive, 1980 days
7.0
DO45165
0 years, male, NA, stage:2, alive, 690 days
7.0
DO45175
0 years, male, NA, stage:2, alive, 1140 days
7.0
DO45243
0 years, female, NA, stage:3, alive, 930 days
6.9
DO50811
0 years, male, NA, stage:1, alive, 450 days
6.9
DO45279
0 years, male, NA, stage:3, alive, 1290 days
6.8
DO23525
0 years, male, NA, stage:4, alive, 1050 days
6.8
DO48730
0 years, female, NA, stage:2, alive, 630 days
6.8
DO50808
0 years, male, NA, stage:2, alive, 570 days
6.8
DO48720
0 years, female, NA, stage:2, alive, 570 days
6.8
DO48721
0 years, female, NA, stage:1, alive, 900 days
6.8
DO23515
0 years, male, NA, stage:2, alive, 1230 days
6.7
DO45103
0 years, male, NA, stage:3, alive, 450 days
6.7
DO50807
0 years, male, NA, stage:1, alive, 540 days
6.7
DO45281
0 years, male, NA, stage:4, alive, 750 days
6.7
DO50793
0 years, male, NA, stage:4, alive, 540 days
6.7
DO23550
0 years, male, NA, stage:1, alive, 990 days
6.7
DO45155
0 years, male, NA, stage:2, alive, 2160 days
6.6
DO45133
0 years, male, NA, stage:3, dead, 660 days
6.6
DO45273
0 years, male, NA, stage:2, alive, 480 days
6.6
DO23518
0 years, male, NA, stage:2, alive, 1320 days
6.6
DO48695
0 years, male, NA, stage:2, alive, 720 days
6.5
DO45307
0 years, female, NA, stage:4, dead, 240 days
6.5
DO45159
0 years, male, NA, stage:3, alive, 1470 days
6.5
DO48706
0 years, male, NA, stage:2, alive, 870 days
6.5
DO45287
0 years, male, NA, stage:1, alive, 390 days
6.5
DO48736
0 years, female, NA, stage:1, alive, 600 days
6.4
DO48725
0 years, male, NA, stage:1, alive, 780 days
6.4
DO45093
0 years, male, NA, stage:2, dead, 720 days
6.4
DO45141
0 years, male, NA, stage:2, alive, 1320 days
6.4
DO48737
0 years, male, NA, stage:1, alive, 720 days
6.4
DO48723
0 years, male, NA, stage:1, alive, 600 days
6.4
DO45139
0 years, male, NA, stage:3, alive, 1320 days
6.3
DO23549
0 years, male, NA, stage:3, alive, 990 days
6.3
DO45094
0 years, male, NA, stage:3, alive, 1650 days
6.3
DO50791
0 years, female, NA, stage:1, dead, 480 days
6.2
DO50800
0 years, male, NA, stage:2, alive, 510 days
6.2
DO23547
0 years, male, NA, stage:1, alive, 1020 days
6.2
DO23532
0 years, female, NA, stage:1, alive, 960 days
6.2
DO45265
0 years, male, NA, stage:3, alive, 1020 days
6.2
DO50819
0 years, female, NA, stage:2, alive, 510 days
6.2
DO45169
0 years, male, NA, stage:3, alive, 1350 days
6.2
DO23527
0 years, male, NA, stage:1, alive, 1050 days
6.2
DO23536
0 years, male, NA, stage:2, alive, 930 days
6.1
DO23533
0 years, male, NA, stage:2, alive, 900 days
6.1
DO23548
0 years, female, NA, stage:1, alive, 840 days
6.1
DO50798
0 years, male, NA, stage:3, dead, 30 days
6.0
DO23545
0 years, male, NA, stage:2, dead, 570 days
6.0
DO45143
0 years, male, NA, stage:3, alive, 1290 days
6.0
DO50822
0 years, male, NA, stage:2, alive, 510 days
6.0
DO50818
0 years, male, NA, stage:2, alive, 510 days
6.0
DO48674
0 years, male, NA, stage:2, alive, 1260 days
6.0
DO45205
0 years, female, NA, stage:2, dead, 90 days
5.9
DO48751
0 years, male, NA, stage:2, dead, 480 days
5.9
DO50859
0 years, male, NA, stage:2, alive, 180 days
5.9
DO45221
0 years, female, NA, stage:4, dead, 390 days
5.9
DO50850
0 years, male, NA, stage:3, alive, 720 days
5.9
DO45125
0 years, male, NA, stage:3, alive, 1680 days
5.8
DO45171
0 years, male, NA, stage:3, alive, 600 days
5.8
DO48700
0 years, female, NA, stage:2, alive, 810 days
5.8
DO45199
0 years, female, NA, stage:2, alive, 1350 days
5.8
DO50829
0 years, male, NA, stage:3, alive, 570 days
5.8
DO45201
0 years, male, NA, stage:1, alive, 900 days
5.7
DO45289
0 years, female, NA, stage:3, alive, 360 days
5.7
DO45257
0 years, male, NA, stage:3, alive, 810 days
5.7
DO50857
0 years, male, NA, stage:2, alive, 210 days
5.7
DO48741
0 years, male, NA, stage:3, alive, 240 days
5.6
DO45091
0 years, male, NA, stage:2, dead, 1320 days
5.6
DO227801
0 years, female, NA, stage:1, alive, 660 days
5.6
DO45303
0 years, female, NA, stage:3, alive, 990 days
5.6
DO45277
0 years, male, NA, stage:3, alive, 600 days
5.6
DO50813
0 years, male, NA, stage:2, alive, 420 days
5.6
DO50776
0 years, male, NA, stage:1, alive, 690 days
5.5
DO45163
0 years, male, NA, stage:2, alive, 960 days
5.4
DO45249
0 years, male, NA, stage:1, alive, 630 days
5.4
DO45135
0 years, male, NA, stage:1, alive, 1410 days
5.4
DO50809
0 years, male, NA, stage:3, dead, 720 days
5.4
DO45305
0 years, male, NA, stage:4, alive, 300 days
5.3
DO23516
0 years, male, NA, stage:3, dead, 20 days
5.3
DO50783
0 years, male, NA, stage:3, alive, 480 days
5.2
DO48715
0 years, female, NA, stage:2, dead, 690 days
5.2
DO50845
0 years, male, NA, stage:3, alive, 210 days
5.1
DO48679
0 years, male, NA, stage:2, alive, 1200 days
5.1
DO48742
0 years, male, NA, stage:2, alive, 600 days
5.0
DO45229
0 years, male, NA, stage:1, alive, 990 days
5.0
DO50785
0 years, male, NA, stage:4, dead, 90 days
5.0
DO50806
0 years, male, NA, stage:4, alive, 540 days
5.0
DO48682
0 years, female, NA, stage:3, dead, 120 days
4.9
DO48693
0 years, male, NA, stage:2, alive, 900 days
4.9
DO45255
0 years, male, NA, stage:3, alive, 720 days
4.9
DO50778
0 years, male, NA, stage:4, alive, 630 days
4.9
DO50844
0 years, male, NA, stage:4, alive, 300 days
4.8
DO23523
0 years, male, NA, stage:3, alive, 1080 days
4.8
DO45149
0 years, female, NA, stage:2, alive, 1260 days
4.8
DO23530
0 years, male, NA, stage:4, dead, 180 days
4.7
DO50805
0 years, male, NA, stage:2, alive, 690 days
4.7
DO45109
0 years, male, NA, stage:2, alive, 1590 days
4.3
DO45095
0 years, male, NA, stage:2, alive, 1620 days
4.3
DO23508
0 years, female, NA, stage:2, alive, 390 days
4.2
DO45285
0 years, male, NA, stage:3, alive, 480 days
3.6
DO50814
0 years, male, NA, stage:3, alive, 420 days
3.6
DO23519
0 years, male, NA, stage:3, alive, 630 days
3.5
DO48733
0 years, male, NA, stage:2, alive, 600 days
3.1
DO23511
0 years, female, NA, stage:3, dead, 180 days
2.8
DO48747
0 years, male, NA, stage:3, alive, 540 days
2.8
DO50839
0 years, female, NA, stage:3, alive, 330 days
2.5
Show allShow less
LIVER HEPATOCELLULAR CARCINOMA - Protein relative expression (CPTAC)
Number of samples
330
Samples
Sample ID
Sample type
nRPX
851
Tumor
1.2
975
Tumor
1.2
724
Normal
1.1
533
Tumor
1.0
191
Tumor
1.0
537
Tumor
0.9
937
Tumor
0.9
665
Tumor
0.8
187
Tumor
0.7
123
Tumor
0.7
957
Tumor
0.7
131
Tumor
0.7
221
Tumor
0.7
983
Tumor
0.7
227
Tumor
0.7
1043
Tumor
0.7
471
Tumor
0.7
135
Tumor
0.7
365
Tumor
0.6
777
Tumor
0.6
641
Tumor
0.6
363
Tumor
0.6
395
Tumor
0.6
967
Tumor
0.5
447
Tumor
0.5
535
Tumor
0.5
553
Tumor
0.5
721
Tumor
0.5
1013
Tumor
0.5
1031
Tumor
0.5
357
Tumor
0.5
627
Tumor
0.5
141
Tumor
0.5
391
Tumor
0.4
978
Normal
0.4
545
Tumor
0.4
148
Normal
0.4
1025
Tumor
0.4
446
Normal
0.4
435
Tumor
0.4
393
Tumor
0.4
353
Tumor
0.4
884
Normal
0.4
568
Normal
0.4
981
Tumor
0.4
913
Tumor
0.4
925
Tumor
0.4
746
Normal
0.4
912
Normal
0.4
388
Normal
0.4
145
Tumor
0.4
222
Normal
0.4
921
Tumor
0.4
815
Tumor
0.4
356
Normal
0.4
1041
Tumor
0.4
616
Normal
0.3
113
Tumor
0.3
358
Normal
0.3
923
Tumor
0.3
517
Tumor
0.3
824
Normal
0.3
911
Tumor
0.3
1014
Normal
0.3
443
Tumor
0.3
722
Normal
0.3
685
Tumor
0.3
332
Normal
0.3
882
Normal
0.3
477
Tumor
0.3
786
Normal
0.3
636
Normal
0.3
618
Normal
0.3
723
Tumor
0.3
818
Normal
0.3
114
Normal
0.3
742
Normal
0.3
147
Tumor
0.3
873
Tumor
0.3
1027
Tumor
0.3
1045
Tumor
0.3
755
Tumor
0.3
574
Normal
0.3
648
Normal
0.3
852
Normal
0.3
491
Tumor
0.3
953
Tumor
0.3
1046
Normal
0.3
1016
Normal
0.3
714
Normal
0.3
984
Normal
0.3
195
Tumor
0.3
341
Tumor
0.3
396
Normal
0.3
525
Tumor
0.3
686
Normal
0.3
361
Tumor
0.3
272
Normal
0.3
125
Tumor
0.3
111
Normal
0.3
218
Normal
0.3
436
Normal
0.2
448
Normal
0.2
285
Tumor
0.2
955
Tumor
0.2
482
Normal
0.2
628
Normal
0.2
411
Tumor
0.2
664
Normal
0.2
617
Tumor
0.2
196
Normal
0.2
534
Normal
0.2
328
Normal
0.2
695
Tumor
0.2
1044
Normal
0.2
716
Normal
0.2
258
Normal
0.2
267
Tumor
0.2
314
Normal
0.2
642
Normal
0.2
127
Tumor
0.2
481
Tumor
0.2
666
Normal
0.2
858
Normal
0.2
862
Normal
0.2
128
Normal
0.2
232
Normal
0.2
527
Tumor
0.2
186
Normal
0.2
564
Normal
0.2
487
Tumor
0.2
1042
Normal
0.2
262
Normal
0.2
663
Tumor
0.2
528
Normal
0.2
342
Normal
0.2
696
Normal
0.2
423
Tumor
0.2
1032
Normal
0.2
354
Normal
0.2
944
Normal
0.2
964
Normal
0.2
1015
Tumor
0.2
422
Normal
0.2
878
Normal
0.2
427
Tumor
0.2
728
Normal
0.2
571
Tumor
0.2
672
Normal
0.2
188
Normal
0.2
857
Tumor
0.2
368
Normal
0.2
364
Normal
0.2
352
Normal
0.2
816
Normal
0.2
778
Normal
0.2
1022
Normal
0.2
462
Normal
0.2
915
Tumor
0.2
1028
Normal
0.2
785
Tumor
0.2
278
Normal
0.2
868
Normal
0.2
938
Normal
0.2
982
Normal
0.2
228
Normal
0.2
572
Normal
0.2
883
Tumor
0.1
756
Normal
0.1
412
Normal
0.1
977
Tumor
0.1
452
Normal
0.1
698
Normal
0.1
297
Tumor
0.1
416
Normal
0.1
922
Normal
0.1
866
Normal
0.1
745
Tumor
0.1
951
Tumor
0.1
162
Normal
0.1
615
Tumor
0.1
943
Tumor
0.1
1026
Normal
0.1
474
Normal
0.1
344
Normal
0.1
421
Tumor
0.1
494
Normal
0.1
445
Tumor
0.1
432
Normal
0.1
867
Tumor
0.1
813
Tumor
0.1
126
Normal
0.1
217
Tumor
0.1
268
Normal
0.1
327
Tumor
0.1
286
Normal
0.1
861
Tumor
0.1
426
Normal
0.1
558
Normal
0.1
864
Normal
0.1
464
Normal
0.1
954
Normal
0.1
433
Tumor
0.1
926
Normal
0.1
223
Tumor
0.1
968
Normal
0.1
172
Normal
0.1
271
Tumor
0.1
662
Normal
0.1
161
Tumor
0.1
376
Normal
0.1
918
Normal
0.1
546
Normal
0.1
874
Normal
0.1
431
Tumor
0.1
392
Normal
0.1
415
Tumor
0.0
461
Tumor
0.0
1021
Tumor
0.0
741
Tumor
0.0
881
Tumor
0.0
513
Tumor
0.0
171
Tumor
0.0
914
Normal
0.0
444
Normal
0.0
554
Normal
0.0
434
Normal
0.0
715
Tumor
0.0
424
Normal
0.0
671
Tumor
0.0
224
Normal
0.0
958
Normal
0.0
362
Normal
0.0
966
Normal
0.0
214
Normal
0.0
863
Tumor
0.0
414
Normal
0.0
976
Normal
0.0
384
Normal
0.0
387
Tumor
0.0
526
Normal
0.0
538
Normal
0.0
451
Tumor
0.0
386
Normal
0.0
817
Tumor
0.0
865
Tumor
0.0
523
Tumor
0.0
484
Normal
0.0
284
Normal
0.0
738
Normal
0.0
212
Normal
0.0
257
Tumor
0.0
472
Normal
0.0
428
Normal
0.0
394
Normal
0.0
367
Tumor
0.0
298
Normal
0.0
916
Normal
0.0
463
Tumor
0.0
823
Tumor
0.0
366
Normal
0.0
455
Tumor
0.0
514
Normal
-0.1
478
Normal
-0.1
956
Normal
-0.1
727
Tumor
-0.1
814
Normal
-0.1
647
Tumor
-0.1
132
Normal
-0.1
112
Tumor
-0.1
963
Tumor
-0.1
497
Tumor
-0.1
488
Normal
-0.1
697
Tumor
-0.1
924
Normal
-0.1
138
Normal
-0.1
466
Normal
-0.1
515
Tumor
-0.1
952
Normal
-0.1
965
Tumor
-0.1
465
Tumor
-0.1
567
Tumor
-0.1
231
Tumor
-0.1
744
Normal
-0.1
136
Normal
-0.1
312
Normal
-0.1
713
Tumor
-0.1
383
Tumor
-0.1
563
Tumor
-0.1
142
Normal
-0.1
351
Tumor
-0.1
331
Tumor
-0.1
124
Normal
-0.1
261
Tumor
-0.2
137
Tumor
-0.2
213
Tumor
-0.2
185
Tumor
-0.2
498
Normal
-0.2
456
Normal
-0.2
468
Normal
-0.2
518
Normal
-0.2
277
Tumor
-0.2
375
Tumor
-0.2
536
Normal
-0.2
192
Normal
-0.2
557
Tumor
-0.2
635
Tumor
-0.2
493
Tumor
-0.2
483
Tumor
-0.3
661
Tumor
-0.3
737
Tumor
-0.3
524
Normal
-0.3
355
Tumor
-0.3
146
Normal
-0.3
743
Tumor
-0.3
492
Normal
-0.3
413
Tumor
-0.3
917
Tumor
-0.3
467
Tumor
-0.4
425
Tumor
-0.4
877
Tumor
-0.4
473
Tumor
-0.5
313
Tumor
-0.5
343
Tumor
-0.5
311
Tumor
-0.5
516
Normal
-0.6
573
Tumor
-0.6
211
Tumor
-0.7
283
Tumor
-0.8
385
Tumor
-0.9
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LIVER CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
