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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
83.9
nTPM
HPA Brain:
151.1
nTPM
GTEx:
83.9
nTPM
FANTOM5:
62.8
Scaled Tags Per Million
Pig:
41.0
nTPM
Mouse:
127.5
nTPM
Allen mouse:
15.8
Expression energy
AMYGDALA - HPA Brain RNA-seq
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
151.1
Sample id
Sample description
nTPM
Amygdala nTPM: 121.8
2814
Male, age 76, right hemisphere
153.0
2517
Female, age 94, left hemisphere
121.7
2695
Female, age 67, right hemisphere
113.9
1987
Female, age 91, left hemisphere
113.3
2514
Male, age 75, right hemisphere
107.2
Basal amygdala nTPM: 136.8
2827
Female, age 67, right hemisphere
176.2
2685
Female, age 94, left hemisphere
163.2
1955
Male, age 76, both hemispheres
130.3
2110
Male, age 80, left hemisphere
129.4
2243
Female, age 91, right hemisphere
113.6
2609
Male, age 75, right hemisphere
108.3
Central amygdala nTPM: 135.7
2826
Female, age 94, left hemisphere
181.7
1905
Male, age 76, both hemispheres
138.8
2239
Male, age 80, left hemisphere
130.7
2701
Female, age 91, right hemisphere
123.0
2515
Male, age 75, right hemisphere
104.4
Corticomedial amygdala nTPM: 116.3
2535
Female, age 67, right hemisphere
151.6
2829
Male, age 80, left hemisphere
128.3
2429
Female, age 94, left hemisphere
123.0
2240
Male, age 76, both hemispheres
106.1
2242
Female, age 91, right hemisphere
95.1
2428
Male, age 75, right hemisphere
94.0
Lateral amygdala nTPM: 151.1
2830
Female, age 67, right hemisphere
199.4
2534
Female, age 94, left hemisphere
178.3
2256
Male, age 80, left hemisphere
139.2
1883
Male, age 76, both hemispheres
134.0
2255
Female, age 91, right hemisphere
132.9
2516
Male, age 75, right hemisphere
122.7
AMYGDALA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
83.9
GTEx sample id
Sample description
nTPM
Brain - Amygdala Average nTPM: 83.9
Samples: 152
Max nTPM: 172.3
Min nTPM: 22.9
Std nTPM: 25.9
Median nTPM: 81.9
GTEX-1HCU6-0011-R4b-SM-ARU74
60-69 years, female
172.3
GTEX-131XH-0011-R4b-SM-5DUWB
50-59 years, male
151.0
GTEX-1B8L1-0011-R4a-SM-7EWFJ
60-69 years, male
145.6
GTEX-1HBPH-0011-R4a-SM-A96RX
40-49 years, female
145.2
GTEX-XLM4-0011-R4B-SM-4AT5C
60-69 years, male
140.6
GTEX-ZAB4-0011-R4a-SM-4SOKB
40-49 years, male
140.0
GTEX-1HFI6-0011-R4b-SM-A96RT
40-49 years, male
137.2
GTEX-14E7W-0011-R4b-SM-62LEA
70-79 years, male
136.8
GTEX-14PJM-0011-R4a-SM-5YYAS
50-59 years, female
136.6
GTEX-1AX9I-0011-R4b-SM-7EPIB
60-69 years, male
135.8
GTEX-WZTO-0011-R4A-SM-3NMC7
40-49 years, male
133.9
GTEX-N7MS-0011-R4a-SM-2HMKW
60-69 years, male
131.7
GTEX-18464-0011-R4a-SM-7LG6T
50-59 years, male
129.8
GTEX-13N1W-0011-R4a-SM-5MR52
70-79 years, male
125.1
GTEX-1N2DW-0011-R4b-SM-EZ6MD
50-59 years, male
124.3
GTEX-12WSF-0011-R4b-SM-5HL88
70-79 years, male
123.8
GTEX-1F48J-0011-R4b-SM-9OSVX
50-59 years, female
120.6
GTEX-13O3O-0011-R4b-SM-5KM3F
60-69 years, female
119.2
GTEX-1E1VI-0011-R4b-SM-9QEHV
50-59 years, male
114.3
GTEX-X585-0011-R4B-SM-46MVH
50-59 years, male
113.4
GTEX-Q2AG-0011-R4A-SM-2HMKA
40-49 years, female
109.5
GTEX-X4XX-0011-R4B-SM-46MWL
60-69 years, male
108.8
GTEX-17EVP-0011-R4a-SM-79OML
40-49 years, male
108.6
GTEX-14ASI-0011-R4a-SM-69LQ4
60-69 years, male
107.8
GTEX-15SHU-0011-R4b-SM-7IGLC
40-49 years, female
105.4
GTEX-1B996-0011-R4b-SM-9OSVO
60-69 years, male
103.7
GTEX-12WSD-0011-R4b-SM-5LZUA
60-69 years, female
103.3
GTEX-WHSE-0011-R4A-SM-3P5ZN
20-29 years, male
101.9
GTEX-13X6I-0011-R4b-SM-5PNU9
60-69 years, male
100.3
GTEX-1CB4G-0011-R4b-SM-CJI28
60-69 years, male
99.0
GTEX-1F7RK-0011-R4b-SM-9QEI7
20-29 years, female
98.7
GTEX-1ICLZ-0011-R4a-SM-CMKHL
60-69 years, male
98.6
GTEX-11ONC-0011-R4b-SM-DO93H
60-69 years, male
98.2
GTEX-1GN73-0011-R4b-SM-9QEIK
60-69 years, male
98.2
GTEX-1H3NZ-0011-R4a-SM-CL54T
60-69 years, male
97.9
GTEX-15CHQ-0011-R4a-SM-686ZX
60-69 years, male
96.6
GTEX-1A3MX-0011-R4b-SM-7EWFK
60-69 years, male
96.5
GTEX-13O3Q-0011-R4a-SM-5P9H2
50-59 years, male
96.1
GTEX-145MI-0011-R4b-SM-5PNZH
60-69 years, female
95.2
GTEX-1H23P-0011-R4b-SM-CL54R
60-69 years, male
95.2
GTEX-13X6K-0011-R4b-SM-5P9HO
60-69 years, female
94.2
GTEX-1IY9M-0011-R4a-SM-C1YQ2
60-69 years, male
94.1
GTEX-1313W-0011-R4b-SM-5KLZV
50-59 years, female
93.6
GTEX-13OW8-0011-R4a-SM-9WG6V
60-69 years, male
93.5
GTEX-13112-0011-R4b-SM-5DUXL
50-59 years, male
92.6
GTEX-13OVH-0011-R4a-SM-5KM3W
70-79 years, male
92.2
GTEX-13VXU-0011-R4b-SM-5O9CI
50-59 years, male
92.1
GTEX-T5JC-0011-R4A-SM-32PLT
20-29 years, male
91.9
GTEX-1C6WA-0011-R4a-SM-9QEH2
60-69 years, male
91.9
GTEX-13JVG-0011-R4a-SM-5MR4C
60-69 years, male
91.2
GTEX-1LSVX-0011-R4b-SM-EXURP
60-69 years, male
90.7
GTEX-P44G-0011-R4A-SM-2I3FB
30-39 years, male
90.6
GTEX-1GF9W-0011-R4a-SM-CE6RH
60-69 years, male
90.5
GTEX-1EX96-0011-R4a-SM-ARU82
50-59 years, male
90.0
GTEX-1HBPI-0011-R4a-SM-CJI3K
50-59 years, male
89.4
GTEX-144GL-0011-R4a-SM-5PNUI
50-59 years, male
88.9
GTEX-YFC4-0011-R4a-SM-4RGLQ
40-49 years, female
88.7
GTEX-1I1GR-0011-R4a-SM-CMKHC
60-69 years, male
88.4
GTEX-13X6J-0011-R4b-SM-5P9K4
50-59 years, male
87.7
GTEX-145LS-0011-R4b-SM-5S2UT
60-69 years, female
87.3
GTEX-ZAK1-0011-R4a-SM-6AJBK
50-59 years, female
87.3
GTEX-1JMQJ-0011-R4b-SM-EXUT8
50-59 years, male
87.0
GTEX-1JJEA-0011-R4a-SM-EXUTC
60-69 years, male
86.8
GTEX-11PRG-0011-R4a-SM-DNZZR
50-59 years, male
85.4
GTEX-14ABY-0011-R4b-SM-5S2VN
50-59 years, male
85.1
GTEX-1LVAO-0011-R4a-SM-EXURO
60-69 years, male
84.7
GTEX-1F6IF-0011-R4b-SM-CKZNJ
60-69 years, male
84.1
GTEX-S7SE-0011-R4A-SM-2XCDB
50-59 years, male
83.8
GTEX-1H1DG-0011-R4a-SM-CE6RQ
70-79 years, male
83.7
GTEX-1GTWX-0011-R4a-SM-C1YQI
60-69 years, male
82.9
GTEX-1N2EE-0011-R4a-SM-EXOII
60-69 years, male
82.8
GTEX-14DAQ-0011-R4a-SM-5YYAI
60-69 years, female
82.5
GTEX-14JIY-0011-R4b-SM-5ZZV7
60-69 years, male
82.3
GTEX-UTHO-0011-R4A-SM-3GIJP
60-69 years, male
82.1
GTEX-17HG3-0011-R4a-SM-7IGLL
30-39 years, female
82.0
GTEX-1C6VR-0011-R4b-SM-9QEGZ
60-69 years, male
81.9
GTEX-1EMGI-0011-R4b-SM-CJI2D
60-69 years, male
81.9
GTEX-NPJ7-0011-R4a-SM-2I3GJ
60-69 years, female
81.7
GTEX-R55E-0011-R4A-SM-2TC5H
20-29 years, male
80.5
GTEX-15DYW-0011-R4a-SM-6M46V
60-69 years, female
80.4
GTEX-1J1OQ-0011-R4a-SM-D4P2A
40-49 years, female
78.6
GTEX-13OW6-0011-R4a-SM-5O9DX
50-59 years, male
78.5
GTEX-13RTJ-0011-R4b-SM-5PNX1
60-69 years, male
77.9
GTEX-TSE9-0011-R4A-SM-3DB7H
60-69 years, female
77.9
GTEX-N7MT-0011-R4a-SM-2I3G9
60-69 years, female
77.6
GTEX-1GZ4I-0011-R4a-SM-9QEI9
50-59 years, male
77.3
GTEX-14PQA-0011-R4b-SM-6AJBU
50-59 years, female
77.2
GTEX-RNOR-0011-R4A-SM-3GAD3
50-59 years, female
76.1
GTEX-ZE9C-0011-R4a-SM-4WKH6
60-69 years, male
75.8
GTEX-Y8DK-0011-R4A-SM-EXUR1
60-69 years, male
75.7
GTEX-13FLV-0011-R4a-SM-5LZYU
50-59 years, male
75.5
GTEX-1JN6P-0011-R4a-SM-EZ6MS
60-69 years, male
75.5
GTEX-1J8Q2-0011-R4a-SM-ADEHA
60-69 years, male
75.2
GTEX-WVLH-0011-R4A-SM-3MJFS
50-59 years, male
74.9
GTEX-11TTK-0011-R4a-SM-DNZZU
60-69 years, female
74.4
GTEX-11NUK-0011-R4a-SM-DO12B
50-59 years, male
74.2
GTEX-1H1CY-0011-R4b-SM-CJI3G
60-69 years, female
74.1
GTEX-17F97-0011-R4b-SM-7KFS2
50-59 years, male
73.5
GTEX-13CZV-0011-R4b-SM-5J2NY
60-69 years, male
73.4
GTEX-QVJO-0011-R4A-SM-2S1QL
60-69 years, female
73.4
GTEX-131YS-0011-R4a-SM-5DUVL
60-69 years, female
72.1
GTEX-13PVQ-0011-R4a-SM-5O9CT
50-59 years, male
71.9
GTEX-14BIM-0011-R4b-SM-5S2RK
60-69 years, female
71.8
GTEX-1445S-0011-R4a-SM-5PNWN
60-69 years, male
71.7
GTEX-1H3O1-0011-R4b-SM-A9SKE
60-69 years, male
71.1
GTEX-ZVZQ-0011-R4b-SM-57WCZ
60-69 years, female
70.2
GTEX-1HB9E-0011-R4b-SM-ARZLS
50-59 years, male
70.1
GTEX-15DCD-0011-R4a-SM-69LPB
70-79 years, female
69.9
GTEX-13SLX-0011-R4a-SM-5O9BJ
50-59 years, female
69.4
GTEX-13NYB-0011-R4b-SM-9QEGJ
40-49 years, male
68.2
GTEX-1GMR8-0011-R4a-SM-9OSX1
50-59 years, female
67.3
GTEX-1F75A-0011-R4a-SM-ARL8J
50-59 years, male
67.2
GTEX-QMR6-0011-R4A-SM-32PKU
50-59 years, male
67.1
GTEX-12WSA-0011-R4a-SM-57WB7
60-69 years, male
66.6
GTEX-1399T-0011-R4b-SM-5DUVX
60-69 years, male
66.5
GTEX-13OVL-0011-R4b-SM-5L3HV
50-59 years, male
65.8
GTEX-183WM-0011-R4a-SM-7LG6S
70-79 years, female
65.0
GTEX-NL3H-0011-R4a-SM-2I3GK
60-69 years, male
65.0
GTEX-13OW7-0011-R4b-SM-5O9CX
50-59 years, male
64.9
GTEX-1H1ZS-0011-R4b-SM-CKZO7
70-79 years, male
64.6
GTEX-QVUS-0011-R4A-SM-3GAE7
60-69 years, female
64.1
GTEX-P44H-0011-R4A-SM-2XCEW
40-49 years, male
63.0
GTEX-12WSH-0011-R4a-SM-5GU6K
50-59 years, male
62.9
GTEX-15EO6-0011-R4a-SM-7KUKZ
50-59 years, male
62.9
GTEX-1H2FU-0011-R4a-SM-CL551
60-69 years, female
62.7
GTEX-14PN4-0011-R4a-SM-686ZT
50-59 years, male
61.3
GTEX-12ZZZ-0011-R4b-SM-5DUV7
60-69 years, male
60.0
GTEX-QDT8-0011-R4A-SM-32PKM
30-39 years, female
59.6
GTEX-1J8EW-0011-R4b-SM-ARU89
60-69 years, female
59.5
GTEX-13N2G-0011-R4b-SM-5MR54
60-69 years, male
59.4
GTEX-17EVQ-0011-R4b-SM-7LT94
70-79 years, male
59.4
GTEX-11ZVC-0011-R4a-SM-5BC6Z
50-59 years, female
59.0
GTEX-15ER7-0011-R4a-SM-6M46S
20-29 years, female
58.9
GTEX-13NYS-0011-R4b-SM-5MR3O
60-69 years, male
58.4
GTEX-13QIC-0011-R4a-SM-5PNX8
60-69 years, female
58.1
GTEX-16YQH-0011-R4a-SM-7EPGI
30-39 years, male
56.8
GTEX-13OW5-0011-R4b-SM-5L3HS
60-69 years, male
56.4
GTEX-147GR-0011-R4a-SM-5S2V2
60-69 years, male
55.4
GTEX-NPJ8-0011-R4a-SM-2HML3
40-49 years, male
55.2
GTEX-14JG1-0011-R4b-SM-62LEB
40-49 years, male
54.3
GTEX-13SLW-0011-R4b-SM-5S2W2
70-79 years, male
51.9
GTEX-12ZZW-0011-R4a-SM-5DUX9
50-59 years, male
50.6
GTEX-139T8-0011-R4a-SM-5HL54
60-69 years, male
49.8
GTEX-NL4W-0011-R4a-SM-2I5GZ
50-59 years, male
47.2
GTEX-T6MN-0011-R4A-SM-32QPG
50-59 years, male
47.2
GTEX-13OVJ-0011-R4b-SM-5P9H5
50-59 years, female
43.3
GTEX-1CB4J-0011-R4b-SM-9WG5P
60-69 years, male
41.4
GTEX-14JFF-0011-R4a-SM-5ZZV5
60-69 years, male
39.9
GTEX-OHPN-0011-R4A-SM-2I5FD
60-69 years, female
36.1
GTEX-15DDE-0011-R4b-SM-7KULI
50-59 years, female
35.7
GTEX-11ZU8-0011-R4a-SM-5BC6Y
60-69 years, male
26.8
GTEX-X4EP-0011-R4B-SM-3P627
60-69 years, female
22.9
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AMYGDALA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
127.5
Mouse sample
Sample description
nTPM
Amygdala nTPM: 127.5
Samples: 4
Max nTPM: 137.5
Min nTPM: 118.8
Sample A
Male
134.3
Sample B
Male
119.4
Sample C
Female
137.5
Sample D
Female
118.8
AMYGDALA - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
Max subtype Expression energyi
Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.