HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
RNA expressioni
Consensus:14.0 nTPM
HPA Brain:56.9 nTPM
GTEx:14.0 nTPM
FANTOM5:93.8 Scaled Tags Per Million
Pig:27.2 nTPM
Mouse:11.4 nTPM
Allen mouse:1.5 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA058076
Glial cells Not detected
Neuronal cells Low



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 56.9
Sample id Sample description nTPM
Hippocampus
nTPM: 56.9
2529 Female, age 94, left hemisphere 64.4
1855 Male, age 76, left hemisphere 60.1
1911 Female, age 85, right hemisphere 57.3
2148 Female, age 91, left hemisphere 55.7
2621 Female, age 67, right hemisphere 55.4
1898 Male, age 80, left hemisphere 48.3
Dentate gyrus
nTPM: 52.0
2530 Female, age 94, left hemisphere 60.0
2246 Female, age 85, both hemispheres 53.5
2010 Male, age 76, both hemispheres 52.9
2531 Female, age 67, both hemispheres 52.8
2528 Male, age 74, both hemispheres 51.0
1927 Female, age 91, both hemispheres 41.4
Entorhinal gyrus
nTPM: 51.0
2117 Female, age 91, right hemisphere 61.1
2686 Male, age 75, right hemisphere 52.5
2613 Female, age 94, left hemisphere 51.8
1938 Female, age 85, left hemisphere 50.3
1787 Male, age 76, left hemisphere 48.6
2764 Male, age 80, right hemisphere 41.4
Hippocampus, CA1
nTPM: 48.0
2527 Male, age 74, both hemispheres 54.2
2082 Female, age 91, right hemisphere 52.8
1873 Female, age 85, both hemispheres 48.0
2749 Male, age 80, left hemisphere 44.7
2045 Male, age 76, both hemispheres 40.1
Hippocampus, CA2
nTPM: 49.9
2437 Female, age 94, left hemisphere 54.5
2113 Female, age 91, right hemisphere 53.5
1940 Female, age 85, left hemisphere 51.2
2249 Male, age 74, both hemispheres 49.9
1963 Male, age 80, left hemisphere 47.1
1892 Male, age 76, both hemispheres 43.2
Hippocampus, CA3
nTPM: 54.9
2861 Female, age 67, both hemispheres 75.2
2436 Male, age 74, both hemispheres 64.8
2137 Male, age 80, left hemisphere 49.1
2620 Female, age 94, left hemisphere 48.3
1891 Female, age 85, both hemispheres 46.6
1867 Male, age 76, both hemispheres 45.3
Parahippocampal cortex
nTPM: 47.9
2622 Female, age 67, right hemisphere 57.8
2692 Male, age 74, both hemispheres 56.8
2245 Female, age 91, both hemispheres 51.4
2532 Female, age 72, left hemisphere 51.2
2250 Female, age 67, right hemisphere 46.9
1933 Female, age 85, both hemispheres 46.2
2018 Male, age 76, both hemispheres 44.5
2693 Female, age 94, both hemispheres 43.8
1990 Female, age 91, right hemisphere 43.0
1850 Male, age 80, both hemispheres 37.7
Perirhinal gyrus
nTPM: 42.4
2521 Female, age 94, right hemisphere 47.3
1841 Female, age 85, right hemisphere 43.3
1847 Female, age 91, left hemisphere 41.2
1794 Male, age 80, right hemisphere 41.1
2848 Male, age 76, right hemisphere 38.9
Subiculum
nTPM: 51.4
2042 Male, age 76, both hemispheres 56.5
2729 Female, age 91, right hemisphere 56.2
2619 Male, age 74, both hemispheres 53.2
2438 Female, age 94, left hemisphere 52.7
1977 Female, age 85, both hemispheres 45.1
1901 Male, age 80, both hemispheres 44.6

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 14.0
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 14.0
Samples: 197

Max nTPM: 27.1
Min nTPM: 4.3
Std nTPM: 4.6
Median nTPM: 13.5
GTEX-P44G-0011-R1A-SM-2I3FE 30-39 years, male 27.1
GTEX-13JUV-0011-R1a-SM-5LZY4 40-49 years, female 27.0
GTEX-13OVJ-0011-R1b-SM-5L3I6 50-59 years, female 25.9
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 25.5
GTEX-1GZ2Q-0011-R1a-SM-CJI2Y 40-49 years, male 24.9
GTEX-14PQA-0011-R1b-SM-6EU1G 50-59 years, female 23.5
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 23.4
GTEX-X4XX-0011-R1B-SM-3P622 60-69 years, male 23.4
GTEX-QVUS-0011-R1A-SM-3GAD2 60-69 years, female 23.1
GTEX-WVLH-0011-R1A-SM-4MVOK 50-59 years, male 22.9
GTEX-17JCI-0011-R1b-SM-718A3 60-69 years, female 22.8
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 93.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 93.8
FF:10153-102I9 76 years, female 114.9
FF:10169-103B7 60 years, female 72.7

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 27.2
Pig sample Sample description nTPM
Subiculum
nTPM: 27.2
Samples: 4

Max nTPM: 31.8
Min nTPM: 24.5
Sample A Female 31.8
Sample B Female 26.6
Sample C Male 24.5
Sample D Male 25.9
Dorsal hippocampus
nTPM: 26.3
Samples: 4

Max nTPM: 29.6
Min nTPM: 23.1
Sample A Female 26.5
Sample B Female 29.6
Sample C Male 25.8
Sample D Male 23.1
Entorhinal cortex
nTPM: 26.0
Samples: 4

Max nTPM: 28.2
Min nTPM: 23.9
Sample A Female 28.2
Sample B Female 23.9
Sample C Male 27.2
Sample D Male 24.6
Ventral hippocampus
nTPM: 25.8
Samples: 4

Max nTPM: 31.5
Min nTPM: 19.4
Sample A Female 19.4
Sample B Female 21.7
Sample C Male 30.5
Sample D Male 31.5

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 11.4
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 11.4
Samples: 4

Max nTPM: 13.0
Min nTPM: 10.5
Sample A Male 11.2
Sample B Male 10.8
Sample C Female 10.5
Sample D Female 13.0
Hippocampal formation
nTPM: 9.8
Samples: 4

Max nTPM: 10.5
Min nTPM: 8.5
Sample A Male 8.5
Sample B Male 10.3
Sample C Female 10.0
Sample D Female 10.5

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 1.5
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 1.5
68861766 Antisense, RP_050224_02_H09, Mouse strain C57BL/6J (56 days, male) 1.5

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