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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
LAPTM5 is not prognostic in Liver Hepatocellular Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
41.6
Number of samples
362
Samples
Sample
Description
TPM
TCGA-CC-A3M9-01A
0 years, male, asian, stage:Stage IIIA, dead, 300 days
503.8
TCGA-ED-A5KG-01A
0 years, female, asian, stage:Stage II, alive, 854 days
363.2
TCGA-GJ-A3OU-01A
0 years, male, white, stage:Stage I, alive, 879 days
346.3
TCGA-CC-A1HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 101 days
315.7
TCGA-CC-A7IJ-01A
0 years, male, asian, stage:Stage II, alive, 382 days
293.4
TCGA-YA-A8S7-01A
0 years, male, white, stage:Stage IIIA, dead, 412 days
270.2
TCGA-DD-A4NR-01A
0 years, female, white, stage:Stage I, dead, 9 days
179.7
TCGA-DD-A114-01A
0 years, male, black or african american, stage:Stage II, dead, 1149 days
174.2
TCGA-DD-A1EC-01A
0 years, female, white, stage:Stage I, alive, 602 days
152.3
TCGA-CC-5260-01A
0 years, female, asian, stage:Stage IIIC, dead, 87 days
148.2
TCGA-DD-AACZ-01A
0 years, female, asian, stage:Stage I, dead, 171 days
138.8
TCGA-XR-A8TD-01A
0 years, female, white, stage:Stage IIIB, alive, 1030 days
138.2
TCGA-ED-A66X-01A
0 years, male, asian, stage:Stage IIIA, alive, 406 days
136.5
TCGA-G3-AAV7-01A
0 years, male, asian, stage:Stage II, alive, 361 days
135.7
TCGA-DD-AACC-01A
0 years, male, asian, stage:Stage I, dead, 1685 days
128.0
TCGA-DD-AACL-01A
0 years, female, asian, stage:Stage I, dead, 107 days
124.5
TCGA-PD-A5DF-01A
0 years, female, white, stage:Stage IIIB, dead, 639 days
118.9
TCGA-ED-A627-01A
0 years, male, white, stage:Stage I, alive, 423 days
118.8
TCGA-K7-A5RG-01A
0 years, male, black or african american, stage:Stage I, alive, 519 days
115.9
TCGA-BC-A8YO-01A
0 years, female, white, stage:Stage IIIC, alive, 562 days
111.9
TCGA-G3-A25X-01A
0 years, male, asian, stage:Stage II, alive, 1779 days
110.1
TCGA-5C-AAPD-01A
0 years, male, asian, stage:Stage II, alive, 20 days
105.1
TCGA-2Y-A9GX-01A
0 years, male, white, stage:Stage I, alive, 2442 days
105.0
TCGA-DD-AAVQ-01A
0 years, male, asian, stage:Stage I, alive, 2728 days
104.6
TCGA-CC-5263-01A
0 years, male, asian, stage:Stage IIIA, dead, 129 days
103.3
TCGA-2Y-A9GY-01A
0 years, female, white, stage:Stage II, dead, 757 days
98.8
TCGA-CC-5261-01A
0 years, male, asian, stage:Stage II, dead, 97 days
97.8
TCGA-DD-AACI-01A
0 years, male, asian, stage:Stage II, alive, 1618 days
92.8
TCGA-DD-A4NA-01A
0 years, female, white, stage:Stage IIIC, alive, 1008 days
89.3
TCGA-DD-AAD5-01A
0 years, male, asian, stage:Stage I, alive, 1345 days
87.1
TCGA-DD-AAD1-01A
0 years, female, asian, stage:Stage I, alive, 564 days
85.6
TCGA-DD-AAW0-01A
0 years, male, asian, stage:Stage I, alive, 2015 days
83.6
TCGA-DD-A4NS-01A
0 years, female, white, stage:Stage I, dead, 2456 days
81.3
TCGA-UB-A7MF-01A
0 years, male, white, stage:Stage IIIA, dead, 214 days
80.2
TCGA-ED-A97K-01A
0 years, male, asian, stage:Stage IIIA, alive, 6 days
79.1
TCGA-FV-A4ZQ-01A
0 years, male, white, stage:Stage I, alive, 12 days
78.1
TCGA-EP-A3RK-01A
0 years, male, white, stage:Stage IIIA, alive, 363 days
77.0
TCGA-FV-A4ZP-01A
0 years, male, white, stage:Stage IIIA, dead, 2486 days
76.8
TCGA-KR-A7K8-01A
0 years, male, stage:Stage I, alive, 906 days
75.9
TCGA-2Y-A9GW-01A
0 years, male, white, stage:Stage I, dead, 1271 days
75.4
TCGA-DD-A3A6-01A
0 years, female, white, stage:Stage II, dead, 3258 days
74.5
TCGA-DD-AAVV-01A
0 years, male, asian, stage:Stage II, alive, 2455 days
73.7
TCGA-DD-AAEK-01A
0 years, male, asian, stage:Stage II, alive, 1067 days
72.5
TCGA-DD-A4NJ-01A
0 years, female, white, stage:Stage II, alive, 928 days
72.4
TCGA-BC-A110-01A
0 years, female, black or african american, stage:'--, dead, 2116 days
72.3
TCGA-ED-A7PX-01A
0 years, female, asian, stage:Stage II, alive, 6 days
72.0
TCGA-DD-A4NH-01A
0 years, female, white, stage:Stage IIIB, alive, 917 days
71.8
TCGA-DD-AADN-01A
0 years, male, asian, stage:Stage I, alive, 898 days
70.9
TCGA-DD-A4ND-01A
0 years, female, white, stage:Stage I, alive, 2746 days
69.7
TCGA-DD-A1EG-01A
0 years, male, white, stage:Stage I, dead, 1372 days
69.4
TCGA-BD-A3EP-01A
0 years, female, black or african american, stage:Stage I, alive, 409 days
68.9
TCGA-2Y-A9GS-01A
0 years, male, white, stage:'--, dead, 724 days
68.6
TCGA-GJ-A6C0-01A
0 years, female, white, stage:Stage II, dead, 31 days
68.4
TCGA-BC-A10W-01A
0 years, male, asian, stage:'--, dead, 91 days
66.8
TCGA-ZP-A9D2-01A
0 years, male, white, stage:'--, dead, 765 days
66.5
TCGA-G3-A25Y-01A
0 years, female, asian, stage:Stage I, dead, 452 days
66.4
TCGA-DD-AAVR-01A
0 years, male, asian, stage:Stage I, alive, 2513 days
66.1
TCGA-DD-A73F-01A
0 years, female, white, stage:Stage I, alive, 1085 days
65.9
TCGA-CC-A8HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 140 days
65.5
TCGA-FV-A3I1-01A
0 years, female, white, stage:Stage II, dead, 247 days
64.7
TCGA-HP-A5MZ-01A
0 years, male, stage:Stage I, dead, 91 days
63.7
TCGA-CC-5262-01A
0 years, male, asian, stage:Stage IIIC, dead, 103 days
63.3
TCGA-BC-A112-01A
0 years, male, white, stage:'--, dead, 153 days
63.1
TCGA-BC-A10Q-01A
0 years, female, white, stage:'--, dead, 1135 days
61.8
TCGA-UB-A7MD-01A
0 years, male, black or african american, stage:Stage I, dead, 52 days
61.0
TCGA-2Y-A9H2-01A
0 years, female, white, stage:Stage I, alive, 1731 days
59.1
TCGA-2Y-A9H3-01A
0 years, male, white, stage:Stage II, alive, 1516 days
58.8
TCGA-K7-AAU7-01A
0 years, male, white, stage:Stage II, alive, 359 days
58.3
TCGA-5R-AAAM-01A
0 years, female, white, stage:Stage II, dead, 46 days
57.1
TCGA-DD-AACH-01A
0 years, male, asian, stage:Stage II, dead, 195 days
56.9
TCGA-DD-AADB-01A
0 years, male, asian, stage:Stage I, alive, 1242 days
55.9
TCGA-FV-A3R3-01A
0 years, female, white, stage:Stage I, dead, 366 days
55.9
TCGA-G3-A5SJ-01A
0 years, male, white, stage:Stage I, alive, 698 days
55.8
TCGA-DD-AADI-01A
0 years, female, asian, stage:Stage I, alive, 1085 days
55.7
TCGA-DD-AACB-01A
0 years, female, asian, stage:Stage I, alive, 2324 days
55.5
TCGA-DD-A1EJ-01A
0 years, female, white, stage:Stage IIIC, dead, 1005 days
54.2
TCGA-FV-A3I0-01A
0 years, female, white, stage:Stage II, alive, 848 days
54.2
TCGA-DD-AAVW-01A
0 years, male, asian, stage:Stage I, alive, 2317 days
53.7
TCGA-DD-AAD2-01A
0 years, male, asian, stage:Stage I, alive, 658 days
53.3
TCGA-WX-AA44-01A
0 years, female, white, stage:Stage I, alive, 615 days
53.2
TCGA-ZP-A9CZ-01A
0 years, male, asian, stage:'--, alive, 706 days
53.1
TCGA-BC-A10S-01A
0 years, male, white, stage:'--, dead, 1423 days
53.1
TCGA-ED-A459-01A
0 years, male, asian, stage:Stage II, alive, 910 days
52.1
TCGA-RG-A7D4-01A
0 years, male, black or african american, stage:Stage II, alive, 1098 days
51.7
TCGA-DD-A4NB-01A
0 years, male, white, stage:Stage I, alive, 989 days
51.3
TCGA-GJ-A9DB-01A
0 years, male, white, stage:Stage I, dead, 67 days
51.2
TCGA-O8-A75V-01A
0 years, male, stage:Stage I, alive, 538 days
49.8
TCGA-DD-A4NQ-01A
0 years, male, white, stage:Stage II, dead, 373 days
49.2
TCGA-BC-A69H-01A
0 years, male, white, stage:Stage II, alive, 444 days
49.2
TCGA-MR-A8JO-01A
0 years, male, white, stage:Stage I, alive, 330 days
49.0
TCGA-UB-A7ME-01A
0 years, male, asian, stage:Stage I, alive, 486 days
49.0
TCGA-FV-A495-01A
0 years, female, white, stage:Stage II, alive, 1 days
47.3
TCGA-CC-A3MA-01A
0 years, male, asian, stage:Stage IIIA, dead, 303 days
47.3
TCGA-G3-A5SM-01A
0 years, male, white, stage:Stage II, alive, 520 days
47.1
TCGA-G3-A25T-01A
0 years, female, white, stage:Stage IIIA, alive, 1553 days
47.0
TCGA-UB-AA0U-01A
0 years, male, white, stage:Stage II, alive, 327 days
46.9
TCGA-DD-A1EK-01A
0 years, female, white, stage:Stage IVB, dead, 558 days
46.8
TCGA-5R-AA1D-01A
0 years, female, white, stage:Stage IIIA, alive, 449 days
46.5
TCGA-ED-A4XI-01A
0 years, male, asian, stage:Stage II, alive, 819 days
46.1
TCGA-G3-AAV3-01A
0 years, female, white, stage:Stage II, alive, 412 days
45.7
TCGA-2Y-A9H0-01A
0 years, male, white, stage:Stage IIIA, alive, 3675 days
45.7
TCGA-DD-A1EF-01A
0 years, female, white, stage:Stage I, dead, 394 days
45.4
TCGA-DD-AAEH-01A
0 years, male, asian, stage:Stage I, alive, 784 days
44.0
TCGA-K7-A5RF-01A
0 years, male, white, stage:Stage I, alive, 631 days
43.7
TCGA-ED-A82E-01A
0 years, female, asian, stage:Stage IIIA, alive, 408 days
43.2
TCGA-FV-A2QR-01A
0 years, male, white, stage:Stage I, dead, 581 days
43.1
TCGA-CC-A7IG-01A
0 years, male, asian, stage:Stage II, dead, 299 days
42.4
TCGA-DD-AAE4-01A
0 years, female, asian, stage:Stage I, alive, 608 days
42.4
TCGA-2Y-A9GT-01A
0 years, male, white, stage:Stage I, dead, 1624 days
42.3
TCGA-DD-A1EI-01A
0 years, male, asian, stage:Stage I, alive, 183 days
41.9
TCGA-G3-A25V-01A
0 years, male, white, stage:Stage I, alive, 860 days
41.2
TCGA-DD-AAEI-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
41.1
TCGA-CC-5264-01A
0 years, male, asian, stage:Stage IIIA, dead, 102 days
41.1
TCGA-2Y-A9H6-01A
0 years, female, white, stage:Stage I, alive, 357 days
41.0
TCGA-EP-A2KA-01A
0 years, female, white, stage:Stage IIIA, dead, 627 days
40.9
TCGA-2Y-A9GV-01A
0 years, female, white, stage:Stage I, dead, 2532 days
40.8
TCGA-DD-A39V-01A
0 years, male, white, stage:Stage II, dead, 643 days
40.5
TCGA-DD-AAD3-01A
0 years, male, asian, stage:Stage I, alive, 1295 days
40.5
TCGA-DD-A113-01A
0 years, female, white, stage:Stage II, alive, 2425 days
40.3
TCGA-DD-A3A1-01A
0 years, male, stage:Stage IIIA, dead, 233 days
40.2
TCGA-EP-A3JL-01A
0 years, male, white, stage:Stage I, alive, 303 days
40.0
TCGA-G3-A7M6-01A
0 years, female, white, stage:Stage I, alive, 632 days
39.7
TCGA-DD-A1EA-01A
0 years, male, asian, stage:Stage II, alive, 2415 days
39.6
TCGA-ZP-A9CV-01A
0 years, male, white, stage:'--, dead, 1088 days
39.4
TCGA-CC-5258-01A
0 years, male, asian, stage:Stage II, dead, 129 days
39.0
TCGA-DD-AAE2-01A
0 years, male, asian, stage:Stage I, alive, 638 days
38.3
TCGA-DD-AACD-01A
0 years, male, asian, stage:Stage I, dead, 381 days
38.3
TCGA-DD-AAVS-01A
0 years, male, asian, stage:Stage I, alive, 1823 days
37.8
TCGA-DD-AADC-01A
0 years, male, asian, stage:Stage I, dead, 425 days
37.5
TCGA-CC-A5UC-01A
0 years, male, asian, stage:Stage IIIA, dead, 347 days
37.1
TCGA-KR-A7K7-01A
0 years, female, white, stage:Stage II, alive, 951 days
37.0
TCGA-2Y-A9HB-01A
0 years, male, stage:Stage I, alive, 260 days
36.8
TCGA-G3-A3CH-01A
0 years, male, asian, stage:Stage IIIA, alive, 780 days
36.7
TCGA-MI-A75E-01A
0 years, male, white, stage:Stage IIIC, alive, 507 days
36.3
TCGA-DD-AACU-01A
0 years, male, asian, stage:Stage I, alive, 1567 days
36.1
TCGA-BD-A3ER-01A
0 years, male, white, stage:Stage II, alive, 1115 days
35.8
TCGA-DD-A73G-01A
0 years, female, white, stage:Stage I, alive, 3478 days
35.7
TCGA-CC-A3MC-01A
0 years, male, asian, stage:Stage IIIA, alive, 363 days
35.4
TCGA-2Y-A9H8-01A
0 years, female, white, stage:'--, dead, 633 days
34.9
TCGA-DD-A1ED-01A
0 years, male, white, stage:Stage I, alive, 2301 days
34.6
TCGA-RC-A6M6-01A
0 years, male, white, stage:Stage II, alive, 9 days
33.9
TCGA-CC-A7II-01A
0 years, male, asian, stage:Stage IIIA, alive, 399 days
33.7
TCGA-CC-A7IE-01A
0 years, male, asian, stage:Stage IIIA, dead, 217 days
33.6
TCGA-FV-A2QQ-01A
0 years, male, white, stage:Stage I, alive, 729 days
33.5
TCGA-2Y-A9H4-01A
0 years, male, black or african american, stage:Stage I, alive, 1452 days
33.3
TCGA-ED-A7XO-01A
0 years, male, asian, stage:Stage IIIA, alive, 427 days
33.3
TCGA-DD-AACF-01A
0 years, male, asian, stage:Stage I, dead, 365 days
33.2
TCGA-G3-A7M9-01A
0 years, male, white, stage:Stage IIIB, dead, 56 days
33.1
TCGA-DD-AADV-01A
0 years, male, asian, stage:Stage I, alive, 574 days
33.0
TCGA-DD-AADO-01A
0 years, male, asian, stage:Stage I, alive, 453 days
32.8
TCGA-DD-AADW-01A
0 years, male, asian, stage:Stage I, alive, 587 days
32.7
TCGA-BC-A10X-01A
0 years, female, white, stage:Stage IIIA, dead, 770 days
32.7
TCGA-DD-AACN-01A
0 years, male, asian, stage:Stage I, alive, 1302 days
32.5
TCGA-DD-AAEA-01A
0 years, male, asian, stage:Stage I, alive, 575 days
32.2
TCGA-DD-AAC9-01A
0 years, male, asian, stage:Stage I, alive, 347 days
31.9
TCGA-ZS-A9CD-01A
0 years, male, white, stage:Stage II, dead, 1386 days
31.7
TCGA-DD-AADS-01A
0 years, male, asian, stage:Stage I, alive, 474 days
31.7
TCGA-ZP-A9CY-01A
0 years, female, white, stage:'--, alive, 782 days
31.7
TCGA-DD-A3A9-01A
0 years, female, white, stage:Stage IVB, dead, 931 days
31.6
TCGA-ED-A7XP-01A
0 years, female, asian, stage:Stage II, alive, 400 days
31.3
TCGA-DD-A11C-01A
0 years, male, white, stage:Stage I, alive, 662 days
31.2
TCGA-UB-AA0V-01A
0 years, female, white, stage:Stage I, alive, 314 days
31.1
TCGA-DD-A73A-01A
0 years, male, white, stage:Stage I, alive, 728 days
30.8
TCGA-DD-A4NI-01A
0 years, male, white, stage:Stage II, alive, 816 days
30.7
TCGA-2Y-A9H5-01A
0 years, female, white, stage:Stage I, dead, 555 days
30.7
TCGA-XR-A8TG-01A
0 years, male, white, stage:Stage I, alive, 898 days
30.7
TCGA-DD-A1EH-01A
0 years, male, white, stage:Stage III, alive, 1495 days
30.3
TCGA-4R-AA8I-01A
0 years, male, white, stage:Stage II, dead, 262 days
30.2
TCGA-DD-A116-01A
0 years, male, asian, stage:Stage IIIA, dead, 1622 days
29.9
TCGA-DD-AADP-01A
0 years, male, asian, stage:Stage I, alive, 458 days
29.8
TCGA-DD-AACO-01A
0 years, male, asian, stage:Stage I, alive, 1876 days
29.7
TCGA-K7-A6G5-01A
0 years, male, white, stage:Stage I, alive, 512 days
29.6
TCGA-G3-A3CK-01A
0 years, male, asian, stage:Stage I, alive, 585 days
29.5
TCGA-ZP-A9D1-01A
0 years, female, white, stage:'--, alive, 21 days
29.0
TCGA-HP-A5N0-01A
0 years, female, stage:'--, dead, 752 days
28.9
TCGA-DD-A118-01A
0 years, female, white, stage:Stage II, alive, 3437 days
28.7
TCGA-DD-A1EL-01A
0 years, male, black or african american, stage:Stage II, dead, 415 days
28.7
TCGA-BW-A5NO-01A
0 years, male, black or african american, stage:Stage IIIA, alive, 20 days
28.7
TCGA-DD-AAC8-01A
0 years, male, asian, stage:Stage I, dead, 16 days
28.6
TCGA-G3-AAUZ-01A
0 years, male, stage:Stage I, alive, 480 days
28.6
TCGA-DD-AACG-01A
0 years, male, asian, stage:Stage II, dead, 469 days
28.5
TCGA-KR-A7K0-01A
0 years, male, white, stage:Stage I, dead, 65 days
28.5
TCGA-MI-A75I-01A
0 years, male, black or african american, stage:'--, alive, 630 days
28.3
TCGA-ZS-A9CF-01A
0 years, male, white, stage:Stage II, alive, 2412 days
27.8
TCGA-BC-A216-01A
0 years, female, white, stage:Stage IIIA, alive, 1351 days
27.8
TCGA-FV-A23B-01A
0 years, female, white, stage:Stage II, dead, 1852 days
27.7
TCGA-DD-A115-01A
0 years, male, white, stage:Stage IIIA, dead, 2542 days
27.7
TCGA-DD-A4NV-01A
0 years, male, white, stage:Stage IIIA, alive, 2398 days
27.3
TCGA-MI-A75H-01A
0 years, male, white, stage:'--, alive, 747 days
27.2
TCGA-5C-A9VG-01A
0 years, male, white, stage:Stage II, alive, 328 days
26.6
TCGA-DD-AAE0-01A
0 years, female, asian, stage:Stage IIIA, alive, 555 days
26.3
TCGA-BC-A10T-01A
0 years, male, white, stage:'--, dead, 837 days
26.2
TCGA-DD-A39Y-01A
0 years, male, asian, stage:Stage I, dead, 171 days
25.9
TCGA-DD-AA3A-01A
0 years, female, white, stage:Stage I, dead, 410 days
25.9
TCGA-DD-A73C-01A
0 years, female, white, stage:Stage IIIA, alive, 701 days
25.8
TCGA-DD-AADK-01A
0 years, female, asian, stage:Stage II, alive, 1049 days
25.7
TCGA-DD-AADR-01A
0 years, male, asian, stage:Stage I, alive, 2028 days
25.7
TCGA-CC-A3MB-01A
0 years, male, asian, stage:Stage IIIA, dead, 315 days
25.6
TCGA-DD-AADA-01A
0 years, female, asian, stage:Stage I, alive, 1233 days
25.6
TCGA-5R-AA1C-01A
0 years, male, white, stage:Stage II, alive, 520 days
25.5
TCGA-G3-A25Z-01A
0 years, male, asian, stage:Stage I, alive, 655 days
25.2
TCGA-WQ-AB4B-01A
0 years, male, white, stage:Stage II, alive, 395 days
25.1
TCGA-G3-A25S-01A
0 years, male, white, stage:Stage I, dead, 416 days
25.0
TCGA-ED-A8O6-01A
0 years, female, asian, stage:Stage IIIA, dead, 56 days
25.0
TCGA-DD-AADD-01A
0 years, male, asian, stage:Stage I, alive, 1231 days
24.9
TCGA-DD-AAE7-01A
0 years, male, asian, stage:Stage I, alive, 644 days
24.6
TCGA-FV-A3R2-01A
0 years, male, white, stage:Stage I, dead, 194 days
24.6
TCGA-CC-A5UD-01A
0 years, male, asian, stage:Stage IIIA, dead, 304 days
24.3
TCGA-CC-A5UE-01A
0 years, male, asian, stage:Stage IIIB, dead, 272 days
24.1
TCGA-DD-AACK-01A
0 years, male, asian, stage:Stage I, alive, 9 days
23.3
TCGA-5C-A9VH-01A
0 years, male, white, stage:Stage I, alive, 322 days
23.3
TCGA-DD-A39X-01A
0 years, female, white, stage:Stage I, dead, 1694 days
23.2
TCGA-DD-AACT-01A
0 years, female, asian, stage:Stage I, alive, 1562 days
23.2
TCGA-G3-A3CI-01A
0 years, male, white, stage:Stage I, alive, 180 days
22.8
TCGA-XR-A8TE-01A
0 years, male, white, stage:Stage IIIA, alive, 925 days
22.8
TCGA-DD-AAE3-01A
0 years, male, asian, stage:Stage I, alive, 566 days
22.6
TCGA-2Y-A9H9-01A
0 years, male, white, stage:Stage I, alive, 697 days
22.5
TCGA-BC-A217-01A
0 years, female, white, stage:Stage II, dead, 1397 days
22.4
TCGA-BC-A10U-01A
0 years, male, white, stage:'--, dead, 837 days
22.3
TCGA-BC-A69I-01A
0 years, male, white, stage:Stage I, alive, 387 days
22.3
TCGA-DD-AAED-01A
0 years, male, asian, stage:Stage I, alive, 763 days
22.3
TCGA-BC-A10R-01A
0 years, female, white, stage:'--, dead, 308 days
22.2
TCGA-G3-A5SK-01A
0 years, male, white, stage:Stage I, alive, 744 days
22.1
TCGA-G3-A7M8-01A
0 years, male, asian, stage:Stage I, alive, 430 days
22.0
TCGA-DD-A1EE-01A
0 years, male, white, stage:Stage IIIA, dead, 349 days
22.0
TCGA-DD-AAVZ-01A
0 years, male, asian, stage:Stage I, alive, 1900 days
21.1
TCGA-KR-A7K2-01A
0 years, male, white, stage:Stage I, alive, 829 days
20.9
TCGA-WQ-A9G7-01A
0 years, female, white, stage:'--, alive, 30 days
20.9
TCGA-BC-A10Y-01A
0 years, male, white, stage:'--, dead, 711 days
20.8
TCGA-UB-A7MA-01A
0 years, female, white, stage:Stage II, alive, 848 days
20.2
TCGA-RC-A7S9-01A
0 years, female, asian, stage:Stage I, alive, 640 days
19.9
TCGA-WX-AA46-01A
0 years, male, white, stage:Stage II, alive, 756 days
19.8
TCGA-RC-A6M5-01A
0 years, female, white, stage:Stage IVA, alive, 15 days
19.8
TCGA-CC-A9FW-01A
0 years, male, asian, stage:Stage IIIA, alive, 248 days
19.7
TCGA-EP-A2KC-01A
0 years, male, black or african american, stage:Stage I, dead, 19 days
19.7
TCGA-DD-AACX-01A
0 years, male, asian, stage:Stage II, alive, 170 days
19.4
TCGA-CC-A123-01A
0 years, female, asian, stage:Stage IIIA, alive, 219 days
19.4
TCGA-G3-AAV1-01A
0 years, male, asian, stage:Stage IIIC, dead, 359 days
19.3
TCGA-DD-AAVX-01A
0 years, male, asian, stage:Stage II, alive, 1718 days
19.3
TCGA-DD-AADM-01A
0 years, male, asian, stage:Stage II, dead, 12 days
19.3
TCGA-DD-A4NN-01A
0 years, female, white, stage:Stage I, dead, 899 days
18.6
TCGA-G3-A3CG-01A
0 years, male, white, stage:Stage I, alive, 673 days
18.6
TCGA-DD-A4NL-01A
0 years, male, white, stage:Stage I, alive, 1711 days
18.6
TCGA-RC-A7SB-01A
0 years, male, asian, stage:Stage II, alive, 588 days
18.4
TCGA-DD-AAVP-01A
0 years, male, asian, stage:Stage I, alive, 2752 days
18.4
TCGA-2Y-A9H1-01A
0 years, male, white, stage:Stage I, dead, 1229 days
18.3
TCGA-DD-A4NG-01A
0 years, male, white, stage:Stage IIIA, dead, 802 days
18.1
TCGA-2Y-A9HA-01A
0 years, male, white, stage:Stage II, dead, 36 days
18.0
TCGA-DD-A3A5-01A
0 years, female, white, stage:Stage III, dead, 3125 days
17.4
TCGA-BD-A2L6-01A
0 years, male, white, stage:'--, alive, 1363 days
17.2
TCGA-CC-A9FS-01A
0 years, male, asian, stage:Stage II, alive, 211 days
17.2
TCGA-DD-A119-01A
0 years, male, asian, stage:Stage IV, dead, 223 days
17.1
TCGA-ZP-A9D4-01A
0 years, female, white, stage:'--, alive, 395 days
16.8
TCGA-DD-A4NE-01A
0 years, female, white, stage:Stage IIIA, dead, 660 days
16.4
TCGA-DD-A3A7-01A
0 years, male, stage:Stage IIIB, dead, 419 days
16.3
TCGA-QA-A7B7-01A
0 years, male, black or african american, stage:Stage II, alive, 94 days
16.2
TCGA-DD-A4NK-01A
0 years, female, white, stage:Stage IIIA, dead, 1210 days
16.2
TCGA-T1-A6J8-01A
0 years, male, white, stage:'--, alive, 23 days
16.0
TCGA-DD-AADL-01A
0 years, male, asian, stage:Stage I, alive, 636 days
16.0
TCGA-G3-AAV4-01A
0 years, female, white, stage:Stage I, dead, 27 days
16.0
TCGA-DD-AACY-01A
0 years, male, asian, stage:Stage I, alive, 1450 days
15.9
TCGA-DD-AAD6-01A
0 years, male, asian, stage:Stage IIIA, alive, 672 days
15.8
TCGA-2Y-A9H7-01A
0 years, female, white, stage:Stage I, alive, 1168 days
15.8
TCGA-CC-A8HU-01A
0 years, female, asian, stage:Stage IIIA, dead, 344 days
15.7
TCGA-DD-AAD8-01A
0 years, female, asian, stage:Stage I, alive, 1219 days
15.5
TCGA-DD-AACA-01A
0 years, male, asian, stage:Stage I, alive, 2301 days
15.4
TCGA-UB-A7MB-01A
0 years, male, white, stage:Stage II, alive, 601 days
15.4
TCGA-MI-A75C-01A
0 years, male, white, stage:Stage I, alive, 291 days
15.2
TCGA-LG-A6GG-01A
0 years, female, white, stage:Stage II, alive, 387 days
15.2
TCGA-G3-AAV5-01A
0 years, male, white, stage:Stage II, alive, 354 days
15.1
TCGA-MR-A520-01A
0 years, male, white, stage:Stage I, alive, 229 days
14.9
TCGA-DD-AACW-01A
0 years, male, asian, stage:Stage I, alive, 1424 days
14.9
TCGA-ES-A2HT-01A
0 years, male, black or african american, stage:Stage I, dead, 438 days
14.7
TCGA-G3-AAV2-01A
0 years, male, white, stage:Stage I, alive, 372 days
14.7
TCGA-DD-A4NO-01A
0 years, male, white, stage:Stage I, alive, 2245 days
14.6
TCGA-3K-AAZ8-01A
0 years, male, black or african american, stage:Stage IIIB, alive, 396 days
14.6
TCGA-ZS-A9CG-01A
0 years, male, white, stage:Stage II, alive, 341 days
14.6
TCGA-XR-A8TC-01A
0 years, female, white, stage:Stage I, alive, 1339 days
14.5
TCGA-DD-AADU-01A
0 years, male, asian, stage:Stage II, alive, 554 days
14.4
TCGA-BC-A3KF-01A
0 years, female, white, stage:Stage I, alive, 8 days
14.3
TCGA-CC-A7IF-01A
0 years, male, asian, stage:Stage IIIA, dead, 649 days
14.3
TCGA-EP-A26S-01A
0 years, male, white, stage:Stage I, alive, 608 days
14.3
TCGA-BC-A3KG-01A
0 years, female, white, stage:Stage II, alive, 680 days
14.3
TCGA-CC-A8HS-01A
0 years, male, asian, stage:Stage IIIC, dead, 300 days
14.2
TCGA-DD-AAD0-01A
0 years, female, asian, stage:Stage I, alive, 137 days
14.0
TCGA-DD-AAE1-01A
0 years, male, asian, stage:Stage I, alive, 552 days
13.9
TCGA-DD-AADY-01A
0 years, female, asian, stage:Stage I, alive, 555 days
13.9
TCGA-G3-AAV6-01A
0 years, female, white, stage:Stage IIIA, dead, 65 days
13.8
TCGA-DD-A39W-01A
0 years, female, white, stage:Stage III, dead, 827 days
13.7
TCGA-DD-AACP-01A
0 years, male, asian, stage:Stage I, alive, 415 days
13.7
TCGA-ES-A2HS-01A
0 years, male, white, stage:Stage I, dead, 688 days
13.4
TCGA-CC-5259-01A
0 years, female, asian, stage:Stage IIIC, alive, 250 days
13.0
TCGA-XR-A8TF-01A
0 years, male, white, stage:Stage I, dead, 693 days
12.9
TCGA-DD-A11D-01A
0 years, female, white, stage:Stage I, dead, 1560 days
12.8
TCGA-EP-A12J-01A
0 years, male, black or african american, stage:Stage I, alive, 570 days
12.8
TCGA-DD-AADF-01A
0 years, female, asian, stage:Stage I, dead, 115 days
12.8
TCGA-ED-A7PZ-01A
0 years, male, asian, stage:Stage II, alive, 6 days
12.8
TCGA-DD-AADJ-01A
0 years, female, asian, stage:Stage I, alive, 1066 days
12.7
TCGA-ED-A8O5-01A
0 years, female, asian, stage:Stage IIIA, alive, 406 days
12.6
TCGA-NI-A4U2-01A
0 years, male, white, stage:Stage IIIA, dead, 1791 days
12.6
TCGA-DD-AAEE-01A
0 years, male, asian, stage:Stage I, alive, 810 days
12.5
TCGA-DD-AAEG-01A
0 years, female, asian, stage:Stage I, alive, 719 days
12.4
TCGA-EP-A2KB-01A
0 years, female, white, stage:Stage I, dead, 596 days
12.3
TCGA-UB-A7MC-01A
0 years, male, white, stage:Stage IIIA, alive, 500 days
12.2
TCGA-RC-A7SF-01A
0 years, male, asian, stage:Stage I, alive, 579 days
12.2
TCGA-NI-A8LF-01A
0 years, male, white, stage:Stage I, alive, 799 days
12.1
TCGA-ZP-A9D0-01A
0 years, female, black or african american, stage:'--, alive, 1091 days
12.0
TCGA-2Y-A9GU-01A
0 years, female, white, stage:Stage I, alive, 1939 days
11.8
TCGA-DD-AAE9-01A
0 years, male, asian, stage:Stage I, alive, 722 days
11.5
TCGA-G3-A7M7-01A
0 years, male, white, stage:Stage I, alive, 361 days
11.5
TCGA-G3-A5SL-01A
0 years, male, white, stage:Stage II, alive, 621 days
11.5
TCGA-WJ-A86L-01A
0 years, female, white, stage:Stage I, alive, 345 days
11.4
TCGA-DD-A3A3-01A
0 years, male, asian, stage:Stage I, dead, 535 days
11.4
TCGA-DD-AAVU-01A
0 years, male, asian, stage:Stage II, alive, 2202 days
11.4
TCGA-DD-AACS-01A
0 years, male, asian, stage:Stage I, alive, 1804 days
11.3
TCGA-2Y-A9GZ-01A
0 years, female, white, stage:Stage II, dead, 848 days
11.2
TCGA-DD-AACJ-01A
0 years, male, asian, stage:Stage II, alive, 2102 days
11.2
TCGA-G3-A7M5-01A
0 years, male, asian, stage:Stage I, alive, 447 days
11.0
TCGA-DD-A3A8-01A
0 years, male, white, stage:Stage II, dead, 11 days
10.9
TCGA-G3-AAV0-01A
0 years, male, asian, stage:Stage I, alive, 476 days
10.9
TCGA-DD-A11B-01A
0 years, male, white, stage:Stage I, dead, 14 days
10.9
TCGA-ED-A7PY-01A
0 years, female, asian, stage:Stage II, alive, 390 days
10.8
TCGA-DD-A1EB-01A
0 years, female, stage:Stage I, alive, 2017 days
10.8
TCGA-LG-A9QD-01A
0 years, male, white, stage:Stage IIIA, alive, 366 days
10.6
TCGA-DD-A4NP-01A
0 years, male, white, stage:Stage I, alive, 3308 days
10.5
TCGA-G3-A5SI-01A
0 years, male, asian, stage:Stage II, dead, 768 days
10.4
TCGA-DD-AAEB-01A
0 years, male, asian, stage:Stage I, alive, 478 days
10.4
TCGA-DD-A4NF-01A
0 years, male, white, stage:Stage I, alive, 942 days
10.4
TCGA-G3-A6UC-01A
0 years, male, white, stage:Stage IIIB, alive, 671 days
10.1
TCGA-DD-AADQ-01A
0 years, male, asian, stage:Stage II, alive, 436 days
10.1
TCGA-LG-A9QC-01A
0 years, male, white, stage:Stage I, alive, 425 days
10.1
TCGA-DD-AAW2-01A
0 years, male, asian, stage:Stage I, alive, 1855 days
10.1
TCGA-RC-A7SH-01A
0 years, male, asian, stage:Stage II, alive, 468 days
10.0
TCGA-DD-A73B-01A
0 years, female, white, stage:Stage I, dead, 283 days
9.9
TCGA-DD-AAW3-01A
0 years, male, asian, stage:Stage I, alive, 1633 days
9.8
TCGA-CC-A7IK-01A
0 years, male, asian, stage:Stage IIIA, dead, 262 days
9.8
TCGA-DD-A3A2-01A
0 years, female, white, stage:Stage I, dead, 2131 days
9.8
TCGA-CC-A7IH-01A
0 years, male, asian, stage:Stage IIIA, alive, 365 days
9.7
TCGA-G3-A25U-01A
0 years, female, asian, stage:Stage I, alive, 1636 days
9.4
TCGA-RC-A7SK-01A
0 years, male, asian, stage:Stage I, alive, 472 days
9.2
TCGA-MI-A75G-01A
0 years, male, white, stage:Stage II, alive, 698 days
9.1
TCGA-DD-AAW1-01A
0 years, male, asian, stage:Stage IIIA, alive, 1989 days
9.1
TCGA-G3-A3CJ-01A
0 years, male, american indian or alaska native, stage:Stage II, alive, 594 days
9.0
TCGA-DD-AACE-01A
0 years, male, asian, stage:Stage I, alive, 2184 days
8.7
TCGA-ED-A66Y-01A
0 years, female, asian, stage:Stage IIIA, dead, 296 days
8.5
TCGA-DD-AAVY-01A
0 years, male, asian, stage:Stage IIIA, alive, 1970 days
8.4
TCGA-DD-AACQ-01A
0 years, male, asian, stage:Stage II, dead, 432 days
8.4
TCGA-DD-A73E-01A
0 years, male, white, stage:Stage I, alive, 44 days
8.4
TCGA-CC-A8HV-01A
0 years, female, asian, stage:Stage II, dead, 279 days
7.2
TCGA-DD-AADG-01A
0 years, male, asian, stage:Stage IIIA, alive, 1145 days
7.1
TCGA-DD-AACV-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
6.6
TCGA-RC-A6M4-01A
0 years, female, white, stage:Stage IIIA, alive, 22 days
6.5
TCGA-BC-A10Z-01A
0 years, female, white, stage:Stage I, dead, 34 days
6.1
TCGA-CC-A7IL-01A
0 years, male, asian, stage:Stage IIIA, dead, 278 days
6.1
TCGA-DD-A39Z-01A
0 years, female, stage:Stage II, dead, 601 days
5.9
TCGA-BC-A5W4-01A
0 years, male, white, stage:Stage IIIA, dead, 547 days
5.8
TCGA-DD-A73D-01A
0 years, female, white, stage:Stage II, alive, 693 days
4.8
TCGA-FV-A496-01A
0 years, female, white, stage:Stage I, alive, 10 days
4.2
TCGA-DD-A3A4-01A
0 years, male, white, stage:Stage IIIA, dead, 612 days
3.9
TCGA-ZS-A9CE-01A
0 years, female, white, stage:Stage II, alive, 1241 days
3.9
TCGA-DD-AAE6-01A
0 years, female, asian, stage:Stage I, alive, 141 days
3.4
TCGA-WX-AA47-01A
0 years, female, white, stage:Stage IIIA, dead, 556 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
LAPTM5 is not prognostic in Liver Hepatocellular Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
72.6
Number of samples
231
Samples
Sample
Description
TPM
DO23523
0 years, male, NA, stage:3, alive, 1080 days
1123.3
DO23547
0 years, male, NA, stage:1, alive, 1020 days
589.4
DO48747
0 years, male, NA, stage:3, alive, 540 days
561.4
DO50778
0 years, male, NA, stage:4, alive, 630 days
461.1
DO48720
0 years, female, NA, stage:2, alive, 570 days
353.0
DO45277
0 years, male, NA, stage:3, alive, 600 days
337.9
DO45287
0 years, male, NA, stage:1, alive, 390 days
326.8
DO45307
0 years, female, NA, stage:4, dead, 240 days
319.3
DO45139
0 years, male, NA, stage:3, alive, 1320 days
298.0
DO45285
0 years, male, NA, stage:3, alive, 480 days
296.1
DO23535
0 years, male, NA, stage:1, alive, 960 days
295.7
DO50829
0 years, male, NA, stage:3, alive, 570 days
275.5
DO23530
0 years, male, NA, stage:4, dead, 180 days
264.3
DO45275
0 years, male, NA, stage:3, dead, 10 days
220.0
DO45141
0 years, male, NA, stage:2, alive, 1320 days
219.5
DO23519
0 years, male, NA, stage:3, alive, 630 days
218.5
DO45155
0 years, male, NA, stage:2, alive, 2160 days
198.3
DO50819
0 years, female, NA, stage:2, alive, 510 days
192.5
DO48728
0 years, female, NA, stage:2, alive, 150 days
182.4
DO45135
0 years, male, NA, stage:1, alive, 1410 days
177.7
DO23549
0 years, male, NA, stage:3, alive, 990 days
170.7
DO48732
0 years, male, NA, stage:3, alive, 630 days
161.6
DO45145
0 years, male, NA, stage:3, dead, 60 days
144.5
DO48697
0 years, female, NA, stage:2, dead, 810 days
139.1
DO45157
0 years, male, NA, stage:2, alive, 1980 days
134.7
DO45225
0 years, male, NA, stage:1, alive, 1050 days
123.5
DO45303
0 years, female, NA, stage:3, alive, 990 days
122.1
DO50800
0 years, male, NA, stage:2, alive, 510 days
118.7
DO48700
0 years, female, NA, stage:2, alive, 810 days
115.0
DO48730
0 years, female, NA, stage:2, alive, 630 days
114.8
DO45153
0 years, female, NA, stage:2, alive, 1380 days
112.9
DO45231
0 years, male, NA, stage:2, alive, 930 days
112.3
DO23514
0 years, male, NA, stage:2, alive, 1290 days
111.5
DO45273
0 years, male, NA, stage:2, alive, 480 days
111.1
DO50805
0 years, male, NA, stage:2, alive, 690 days
110.7
DO50787
0 years, male, NA, stage:3, alive, 480 days
109.3
DO45115
0 years, male, NA, stage:2, alive, 840 days
106.9
DO45095
0 years, male, NA, stage:2, alive, 1620 days
106.5
DO50803
0 years, female, NA, stage:1, alive, 540 days
105.9
DO45131
0 years, male, NA, stage:4, dead, 360 days
104.2
DO45119
0 years, male, NA, stage:3, dead, 510 days
100.9
DO45177
0 years, female, NA, stage:3, alive, 1260 days
100.1
DO45261
0 years, male, NA, stage:3, alive, 990 days
99.6
DO45297
0 years, female, NA, stage:4, dead, 1260 days
99.3
DO45283
0 years, male, NA, stage:3, alive, 510 days
96.2
DO23543
0 years, male, NA, stage:2, alive, 1020 days
96.0
DO45103
0 years, male, NA, stage:3, alive, 450 days
95.8
DO45159
0 years, male, NA, stage:3, alive, 1470 days
95.5
DO45223
0 years, male, NA, stage:4, alive, 1020 days
94.2
DO50809
0 years, male, NA, stage:3, dead, 720 days
90.8
DO45279
0 years, male, NA, stage:3, alive, 1290 days
90.1
DO45165
0 years, male, NA, stage:2, alive, 690 days
89.5
DO45127
0 years, male, NA, stage:3, dead, 420 days
88.3
DO45263
0 years, male, NA, stage:3, dead, 270 days
87.3
DO45201
0 years, male, NA, stage:1, alive, 900 days
87.1
DO23524
0 years, female, NA, stage:2, alive, 1050 days
82.5
DO45249
0 years, male, NA, stage:1, alive, 630 days
81.9
DO50774
0 years, female, NA, stage:2, alive, 720 days
79.2
DO23546
0 years, male, NA, stage:2, alive, 1050 days
78.8
DO45181
0 years, female, NA, stage:2, alive, 1200 days
78.6
DO48761
0 years, male, NA, stage:2, alive, 870 days
78.6
DO23525
0 years, male, NA, stage:4, alive, 1050 days
78.0
DO48733
0 years, male, NA, stage:2, alive, 600 days
77.7
DO23515
0 years, male, NA, stage:2, alive, 1230 days
77.5
DO50806
0 years, male, NA, stage:4, alive, 540 days
73.2
DO45257
0 years, male, NA, stage:3, alive, 810 days
72.6
DO45235
0 years, female, NA, stage:1, alive, 900 days
71.9
DO45092
0 years, male, NA, stage:4, dead, 1200 days
71.1
DO23542
0 years, male, NA, stage:3, alive, 960 days
70.8
DO45233
0 years, male, NA, stage:3, alive, 900 days
68.7
DO45301
0 years, male, NA, stage:2, dead, 1440 days
66.2
DO23541
0 years, male, NA, stage:2, alive, 930 days
66.2
DO23531
0 years, female, NA, stage:3, alive, 900 days
65.4
DO50850
0 years, male, NA, stage:3, alive, 720 days
65.2
DO48725
0 years, male, NA, stage:1, alive, 780 days
64.9
DO48679
0 years, male, NA, stage:2, alive, 1200 days
64.2
DO48736
0 years, female, NA, stage:1, alive, 600 days
63.2
DO23551
0 years, male, NA, stage:3, dead, 150 days
63.2
DO48743
0 years, female, NA, stage:2, alive, 570 days
61.8
DO45207
0 years, male, NA, stage:1, alive, 1050 days
61.8
DO45299
0 years, female, NA, stage:1, alive, 1440 days
61.7
DO45229
0 years, male, NA, stage:1, alive, 990 days
61.1
DO23527
0 years, male, NA, stage:1, alive, 1050 days
60.9
DO45109
0 years, male, NA, stage:2, alive, 1590 days
59.9
DO45221
0 years, female, NA, stage:4, dead, 390 days
59.5
DO45211
0 years, male, NA, stage:3, alive, 240 days
59.2
DO23550
0 years, male, NA, stage:1, alive, 990 days
59.1
DO45281
0 years, male, NA, stage:4, alive, 750 days
58.8
DO48759
0 years, male, NA, stage:3, alive, 720 days
58.3
DO45161
0 years, male, NA, stage:2, dead, 540 days
57.0
DO45251
0 years, female, NA, stage:2, alive, 900 days
56.8
DO23510
0 years, female, NA, stage:2, alive, 870 days
56.2
DO48693
0 years, male, NA, stage:2, alive, 900 days
54.9
DO48716
0 years, male, NA, stage:2, alive, 720 days
53.4
DO45185
0 years, male, NA, stage:2, alive, 600 days
53.0
DO45265
0 years, male, NA, stage:3, alive, 1020 days
53.0
DO48712
0 years, male, NA, stage:2, alive, 810 days
52.6
DO50799
0 years, female, NA, stage:2, alive, 540 days
50.7
DO45205
0 years, female, NA, stage:2, dead, 90 days
50.4
DO45197
0 years, male, NA, stage:2, alive, 1170 days
49.8
DO45305
0 years, male, NA, stage:4, alive, 300 days
49.1
DO50855
0 years, male, NA, stage:2, alive, 570 days
48.7
DO50818
0 years, male, NA, stage:2, alive, 510 days
47.4
DO50815
0 years, male, NA, stage:3, alive, 150 days
46.2
DO50845
0 years, male, NA, stage:3, alive, 210 days
45.7
DO45203
0 years, female, NA, stage:2, alive, 1170 days
45.7
DO45117
0 years, female, NA, stage:2, dead, 1110 days
45.4
DO45241
0 years, male, NA, stage:1, alive, 1080 days
45.1
DO23508
0 years, female, NA, stage:2, alive, 390 days
45.0
DO50776
0 years, male, NA, stage:1, alive, 690 days
44.8
DO45143
0 years, male, NA, stage:3, alive, 1290 days
44.2
DO227801
0 years, female, NA, stage:1, alive, 660 days
44.2
DO50840
0 years, male, NA, stage:2, alive, 330 days
43.8
DO48737
0 years, male, NA, stage:1, alive, 720 days
42.5
DO45094
0 years, male, NA, stage:3, alive, 1650 days
41.8
DO50791
0 years, female, NA, stage:1, dead, 480 days
41.7
DO45121
0 years, male, NA, stage:3, alive, 1530 days
41.5
DO45093
0 years, male, NA, stage:2, dead, 720 days
40.5
DO48717
0 years, male, NA, stage:4, dead, 180 days
40.5
DO23536
0 years, male, NA, stage:2, alive, 930 days
40.1
DO45255
0 years, male, NA, stage:3, alive, 720 days
39.4
DO50808
0 years, male, NA, stage:2, alive, 570 days
38.9
DO48672
0 years, male, NA, stage:2, alive, 450 days
38.3
DO45243
0 years, female, NA, stage:3, alive, 930 days
38.3
DO23526
0 years, male, NA, stage:3, alive, 1050 days
38.2
DO48701
0 years, male, NA, stage:2, alive, 780 days
37.7
DO45137
0 years, male, NA, stage:1, alive, 1320 days
37.6
DO48704
0 years, female, NA, stage:3, alive, 750 days
37.3
DO45259
0 years, male, NA, stage:3, alive, 330 days
36.2
DO23521
0 years, male, NA, stage:3, alive, 1110 days
35.8
DO50814
0 years, male, NA, stage:3, alive, 420 days
35.6
DO48742
0 years, male, NA, stage:2, alive, 600 days
35.3
DO48760
0 years, female, NA, stage:2, alive, 690 days
35.0
DO23518
0 years, male, NA, stage:2, alive, 1320 days
34.2
DO50822
0 years, male, NA, stage:2, alive, 510 days
34.0
DO50813
0 years, male, NA, stage:2, alive, 420 days
33.4
DO45113
0 years, male, NA, stage:3, alive, 1560 days
33.0
DO45267
0 years, male, NA, stage:3, dead, 570 days
32.1
DO45237
0 years, male, NA, stage:2, alive, 900 days
31.7
DO45199
0 years, female, NA, stage:2, alive, 1350 days
31.7
DO23548
0 years, female, NA, stage:1, alive, 840 days
31.2
DO23537
0 years, male, NA, stage:2, dead, 900 days
31.0
DO45269
0 years, male, NA, stage:3, alive, 750 days
30.0
DO45239
0 years, male, NA, stage:2, alive, 870 days
29.1
DO48715
0 years, female, NA, stage:2, dead, 690 days
28.6
DO45149
0 years, female, NA, stage:2, alive, 1260 days
28.6
DO45217
0 years, female, NA, stage:3, dead, 270 days
28.5
DO48723
0 years, male, NA, stage:1, alive, 600 days
27.9
DO45289
0 years, female, NA, stage:3, alive, 360 days
27.9
DO45253
0 years, male, NA, stage:2, alive, 870 days
27.8
DO50807
0 years, male, NA, stage:1, alive, 540 days
27.7
DO45187
0 years, female, NA, stage:1, alive, 1260 days
27.3
DO45173
0 years, male, NA, stage:3, alive, 1170 days
27.1
DO48741
0 years, male, NA, stage:3, alive, 240 days
26.8
DO45091
0 years, male, NA, stage:2, dead, 1320 days
26.8
DO23540
0 years, male, NA, stage:1, alive, 750 days
26.4
DO45099
0 years, male, NA, stage:3, alive, 1590 days
25.4
DO45213
0 years, male, NA, stage:1, alive, 1200 days
24.4
DO45219
0 years, male, NA, stage:2, alive, 1080 days
23.4
DO23545
0 years, male, NA, stage:2, dead, 570 days
23.0
DO45189
0 years, female, NA, stage:2, alive, 1200 days
22.9
DO45183
0 years, female, NA, stage:2, dead, 570 days
22.9
DO45227
0 years, female, NA, stage:2, alive, 1020 days
22.9
DO23552
0 years, female, NA, stage:1, alive, 810 days
22.6
DO48719
0 years, male, NA, stage:2, alive, 690 days
22.5
DO23532
0 years, female, NA, stage:1, alive, 960 days
21.5
DO45209
0 years, male, NA, stage:4, alive, 1350 days
20.8
DO45171
0 years, male, NA, stage:3, alive, 600 days
20.7
DO45101
0 years, male, NA, stage:2, alive, 1680 days
20.2
DO45193
0 years, female, NA, stage:4, dead, 120 days
20.1
DO50857
0 years, male, NA, stage:2, alive, 210 days
20.0
DO23539
0 years, male, NA, stage:1, alive, 1110 days
19.9
DO45215
0 years, male, NA, stage:2, alive, 1170 days
19.5
DO50802
0 years, male, NA, stage:2, alive, 930 days
19.4
DO23538
0 years, male, NA, stage:2, alive, 450 days
19.2
DO45245
0 years, female, NA, stage:2, dead, 240 days
19.1
DO45247
0 years, female, NA, stage:2, alive, 210 days
19.0
DO45111
0 years, male, NA, stage:2, alive, 1590 days
18.8
DO23511
0 years, female, NA, stage:3, dead, 180 days
18.4
DO50798
0 years, male, NA, stage:3, dead, 30 days
17.9
DO45096
0 years, male, NA, stage:2, dead, 1290 days
17.5
DO23544
0 years, male, NA, stage:2, alive, 960 days
17.1
DO50820
0 years, female, NA, stage:3, alive, 510 days
16.8
DO48695
0 years, male, NA, stage:2, alive, 720 days
16.5
DO45179
0 years, female, NA, stage:2, alive, 600 days
16.4
DO45123
0 years, female, NA, stage:2, dead, 570 days
16.3
DO50825
0 years, male, NA, stage:2, alive, 390 days
16.3
DO50785
0 years, male, NA, stage:4, dead, 90 days
16.1
DO23513
0 years, male, NA, stage:3, alive, 1200 days
16.0
DO227643
0 years, male, NA, stage:2, alive, 1260 days
15.7
DO50783
0 years, male, NA, stage:3, alive, 480 days
15.4
DO50839
0 years, female, NA, stage:3, alive, 330 days
15.2
DO23512
0 years, male, NA, stage:1, alive, 1260 days
15.1
DO50832
0 years, male, NA, stage:3, alive, 90 days
14.8
DO45191
0 years, female, NA, stage:2, alive, 1200 days
14.4
DO45167
0 years, male, NA, stage:2, dead, 1440 days
14.4
DO50789
0 years, female, NA, stage:2, alive, 570 days
14.1
DO45129
0 years, male, NA, stage:3, alive, 1470 days
13.6
DO45195
0 years, male, NA, stage:1, alive, 390 days
13.2
DO23529
0 years, male, NA, stage:4, alive, 930 days
12.2
DO45125
0 years, male, NA, stage:3, alive, 1680 days
11.9
DO45163
0 years, male, NA, stage:2, alive, 960 days
11.8
DO45097
0 years, male, NA, stage:3, alive, 1620 days
11.5
DO45105
0 years, male, NA, stage:1, alive, 1680 days
10.5
DO48674
0 years, male, NA, stage:2, alive, 1260 days
10.5
DO48757
0 years, female, NA, stage:3, alive, 480 days
10.1
DO50804
0 years, male, NA, stage:2, alive, 720 days
10.0
DO48682
0 years, female, NA, stage:3, dead, 120 days
9.9
DO23528
0 years, female, NA, stage:2, alive, 1020 days
9.7
DO48727
0 years, female, NA, stage:2, dead, 390 days
9.2
DO48681
0 years, male, NA, stage:2, alive, 900 days
9.0
DO50816
0 years, male, NA, stage:2, alive, 390 days
9.0
DO50817
0 years, male, NA, stage:2, alive, 390 days
9.0
DO50793
0 years, male, NA, stage:4, alive, 540 days
8.7
DO23509
0 years, male, NA, stage:3, dead, 780 days
8.7
DO45169
0 years, male, NA, stage:3, alive, 1350 days
8.3
DO45133
0 years, male, NA, stage:3, dead, 660 days
8.2
DO23517
0 years, male, NA, stage:2, alive, 1200 days
8.1
DO45107
0 years, female, NA, stage:2, alive, 1710 days
7.9
DO48746
0 years, male, NA, stage:3, alive, 570 days
7.5
DO48677
0 years, male, NA, stage:3, alive, 1140 days
7.1
DO48706
0 years, male, NA, stage:2, alive, 870 days
6.7
DO23534
0 years, male, NA, stage:2, alive, 840 days
5.6
DO45175
0 years, male, NA, stage:2, alive, 1140 days
5.6
DO50859
0 years, male, NA, stage:2, alive, 180 days
5.0
DO23533
0 years, male, NA, stage:2, alive, 900 days
5.0
DO48721
0 years, female, NA, stage:1, alive, 900 days
5.0
DO50811
0 years, male, NA, stage:1, alive, 450 days
4.9
DO23516
0 years, male, NA, stage:3, dead, 20 days
4.4
DO50844
0 years, male, NA, stage:4, alive, 300 days
4.3
DO48751
0 years, male, NA, stage:2, dead, 480 days
2.8
Show allShow less
LIVER HEPATOCELLULAR CARCINOMA - Protein relative expression (CPTAC)
Number of samples
330
Samples
Sample ID
Sample type
nRPX
112
Tumor
2.6
756
Normal
1.9
132
Normal
1.7
786
Normal
1.7
114
Normal
1.6
136
Normal
1.6
124
Normal
1.5
138
Normal
1.5
778
Normal
1.2
126
Normal
1.2
311
Tumor
1.1
743
Tumor
1.0
111
Normal
0.9
113
Tumor
0.9
474
Normal
0.9
146
Normal
0.9
123
Tumor
0.8
661
Tumor
0.8
1031
Tumor
0.7
127
Tumor
0.6
744
Normal
0.6
573
Tumor
0.5
851
Tumor
0.5
141
Tumor
0.5
524
Normal
0.5
125
Tumor
0.5
128
Normal
0.5
145
Tumor
0.5
746
Normal
0.5
817
Tumor
0.5
463
Tumor
0.4
724
Normal
0.4
785
Tumor
0.4
525
Tumor
0.4
472
Normal
0.4
277
Tumor
0.3
571
Tumor
0.3
568
Normal
0.3
462
Normal
0.3
567
Tumor
0.3
332
Normal
0.3
331
Tumor
0.3
1042
Normal
0.2
314
Normal
0.2
1026
Normal
0.2
297
Tumor
0.2
467
Tumor
0.2
137
Tumor
0.2
672
Normal
0.2
517
Tumor
0.2
557
Tumor
0.2
815
Tumor
0.2
526
Normal
0.2
451
Tumor
0.2
312
Normal
0.2
671
Tumor
0.1
823
Tumor
0.1
564
Normal
0.1
1025
Tumor
0.1
572
Normal
0.1
278
Normal
0.1
516
Normal
0.1
514
Normal
0.1
1028
Normal
0.1
558
Normal
0.1
135
Tumor
0.0
728
Normal
0.0
563
Tumor
0.0
666
Normal
0.0
313
Tumor
0.0
662
Normal
0.0
455
Tumor
0.0
142
Normal
0.0
298
Normal
-0.1
518
Normal
-0.1
852
Normal
-0.1
664
Normal
-0.1
574
Normal
-0.1
816
Normal
-0.1
648
Normal
-0.1
665
Tumor
-0.2
814
Normal
-0.2
481
Tumor
-0.2
824
Normal
-0.2
737
Tumor
-0.2
857
Tumor
-0.2
1032
Normal
-0.2
663
Tumor
-0.2
1022
Normal
-0.2
464
Normal
-0.2
741
Tumor
-0.2
1041
Tumor
-0.3
482
Normal
-0.3
452
Normal
-0.3
858
Normal
-0.3
723
Tumor
-0.4
468
Normal
-0.4
515
Tumor
-0.4
466
Normal
-0.4
513
Tumor
-0.5
742
Normal
-0.5
818
Normal
-0.5
727
Tumor
-0.5
738
Normal
-0.5
1021
Tumor
-0.6
456
Normal
-0.6
131
Tumor
-0.7
1045
Tumor
-0.7
162
Normal
-0.7
647
Tumor
-0.7
1046
Normal
-0.7
1044
Normal
-0.8
755
Tumor
-0.8
448
Normal
-0.8
1027
Tumor
-0.8
523
Tumor
-0.8
186
Normal
-0.8
697
Tumor
-0.8
148
Normal
-0.8
473
Tumor
-0.9
465
Tumor
-0.9
698
Normal
-1.1
478
Normal
-1.1
172
Normal
-1.1
1043
Tumor
-1.1
447
Tumor
-1.2
536
Normal
-1.2
813
Tumor
-1.2
535
Tumor
-1.2
461
Tumor
-1.3
477
Tumor
-1.3
188
Normal
-1.8
171
Tumor
-2.1
185
Tumor
-2.3
187
Tumor
-2.4
471
Tumor
-2.5
777
Tumor
-2.5
147
Tumor
-2.6
161
Tumor
-2.7
745
Tumor
-3.3
351
Tumor
N/A
231
Tumor
N/A
352
Normal
N/A
232
Normal
N/A
353
Tumor
N/A
354
Normal
N/A
355
Tumor
N/A
356
Normal
N/A
357
Tumor
N/A
358
Normal
N/A
911
Tumor
N/A
912
Normal
N/A
913
Tumor
N/A
914
Normal
N/A
915
Tumor
N/A
916
Normal
N/A
917
Tumor
N/A
918
Normal
N/A
361
Tumor
N/A
362
Normal
N/A
483
Tumor
N/A
363
Tumor
N/A
484
Normal
N/A
364
Normal
N/A
365
Tumor
N/A
366
Normal
N/A
487
Tumor
N/A
367
Tumor
N/A
488
Normal
N/A
368
Normal
N/A
921
Tumor
N/A
922
Normal
N/A
923
Tumor
N/A
924
Normal
N/A
925
Tumor
N/A
926
Normal
N/A
491
Tumor
N/A
492
Normal
N/A
493
Tumor
N/A
494
Normal
N/A
375
Tumor
N/A
376
Normal
N/A
497
Tumor
N/A
498
Normal
N/A
257
Tumor
N/A
258
Normal
N/A
937
Tumor
N/A
938
Normal
N/A
261
Tumor
N/A
262
Normal
N/A
383
Tumor
N/A
384
Normal
N/A
385
Tumor
N/A
386
Normal
N/A
387
Tumor
N/A
267
Tumor
N/A
388
Normal
N/A
268
Normal
N/A
943
Tumor
N/A
944
Normal
N/A
391
Tumor
N/A
271
Tumor
N/A
392
Normal
N/A
272
Normal
N/A
393
Tumor
N/A
394
Normal
N/A
395
Tumor
N/A
396
Normal
N/A
1016
Normal
N/A
1015
Tumor
N/A
1014
Normal
N/A
951
Tumor
N/A
1013
Tumor
N/A
952
Normal
N/A
953
Tumor
N/A
954
Normal
N/A
713
Tumor
N/A
955
Tumor
N/A
714
Normal
N/A
956
Normal
N/A
715
Tumor
N/A
957
Tumor
N/A
716
Normal
N/A
958
Normal
N/A
283
Tumor
N/A
284
Normal
N/A
285
Tumor
N/A
286
Normal
N/A
721
Tumor
N/A
963
Tumor
N/A
722
Normal
N/A
964
Normal
N/A
965
Tumor
N/A
966
Normal
N/A
967
Tumor
N/A
968
Normal
N/A
975
Tumor
N/A
976
Normal
N/A
977
Tumor
N/A
615
Tumor
N/A
978
Normal
N/A
616
Normal
N/A
617
Tumor
N/A
618
Normal
N/A
981
Tumor
N/A
861
Tumor
N/A
982
Normal
N/A
862
Normal
N/A
983
Tumor
N/A
863
Tumor
N/A
984
Normal
N/A
864
Normal
N/A
865
Tumor
N/A
866
Normal
N/A
867
Tumor
N/A
868
Normal
N/A
627
Tumor
N/A
628
Normal
N/A
191
Tumor
N/A
192
Normal
N/A
195
Tumor
N/A
196
Normal
N/A
873
Tumor
N/A
874
Normal
N/A
635
Tumor
N/A
877
Tumor
N/A
636
Normal
N/A
878
Normal
N/A
881
Tumor
N/A
882
Normal
N/A
641
Tumor
N/A
883
Tumor
N/A
642
Normal
N/A
884
Normal
N/A
527
Tumor
N/A
528
Normal
N/A
411
Tumor
N/A
412
Normal
N/A
533
Tumor
N/A
413
Tumor
N/A
534
Normal
N/A
414
Normal
N/A
415
Tumor
N/A
416
Normal
N/A
537
Tumor
N/A
538
Normal
N/A
421
Tumor
N/A
422
Normal
N/A
423
Tumor
N/A
424
Normal
N/A
545
Tumor
N/A
425
Tumor
N/A
546
Normal
N/A
426
Normal
N/A
427
Tumor
N/A
428
Normal
N/A
431
Tumor
N/A
432
Normal
N/A
553
Tumor
N/A
433
Tumor
N/A
554
Normal
N/A
434
Normal
N/A
435
Tumor
N/A
436
Normal
N/A
443
Tumor
N/A
685
Tumor
N/A
444
Normal
N/A
686
Normal
N/A
445
Tumor
N/A
446
Normal
N/A
327
Tumor
N/A
328
Normal
N/A
211
Tumor
N/A
695
Tumor
N/A
212
Normal
N/A
696
Normal
N/A
213
Tumor
N/A
214
Normal
N/A
217
Tumor
N/A
218
Normal
N/A
341
Tumor
N/A
221
Tumor
N/A
342
Normal
N/A
222
Normal
N/A
343
Tumor
N/A
223
Tumor
N/A
344
Normal
N/A
224
Normal
N/A
227
Tumor
N/A
228
Normal
N/A
Show allShow less
LIVER CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
