HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Medium
RNA expressioni
Consensus:4.0 nTPM
HPA Brain:43.3 nTPM
GTEx:4.0 nTPM
FANTOM5:10.0 Scaled Tags Per Million
Pig:3.9 nTPM
Mouse:2.4 nTPM
Allen mouse:1.8 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA036414Antibody HPA036415
Glial cells Not detectedLow
Neuronal cells Not detectedMedium





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 43.3
Sample id Sample description nTPM
Hippocampus
nTPM: 34.0
2148 Female, age 91, left hemisphere 52.3
1911 Female, age 85, right hemisphere 36.5
2529 Female, age 94, left hemisphere 35.2
1898 Male, age 80, left hemisphere 28.8
2621 Female, age 67, right hemisphere 27.4
1855 Male, age 76, left hemisphere 23.6
Dentate gyrus
nTPM: 39.9
2531 Female, age 67, both hemispheres 57.0
2528 Male, age 74, both hemispheres 46.6
2246 Female, age 85, both hemispheres 36.2
2010 Male, age 76, both hemispheres 34.8
1927 Female, age 91, both hemispheres 32.5
2530 Female, age 94, left hemisphere 32.3
Entorhinal gyrus
nTPM: 27.7
2764 Male, age 80, right hemisphere 39.3
2117 Female, age 91, right hemisphere 39.0
2686 Male, age 75, right hemisphere 28.6
1787 Male, age 76, left hemisphere 23.8
1938 Female, age 85, left hemisphere 20.5
2613 Female, age 94, left hemisphere 15.2
Hippocampus, CA1
nTPM: 37.1
2082 Female, age 91, right hemisphere 55.2
1873 Female, age 85, both hemispheres 39.9
2045 Male, age 76, both hemispheres 34.3
2527 Male, age 74, both hemispheres 30.0
2749 Male, age 80, left hemisphere 26.3
Hippocampus, CA2
nTPM: 33.1
2113 Female, age 91, right hemisphere 51.3
2249 Male, age 74, both hemispheres 39.2
1940 Female, age 85, left hemisphere 36.7
2437 Female, age 94, left hemisphere 31.6
1963 Male, age 80, left hemisphere 25.2
1892 Male, age 76, both hemispheres 14.4
Hippocampus, CA3
nTPM: 43.3
2620 Female, age 94, left hemisphere 64.2
2436 Male, age 74, both hemispheres 56.3
2861 Female, age 67, both hemispheres 49.5
2137 Male, age 80, left hemisphere 36.4
1891 Female, age 85, both hemispheres 31.1
1867 Male, age 76, both hemispheres 22.6
Parahippocampal cortex
nTPM: 33.5
2693 Female, age 94, both hemispheres 39.6
2245 Female, age 91, both hemispheres 39.4
2532 Female, age 72, left hemisphere 38.6
2622 Female, age 67, right hemisphere 38.3
2250 Female, age 67, right hemisphere 34.4
2018 Male, age 76, both hemispheres 33.8
1990 Female, age 91, right hemisphere 30.4
1933 Female, age 85, both hemispheres 29.0
2692 Male, age 74, both hemispheres 27.1
1850 Male, age 80, both hemispheres 24.2
Perirhinal gyrus
nTPM: 30.9
2521 Female, age 94, right hemisphere 45.0
1794 Male, age 80, right hemisphere 31.6
1847 Female, age 91, left hemisphere 30.4
1841 Female, age 85, right hemisphere 25.8
2848 Male, age 76, right hemisphere 21.4
Subiculum
nTPM: 34.7
2729 Female, age 91, right hemisphere 62.4
1901 Male, age 80, both hemispheres 34.2
2619 Male, age 74, both hemispheres 33.1
2042 Male, age 76, both hemispheres 29.8
1977 Female, age 85, both hemispheres 27.1
2438 Female, age 94, left hemisphere 21.7

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 4.0
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 4.0
Samples: 197

Max nTPM: 12.2
Min nTPM: 1.0
Std nTPM: 1.9
Median nTPM: 3.6
GTEX-1GZHY-0011-R1a-SM-CE6RR 50-59 years, female 12.2
GTEX-Y8DK-0011-R1A-SM-4RGLO 60-69 years, male 10.5
GTEX-11GSP-0011-R1a-SM-9QEJ3 60-69 years, female 10.5
GTEX-14BIM-0011-R1a-SM-69LQI 60-69 years, female 9.3
GTEX-QVUS-0011-R1A-SM-3GAD2 60-69 years, female 8.7
GTEX-11ONC-0011-R1a-SM-57WD4 60-69 years, male 8.5
GTEX-13G51-0011-R1a-SM-5LZYR 60-69 years, male 8.4
GTEX-17F97-0011-R1b-SM-7IGM9 50-59 years, male 8.4
GTEX-NPJ7-0011-R1a-SM-3GACT 60-69 years, female 8.4
GTEX-1B996-0011-R1b-SM-7P8PO 60-69 years, male 8.3
GTEX-S7SE-0011-R1A-SM-2XCDE 50-59 years, male 8.2
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 10.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 10.0
FF:10153-102I9 76 years, female 14.9
FF:10169-103B7 60 years, female 5.1

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 3.9
Pig sample Sample description nTPM
Subiculum
nTPM: 3.5
Samples: 4

Max nTPM: 4.4
Min nTPM: 2.5
Sample A Female 3.4
Sample B Female 2.5
Sample C Male 3.8
Sample D Male 4.4
Dorsal hippocampus
nTPM: 3.0
Samples: 4

Max nTPM: 3.1
Min nTPM: 2.9
Sample A Female 2.9
Sample B Female 3.1
Sample C Male 3.0
Sample D Male 2.9
Entorhinal cortex
nTPM: 3.9
Samples: 4

Max nTPM: 4.6
Min nTPM: 3.4
Sample A Female 4.6
Sample B Female 3.6
Sample C Male 3.9
Sample D Male 3.4
Ventral hippocampus
nTPM: 3.5
Samples: 4

Max nTPM: 4.5
Min nTPM: 3.1
Sample A Female 3.1
Sample B Female 3.1
Sample C Male 4.5
Sample D Male 3.2

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 2.4
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 2.4
Samples: 4

Max nTPM: 2.9
Min nTPM: 1.8
Sample A Male 2.5
Sample B Male 2.4
Sample C Female 2.9
Sample D Female 1.8
Hippocampal formation
nTPM: 1.8
Samples: 4

Max nTPM: 2.1
Min nTPM: 1.4
Sample A Male 1.6
Sample B Male 2.1
Sample C Female 1.4
Sample D Female 2.1

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 1.8
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 1.8
74958587 Antisense, RP_060315_05_B07, Mouse strain C57BL/6J (56 days, male) 2.7
70227938 Antisense, RP_050524_02_B09, Mouse strain C57BL/6J (56 days, male) 0.9

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