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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
WDR26 is not prognostic in Liver Hepatocellular Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
16.5
Number of samples
362
Samples
Sample
Description
TPM
TCGA-ZP-A9D2-01A
0 years, male, white, stage:'--, dead, 765 days
72.8
TCGA-DD-AACS-01A
0 years, male, asian, stage:Stage I, alive, 1804 days
51.9
TCGA-BC-A3KG-01A
0 years, female, white, stage:Stage II, alive, 680 days
51.5
TCGA-DD-A1EH-01A
0 years, male, white, stage:Stage III, alive, 1495 days
50.0
TCGA-DD-A4NH-01A
0 years, female, white, stage:Stage IIIB, alive, 917 days
49.7
TCGA-CC-5261-01A
0 years, male, asian, stage:Stage II, dead, 97 days
49.4
TCGA-DD-AA3A-01A
0 years, female, white, stage:Stage I, dead, 410 days
48.1
TCGA-DD-AAEG-01A
0 years, female, asian, stage:Stage I, alive, 719 days
43.2
TCGA-DD-AADY-01A
0 years, female, asian, stage:Stage I, alive, 555 days
42.2
TCGA-CC-5260-01A
0 years, female, asian, stage:Stage IIIC, dead, 87 days
40.0
TCGA-G3-AAV7-01A
0 years, male, asian, stage:Stage II, alive, 361 days
39.2
TCGA-CC-A8HV-01A
0 years, female, asian, stage:Stage II, dead, 279 days
38.1
TCGA-DD-AAVV-01A
0 years, male, asian, stage:Stage II, alive, 2455 days
37.4
TCGA-G3-A7M6-01A
0 years, female, white, stage:Stage I, alive, 632 days
37.2
TCGA-CC-A8HS-01A
0 years, male, asian, stage:Stage IIIC, dead, 300 days
37.0
TCGA-DD-AADW-01A
0 years, male, asian, stage:Stage I, alive, 587 days
36.9
TCGA-DD-A1EE-01A
0 years, male, white, stage:Stage IIIA, dead, 349 days
36.9
TCGA-DD-AAC8-01A
0 years, male, asian, stage:Stage I, dead, 16 days
36.1
TCGA-DD-AAD1-01A
0 years, female, asian, stage:Stage I, alive, 564 days
35.7
TCGA-UB-AA0U-01A
0 years, male, white, stage:Stage II, alive, 327 days
35.0
TCGA-DD-AACN-01A
0 years, male, asian, stage:Stage I, alive, 1302 days
34.6
TCGA-5R-AA1C-01A
0 years, male, white, stage:Stage II, alive, 520 days
34.0
TCGA-CC-A7IK-01A
0 years, male, asian, stage:Stage IIIA, dead, 262 days
33.7
TCGA-2Y-A9H2-01A
0 years, female, white, stage:Stage I, alive, 1731 days
33.5
TCGA-ED-A82E-01A
0 years, female, asian, stage:Stage IIIA, alive, 408 days
33.5
TCGA-XR-A8TC-01A
0 years, female, white, stage:Stage I, alive, 1339 days
33.5
TCGA-DD-A1EA-01A
0 years, male, asian, stage:Stage II, alive, 2415 days
33.4
TCGA-ED-A7PX-01A
0 years, female, asian, stage:Stage II, alive, 6 days
33.1
TCGA-DD-A4NA-01A
0 years, female, white, stage:Stage IIIC, alive, 1008 days
32.2
TCGA-DD-A113-01A
0 years, female, white, stage:Stage II, alive, 2425 days
31.8
TCGA-CC-5263-01A
0 years, male, asian, stage:Stage IIIA, dead, 129 days
31.7
TCGA-DD-A4NF-01A
0 years, male, white, stage:Stage I, alive, 942 days
31.7
TCGA-CC-5264-01A
0 years, male, asian, stage:Stage IIIA, dead, 102 days
31.4
TCGA-ED-A66Y-01A
0 years, female, asian, stage:Stage IIIA, dead, 296 days
31.3
TCGA-ZP-A9CV-01A
0 years, male, white, stage:'--, dead, 1088 days
31.2
TCGA-ED-A5KG-01A
0 years, female, asian, stage:Stage II, alive, 854 days
30.7
TCGA-DD-A1EF-01A
0 years, female, white, stage:Stage I, dead, 394 days
30.3
TCGA-ED-A8O5-01A
0 years, female, asian, stage:Stage IIIA, alive, 406 days
30.3
TCGA-G3-A7M9-01A
0 years, male, white, stage:Stage IIIB, dead, 56 days
30.0
TCGA-DD-AADD-01A
0 years, male, asian, stage:Stage I, alive, 1231 days
29.1
TCGA-DD-AAVS-01A
0 years, male, asian, stage:Stage I, alive, 1823 days
29.0
TCGA-ED-A7XP-01A
0 years, female, asian, stage:Stage II, alive, 400 days
28.9
TCGA-UB-A7MC-01A
0 years, male, white, stage:Stage IIIA, alive, 500 days
28.3
TCGA-ED-A66X-01A
0 years, male, asian, stage:Stage IIIA, alive, 406 days
27.9
TCGA-CC-A7IH-01A
0 years, male, asian, stage:Stage IIIA, alive, 365 days
27.9
TCGA-DD-A4NN-01A
0 years, female, white, stage:Stage I, dead, 899 days
27.5
TCGA-DD-A73E-01A
0 years, male, white, stage:Stage I, alive, 44 days
27.3
TCGA-BC-A10Q-01A
0 years, female, white, stage:'--, dead, 1135 days
27.3
TCGA-DD-A114-01A
0 years, male, black or african american, stage:Stage II, dead, 1149 days
26.9
TCGA-BC-A112-01A
0 years, male, white, stage:'--, dead, 153 days
26.9
TCGA-WX-AA44-01A
0 years, female, white, stage:Stage I, alive, 615 days
26.8
TCGA-5C-A9VG-01A
0 years, male, white, stage:Stage II, alive, 328 days
26.8
TCGA-DD-AACZ-01A
0 years, female, asian, stage:Stage I, dead, 171 days
26.6
TCGA-DD-A4NJ-01A
0 years, female, white, stage:Stage II, alive, 928 days
26.5
TCGA-2Y-A9H5-01A
0 years, female, white, stage:Stage I, dead, 555 days
26.2
TCGA-DD-A4NO-01A
0 years, male, white, stage:Stage I, alive, 2245 days
25.8
TCGA-2Y-A9GX-01A
0 years, male, white, stage:Stage I, alive, 2442 days
25.6
TCGA-DD-A4NQ-01A
0 years, male, white, stage:Stage II, dead, 373 days
25.2
TCGA-CC-A1HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 101 days
25.0
TCGA-DD-AAD3-01A
0 years, male, asian, stage:Stage I, alive, 1295 days
24.9
TCGA-ZP-A9D0-01A
0 years, female, black or african american, stage:'--, alive, 1091 days
24.7
TCGA-DD-AAVZ-01A
0 years, male, asian, stage:Stage I, alive, 1900 days
24.5
TCGA-DD-A3A9-01A
0 years, female, white, stage:Stage IVB, dead, 931 days
24.2
TCGA-QA-A7B7-01A
0 years, male, black or african american, stage:Stage II, alive, 94 days
24.1
TCGA-DD-A118-01A
0 years, female, white, stage:Stage II, alive, 3437 days
23.9
TCGA-LG-A6GG-01A
0 years, female, white, stage:Stage II, alive, 387 days
23.8
TCGA-BC-A10U-01A
0 years, male, white, stage:'--, dead, 837 days
23.5
TCGA-FV-A3I0-01A
0 years, female, white, stage:Stage II, alive, 848 days
23.5
TCGA-FV-A3I1-01A
0 years, female, white, stage:Stage II, dead, 247 days
23.4
TCGA-FV-A23B-01A
0 years, female, white, stage:Stage II, dead, 1852 days
23.3
TCGA-DD-AAW0-01A
0 years, male, asian, stage:Stage I, alive, 2015 days
23.3
TCGA-DD-AACU-01A
0 years, male, asian, stage:Stage I, alive, 1567 days
23.2
TCGA-BC-A10R-01A
0 years, female, white, stage:'--, dead, 308 days
23.1
TCGA-DD-AADB-01A
0 years, male, asian, stage:Stage I, alive, 1242 days
23.0
TCGA-CC-A8HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 140 days
22.9
TCGA-DD-A39W-01A
0 years, female, white, stage:Stage III, dead, 827 days
22.6
TCGA-DD-A4NG-01A
0 years, male, white, stage:Stage IIIA, dead, 802 days
22.5
TCGA-ZP-A9D1-01A
0 years, female, white, stage:'--, alive, 21 days
22.5
TCGA-UB-A7MA-01A
0 years, female, white, stage:Stage II, alive, 848 days
22.2
TCGA-DD-AACE-01A
0 years, male, asian, stage:Stage I, alive, 2184 days
22.2
TCGA-ED-A97K-01A
0 years, male, asian, stage:Stage IIIA, alive, 6 days
22.0
TCGA-EP-A12J-01A
0 years, male, black or african american, stage:Stage I, alive, 570 days
21.8
TCGA-DD-AADA-01A
0 years, female, asian, stage:Stage I, alive, 1233 days
21.7
TCGA-XR-A8TF-01A
0 years, male, white, stage:Stage I, dead, 693 days
21.5
TCGA-CC-A3MA-01A
0 years, male, asian, stage:Stage IIIA, dead, 303 days
21.3
TCGA-DD-AAVY-01A
0 years, male, asian, stage:Stage IIIA, alive, 1970 days
20.9
TCGA-5C-A9VH-01A
0 years, male, white, stage:Stage I, alive, 322 days
20.7
TCGA-DD-AADL-01A
0 years, male, asian, stage:Stage I, alive, 636 days
20.5
TCGA-DD-AADP-01A
0 years, male, asian, stage:Stage I, alive, 458 days
20.5
TCGA-XR-A8TG-01A
0 years, male, white, stage:Stage I, alive, 898 days
20.4
TCGA-DD-AACX-01A
0 years, male, asian, stage:Stage II, alive, 170 days
20.3
TCGA-K7-AAU7-01A
0 years, male, white, stage:Stage II, alive, 359 days
20.3
TCGA-DD-AAVW-01A
0 years, male, asian, stage:Stage I, alive, 2317 days
20.2
TCGA-UB-A7ME-01A
0 years, male, asian, stage:Stage I, alive, 486 days
20.2
TCGA-DD-A11B-01A
0 years, male, white, stage:Stage I, dead, 14 days
20.1
TCGA-CC-A3MC-01A
0 years, male, asian, stage:Stage IIIA, alive, 363 days
20.0
TCGA-2Y-A9GS-01A
0 years, male, white, stage:'--, dead, 724 days
19.7
TCGA-DD-A4NS-01A
0 years, female, white, stage:Stage I, dead, 2456 days
19.7
TCGA-DD-A1EI-01A
0 years, male, asian, stage:Stage I, alive, 183 days
19.7
TCGA-G3-A3CK-01A
0 years, male, asian, stage:Stage I, alive, 585 days
19.7
TCGA-DD-AAEK-01A
0 years, male, asian, stage:Stage II, alive, 1067 days
19.5
TCGA-DD-AADV-01A
0 years, male, asian, stage:Stage I, alive, 574 days
19.4
TCGA-FV-A2QR-01A
0 years, male, white, stage:Stage I, dead, 581 days
19.3
TCGA-DD-AACY-01A
0 years, male, asian, stage:Stage I, alive, 1450 days
19.2
TCGA-DD-AACW-01A
0 years, male, asian, stage:Stage I, alive, 1424 days
19.1
TCGA-2Y-A9GU-01A
0 years, female, white, stage:Stage I, alive, 1939 days
19.0
TCGA-CC-A7IJ-01A
0 years, male, asian, stage:Stage II, alive, 382 days
19.0
TCGA-WQ-A9G7-01A
0 years, female, white, stage:'--, alive, 30 days
18.9
TCGA-CC-A3M9-01A
0 years, male, asian, stage:Stage IIIA, dead, 300 days
18.8
TCGA-DD-AAD0-01A
0 years, female, asian, stage:Stage I, alive, 137 days
18.8
TCGA-BC-A8YO-01A
0 years, female, white, stage:Stage IIIC, alive, 562 days
18.8
TCGA-GJ-A3OU-01A
0 years, male, white, stage:Stage I, alive, 879 days
18.7
TCGA-DD-A4NV-01A
0 years, male, white, stage:Stage IIIA, alive, 2398 days
18.6
TCGA-DD-AACT-01A
0 years, female, asian, stage:Stage I, alive, 1562 days
18.5
TCGA-KR-A7K0-01A
0 years, male, white, stage:Stage I, dead, 65 days
18.5
TCGA-DD-A1EL-01A
0 years, male, black or african american, stage:Stage II, dead, 415 days
18.5
TCGA-FV-A3R3-01A
0 years, female, white, stage:Stage I, dead, 366 days
18.4
TCGA-EP-A2KB-01A
0 years, female, white, stage:Stage I, dead, 596 days
18.4
TCGA-LG-A9QC-01A
0 years, male, white, stage:Stage I, alive, 425 days
18.4
TCGA-ZP-A9D4-01A
0 years, female, white, stage:'--, alive, 395 days
18.3
TCGA-DD-AAED-01A
0 years, male, asian, stage:Stage I, alive, 763 days
18.3
TCGA-DD-A73B-01A
0 years, female, white, stage:Stage I, dead, 283 days
18.2
TCGA-K7-A5RG-01A
0 years, male, black or african american, stage:Stage I, alive, 519 days
18.2
TCGA-DD-AAVR-01A
0 years, male, asian, stage:Stage I, alive, 2513 days
18.1
TCGA-G3-AAV5-01A
0 years, male, white, stage:Stage II, alive, 354 days
17.9
TCGA-CC-A5UE-01A
0 years, male, asian, stage:Stage IIIB, dead, 272 days
17.9
TCGA-DD-A11C-01A
0 years, male, white, stage:Stage I, alive, 662 days
17.9
TCGA-UB-A7MD-01A
0 years, male, black or african american, stage:Stage I, dead, 52 days
17.7
TCGA-DD-A4NR-01A
0 years, female, white, stage:Stage I, dead, 9 days
17.7
TCGA-DD-AAE1-01A
0 years, male, asian, stage:Stage I, alive, 552 days
17.7
TCGA-G3-AAV2-01A
0 years, male, white, stage:Stage I, alive, 372 days
17.7
TCGA-G3-A25Y-01A
0 years, female, asian, stage:Stage I, dead, 452 days
17.7
TCGA-DD-AAW3-01A
0 years, male, asian, stage:Stage I, alive, 1633 days
17.6
TCGA-DD-A1EJ-01A
0 years, female, white, stage:Stage IIIC, dead, 1005 days
17.6
TCGA-G3-AAV3-01A
0 years, female, white, stage:Stage II, alive, 412 days
17.6
TCGA-G3-A5SL-01A
0 years, male, white, stage:Stage II, alive, 621 days
17.5
TCGA-DD-AACI-01A
0 years, male, asian, stage:Stage II, alive, 1618 days
17.5
TCGA-ZS-A9CE-01A
0 years, female, white, stage:Stage II, alive, 1241 days
17.4
TCGA-2Y-A9HB-01A
0 years, male, stage:Stage I, alive, 260 days
17.4
TCGA-BC-A216-01A
0 years, female, white, stage:Stage IIIA, alive, 1351 days
17.4
TCGA-DD-AACL-01A
0 years, female, asian, stage:Stage I, dead, 107 days
17.3
TCGA-CC-A9FW-01A
0 years, male, asian, stage:Stage IIIA, alive, 248 days
17.3
TCGA-G3-AAV1-01A
0 years, male, asian, stage:Stage IIIC, dead, 359 days
16.9
TCGA-DD-AADC-01A
0 years, male, asian, stage:Stage I, dead, 425 days
16.8
TCGA-WJ-A86L-01A
0 years, female, white, stage:Stage I, alive, 345 days
16.7
TCGA-2Y-A9HA-01A
0 years, male, white, stage:Stage II, dead, 36 days
16.6
TCGA-RC-A7S9-01A
0 years, female, asian, stage:Stage I, alive, 640 days
16.5
TCGA-G3-A6UC-01A
0 years, male, white, stage:Stage IIIB, alive, 671 days
16.5
TCGA-XR-A8TE-01A
0 years, male, white, stage:Stage IIIA, alive, 925 days
16.5
TCGA-G3-AAV4-01A
0 years, female, white, stage:Stage I, dead, 27 days
16.4
TCGA-CC-A5UC-01A
0 years, male, asian, stage:Stage IIIA, dead, 347 days
16.3
TCGA-DD-A4NB-01A
0 years, male, white, stage:Stage I, alive, 989 days
16.2
TCGA-CC-5258-01A
0 years, male, asian, stage:Stage II, dead, 129 days
16.2
TCGA-RC-A7SH-01A
0 years, male, asian, stage:Stage II, alive, 468 days
16.2
TCGA-DD-AACH-01A
0 years, male, asian, stage:Stage II, dead, 195 days
16.2
TCGA-XR-A8TD-01A
0 years, female, white, stage:Stage IIIB, alive, 1030 days
16.0
TCGA-DD-AAD2-01A
0 years, male, asian, stage:Stage I, alive, 658 days
16.0
TCGA-ED-A4XI-01A
0 years, male, asian, stage:Stage II, alive, 819 days
15.9
TCGA-2Y-A9GV-01A
0 years, female, white, stage:Stage I, dead, 2532 days
15.8
TCGA-ZS-A9CF-01A
0 years, male, white, stage:Stage II, alive, 2412 days
15.8
TCGA-DD-A73D-01A
0 years, female, white, stage:Stage II, alive, 693 days
15.8
TCGA-DD-A1EC-01A
0 years, female, white, stage:Stage I, alive, 602 days
15.8
TCGA-PD-A5DF-01A
0 years, female, white, stage:Stage IIIB, dead, 639 days
15.7
TCGA-T1-A6J8-01A
0 years, male, white, stage:'--, alive, 23 days
15.6
TCGA-MI-A75C-01A
0 years, male, white, stage:Stage I, alive, 291 days
15.6
TCGA-FV-A3R2-01A
0 years, male, white, stage:Stage I, dead, 194 days
15.5
TCGA-BC-A10X-01A
0 years, female, white, stage:Stage IIIA, dead, 770 days
15.5
TCGA-DD-A115-01A
0 years, male, white, stage:Stage IIIA, dead, 2542 days
15.4
TCGA-ED-A8O6-01A
0 years, female, asian, stage:Stage IIIA, dead, 56 days
15.3
TCGA-DD-A11D-01A
0 years, female, white, stage:Stage I, dead, 1560 days
15.2
TCGA-2Y-A9H7-01A
0 years, female, white, stage:Stage I, alive, 1168 days
15.1
TCGA-ZP-A9CY-01A
0 years, female, white, stage:'--, alive, 782 days
15.1
TCGA-BD-A3ER-01A
0 years, male, white, stage:Stage II, alive, 1115 days
15.1
TCGA-EP-A2KC-01A
0 years, male, black or african american, stage:Stage I, dead, 19 days
15.0
TCGA-ED-A7PY-01A
0 years, female, asian, stage:Stage II, alive, 390 days
14.9
TCGA-ED-A627-01A
0 years, male, white, stage:Stage I, alive, 423 days
14.9
TCGA-DD-AAE0-01A
0 years, female, asian, stage:Stage IIIA, alive, 555 days
14.8
TCGA-DD-A1EG-01A
0 years, male, white, stage:Stage I, dead, 1372 days
14.7
TCGA-DD-AADG-01A
0 years, male, asian, stage:Stage IIIA, alive, 1145 days
14.7
TCGA-2Y-A9H6-01A
0 years, female, white, stage:Stage I, alive, 357 days
14.6
TCGA-RC-A7SK-01A
0 years, male, asian, stage:Stage I, alive, 472 days
14.5
TCGA-DD-AACQ-01A
0 years, male, asian, stage:Stage II, dead, 432 days
14.4
TCGA-DD-A4ND-01A
0 years, female, white, stage:Stage I, alive, 2746 days
14.4
TCGA-FV-A496-01A
0 years, female, white, stage:Stage I, alive, 10 days
14.4
TCGA-GJ-A9DB-01A
0 years, male, white, stage:Stage I, dead, 67 days
14.3
TCGA-4R-AA8I-01A
0 years, male, white, stage:Stage II, dead, 262 days
14.3
TCGA-EP-A26S-01A
0 years, male, white, stage:Stage I, alive, 608 days
14.3
TCGA-G3-A3CG-01A
0 years, male, white, stage:Stage I, alive, 673 days
14.3
TCGA-CC-A7IG-01A
0 years, male, asian, stage:Stage II, dead, 299 days
14.2
TCGA-CC-A8HU-01A
0 years, female, asian, stage:Stage IIIA, dead, 344 days
14.1
TCGA-DD-AAW1-01A
0 years, male, asian, stage:Stage IIIA, alive, 1989 days
14.1
TCGA-DD-AAVQ-01A
0 years, male, asian, stage:Stage I, alive, 2728 days
14.0
TCGA-DD-AAVP-01A
0 years, male, asian, stage:Stage I, alive, 2752 days
13.9
TCGA-DD-AACV-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
13.9
TCGA-MI-A75I-01A
0 years, male, black or african american, stage:'--, alive, 630 days
13.8
TCGA-DD-AAD5-01A
0 years, male, asian, stage:Stage I, alive, 1345 days
13.8
TCGA-RG-A7D4-01A
0 years, male, black or african american, stage:Stage II, alive, 1098 days
13.8
TCGA-O8-A75V-01A
0 years, male, stage:Stage I, alive, 538 days
13.6
TCGA-CC-A9FS-01A
0 years, male, asian, stage:Stage II, alive, 211 days
13.5
TCGA-G3-A5SM-01A
0 years, male, white, stage:Stage II, alive, 520 days
13.5
TCGA-DD-AAW2-01A
0 years, male, asian, stage:Stage I, alive, 1855 days
13.4
TCGA-DD-A1EK-01A
0 years, female, white, stage:Stage IVB, dead, 558 days
13.4
TCGA-CC-A7IE-01A
0 years, male, asian, stage:Stage IIIA, dead, 217 days
13.3
TCGA-BC-A3KF-01A
0 years, female, white, stage:Stage I, alive, 8 days
13.3
TCGA-DD-AAEH-01A
0 years, male, asian, stage:Stage I, alive, 784 days
13.2
TCGA-ZP-A9CZ-01A
0 years, male, asian, stage:'--, alive, 706 days
13.2
TCGA-5R-AA1D-01A
0 years, female, white, stage:Stage IIIA, alive, 449 days
13.1
TCGA-YA-A8S7-01A
0 years, male, white, stage:Stage IIIA, dead, 412 days
13.1
TCGA-UB-AA0V-01A
0 years, female, white, stage:Stage I, alive, 314 days
13.1
TCGA-DD-A4NK-01A
0 years, female, white, stage:Stage IIIA, dead, 1210 days
12.9
TCGA-HP-A5N0-01A
0 years, female, stage:'--, dead, 752 days
12.9
TCGA-CC-A3MB-01A
0 years, male, asian, stage:Stage IIIA, dead, 315 days
12.9
TCGA-DD-AAE6-01A
0 years, female, asian, stage:Stage I, alive, 141 days
12.9
TCGA-ZS-A9CD-01A
0 years, male, white, stage:Stage II, dead, 1386 days
12.8
TCGA-DD-AACA-01A
0 years, male, asian, stage:Stage I, alive, 2301 days
12.7
TCGA-DD-AACP-01A
0 years, male, asian, stage:Stage I, alive, 415 days
12.7
TCGA-2Y-A9GW-01A
0 years, male, white, stage:Stage I, dead, 1271 days
12.6
TCGA-2Y-A9H8-01A
0 years, female, white, stage:'--, dead, 633 days
12.6
TCGA-DD-AADI-01A
0 years, female, asian, stage:Stage I, alive, 1085 days
12.5
TCGA-DD-AADR-01A
0 years, male, asian, stage:Stage I, alive, 2028 days
12.4
TCGA-BD-A3EP-01A
0 years, female, black or african american, stage:Stage I, alive, 409 days
12.4
TCGA-2Y-A9H0-01A
0 years, male, white, stage:Stage IIIA, alive, 3675 days
12.4
TCGA-CC-5262-01A
0 years, male, asian, stage:Stage IIIC, dead, 103 days
12.4
TCGA-RC-A6M4-01A
0 years, female, white, stage:Stage IIIA, alive, 22 days
12.4
TCGA-GJ-A6C0-01A
0 years, female, white, stage:Stage II, dead, 31 days
12.3
TCGA-5R-AAAM-01A
0 years, female, white, stage:Stage II, dead, 46 days
12.3
TCGA-DD-A73C-01A
0 years, female, white, stage:Stage IIIA, alive, 701 days
12.2
TCGA-DD-AAEE-01A
0 years, male, asian, stage:Stage I, alive, 810 days
12.2
TCGA-DD-A73F-01A
0 years, female, white, stage:Stage I, alive, 1085 days
12.1
TCGA-RC-A6M5-01A
0 years, female, white, stage:Stage IVA, alive, 15 days
12.1
TCGA-DD-AACK-01A
0 years, male, asian, stage:Stage I, alive, 9 days
12.1
TCGA-DD-A3A8-01A
0 years, male, white, stage:Stage II, dead, 11 days
12.0
TCGA-G3-A3CH-01A
0 years, male, asian, stage:Stage IIIA, alive, 780 days
12.0
TCGA-DD-AAE2-01A
0 years, male, asian, stage:Stage I, alive, 638 days
12.0
TCGA-G3-A5SI-01A
0 years, male, asian, stage:Stage II, dead, 768 days
11.7
TCGA-ED-A459-01A
0 years, male, asian, stage:Stage II, alive, 910 days
11.7
TCGA-CC-A5UD-01A
0 years, male, asian, stage:Stage IIIA, dead, 304 days
11.7
TCGA-DD-A4NE-01A
0 years, female, white, stage:Stage IIIA, dead, 660 days
11.7
TCGA-EP-A3RK-01A
0 years, male, white, stage:Stage IIIA, alive, 363 days
11.7
TCGA-CC-A7IL-01A
0 years, male, asian, stage:Stage IIIA, dead, 278 days
11.6
TCGA-DD-AADK-01A
0 years, female, asian, stage:Stage II, alive, 1049 days
11.6
TCGA-DD-A3A4-01A
0 years, male, white, stage:Stage IIIA, dead, 612 days
11.6
TCGA-HP-A5MZ-01A
0 years, male, stage:Stage I, dead, 91 days
11.3
TCGA-2Y-A9GT-01A
0 years, male, white, stage:Stage I, dead, 1624 days
11.3
TCGA-DD-AAE9-01A
0 years, male, asian, stage:Stage I, alive, 722 days
11.2
TCGA-ZS-A9CG-01A
0 years, male, white, stage:Stage II, alive, 341 days
11.2
TCGA-DD-AAD8-01A
0 years, female, asian, stage:Stage I, alive, 1219 days
11.2
TCGA-MI-A75G-01A
0 years, male, white, stage:Stage II, alive, 698 days
11.1
TCGA-DD-A4NI-01A
0 years, male, white, stage:Stage II, alive, 816 days
11.1
TCGA-3K-AAZ8-01A
0 years, male, black or african american, stage:Stage IIIB, alive, 396 days
11.0
TCGA-KR-A7K2-01A
0 years, male, white, stage:Stage I, alive, 829 days
11.0
TCGA-RC-A6M6-01A
0 years, male, white, stage:Stage II, alive, 9 days
10.9
TCGA-MR-A8JO-01A
0 years, male, white, stage:Stage I, alive, 330 days
10.8
TCGA-BC-A10W-01A
0 years, male, asian, stage:'--, dead, 91 days
10.8
TCGA-DD-A73A-01A
0 years, male, white, stage:Stage I, alive, 728 days
10.8
TCGA-BC-A10T-01A
0 years, male, white, stage:'--, dead, 837 days
10.8
TCGA-DD-AACB-01A
0 years, female, asian, stage:Stage I, alive, 2324 days
10.7
TCGA-DD-AAEA-01A
0 years, male, asian, stage:Stage I, alive, 575 days
10.7
TCGA-BW-A5NO-01A
0 years, male, black or african american, stage:Stage IIIA, alive, 20 days
10.6
TCGA-UB-A7MF-01A
0 years, male, white, stage:Stage IIIA, dead, 214 days
10.6
TCGA-G3-A5SK-01A
0 years, male, white, stage:Stage I, alive, 744 days
10.5
TCGA-G3-A5SJ-01A
0 years, male, white, stage:Stage I, alive, 698 days
10.3
TCGA-MI-A75E-01A
0 years, male, white, stage:Stage IIIC, alive, 507 days
10.3
TCGA-WX-AA46-01A
0 years, male, white, stage:Stage II, alive, 756 days
10.2
TCGA-ED-A7PZ-01A
0 years, male, asian, stage:Stage II, alive, 6 days
10.1
TCGA-DD-AADM-01A
0 years, male, asian, stage:Stage II, dead, 12 days
10.1
TCGA-BC-A10Z-01A
0 years, female, white, stage:Stage I, dead, 34 days
9.9
TCGA-FV-A4ZQ-01A
0 years, male, white, stage:Stage I, alive, 12 days
9.8
TCGA-CC-A7IF-01A
0 years, male, asian, stage:Stage IIIA, dead, 649 days
9.8
TCGA-BC-A10Y-01A
0 years, male, white, stage:'--, dead, 711 days
9.7
TCGA-DD-A1EB-01A
0 years, female, stage:Stage I, alive, 2017 days
9.6
TCGA-DD-AACF-01A
0 years, male, asian, stage:Stage I, dead, 365 days
9.6
TCGA-DD-A1ED-01A
0 years, male, white, stage:Stage I, alive, 2301 days
9.5
TCGA-K7-A5RF-01A
0 years, male, white, stage:Stage I, alive, 631 days
9.5
TCGA-BC-A217-01A
0 years, female, white, stage:Stage II, dead, 1397 days
9.3
TCGA-NI-A8LF-01A
0 years, male, white, stage:Stage I, alive, 799 days
9.3
TCGA-DD-A39Y-01A
0 years, male, asian, stage:Stage I, dead, 171 days
9.2
TCGA-G3-A25Z-01A
0 years, male, asian, stage:Stage I, alive, 655 days
9.2
TCGA-DD-A4NL-01A
0 years, male, white, stage:Stage I, alive, 1711 days
9.2
TCGA-ED-A7XO-01A
0 years, male, asian, stage:Stage IIIA, alive, 427 days
9.1
TCGA-G3-A25V-01A
0 years, male, white, stage:Stage I, alive, 860 days
9.1
TCGA-RC-A7SF-01A
0 years, male, asian, stage:Stage I, alive, 579 days
9.1
TCGA-DD-A3A7-01A
0 years, male, stage:Stage IIIB, dead, 419 days
9.0
TCGA-DD-AAE7-01A
0 years, male, asian, stage:Stage I, alive, 644 days
9.0
TCGA-EP-A3JL-01A
0 years, male, white, stage:Stage I, alive, 303 days
9.0
TCGA-DD-A3A6-01A
0 years, female, white, stage:Stage II, dead, 3258 days
9.0
TCGA-2Y-A9GZ-01A
0 years, female, white, stage:Stage II, dead, 848 days
8.9
TCGA-2Y-A9GY-01A
0 years, female, white, stage:Stage II, dead, 757 days
8.8
TCGA-G3-A25S-01A
0 years, male, white, stage:Stage I, dead, 416 days
8.7
TCGA-G3-A7M8-01A
0 years, male, asian, stage:Stage I, alive, 430 days
8.6
TCGA-DD-AADU-01A
0 years, male, asian, stage:Stage II, alive, 554 days
8.5
TCGA-RC-A7SB-01A
0 years, male, asian, stage:Stage II, alive, 588 days
8.4
TCGA-DD-AAEI-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
8.4
TCGA-FV-A2QQ-01A
0 years, male, white, stage:Stage I, alive, 729 days
8.3
TCGA-K7-A6G5-01A
0 years, male, white, stage:Stage I, alive, 512 days
8.0
TCGA-KR-A7K8-01A
0 years, male, stage:Stage I, alive, 906 days
8.0
TCGA-BC-A5W4-01A
0 years, male, white, stage:Stage IIIA, dead, 547 days
8.0
TCGA-2Y-A9H9-01A
0 years, male, white, stage:Stage I, alive, 697 days
7.9
TCGA-DD-AADJ-01A
0 years, female, asian, stage:Stage I, alive, 1066 days
7.9
TCGA-DD-AACC-01A
0 years, male, asian, stage:Stage I, dead, 1685 days
7.9
TCGA-DD-AAC9-01A
0 years, male, asian, stage:Stage I, alive, 347 days
7.8
TCGA-BC-A110-01A
0 years, female, black or african american, stage:'--, dead, 2116 days
7.8
TCGA-5C-AAPD-01A
0 years, male, asian, stage:Stage II, alive, 20 days
7.7
TCGA-G3-A25T-01A
0 years, female, white, stage:Stage IIIA, alive, 1553 days
7.7
TCGA-MR-A520-01A
0 years, male, white, stage:Stage I, alive, 229 days
7.7
TCGA-G3-A7M7-01A
0 years, male, white, stage:Stage I, alive, 361 days
7.7
TCGA-G3-A3CI-01A
0 years, male, white, stage:Stage I, alive, 180 days
7.6
TCGA-DD-A119-01A
0 years, male, asian, stage:Stage IV, dead, 223 days
7.5
TCGA-DD-AACJ-01A
0 years, male, asian, stage:Stage II, alive, 2102 days
7.5
TCGA-DD-A3A1-01A
0 years, male, stage:Stage IIIA, dead, 233 days
7.4
TCGA-EP-A2KA-01A
0 years, female, white, stage:Stage IIIA, dead, 627 days
7.4
TCGA-DD-A39Z-01A
0 years, female, stage:Stage II, dead, 601 days
7.4
TCGA-CC-A7II-01A
0 years, male, asian, stage:Stage IIIA, alive, 399 days
7.2
TCGA-KR-A7K7-01A
0 years, female, white, stage:Stage II, alive, 951 days
7.2
TCGA-BC-A10S-01A
0 years, male, white, stage:'--, dead, 1423 days
7.0
TCGA-DD-AAVX-01A
0 years, male, asian, stage:Stage II, alive, 1718 days
7.0
TCGA-UB-A7MB-01A
0 years, male, white, stage:Stage II, alive, 601 days
6.7
TCGA-DD-A39V-01A
0 years, male, white, stage:Stage II, dead, 643 days
6.7
TCGA-G3-AAV6-01A
0 years, female, white, stage:Stage IIIA, dead, 65 days
6.6
TCGA-2Y-A9H4-01A
0 years, male, black or african american, stage:Stage I, alive, 1452 days
6.5
TCGA-MI-A75H-01A
0 years, male, white, stage:'--, alive, 747 days
6.5
TCGA-BC-A69I-01A
0 years, male, white, stage:Stage I, alive, 387 days
6.4
TCGA-G3-AAV0-01A
0 years, male, asian, stage:Stage I, alive, 476 days
6.4
TCGA-DD-A3A3-01A
0 years, male, asian, stage:Stage I, dead, 535 days
6.4
TCGA-DD-AAD6-01A
0 years, male, asian, stage:Stage IIIA, alive, 672 days
6.2
TCGA-LG-A9QD-01A
0 years, male, white, stage:Stage IIIA, alive, 366 days
6.1
TCGA-NI-A4U2-01A
0 years, male, white, stage:Stage IIIA, dead, 1791 days
6.0
TCGA-G3-A7M5-01A
0 years, male, asian, stage:Stage I, alive, 447 days
6.0
TCGA-WQ-AB4B-01A
0 years, male, white, stage:Stage II, alive, 395 days
5.8
TCGA-DD-AADQ-01A
0 years, male, asian, stage:Stage II, alive, 436 days
5.7
TCGA-WX-AA47-01A
0 years, female, white, stage:Stage IIIA, dead, 556 days
5.7
TCGA-G3-A25X-01A
0 years, male, asian, stage:Stage II, alive, 1779 days
5.7
TCGA-DD-A4NP-01A
0 years, male, white, stage:Stage I, alive, 3308 days
5.7
TCGA-DD-A3A2-01A
0 years, female, white, stage:Stage I, dead, 2131 days
5.5
TCGA-ES-A2HT-01A
0 years, male, black or african american, stage:Stage I, dead, 438 days
5.5
TCGA-G3-A25U-01A
0 years, female, asian, stage:Stage I, alive, 1636 days
5.3
TCGA-BD-A2L6-01A
0 years, male, white, stage:'--, alive, 1363 days
5.2
TCGA-DD-AAEB-01A
0 years, male, asian, stage:Stage I, alive, 478 days
5.2
TCGA-2Y-A9H3-01A
0 years, male, white, stage:Stage II, alive, 1516 days
5.2
TCGA-DD-A3A5-01A
0 years, female, white, stage:Stage III, dead, 3125 days
4.8
TCGA-DD-AACO-01A
0 years, male, asian, stage:Stage I, alive, 1876 days
4.8
TCGA-DD-AADO-01A
0 years, male, asian, stage:Stage I, alive, 453 days
4.8
TCGA-BC-A69H-01A
0 years, male, white, stage:Stage II, alive, 444 days
4.6
TCGA-DD-AAVU-01A
0 years, male, asian, stage:Stage II, alive, 2202 days
4.6
TCGA-DD-A73G-01A
0 years, female, white, stage:Stage I, alive, 3478 days
4.5
TCGA-G3-A3CJ-01A
0 years, male, american indian or alaska native, stage:Stage II, alive, 594 days
4.5
TCGA-DD-A39X-01A
0 years, female, white, stage:Stage I, dead, 1694 days
4.5
TCGA-DD-AACG-01A
0 years, male, asian, stage:Stage II, dead, 469 days
4.4
TCGA-DD-A116-01A
0 years, male, asian, stage:Stage IIIA, dead, 1622 days
4.4
TCGA-DD-AAE3-01A
0 years, male, asian, stage:Stage I, alive, 566 days
4.3
TCGA-FV-A495-01A
0 years, female, white, stage:Stage II, alive, 1 days
4.1
TCGA-CC-5259-01A
0 years, female, asian, stage:Stage IIIC, alive, 250 days
4.0
TCGA-DD-AADF-01A
0 years, female, asian, stage:Stage I, dead, 115 days
3.9
TCGA-2Y-A9H1-01A
0 years, male, white, stage:Stage I, dead, 1229 days
3.5
TCGA-G3-AAUZ-01A
0 years, male, stage:Stage I, alive, 480 days
3.1
TCGA-DD-AACD-01A
0 years, male, asian, stage:Stage I, dead, 381 days
3.0
TCGA-DD-AADN-01A
0 years, male, asian, stage:Stage I, alive, 898 days
2.7
TCGA-ES-A2HS-01A
0 years, male, white, stage:Stage I, dead, 688 days
2.6
TCGA-CC-A123-01A
0 years, female, asian, stage:Stage IIIA, alive, 219 days
2.4
TCGA-DD-AADS-01A
0 years, male, asian, stage:Stage I, alive, 474 days
2.3
TCGA-DD-AAE4-01A
0 years, female, asian, stage:Stage I, alive, 608 days
1.8
TCGA-FV-A4ZP-01A
0 years, male, white, stage:Stage IIIA, dead, 2486 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
WDR26 is not prognostic in Liver Hepatocellular Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
22.9
Number of samples
231
Samples
Sample
Description
TPM
DO23524
0 years, female, NA, stage:2, alive, 1050 days
62.2
DO45251
0 years, female, NA, stage:2, alive, 900 days
60.2
DO45279
0 years, male, NA, stage:3, alive, 1290 days
58.3
DO45185
0 years, male, NA, stage:2, alive, 600 days
54.0
DO45187
0 years, female, NA, stage:1, alive, 1260 days
48.9
DO48746
0 years, male, NA, stage:3, alive, 570 days
47.8
DO45121
0 years, male, NA, stage:3, alive, 1530 days
46.4
DO48704
0 years, female, NA, stage:3, alive, 750 days
46.1
DO45213
0 years, male, NA, stage:1, alive, 1200 days
46.0
DO45123
0 years, female, NA, stage:2, dead, 570 days
45.5
DO50844
0 years, male, NA, stage:4, alive, 300 days
44.7
DO45203
0 years, female, NA, stage:2, alive, 1170 days
44.5
DO45275
0 years, male, NA, stage:3, dead, 10 days
43.6
DO48733
0 years, male, NA, stage:2, alive, 600 days
42.2
DO45243
0 years, female, NA, stage:3, alive, 930 days
41.8
DO50820
0 years, female, NA, stage:3, alive, 510 days
40.2
DO45189
0 years, female, NA, stage:2, alive, 1200 days
40.2
DO50793
0 years, male, NA, stage:4, alive, 540 days
39.0
DO23528
0 years, female, NA, stage:2, alive, 1020 days
38.5
DO48736
0 years, female, NA, stage:1, alive, 600 days
38.4
DO45159
0 years, male, NA, stage:3, alive, 1470 days
35.8
DO45239
0 years, male, NA, stage:2, alive, 870 days
35.7
DO45137
0 years, male, NA, stage:1, alive, 1320 days
35.4
DO50799
0 years, female, NA, stage:2, alive, 540 days
35.4
DO45277
0 years, male, NA, stage:3, alive, 600 days
35.1
DO45273
0 years, male, NA, stage:2, alive, 480 days
34.5
DO50811
0 years, male, NA, stage:1, alive, 450 days
34.1
DO45247
0 years, female, NA, stage:2, alive, 210 days
33.8
DO45153
0 years, female, NA, stage:2, alive, 1380 days
33.3
DO48720
0 years, female, NA, stage:2, alive, 570 days
32.8
DO45205
0 years, female, NA, stage:2, dead, 90 days
32.7
DO45259
0 years, male, NA, stage:3, alive, 330 days
32.6
DO45141
0 years, male, NA, stage:2, alive, 1320 days
32.2
DO45179
0 years, female, NA, stage:2, alive, 600 days
32.1
DO45209
0 years, male, NA, stage:4, alive, 1350 days
32.1
DO50778
0 years, male, NA, stage:4, alive, 630 days
31.9
DO45163
0 years, male, NA, stage:2, alive, 960 days
31.8
DO45223
0 years, male, NA, stage:4, alive, 1020 days
31.7
DO45139
0 years, male, NA, stage:3, alive, 1320 days
31.7
DO23518
0 years, male, NA, stage:2, alive, 1320 days
31.4
DO23543
0 years, male, NA, stage:2, alive, 1020 days
31.0
DO45249
0 years, male, NA, stage:1, alive, 630 days
30.5
DO45245
0 years, female, NA, stage:2, dead, 240 days
30.0
DO50791
0 years, female, NA, stage:1, dead, 480 days
29.8
DO45103
0 years, male, NA, stage:3, alive, 450 days
29.8
DO50850
0 years, male, NA, stage:3, alive, 720 days
29.5
DO23512
0 years, male, NA, stage:1, alive, 1260 days
29.5
DO23513
0 years, male, NA, stage:3, alive, 1200 days
29.1
DO45257
0 years, male, NA, stage:3, alive, 810 days
29.0
DO45207
0 years, male, NA, stage:1, alive, 1050 days
28.6
DO50857
0 years, male, NA, stage:2, alive, 210 days
28.6
DO23529
0 years, male, NA, stage:4, alive, 930 days
27.9
DO48757
0 years, female, NA, stage:3, alive, 480 days
27.8
DO45283
0 years, male, NA, stage:3, alive, 510 days
27.7
DO45092
0 years, male, NA, stage:4, dead, 1200 days
27.7
DO45281
0 years, male, NA, stage:4, alive, 750 days
27.6
DO45119
0 years, male, NA, stage:3, dead, 510 days
27.5
DO23547
0 years, male, NA, stage:1, alive, 1020 days
27.2
DO50802
0 years, male, NA, stage:2, alive, 930 days
27.2
DO45267
0 years, male, NA, stage:3, dead, 570 days
27.1
DO45155
0 years, male, NA, stage:2, alive, 2160 days
27.0
DO23542
0 years, male, NA, stage:3, alive, 960 days
26.9
DO45131
0 years, male, NA, stage:4, dead, 360 days
26.9
DO45099
0 years, male, NA, stage:3, alive, 1590 days
26.5
DO227801
0 years, female, NA, stage:1, alive, 660 days
26.5
DO45117
0 years, female, NA, stage:2, dead, 1110 days
26.5
DO23535
0 years, male, NA, stage:1, alive, 960 days
26.3
DO45231
0 years, male, NA, stage:2, alive, 930 days
26.1
DO45303
0 years, female, NA, stage:3, alive, 990 days
25.9
DO23523
0 years, male, NA, stage:3, alive, 1080 days
25.9
DO23515
0 years, male, NA, stage:2, alive, 1230 days
25.8
DO45157
0 years, male, NA, stage:2, alive, 1980 days
25.7
DO48751
0 years, male, NA, stage:2, dead, 480 days
25.6
DO23548
0 years, female, NA, stage:1, alive, 840 days
25.6
DO45183
0 years, female, NA, stage:2, dead, 570 days
25.6
DO48737
0 years, male, NA, stage:1, alive, 720 days
25.4
DO50815
0 years, male, NA, stage:3, alive, 150 days
25.1
DO50800
0 years, male, NA, stage:2, alive, 510 days
24.8
DO45287
0 years, male, NA, stage:1, alive, 390 days
24.6
DO23545
0 years, male, NA, stage:2, dead, 570 days
24.6
DO23546
0 years, male, NA, stage:2, alive, 1050 days
24.5
DO48697
0 years, female, NA, stage:2, dead, 810 days
24.5
DO45265
0 years, male, NA, stage:3, alive, 1020 days
24.5
DO48732
0 years, male, NA, stage:3, alive, 630 days
24.4
DO48706
0 years, male, NA, stage:2, alive, 870 days
24.4
DO45227
0 years, female, NA, stage:2, alive, 1020 days
24.4
DO23510
0 years, female, NA, stage:2, alive, 870 days
24.3
DO50832
0 years, male, NA, stage:3, alive, 90 days
24.1
DO48700
0 years, female, NA, stage:2, alive, 810 days
24.0
DO23509
0 years, male, NA, stage:3, dead, 780 days
24.0
DO50859
0 years, male, NA, stage:2, alive, 180 days
23.5
DO45165
0 years, male, NA, stage:2, alive, 690 days
23.5
DO48725
0 years, male, NA, stage:1, alive, 780 days
23.3
DO48682
0 years, female, NA, stage:3, dead, 120 days
23.3
DO23530
0 years, male, NA, stage:4, dead, 180 days
22.9
DO48701
0 years, male, NA, stage:2, alive, 780 days
22.9
DO23552
0 years, female, NA, stage:1, alive, 810 days
22.8
DO45289
0 years, female, NA, stage:3, alive, 360 days
22.6
DO50783
0 years, male, NA, stage:3, alive, 480 days
22.6
DO23526
0 years, male, NA, stage:3, alive, 1050 days
22.6
DO23533
0 years, male, NA, stage:2, alive, 900 days
22.5
DO45107
0 years, female, NA, stage:2, alive, 1710 days
22.4
DO45129
0 years, male, NA, stage:3, alive, 1470 days
22.4
DO48728
0 years, female, NA, stage:2, alive, 150 days
22.3
DO48672
0 years, male, NA, stage:2, alive, 450 days
22.2
DO23539
0 years, male, NA, stage:1, alive, 1110 days
22.0
DO48761
0 years, male, NA, stage:2, alive, 870 days
22.0
DO45241
0 years, male, NA, stage:1, alive, 1080 days
21.8
DO45201
0 years, male, NA, stage:1, alive, 900 days
21.6
DO48743
0 years, female, NA, stage:2, alive, 570 days
21.6
DO23549
0 years, male, NA, stage:3, alive, 990 days
21.5
DO23516
0 years, male, NA, stage:3, dead, 20 days
21.4
DO50840
0 years, male, NA, stage:2, alive, 330 days
21.3
DO48730
0 years, female, NA, stage:2, alive, 630 days
21.3
DO50855
0 years, male, NA, stage:2, alive, 570 days
21.3
DO23544
0 years, male, NA, stage:2, alive, 960 days
21.1
DO50803
0 years, female, NA, stage:1, alive, 540 days
20.9
DO45135
0 years, male, NA, stage:1, alive, 1410 days
20.8
DO45171
0 years, male, NA, stage:3, alive, 600 days
20.7
DO48695
0 years, male, NA, stage:2, alive, 720 days
20.7
DO23538
0 years, male, NA, stage:2, alive, 450 days
20.5
DO45113
0 years, male, NA, stage:3, alive, 1560 days
20.4
DO50774
0 years, female, NA, stage:2, alive, 720 days
20.3
DO23527
0 years, male, NA, stage:1, alive, 1050 days
20.3
DO45235
0 years, female, NA, stage:1, alive, 900 days
20.3
DO23514
0 years, male, NA, stage:2, alive, 1290 days
20.1
DO45237
0 years, male, NA, stage:2, alive, 900 days
19.9
DO45305
0 years, male, NA, stage:4, alive, 300 days
19.9
DO23541
0 years, male, NA, stage:2, alive, 930 days
19.8
DO50829
0 years, male, NA, stage:3, alive, 570 days
19.7
DO50804
0 years, male, NA, stage:2, alive, 720 days
19.7
DO45177
0 years, female, NA, stage:3, alive, 1260 days
19.6
DO45297
0 years, female, NA, stage:4, dead, 1260 days
19.5
DO45145
0 years, male, NA, stage:3, dead, 60 days
19.5
DO48721
0 years, female, NA, stage:1, alive, 900 days
19.3
DO45219
0 years, male, NA, stage:2, alive, 1080 days
19.2
DO45091
0 years, male, NA, stage:2, dead, 1320 days
19.2
DO50798
0 years, male, NA, stage:3, dead, 30 days
19.0
DO45095
0 years, male, NA, stage:2, alive, 1620 days
18.9
DO45199
0 years, female, NA, stage:2, alive, 1350 days
18.9
DO45096
0 years, male, NA, stage:2, dead, 1290 days
18.7
DO45263
0 years, male, NA, stage:3, dead, 270 days
18.6
DO45133
0 years, male, NA, stage:3, dead, 660 days
18.6
DO50822
0 years, male, NA, stage:2, alive, 510 days
18.6
DO48712
0 years, male, NA, stage:2, alive, 810 days
18.4
DO23536
0 years, male, NA, stage:2, alive, 930 days
18.2
DO45301
0 years, male, NA, stage:2, dead, 1440 days
18.2
DO45269
0 years, male, NA, stage:3, alive, 750 days
18.2
DO45253
0 years, male, NA, stage:2, alive, 870 days
18.1
DO45191
0 years, female, NA, stage:2, alive, 1200 days
18.0
DO45299
0 years, female, NA, stage:1, alive, 1440 days
18.0
DO45217
0 years, female, NA, stage:3, dead, 270 days
17.9
DO48760
0 years, female, NA, stage:2, alive, 690 days
17.8
DO45233
0 years, male, NA, stage:3, alive, 900 days
17.8
DO45215
0 years, male, NA, stage:2, alive, 1170 days
17.7
DO48679
0 years, male, NA, stage:2, alive, 1200 days
17.7
DO45167
0 years, male, NA, stage:2, dead, 1440 days
17.6
DO45094
0 years, male, NA, stage:3, alive, 1650 days
17.6
DO45175
0 years, male, NA, stage:2, alive, 1140 days
17.5
DO48677
0 years, male, NA, stage:3, alive, 1140 days
17.4
DO45127
0 years, male, NA, stage:3, dead, 420 days
17.3
DO45307
0 years, female, NA, stage:4, dead, 240 days
17.3
DO45105
0 years, male, NA, stage:1, alive, 1680 days
17.0
DO227643
0 years, male, NA, stage:2, alive, 1260 days
16.8
DO50813
0 years, male, NA, stage:2, alive, 420 days
16.7
DO45193
0 years, female, NA, stage:4, dead, 120 days
16.5
DO23537
0 years, male, NA, stage:2, dead, 900 days
16.4
DO50825
0 years, male, NA, stage:2, alive, 390 days
16.3
DO45211
0 years, male, NA, stage:3, alive, 240 days
16.2
DO23521
0 years, male, NA, stage:3, alive, 1110 days
16.2
DO45173
0 years, male, NA, stage:3, alive, 1170 days
16.1
DO23531
0 years, female, NA, stage:3, alive, 900 days
15.9
DO48716
0 years, male, NA, stage:2, alive, 720 days
15.8
DO50845
0 years, male, NA, stage:3, alive, 210 days
15.8
DO50817
0 years, male, NA, stage:2, alive, 390 days
15.7
DO23550
0 years, male, NA, stage:1, alive, 990 days
15.7
DO50776
0 years, male, NA, stage:1, alive, 690 days
15.6
DO50787
0 years, male, NA, stage:3, alive, 480 days
15.6
DO50809
0 years, male, NA, stage:3, dead, 720 days
15.5
DO48741
0 years, male, NA, stage:3, alive, 240 days
15.4
DO45115
0 years, male, NA, stage:2, alive, 840 days
15.4
DO45221
0 years, female, NA, stage:4, dead, 390 days
15.3
DO50805
0 years, male, NA, stage:2, alive, 690 days
15.3
DO48693
0 years, male, NA, stage:2, alive, 900 days
15.2
DO50789
0 years, female, NA, stage:2, alive, 570 days
15.2
DO48717
0 years, male, NA, stage:4, dead, 180 days
15.1
DO45197
0 years, male, NA, stage:2, alive, 1170 days
15.1
DO50808
0 years, male, NA, stage:2, alive, 570 days
15.0
DO45195
0 years, male, NA, stage:1, alive, 390 days
14.8
DO45181
0 years, female, NA, stage:2, alive, 1200 days
14.7
DO48723
0 years, male, NA, stage:1, alive, 600 days
14.6
DO50807
0 years, male, NA, stage:1, alive, 540 days
14.6
DO48719
0 years, male, NA, stage:2, alive, 690 days
14.5
DO48681
0 years, male, NA, stage:2, alive, 900 days
14.3
DO50819
0 years, female, NA, stage:2, alive, 510 days
14.3
DO45125
0 years, male, NA, stage:3, alive, 1680 days
14.3
DO45169
0 years, male, NA, stage:3, alive, 1350 days
14.0
DO23551
0 years, male, NA, stage:3, dead, 150 days
13.9
DO45161
0 years, male, NA, stage:2, dead, 540 days
13.8
DO48747
0 years, male, NA, stage:3, alive, 540 days
13.5
DO45225
0 years, male, NA, stage:1, alive, 1050 days
13.5
DO23508
0 years, female, NA, stage:2, alive, 390 days
13.4
DO23525
0 years, male, NA, stage:4, alive, 1050 days
13.3
DO23534
0 years, male, NA, stage:2, alive, 840 days
13.2
DO45229
0 years, male, NA, stage:1, alive, 990 days
13.1
DO23517
0 years, male, NA, stage:2, alive, 1200 days
13.1
DO45255
0 years, male, NA, stage:3, alive, 720 days
13.1
DO45143
0 years, male, NA, stage:3, alive, 1290 days
13.0
DO45261
0 years, male, NA, stage:3, alive, 990 days
12.7
DO23540
0 years, male, NA, stage:1, alive, 750 days
12.3
DO50816
0 years, male, NA, stage:2, alive, 390 days
12.2
DO50818
0 years, male, NA, stage:2, alive, 510 days
12.2
DO45093
0 years, male, NA, stage:2, dead, 720 days
11.7
DO45111
0 years, male, NA, stage:2, alive, 1590 days
11.7
DO50785
0 years, male, NA, stage:4, dead, 90 days
11.6
DO45097
0 years, male, NA, stage:3, alive, 1620 days
11.6
DO45101
0 years, male, NA, stage:2, alive, 1680 days
11.4
DO48759
0 years, male, NA, stage:3, alive, 720 days
11.1
DO48742
0 years, male, NA, stage:2, alive, 600 days
11.1
DO23519
0 years, male, NA, stage:3, alive, 630 days
11.0
DO23532
0 years, female, NA, stage:1, alive, 960 days
10.9
DO48727
0 years, female, NA, stage:2, dead, 390 days
10.6
DO50806
0 years, male, NA, stage:4, alive, 540 days
10.5
DO48715
0 years, female, NA, stage:2, dead, 690 days
10.1
DO50814
0 years, male, NA, stage:3, alive, 420 days
9.4
DO45149
0 years, female, NA, stage:2, alive, 1260 days
9.2
DO45109
0 years, male, NA, stage:2, alive, 1590 days
9.1
DO45285
0 years, male, NA, stage:3, alive, 480 days
9.0
DO48674
0 years, male, NA, stage:2, alive, 1260 days
6.9
DO50839
0 years, female, NA, stage:3, alive, 330 days
6.6
DO23511
0 years, female, NA, stage:3, dead, 180 days
6.5
Show allShow less
LIVER HEPATOCELLULAR CARCINOMA - Protein relative expression (CPTAC)
Number of samples
330
Samples
Sample ID
Sample type
nRPX
147
Tumor
0.9
533
Tumor
0.8
257
Tumor
0.7
125
Tumor
0.7
283
Tumor
0.7
393
Tumor
0.7
743
Tumor
0.7
685
Tumor
0.6
131
Tumor
0.6
491
Tumor
0.6
975
Tumor
0.5
343
Tumor
0.5
553
Tumor
0.5
527
Tumor
0.4
863
Tumor
0.4
1025
Tumor
0.4
141
Tumor
0.4
745
Tumor
0.4
881
Tumor
0.4
271
Tumor
0.4
221
Tumor
0.4
715
Tumor
0.4
951
Tumor
0.4
777
Tumor
0.4
445
Tumor
0.4
877
Tumor
0.4
865
Tumor
0.3
471
Tumor
0.3
313
Tumor
0.3
375
Tumor
0.3
515
Tumor
0.3
357
Tumor
0.3
443
Tumor
0.3
1031
Tumor
0.3
277
Tumor
0.3
917
Tumor
0.3
823
Tumor
0.3
213
Tumor
0.3
231
Tumor
0.3
817
Tumor
0.3
497
Tumor
0.3
297
Tumor
0.3
135
Tumor
0.3
493
Tumor
0.3
713
Tumor
0.3
385
Tumor
0.2
953
Tumor
0.2
145
Tumor
0.2
473
Tumor
0.2
573
Tumor
0.2
963
Tumor
0.2
721
Tumor
0.2
285
Tumor
0.2
355
Tumor
0.2
977
Tumor
0.2
483
Tumor
0.2
351
Tumor
0.2
943
Tumor
0.2
327
Tumor
0.2
911
Tumor
0.2
387
Tumor
0.2
557
Tumor
0.2
983
Tumor
0.2
391
Tumor
0.2
741
Tumor
0.2
525
Tumor
0.2
921
Tumor
0.2
451
Tumor
0.2
523
Tumor
0.1
697
Tumor
0.1
925
Tumor
0.1
537
Tumor
0.1
461
Tumor
0.1
851
Tumor
0.1
433
Tumor
0.1
367
Tumor
0.1
923
Tumor
0.1
1043
Tumor
0.1
425
Tumor
0.1
965
Tumor
0.1
857
Tumor
0.1
1013
Tumor
0.1
671
Tumor
0.1
432
Normal
0.1
434
Normal
0.1
137
Tumor
0.1
563
Tumor
0.1
641
Tumor
0.1
217
Tumor
0.1
1015
Tumor
0.1
412
Normal
0.1
188
Normal
0.1
411
Tumor
0.1
132
Normal
0.1
365
Tumor
0.1
191
Tumor
0.1
361
Tumor
0.1
648
Normal
0.1
647
Tumor
0.1
394
Normal
0.1
416
Normal
0.1
342
Normal
0.1
517
Tumor
0.1
627
Tumor
0.1
127
Tumor
0.1
124
Normal
0.1
185
Tumor
0.1
956
Normal
0.1
1027
Tumor
0.1
957
Tumor
0.1
861
Tumor
0.1
545
Tumor
0.0
924
Normal
0.0
261
Tumor
0.0
142
Normal
0.0
286
Normal
0.0
916
Normal
0.0
1021
Tumor
0.0
223
Tumor
0.0
211
Tumor
0.0
785
Tumor
0.0
663
Tumor
0.0
492
Normal
0.0
567
Tumor
0.0
864
Normal
0.0
463
Tumor
0.0
383
Tumor
0.0
436
Normal
0.0
695
Tumor
0.0
488
Normal
0.0
738
Normal
0.0
388
Normal
0.0
421
Tumor
0.0
487
Tumor
0.0
414
Normal
0.0
366
Normal
0.0
396
Normal
0.0
724
Normal
0.0
386
Normal
0.0
446
Normal
0.0
186
Normal
0.0
722
Normal
0.0
415
Tumor
0.0
268
Normal
0.0
331
Tumor
0.0
332
Normal
0.0
1041
Tumor
0.0
328
Normal
0.0
665
Tumor
0.0
352
Normal
0.0
1032
Normal
0.0
311
Tumor
0.0
672
Normal
0.0
447
Tumor
0.0
262
Normal
0.0
227
Tumor
0.0
353
Tumor
0.0
128
Normal
0.0
395
Tumor
0.0
742
Normal
0.0
554
Normal
0.0
484
Normal
0.0
513
Tumor
0.0
955
Tumor
0.0
376
Normal
0.0
364
Normal
0.0
431
Tumor
0.0
162
Normal
0.0
477
Tumor
0.0
874
Normal
0.0
664
Normal
0.0
444
Normal
0.0
278
Normal
0.0
222
Normal
0.0
534
Normal
0.0
368
Normal
0.0
558
Normal
0.0
146
Normal
0.0
494
Normal
0.0
737
Tumor
0.0
528
Normal
0.0
422
Normal
0.0
214
Normal
0.0
862
Normal
0.0
635
Tumor
0.0
224
Normal
0.0
467
Tumor
0.0
498
Normal
0.0
813
Tumor
0.0
392
Normal
0.0
314
Normal
0.0
535
Tumor
0.0
976
Normal
0.0
617
Tumor
0.0
312
Normal
0.0
878
Normal
0.0
915
Tumor
-0.1
126
Normal
-0.1
852
Normal
-0.1
642
Normal
-0.1
914
Normal
-0.1
284
Normal
-0.1
938
Normal
-0.1
571
Tumor
-0.1
111
Normal
-0.1
481
Tumor
-0.1
171
Tumor
-0.1
358
Normal
-0.1
662
Normal
-0.1
546
Normal
-0.1
362
Normal
-0.1
723
Tumor
-0.1
967
Tumor
-0.1
1042
Normal
-0.1
564
Normal
-0.1
966
Normal
-0.1
455
Tumor
-0.1
474
Normal
-0.1
978
Normal
-0.1
187
Tumor
-0.1
113
Tumor
-0.1
1022
Normal
-0.1
114
Normal
-0.1
922
Normal
-0.1
423
Tumor
-0.1
426
Normal
-0.1
232
Normal
-0.1
228
Normal
-0.1
267
Tumor
-0.1
428
Normal
-0.1
1016
Normal
-0.1
918
Normal
-0.1
427
Tumor
-0.1
1014
Normal
-0.1
123
Tumor
-0.1
913
Tumor
-0.1
172
Normal
-0.1
538
Normal
-0.1
716
Normal
-0.1
661
Tumor
-0.1
868
Normal
-0.1
1028
Normal
-0.1
212
Normal
-0.1
866
Normal
-0.1
666
Normal
-0.1
112
Tumor
-0.1
628
Normal
-0.1
616
Normal
-0.1
1026
Normal
-0.1
136
Normal
-0.1
472
Normal
-0.1
982
Normal
-0.1
954
Normal
-0.1
984
Normal
-0.1
1044
Normal
-0.1
196
Normal
-0.1
138
Normal
-0.1
413
Tumor
-0.1
344
Normal
-0.1
468
Normal
-0.1
867
Tumor
-0.1
272
Normal
-0.1
465
Tumor
-0.1
952
Normal
-0.1
384
Normal
-0.1
356
Normal
-0.1
148
Normal
-0.1
572
Normal
-0.1
218
Normal
-0.1
482
Normal
-0.1
636
Normal
-0.1
618
Normal
-0.1
818
Normal
-0.1
195
Tumor
-0.1
258
Normal
-0.1
815
Tumor
-0.1
714
Normal
-0.1
981
Tumor
-0.1
944
Normal
-0.1
686
Normal
-0.1
536
Normal
-0.1
728
Normal
-0.1
968
Normal
-0.1
354
Normal
-0.1
696
Normal
-0.1
514
Normal
-0.1
873
Tumor
-0.1
192
Normal
-0.1
744
Normal
-0.1
1046
Normal
-0.1
926
Normal
-0.1
958
Normal
-0.1
568
Normal
-0.1
883
Tumor
-0.2
464
Normal
-0.2
478
Normal
-0.2
937
Tumor
-0.2
615
Tumor
-0.2
424
Normal
-0.2
964
Normal
-0.2
435
Tumor
-0.2
778
Normal
-0.2
526
Normal
-0.2
456
Normal
-0.2
363
Tumor
-0.2
298
Normal
-0.2
518
Normal
-0.2
452
Normal
-0.2
574
Normal
-0.2
756
Normal
-0.2
746
Normal
-0.2
824
Normal
-0.2
462
Normal
-0.2
912
Normal
-0.2
858
Normal
-0.2
466
Normal
-0.2
727
Tumor
-0.2
884
Normal
-0.2
524
Normal
-0.2
161
Tumor
-0.2
816
Normal
-0.2
882
Normal
-0.2
698
Normal
-0.3
448
Normal
-0.3
814
Normal
-0.3
1045
Tumor
-0.3
516
Normal
-0.3
786
Normal
-0.4
755
Tumor
-0.4
341
Tumor
-0.4
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LIVER CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
