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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
ITIH3 is not prognostic in Liver Hepatocellular Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
496.8
Number of samples
362
Samples
Sample
Description
TPM
TCGA-G3-AAV4-01A
0 years, female, white, stage:Stage I, dead, 27 days
2437.7
TCGA-ED-A66Y-01A
0 years, female, asian, stage:Stage IIIA, dead, 296 days
2142.3
TCGA-DD-A73C-01A
0 years, female, white, stage:Stage IIIA, alive, 701 days
2075.0
TCGA-FV-A496-01A
0 years, female, white, stage:Stage I, alive, 10 days
2003.0
TCGA-DD-AADP-01A
0 years, male, asian, stage:Stage I, alive, 458 days
1850.4
TCGA-HP-A5N0-01A
0 years, female, stage:'--, dead, 752 days
1805.5
TCGA-UB-A7ME-01A
0 years, male, asian, stage:Stage I, alive, 486 days
1759.1
TCGA-DD-AAD6-01A
0 years, male, asian, stage:Stage IIIA, alive, 672 days
1621.5
TCGA-DD-A11D-01A
0 years, female, white, stage:Stage I, dead, 1560 days
1567.4
TCGA-LG-A6GG-01A
0 years, female, white, stage:Stage II, alive, 387 days
1556.3
TCGA-DD-A115-01A
0 years, male, white, stage:Stage IIIA, dead, 2542 days
1497.0
TCGA-DD-A3A9-01A
0 years, female, white, stage:Stage IVB, dead, 931 days
1491.5
TCGA-DD-AAE7-01A
0 years, male, asian, stage:Stage I, alive, 644 days
1471.5
TCGA-DD-A11C-01A
0 years, male, white, stage:Stage I, alive, 662 days
1419.6
TCGA-2Y-A9H8-01A
0 years, female, white, stage:'--, dead, 633 days
1419.1
TCGA-DD-AAVY-01A
0 years, male, asian, stage:Stage IIIA, alive, 1970 days
1335.6
TCGA-G3-AAV2-01A
0 years, male, white, stage:Stage I, alive, 372 days
1321.3
TCGA-MI-A75G-01A
0 years, male, white, stage:Stage II, alive, 698 days
1288.8
TCGA-FV-A23B-01A
0 years, female, white, stage:Stage II, dead, 1852 days
1278.1
TCGA-DD-A1EB-01A
0 years, female, stage:Stage I, alive, 2017 days
1275.6
TCGA-BC-A8YO-01A
0 years, female, white, stage:Stage IIIC, alive, 562 days
1231.9
TCGA-DD-A39W-01A
0 years, female, white, stage:Stage III, dead, 827 days
1229.4
TCGA-K7-A6G5-01A
0 years, male, white, stage:Stage I, alive, 512 days
1201.0
TCGA-DD-A4NE-01A
0 years, female, white, stage:Stage IIIA, dead, 660 days
1191.1
TCGA-FV-A3R2-01A
0 years, male, white, stage:Stage I, dead, 194 days
1157.1
TCGA-DD-AAVZ-01A
0 years, male, asian, stage:Stage I, alive, 1900 days
1120.8
TCGA-XR-A8TF-01A
0 years, male, white, stage:Stage I, dead, 693 days
1115.8
TCGA-DD-AADY-01A
0 years, female, asian, stage:Stage I, alive, 555 days
1097.7
TCGA-G3-A3CG-01A
0 years, male, white, stage:Stage I, alive, 673 days
1068.5
TCGA-DD-AAVX-01A
0 years, male, asian, stage:Stage II, alive, 1718 days
1043.4
TCGA-DD-AACU-01A
0 years, male, asian, stage:Stage I, alive, 1567 days
1036.6
TCGA-G3-A25U-01A
0 years, female, asian, stage:Stage I, alive, 1636 days
1034.6
TCGA-G3-A6UC-01A
0 years, male, white, stage:Stage IIIB, alive, 671 days
1027.9
TCGA-BC-A10R-01A
0 years, female, white, stage:'--, dead, 308 days
1018.9
TCGA-DD-AACV-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
1007.5
TCGA-G3-A5SI-01A
0 years, male, asian, stage:Stage II, dead, 768 days
1002.9
TCGA-DD-A1EA-01A
0 years, male, asian, stage:Stage II, alive, 2415 days
999.0
TCGA-ZP-A9CV-01A
0 years, male, white, stage:'--, dead, 1088 days
977.2
TCGA-DD-AACY-01A
0 years, male, asian, stage:Stage I, alive, 1450 days
976.3
TCGA-PD-A5DF-01A
0 years, female, white, stage:Stage IIIB, dead, 639 days
970.1
TCGA-2Y-A9GT-01A
0 years, male, white, stage:Stage I, dead, 1624 days
967.3
TCGA-DD-A1ED-01A
0 years, male, white, stage:Stage I, alive, 2301 days
964.7
TCGA-DD-A3A4-01A
0 years, male, white, stage:Stage IIIA, dead, 612 days
959.4
TCGA-BC-A10U-01A
0 years, male, white, stage:'--, dead, 837 days
937.8
TCGA-4R-AA8I-01A
0 years, male, white, stage:Stage II, dead, 262 days
936.8
TCGA-BC-A5W4-01A
0 years, male, white, stage:Stage IIIA, dead, 547 days
923.3
TCGA-MI-A75E-01A
0 years, male, white, stage:Stage IIIC, alive, 507 days
917.8
TCGA-ZP-A9CY-01A
0 years, female, white, stage:'--, alive, 782 days
912.8
TCGA-DD-AADV-01A
0 years, male, asian, stage:Stage I, alive, 574 days
910.9
TCGA-DD-A3A3-01A
0 years, male, asian, stage:Stage I, dead, 535 days
907.4
TCGA-CC-5264-01A
0 years, male, asian, stage:Stage IIIA, dead, 102 days
884.0
TCGA-2Y-A9H9-01A
0 years, male, white, stage:Stage I, alive, 697 days
882.0
TCGA-3K-AAZ8-01A
0 years, male, black or african american, stage:Stage IIIB, alive, 396 days
872.6
TCGA-DD-AAC9-01A
0 years, male, asian, stage:Stage I, alive, 347 days
870.0
TCGA-DD-AAD2-01A
0 years, male, asian, stage:Stage I, alive, 658 days
868.0
TCGA-BD-A3EP-01A
0 years, female, black or african american, stage:Stage I, alive, 409 days
867.5
TCGA-CC-A7IL-01A
0 years, male, asian, stage:Stage IIIA, dead, 278 days
864.4
TCGA-DD-AAE1-01A
0 years, male, asian, stage:Stage I, alive, 552 days
838.9
TCGA-ES-A2HT-01A
0 years, male, black or african american, stage:Stage I, dead, 438 days
838.7
TCGA-DD-A3A5-01A
0 years, female, white, stage:Stage III, dead, 3125 days
835.1
TCGA-GJ-A6C0-01A
0 years, female, white, stage:Stage II, dead, 31 days
834.1
TCGA-5R-AA1C-01A
0 years, male, white, stage:Stage II, alive, 520 days
833.5
TCGA-2Y-A9HB-01A
0 years, male, stage:Stage I, alive, 260 days
833.5
TCGA-DD-A73B-01A
0 years, female, white, stage:Stage I, dead, 283 days
833.0
TCGA-ZP-A9D0-01A
0 years, female, black or african american, stage:'--, alive, 1091 days
827.2
TCGA-UB-A7MB-01A
0 years, male, white, stage:Stage II, alive, 601 days
806.9
TCGA-DD-AAVV-01A
0 years, male, asian, stage:Stage II, alive, 2455 days
802.7
TCGA-GJ-A9DB-01A
0 years, male, white, stage:Stage I, dead, 67 days
800.1
TCGA-DD-AACW-01A
0 years, male, asian, stage:Stage I, alive, 1424 days
796.6
TCGA-DD-AADJ-01A
0 years, female, asian, stage:Stage I, alive, 1066 days
781.3
TCGA-EP-A26S-01A
0 years, male, white, stage:Stage I, alive, 608 days
774.7
TCGA-2Y-A9H7-01A
0 years, female, white, stage:Stage I, alive, 1168 days
765.3
TCGA-NI-A4U2-01A
0 years, male, white, stage:Stage IIIA, dead, 1791 days
754.1
TCGA-DD-A4NP-01A
0 years, male, white, stage:Stage I, alive, 3308 days
753.3
TCGA-BC-A10T-01A
0 years, male, white, stage:'--, dead, 837 days
749.2
TCGA-CC-A5UE-01A
0 years, male, asian, stage:Stage IIIB, dead, 272 days
746.1
TCGA-XR-A8TE-01A
0 years, male, white, stage:Stage IIIA, alive, 925 days
724.7
TCGA-G3-A5SK-01A
0 years, male, white, stage:Stage I, alive, 744 days
720.8
TCGA-DD-A39Z-01A
0 years, female, stage:Stage II, dead, 601 days
719.8
TCGA-5R-AAAM-01A
0 years, female, white, stage:Stage II, dead, 46 days
712.2
TCGA-DD-AACF-01A
0 years, male, asian, stage:Stage I, dead, 365 days
711.7
TCGA-BC-A217-01A
0 years, female, white, stage:Stage II, dead, 1397 days
708.6
TCGA-BC-A216-01A
0 years, female, white, stage:Stage IIIA, alive, 1351 days
698.9
TCGA-BW-A5NO-01A
0 years, male, black or african american, stage:Stage IIIA, alive, 20 days
685.5
TCGA-DD-AAD0-01A
0 years, female, asian, stage:Stage I, alive, 137 days
685.4
TCGA-DD-AAVQ-01A
0 years, male, asian, stage:Stage I, alive, 2728 days
679.9
TCGA-5C-A9VH-01A
0 years, male, white, stage:Stage I, alive, 322 days
679.6
TCGA-DD-AAEG-01A
0 years, female, asian, stage:Stage I, alive, 719 days
676.9
TCGA-BC-A10X-01A
0 years, female, white, stage:Stage IIIA, dead, 770 days
674.3
TCGA-BC-A10S-01A
0 years, male, white, stage:'--, dead, 1423 days
671.9
TCGA-2Y-A9H5-01A
0 years, female, white, stage:Stage I, dead, 555 days
667.4
TCGA-DD-A11B-01A
0 years, male, white, stage:Stage I, dead, 14 days
663.3
TCGA-ED-A627-01A
0 years, male, white, stage:Stage I, alive, 423 days
662.8
TCGA-DD-A4NV-01A
0 years, male, white, stage:Stage IIIA, alive, 2398 days
657.0
TCGA-ZP-A9D1-01A
0 years, female, white, stage:'--, alive, 21 days
651.7
TCGA-DD-AAD8-01A
0 years, female, asian, stage:Stage I, alive, 1219 days
645.4
TCGA-ED-A7XP-01A
0 years, female, asian, stage:Stage II, alive, 400 days
642.5
TCGA-ED-A4XI-01A
0 years, male, asian, stage:Stage II, alive, 819 days
632.3
TCGA-DD-AACT-01A
0 years, female, asian, stage:Stage I, alive, 1562 days
627.8
TCGA-G3-A3CK-01A
0 years, male, asian, stage:Stage I, alive, 585 days
617.4
TCGA-DD-A4NG-01A
0 years, male, white, stage:Stage IIIA, dead, 802 days
611.5
TCGA-DD-A113-01A
0 years, female, white, stage:Stage II, alive, 2425 days
607.2
TCGA-DD-A3A2-01A
0 years, female, white, stage:Stage I, dead, 2131 days
599.8
TCGA-XR-A8TG-01A
0 years, male, white, stage:Stage I, alive, 898 days
594.9
TCGA-FV-A2QR-01A
0 years, male, white, stage:Stage I, dead, 581 days
590.3
TCGA-DD-AAW0-01A
0 years, male, asian, stage:Stage I, alive, 2015 days
579.1
TCGA-UB-A7MD-01A
0 years, male, black or african american, stage:Stage I, dead, 52 days
572.7
TCGA-EP-A2KC-01A
0 years, male, black or african american, stage:Stage I, dead, 19 days
567.7
TCGA-DD-AAE2-01A
0 years, male, asian, stage:Stage I, alive, 638 days
566.8
TCGA-DD-AADA-01A
0 years, female, asian, stage:Stage I, alive, 1233 days
566.6
TCGA-DD-AAVS-01A
0 years, male, asian, stage:Stage I, alive, 1823 days
566.1
TCGA-ZS-A9CE-01A
0 years, female, white, stage:Stage II, alive, 1241 days
565.8
TCGA-DD-AAW3-01A
0 years, male, asian, stage:Stage I, alive, 1633 days
564.9
TCGA-2Y-A9GZ-01A
0 years, female, white, stage:Stage II, dead, 848 days
562.4
TCGA-BC-A3KG-01A
0 years, female, white, stage:Stage II, alive, 680 days
561.7
TCGA-DD-A3A8-01A
0 years, male, white, stage:Stage II, dead, 11 days
558.8
TCGA-MI-A75I-01A
0 years, male, black or african american, stage:'--, alive, 630 days
557.1
TCGA-K7-A5RG-01A
0 years, male, black or african american, stage:Stage I, alive, 519 days
554.2
TCGA-CC-A7IG-01A
0 years, male, asian, stage:Stage II, dead, 299 days
554.1
TCGA-DD-AAE3-01A
0 years, male, asian, stage:Stage I, alive, 566 days
552.0
TCGA-UB-AA0V-01A
0 years, female, white, stage:Stage I, alive, 314 days
550.5
TCGA-DD-A1EG-01A
0 years, male, white, stage:Stage I, dead, 1372 days
544.1
TCGA-DD-A4NO-01A
0 years, male, white, stage:Stage I, alive, 2245 days
543.3
TCGA-XR-A8TC-01A
0 years, female, white, stage:Stage I, alive, 1339 days
540.3
TCGA-DD-A39V-01A
0 years, male, white, stage:Stage II, dead, 643 days
538.4
TCGA-CC-A7IH-01A
0 years, male, asian, stage:Stage IIIA, alive, 365 days
537.9
TCGA-G3-A5SM-01A
0 years, male, white, stage:Stage II, alive, 520 days
536.6
TCGA-FV-A495-01A
0 years, female, white, stage:Stage II, alive, 1 days
533.9
TCGA-ZS-A9CF-01A
0 years, male, white, stage:Stage II, alive, 2412 days
528.0
TCGA-ED-A459-01A
0 years, male, asian, stage:Stage II, alive, 910 days
527.8
TCGA-ED-A8O5-01A
0 years, female, asian, stage:Stage IIIA, alive, 406 days
527.7
TCGA-G3-A3CH-01A
0 years, male, asian, stage:Stage IIIA, alive, 780 days
522.5
TCGA-DD-A1EJ-01A
0 years, female, white, stage:Stage IIIC, dead, 1005 days
518.5
TCGA-CC-A8HV-01A
0 years, female, asian, stage:Stage II, dead, 279 days
517.0
TCGA-ED-A7XO-01A
0 years, male, asian, stage:Stage IIIA, alive, 427 days
515.8
TCGA-DD-AAEK-01A
0 years, male, asian, stage:Stage II, alive, 1067 days
514.2
TCGA-DD-AACS-01A
0 years, male, asian, stage:Stage I, alive, 1804 days
512.1
TCGA-UB-AA0U-01A
0 years, male, white, stage:Stage II, alive, 327 days
511.4
TCGA-BC-A110-01A
0 years, female, black or african american, stage:'--, dead, 2116 days
510.1
TCGA-RC-A7SB-01A
0 years, male, asian, stage:Stage II, alive, 588 days
509.8
TCGA-DD-AACX-01A
0 years, male, asian, stage:Stage II, alive, 170 days
508.9
TCGA-LG-A9QC-01A
0 years, male, white, stage:Stage I, alive, 425 days
507.1
TCGA-G3-A5SJ-01A
0 years, male, white, stage:Stage I, alive, 698 days
501.8
TCGA-DD-A4ND-01A
0 years, female, white, stage:Stage I, alive, 2746 days
501.6
TCGA-2Y-A9GV-01A
0 years, female, white, stage:Stage I, dead, 2532 days
499.3
TCGA-DD-AAE4-01A
0 years, female, asian, stage:Stage I, alive, 608 days
498.0
TCGA-FV-A3I1-01A
0 years, female, white, stage:Stage II, dead, 247 days
496.7
TCGA-G3-AAV0-01A
0 years, male, asian, stage:Stage I, alive, 476 days
495.0
TCGA-DD-AAVW-01A
0 years, male, asian, stage:Stage I, alive, 2317 days
494.1
TCGA-DD-AAD1-01A
0 years, female, asian, stage:Stage I, alive, 564 days
492.8
TCGA-ED-A8O6-01A
0 years, female, asian, stage:Stage IIIA, dead, 56 days
491.7
TCGA-ZS-A9CD-01A
0 years, male, white, stage:Stage II, dead, 1386 days
484.3
TCGA-K7-A5RF-01A
0 years, male, white, stage:Stage I, alive, 631 days
481.9
TCGA-BC-A69I-01A
0 years, male, white, stage:Stage I, alive, 387 days
481.5
TCGA-CC-5262-01A
0 years, male, asian, stage:Stage IIIC, dead, 103 days
475.8
TCGA-ZP-A9D4-01A
0 years, female, white, stage:'--, alive, 395 days
473.2
TCGA-DD-A1EK-01A
0 years, female, white, stage:Stage IVB, dead, 558 days
465.9
TCGA-FV-A2QQ-01A
0 years, male, white, stage:Stage I, alive, 729 days
465.9
TCGA-DD-A1EE-01A
0 years, male, white, stage:Stage IIIA, dead, 349 days
462.1
TCGA-DD-AACC-01A
0 years, male, asian, stage:Stage I, dead, 1685 days
460.1
TCGA-2Y-A9H4-01A
0 years, male, black or african american, stage:Stage I, alive, 1452 days
460.0
TCGA-BD-A2L6-01A
0 years, male, white, stage:'--, alive, 1363 days
458.1
TCGA-DD-A4NJ-01A
0 years, female, white, stage:Stage II, alive, 928 days
456.7
TCGA-ES-A2HS-01A
0 years, male, white, stage:Stage I, dead, 688 days
452.0
TCGA-CC-5261-01A
0 years, male, asian, stage:Stage II, dead, 97 days
450.1
TCGA-MI-A75C-01A
0 years, male, white, stage:Stage I, alive, 291 days
446.8
TCGA-DD-AAVU-01A
0 years, male, asian, stage:Stage II, alive, 2202 days
444.2
TCGA-DD-A4NL-01A
0 years, male, white, stage:Stage I, alive, 1711 days
443.7
TCGA-2Y-A9GS-01A
0 years, male, white, stage:'--, dead, 724 days
440.5
TCGA-G3-A3CJ-01A
0 years, male, american indian or alaska native, stage:Stage II, alive, 594 days
439.1
TCGA-CC-A3MC-01A
0 years, male, asian, stage:Stage IIIA, alive, 363 days
435.5
TCGA-DD-AAEE-01A
0 years, male, asian, stage:Stage I, alive, 810 days
432.2
TCGA-DD-A3A1-01A
0 years, male, stage:Stage IIIA, dead, 233 days
428.1
TCGA-G3-A25V-01A
0 years, male, white, stage:Stage I, alive, 860 days
424.4
TCGA-2Y-A9H6-01A
0 years, female, white, stage:Stage I, alive, 357 days
423.5
TCGA-RC-A7SF-01A
0 years, male, asian, stage:Stage I, alive, 579 days
422.3
TCGA-UB-A7MC-01A
0 years, male, white, stage:Stage IIIA, alive, 500 days
422.0
TCGA-DD-AADL-01A
0 years, male, asian, stage:Stage I, alive, 636 days
418.5
TCGA-WX-AA46-01A
0 years, male, white, stage:Stage II, alive, 756 days
417.3
TCGA-WX-AA44-01A
0 years, female, white, stage:Stage I, alive, 615 days
414.9
TCGA-2Y-A9GU-01A
0 years, female, white, stage:Stage I, alive, 1939 days
414.6
TCGA-DD-AAW2-01A
0 years, male, asian, stage:Stage I, alive, 1855 days
412.1
TCGA-G3-A7M7-01A
0 years, male, white, stage:Stage I, alive, 361 days
412.0
TCGA-DD-AAE6-01A
0 years, female, asian, stage:Stage I, alive, 141 days
411.6
TCGA-DD-AAD3-01A
0 years, male, asian, stage:Stage I, alive, 1295 days
411.6
TCGA-G3-AAV3-01A
0 years, female, white, stage:Stage II, alive, 412 days
408.0
TCGA-ZP-A9CZ-01A
0 years, male, asian, stage:'--, alive, 706 days
403.7
TCGA-DD-AAEH-01A
0 years, male, asian, stage:Stage I, alive, 784 days
401.6
TCGA-G3-AAV5-01A
0 years, male, white, stage:Stage II, alive, 354 days
394.6
TCGA-DD-AADQ-01A
0 years, male, asian, stage:Stage II, alive, 436 days
392.7
TCGA-2Y-A9GX-01A
0 years, male, white, stage:Stage I, alive, 2442 days
388.3
TCGA-DD-A4NK-01A
0 years, female, white, stage:Stage IIIA, dead, 1210 days
387.7
TCGA-BD-A3ER-01A
0 years, male, white, stage:Stage II, alive, 1115 days
386.4
TCGA-DD-AADR-01A
0 years, male, asian, stage:Stage I, alive, 2028 days
383.4
TCGA-DD-AADM-01A
0 years, male, asian, stage:Stage II, dead, 12 days
382.5
TCGA-G3-A5SL-01A
0 years, male, white, stage:Stage II, alive, 621 days
379.6
TCGA-BC-A10W-01A
0 years, male, asian, stage:'--, dead, 91 days
374.6
TCGA-HP-A5MZ-01A
0 years, male, stage:Stage I, dead, 91 days
373.6
TCGA-EP-A3JL-01A
0 years, male, white, stage:Stage I, alive, 303 days
372.7
TCGA-EP-A3RK-01A
0 years, male, white, stage:Stage IIIA, alive, 363 days
372.2
TCGA-LG-A9QD-01A
0 years, male, white, stage:Stage IIIA, alive, 366 days
369.4
TCGA-O8-A75V-01A
0 years, male, stage:Stage I, alive, 538 days
366.7
TCGA-EP-A2KB-01A
0 years, female, white, stage:Stage I, dead, 596 days
365.0
TCGA-KR-A7K0-01A
0 years, male, white, stage:Stage I, dead, 65 days
362.3
TCGA-DD-A4NS-01A
0 years, female, white, stage:Stage I, dead, 2456 days
356.8
TCGA-DD-A4NH-01A
0 years, female, white, stage:Stage IIIB, alive, 917 days
355.0
TCGA-2Y-A9HA-01A
0 years, male, white, stage:Stage II, dead, 36 days
354.4
TCGA-DD-AAED-01A
0 years, male, asian, stage:Stage I, alive, 763 days
351.2
TCGA-DD-AACI-01A
0 years, male, asian, stage:Stage II, alive, 1618 days
346.6
TCGA-DD-A4NB-01A
0 years, male, white, stage:Stage I, alive, 989 days
345.5
TCGA-BC-A10Y-01A
0 years, male, white, stage:'--, dead, 711 days
344.9
TCGA-DD-A4NI-01A
0 years, male, white, stage:Stage II, alive, 816 days
344.1
TCGA-WJ-A86L-01A
0 years, female, white, stage:Stage I, alive, 345 days
342.1
TCGA-CC-A8HU-01A
0 years, female, asian, stage:Stage IIIA, dead, 344 days
339.2
TCGA-DD-AACJ-01A
0 years, male, asian, stage:Stage II, alive, 2102 days
337.7
TCGA-DD-AADG-01A
0 years, male, asian, stage:Stage IIIA, alive, 1145 days
337.6
TCGA-DD-AADN-01A
0 years, male, asian, stage:Stage I, alive, 898 days
336.8
TCGA-RC-A6M5-01A
0 years, female, white, stage:Stage IVA, alive, 15 days
332.3
TCGA-2Y-A9GW-01A
0 years, male, white, stage:Stage I, dead, 1271 days
326.4
TCGA-DD-A73A-01A
0 years, male, white, stage:Stage I, alive, 728 days
320.7
TCGA-UB-A7MF-01A
0 years, male, white, stage:Stage IIIA, dead, 214 days
319.3
TCGA-DD-AAC8-01A
0 years, male, asian, stage:Stage I, dead, 16 days
316.9
TCGA-G3-A7M8-01A
0 years, male, asian, stage:Stage I, alive, 430 days
315.8
TCGA-T1-A6J8-01A
0 years, male, white, stage:'--, alive, 23 days
313.7
TCGA-DD-AADK-01A
0 years, female, asian, stage:Stage II, alive, 1049 days
312.5
TCGA-RC-A6M4-01A
0 years, female, white, stage:Stage IIIA, alive, 22 days
311.3
TCGA-DD-A73F-01A
0 years, female, white, stage:Stage I, alive, 1085 days
309.7
TCGA-RC-A7SK-01A
0 years, male, asian, stage:Stage I, alive, 472 days
306.5
TCGA-DD-AADB-01A
0 years, male, asian, stage:Stage I, alive, 1242 days
300.7
TCGA-ED-A97K-01A
0 years, male, asian, stage:Stage IIIA, alive, 6 days
298.9
TCGA-DD-AADI-01A
0 years, female, asian, stage:Stage I, alive, 1085 days
298.5
TCGA-ZS-A9CG-01A
0 years, male, white, stage:Stage II, alive, 341 days
298.3
TCGA-DD-A4NR-01A
0 years, female, white, stage:Stage I, dead, 9 days
296.6
TCGA-DD-A73D-01A
0 years, female, white, stage:Stage II, alive, 693 days
294.8
TCGA-5R-AA1D-01A
0 years, female, white, stage:Stage IIIA, alive, 449 days
290.3
TCGA-G3-A25Z-01A
0 years, male, asian, stage:Stage I, alive, 655 days
289.8
TCGA-QA-A7B7-01A
0 years, male, black or african american, stage:Stage II, alive, 94 days
287.1
TCGA-DD-A116-01A
0 years, male, asian, stage:Stage IIIA, dead, 1622 days
283.4
TCGA-GJ-A3OU-01A
0 years, male, white, stage:Stage I, alive, 879 days
281.5
TCGA-ED-A66X-01A
0 years, male, asian, stage:Stage IIIA, alive, 406 days
277.7
TCGA-KR-A7K2-01A
0 years, male, white, stage:Stage I, alive, 829 days
276.6
TCGA-DD-AACQ-01A
0 years, male, asian, stage:Stage II, dead, 432 days
270.7
TCGA-BC-A69H-01A
0 years, male, white, stage:Stage II, alive, 444 days
270.2
TCGA-G3-AAV1-01A
0 years, male, asian, stage:Stage IIIC, dead, 359 days
265.2
TCGA-ED-A7PY-01A
0 years, female, asian, stage:Stage II, alive, 390 days
261.9
TCGA-DD-AACN-01A
0 years, male, asian, stage:Stage I, alive, 1302 days
261.8
TCGA-DD-A4NN-01A
0 years, female, white, stage:Stage I, dead, 899 days
261.5
TCGA-EP-A2KA-01A
0 years, female, white, stage:Stage IIIA, dead, 627 days
261.5
TCGA-DD-AAVR-01A
0 years, male, asian, stage:Stage I, alive, 2513 days
257.9
TCGA-BC-A10Z-01A
0 years, female, white, stage:Stage I, dead, 34 days
252.8
TCGA-G3-A3CI-01A
0 years, male, white, stage:Stage I, alive, 180 days
251.8
TCGA-2Y-A9H1-01A
0 years, male, white, stage:Stage I, dead, 1229 days
250.0
TCGA-UB-A7MA-01A
0 years, female, white, stage:Stage II, alive, 848 days
247.9
TCGA-RG-A7D4-01A
0 years, male, black or african american, stage:Stage II, alive, 1098 days
247.6
TCGA-G3-A25S-01A
0 years, male, white, stage:Stage I, dead, 416 days
242.7
TCGA-BC-A112-01A
0 years, male, white, stage:'--, dead, 153 days
239.6
TCGA-KR-A7K7-01A
0 years, female, white, stage:Stage II, alive, 951 days
235.7
TCGA-CC-A9FS-01A
0 years, male, asian, stage:Stage II, alive, 211 days
233.5
TCGA-G3-A25Y-01A
0 years, female, asian, stage:Stage I, dead, 452 days
231.5
TCGA-G3-A25X-01A
0 years, male, asian, stage:Stage II, alive, 1779 days
230.6
TCGA-G3-AAV6-01A
0 years, female, white, stage:Stage IIIA, dead, 65 days
228.9
TCGA-DD-A39Y-01A
0 years, male, asian, stage:Stage I, dead, 171 days
225.6
TCGA-DD-A1EL-01A
0 years, male, black or african american, stage:Stage II, dead, 415 days
225.1
TCGA-CC-A3MB-01A
0 years, male, asian, stage:Stage IIIA, dead, 315 days
225.1
TCGA-KR-A7K8-01A
0 years, male, stage:Stage I, alive, 906 days
218.0
TCGA-CC-A7IF-01A
0 years, male, asian, stage:Stage IIIA, dead, 649 days
217.0
TCGA-CC-A8HS-01A
0 years, male, asian, stage:Stage IIIC, dead, 300 days
215.4
TCGA-DD-AACK-01A
0 years, male, asian, stage:Stage I, alive, 9 days
215.0
TCGA-DD-AADF-01A
0 years, female, asian, stage:Stage I, dead, 115 days
214.1
TCGA-DD-A39X-01A
0 years, female, white, stage:Stage I, dead, 1694 days
213.5
TCGA-DD-AAEI-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
212.6
TCGA-CC-A7IK-01A
0 years, male, asian, stage:Stage IIIA, dead, 262 days
211.7
TCGA-DD-A1EI-01A
0 years, male, asian, stage:Stage I, alive, 183 days
211.3
TCGA-G3-AAUZ-01A
0 years, male, stage:Stage I, alive, 480 days
208.3
TCGA-CC-A7IE-01A
0 years, male, asian, stage:Stage IIIA, dead, 217 days
204.9
TCGA-DD-A1EF-01A
0 years, female, white, stage:Stage I, dead, 394 days
203.4
TCGA-DD-AADD-01A
0 years, male, asian, stage:Stage I, alive, 1231 days
202.6
TCGA-RC-A7S9-01A
0 years, female, asian, stage:Stage I, alive, 640 days
200.4
TCGA-DD-AAW1-01A
0 years, male, asian, stage:Stage IIIA, alive, 1989 days
198.5
TCGA-CC-A9FW-01A
0 years, male, asian, stage:Stage IIIA, alive, 248 days
195.0
TCGA-DD-AADU-01A
0 years, male, asian, stage:Stage II, alive, 554 days
193.7
TCGA-DD-AACP-01A
0 years, male, asian, stage:Stage I, alive, 415 days
192.1
TCGA-DD-AACD-01A
0 years, male, asian, stage:Stage I, dead, 381 days
190.1
TCGA-G3-A7M6-01A
0 years, female, white, stage:Stage I, alive, 632 days
186.9
TCGA-DD-A1EH-01A
0 years, male, white, stage:Stage III, alive, 1495 days
186.8
TCGA-DD-AACG-01A
0 years, male, asian, stage:Stage II, dead, 469 days
186.6
TCGA-BC-A3KF-01A
0 years, female, white, stage:Stage I, alive, 8 days
186.2
TCGA-MR-A8JO-01A
0 years, male, white, stage:Stage I, alive, 330 days
184.1
TCGA-K7-AAU7-01A
0 years, male, white, stage:Stage II, alive, 359 days
183.2
TCGA-MR-A520-01A
0 years, male, white, stage:Stage I, alive, 229 days
183.0
TCGA-DD-A73E-01A
0 years, male, white, stage:Stage I, alive, 44 days
181.6
TCGA-RC-A7SH-01A
0 years, male, asian, stage:Stage II, alive, 468 days
177.1
TCGA-DD-AADC-01A
0 years, male, asian, stage:Stage I, dead, 425 days
176.1
TCGA-EP-A12J-01A
0 years, male, black or african american, stage:Stage I, alive, 570 days
172.9
TCGA-MI-A75H-01A
0 years, male, white, stage:'--, alive, 747 days
172.8
TCGA-DD-A119-01A
0 years, male, asian, stage:Stage IV, dead, 223 days
169.1
TCGA-DD-AADW-01A
0 years, male, asian, stage:Stage I, alive, 587 days
168.0
TCGA-WQ-AB4B-01A
0 years, male, white, stage:Stage II, alive, 395 days
166.3
TCGA-DD-AAVP-01A
0 years, male, asian, stage:Stage I, alive, 2752 days
166.2
TCGA-DD-AAEA-01A
0 years, male, asian, stage:Stage I, alive, 575 days
160.0
TCGA-G3-A7M5-01A
0 years, male, asian, stage:Stage I, alive, 447 days
158.9
TCGA-DD-A4NF-01A
0 years, male, white, stage:Stage I, alive, 942 days
155.6
TCGA-NI-A8LF-01A
0 years, male, white, stage:Stage I, alive, 799 days
150.9
TCGA-CC-5259-01A
0 years, female, asian, stage:Stage IIIC, alive, 250 days
147.9
TCGA-FV-A3R3-01A
0 years, female, white, stage:Stage I, dead, 366 days
147.2
TCGA-2Y-A9H2-01A
0 years, female, white, stage:Stage I, alive, 1731 days
146.2
TCGA-DD-AAE9-01A
0 years, male, asian, stage:Stage I, alive, 722 days
144.3
TCGA-CC-A123-01A
0 years, female, asian, stage:Stage IIIA, alive, 219 days
139.6
TCGA-2Y-A9H0-01A
0 years, male, white, stage:Stage IIIA, alive, 3675 days
134.8
TCGA-2Y-A9H3-01A
0 years, male, white, stage:Stage II, alive, 1516 days
134.4
TCGA-2Y-A9GY-01A
0 years, female, white, stage:Stage II, dead, 757 days
134.4
TCGA-ED-A5KG-01A
0 years, female, asian, stage:Stage II, alive, 854 days
131.7
TCGA-CC-A5UC-01A
0 years, male, asian, stage:Stage IIIA, dead, 347 days
129.2
TCGA-5C-AAPD-01A
0 years, male, asian, stage:Stage II, alive, 20 days
127.1
TCGA-XR-A8TD-01A
0 years, female, white, stage:Stage IIIB, alive, 1030 days
125.4
TCGA-WX-AA47-01A
0 years, female, white, stage:Stage IIIA, dead, 556 days
123.6
TCGA-DD-A114-01A
0 years, male, black or african american, stage:Stage II, dead, 1149 days
120.4
TCGA-DD-A73G-01A
0 years, female, white, stage:Stage I, alive, 3478 days
117.8
TCGA-CC-5258-01A
0 years, male, asian, stage:Stage II, dead, 129 days
115.7
TCGA-DD-AACL-01A
0 years, female, asian, stage:Stage I, dead, 107 days
114.2
TCGA-DD-A4NQ-01A
0 years, male, white, stage:Stage II, dead, 373 days
110.5
TCGA-DD-AACB-01A
0 years, female, asian, stage:Stage I, alive, 2324 days
98.8
TCGA-ED-A7PX-01A
0 years, female, asian, stage:Stage II, alive, 6 days
98.4
TCGA-DD-AADO-01A
0 years, male, asian, stage:Stage I, alive, 453 days
96.5
TCGA-DD-AAEB-01A
0 years, male, asian, stage:Stage I, alive, 478 days
95.6
TCGA-DD-AACO-01A
0 years, male, asian, stage:Stage I, alive, 1876 days
90.5
TCGA-G3-A7M9-01A
0 years, male, white, stage:Stage IIIB, dead, 56 days
89.4
TCGA-DD-A118-01A
0 years, female, white, stage:Stage II, alive, 3437 days
84.7
TCGA-DD-AACZ-01A
0 years, female, asian, stage:Stage I, dead, 171 days
84.6
TCGA-DD-AACE-01A
0 years, male, asian, stage:Stage I, alive, 2184 days
81.5
TCGA-DD-AAE0-01A
0 years, female, asian, stage:Stage IIIA, alive, 555 days
79.7
TCGA-DD-A3A7-01A
0 years, male, stage:Stage IIIB, dead, 419 days
67.1
TCGA-G3-A25T-01A
0 years, female, white, stage:Stage IIIA, alive, 1553 days
66.1
TCGA-FV-A4ZQ-01A
0 years, male, white, stage:Stage I, alive, 12 days
64.7
TCGA-YA-A8S7-01A
0 years, male, white, stage:Stage IIIA, dead, 412 days
63.2
TCGA-DD-AACA-01A
0 years, male, asian, stage:Stage I, alive, 2301 days
62.1
TCGA-CC-A8HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 140 days
62.0
TCGA-DD-A1EC-01A
0 years, female, white, stage:Stage I, alive, 602 days
58.2
TCGA-DD-AADS-01A
0 years, male, asian, stage:Stage I, alive, 474 days
52.0
TCGA-WQ-A9G7-01A
0 years, female, white, stage:'--, alive, 30 days
50.5
TCGA-5C-A9VG-01A
0 years, male, white, stage:Stage II, alive, 328 days
49.5
TCGA-CC-5263-01A
0 years, male, asian, stage:Stage IIIA, dead, 129 days
49.0
TCGA-ZP-A9D2-01A
0 years, male, white, stage:'--, dead, 765 days
47.8
TCGA-DD-AACH-01A
0 years, male, asian, stage:Stage II, dead, 195 days
47.5
TCGA-RC-A6M6-01A
0 years, male, white, stage:Stage II, alive, 9 days
45.3
TCGA-FV-A4ZP-01A
0 years, male, white, stage:Stage IIIA, dead, 2486 days
41.7
TCGA-G3-AAV7-01A
0 years, male, asian, stage:Stage II, alive, 361 days
40.2
TCGA-CC-A3MA-01A
0 years, male, asian, stage:Stage IIIA, dead, 303 days
39.8
TCGA-ED-A7PZ-01A
0 years, male, asian, stage:Stage II, alive, 6 days
36.3
TCGA-CC-A1HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 101 days
22.4
TCGA-FV-A3I0-01A
0 years, female, white, stage:Stage II, alive, 848 days
13.1
TCGA-DD-AAD5-01A
0 years, male, asian, stage:Stage I, alive, 1345 days
11.9
TCGA-DD-AA3A-01A
0 years, female, white, stage:Stage I, dead, 410 days
10.4
TCGA-CC-A5UD-01A
0 years, male, asian, stage:Stage IIIA, dead, 304 days
8.7
TCGA-BC-A10Q-01A
0 years, female, white, stage:'--, dead, 1135 days
3.6
TCGA-ED-A82E-01A
0 years, female, asian, stage:Stage IIIA, alive, 408 days
2.8
TCGA-DD-A4NA-01A
0 years, female, white, stage:Stage IIIC, alive, 1008 days
2.4
TCGA-DD-A3A6-01A
0 years, female, white, stage:Stage II, dead, 3258 days
1.2
TCGA-CC-5260-01A
0 years, female, asian, stage:Stage IIIC, dead, 87 days
1.1
TCGA-CC-A7II-01A
0 years, male, asian, stage:Stage IIIA, alive, 399 days
0.6
TCGA-CC-A7IJ-01A
0 years, male, asian, stage:Stage II, alive, 382 days
0.4
TCGA-CC-A3M9-01A
0 years, male, asian, stage:Stage IIIA, dead, 300 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
ITIH3 is potential prognostic, high expression is favorable in Liver Hepatocellular Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
624.9
Number of samples
231
Samples
Sample
Description
TPM
DO45199
0 years, female, NA, stage:2, alive, 1350 days
2433.6
DO45229
0 years, male, NA, stage:1, alive, 990 days
2187.3
DO50845
0 years, male, NA, stage:3, alive, 210 days
2165.9
DO45149
0 years, female, NA, stage:2, alive, 1260 days
2050.0
DO45159
0 years, male, NA, stage:3, alive, 1470 days
1941.9
DO23532
0 years, female, NA, stage:1, alive, 960 days
1923.2
DO45237
0 years, male, NA, stage:2, alive, 900 days
1917.9
DO45094
0 years, male, NA, stage:3, alive, 1650 days
1915.6
DO48721
0 years, female, NA, stage:1, alive, 900 days
1829.2
DO50832
0 years, male, NA, stage:3, alive, 90 days
1805.7
DO23548
0 years, female, NA, stage:1, alive, 840 days
1723.4
DO50819
0 years, female, NA, stage:2, alive, 510 days
1684.0
DO48715
0 years, female, NA, stage:2, dead, 690 days
1658.3
DO45239
0 years, male, NA, stage:2, alive, 870 days
1636.2
DO50850
0 years, male, NA, stage:3, alive, 720 days
1578.2
DO227801
0 years, female, NA, stage:1, alive, 660 days
1562.9
DO50806
0 years, male, NA, stage:4, alive, 540 days
1562.2
DO45241
0 years, male, NA, stage:1, alive, 1080 days
1511.1
DO23512
0 years, male, NA, stage:1, alive, 1260 days
1302.9
DO23550
0 years, male, NA, stage:1, alive, 990 days
1272.8
DO45121
0 years, male, NA, stage:3, alive, 1530 days
1272.1
DO50813
0 years, male, NA, stage:2, alive, 420 days
1249.7
DO45261
0 years, male, NA, stage:3, alive, 990 days
1241.3
DO23516
0 years, male, NA, stage:3, dead, 20 days
1226.8
DO23544
0 years, male, NA, stage:2, alive, 960 days
1220.6
DO23525
0 years, male, NA, stage:4, alive, 1050 days
1199.1
DO23511
0 years, female, NA, stage:3, dead, 180 days
1191.8
DO45131
0 years, male, NA, stage:4, dead, 360 days
1181.6
DO23538
0 years, male, NA, stage:2, alive, 450 days
1165.7
DO45183
0 years, female, NA, stage:2, dead, 570 days
1157.0
DO45167
0 years, male, NA, stage:2, dead, 1440 days
1144.6
DO50818
0 years, male, NA, stage:2, alive, 510 days
1131.5
DO23540
0 years, male, NA, stage:1, alive, 750 days
1122.5
DO50787
0 years, male, NA, stage:3, alive, 480 days
1100.3
DO48706
0 years, male, NA, stage:2, alive, 870 days
1095.2
DO23536
0 years, male, NA, stage:2, alive, 930 days
1084.2
DO48760
0 years, female, NA, stage:2, alive, 690 days
1080.8
DO50776
0 years, male, NA, stage:1, alive, 690 days
1020.1
DO45095
0 years, male, NA, stage:2, alive, 1620 days
1015.3
DO23518
0 years, male, NA, stage:2, alive, 1320 days
997.9
DO45269
0 years, male, NA, stage:3, alive, 750 days
995.2
DO50820
0 years, female, NA, stage:3, alive, 510 days
985.4
DO45273
0 years, male, NA, stage:2, alive, 480 days
976.7
DO23543
0 years, male, NA, stage:2, alive, 1020 days
972.9
DO45096
0 years, male, NA, stage:2, dead, 1290 days
967.2
DO48712
0 years, male, NA, stage:2, alive, 810 days
961.4
DO23545
0 years, male, NA, stage:2, dead, 570 days
959.4
DO45111
0 years, male, NA, stage:2, alive, 1590 days
923.0
DO50857
0 years, male, NA, stage:2, alive, 210 days
921.8
DO23527
0 years, male, NA, stage:1, alive, 1050 days
911.4
DO45247
0 years, female, NA, stage:2, alive, 210 days
898.6
DO23551
0 years, male, NA, stage:3, dead, 150 days
892.0
DO23529
0 years, male, NA, stage:4, alive, 930 days
883.5
DO23541
0 years, male, NA, stage:2, alive, 930 days
881.5
DO45107
0 years, female, NA, stage:2, alive, 1710 days
880.0
DO45215
0 years, male, NA, stage:2, alive, 1170 days
878.1
DO45169
0 years, male, NA, stage:3, alive, 1350 days
867.6
DO45097
0 years, male, NA, stage:3, alive, 1620 days
865.5
DO48677
0 years, male, NA, stage:3, alive, 1140 days
863.3
DO45091
0 years, male, NA, stage:2, dead, 1320 days
861.1
DO45179
0 years, female, NA, stage:2, alive, 600 days
860.0
DO45191
0 years, female, NA, stage:2, alive, 1200 days
850.4
DO50804
0 years, male, NA, stage:2, alive, 720 days
849.6
DO50811
0 years, male, NA, stage:1, alive, 450 days
822.9
DO50807
0 years, male, NA, stage:1, alive, 540 days
820.5
DO23546
0 years, male, NA, stage:2, alive, 1050 days
820.3
DO45123
0 years, female, NA, stage:2, dead, 570 days
819.1
DO50839
0 years, female, NA, stage:3, alive, 330 days
818.1
DO48725
0 years, male, NA, stage:1, alive, 780 days
817.6
DO48736
0 years, female, NA, stage:1, alive, 600 days
815.5
DO48733
0 years, male, NA, stage:2, alive, 600 days
805.1
DO50803
0 years, female, NA, stage:1, alive, 540 days
797.4
DO45113
0 years, male, NA, stage:3, alive, 1560 days
791.9
DO23510
0 years, female, NA, stage:2, alive, 870 days
790.5
DO45117
0 years, female, NA, stage:2, dead, 1110 days
785.6
DO48704
0 years, female, NA, stage:3, alive, 750 days
769.7
DO50800
0 years, male, NA, stage:2, alive, 510 days
756.0
DO50859
0 years, male, NA, stage:2, alive, 180 days
749.0
DO45103
0 years, male, NA, stage:3, alive, 450 days
744.8
DO45195
0 years, male, NA, stage:1, alive, 390 days
734.2
DO50822
0 years, male, NA, stage:2, alive, 510 days
730.2
DO45175
0 years, male, NA, stage:2, alive, 1140 days
729.5
DO48674
0 years, male, NA, stage:2, alive, 1260 days
726.5
DO23531
0 years, female, NA, stage:3, alive, 900 days
717.7
DO50802
0 years, male, NA, stage:2, alive, 930 days
712.9
DO48746
0 years, male, NA, stage:3, alive, 570 days
702.4
DO50855
0 years, male, NA, stage:2, alive, 570 days
700.4
DO227643
0 years, male, NA, stage:2, alive, 1260 days
682.2
DO45265
0 years, male, NA, stage:3, alive, 1020 days
674.5
DO45125
0 years, male, NA, stage:3, alive, 1680 days
669.0
DO23517
0 years, male, NA, stage:2, alive, 1200 days
665.5
DO23537
0 years, male, NA, stage:2, dead, 900 days
641.3
DO48701
0 years, male, NA, stage:2, alive, 780 days
639.7
DO48679
0 years, male, NA, stage:2, alive, 1200 days
631.6
DO50844
0 years, male, NA, stage:4, alive, 300 days
631.2
DO48697
0 years, female, NA, stage:2, dead, 810 days
624.3
DO50816
0 years, male, NA, stage:2, alive, 390 days
597.2
DO23534
0 years, male, NA, stage:2, alive, 840 days
596.7
DO50783
0 years, male, NA, stage:3, alive, 480 days
596.5
DO48723
0 years, male, NA, stage:1, alive, 600 days
588.3
DO45141
0 years, male, NA, stage:2, alive, 1320 days
564.8
DO48743
0 years, female, NA, stage:2, alive, 570 days
563.5
DO50840
0 years, male, NA, stage:2, alive, 330 days
549.1
DO45231
0 years, male, NA, stage:2, alive, 930 days
549.0
DO48693
0 years, male, NA, stage:2, alive, 900 days
546.6
DO45281
0 years, male, NA, stage:4, alive, 750 days
541.0
DO45129
0 years, male, NA, stage:3, alive, 1470 days
540.5
DO45213
0 years, male, NA, stage:1, alive, 1200 days
534.1
DO50789
0 years, female, NA, stage:2, alive, 570 days
528.1
DO48741
0 years, male, NA, stage:3, alive, 240 days
525.4
DO48757
0 years, female, NA, stage:3, alive, 480 days
525.2
DO50791
0 years, female, NA, stage:1, dead, 480 days
525.1
DO45203
0 years, female, NA, stage:2, alive, 1170 days
525.0
DO45163
0 years, male, NA, stage:2, alive, 960 days
520.6
DO45143
0 years, male, NA, stage:3, alive, 1290 days
518.9
DO23514
0 years, male, NA, stage:2, alive, 1290 days
513.8
DO45181
0 years, female, NA, stage:2, alive, 1200 days
511.7
DO45187
0 years, female, NA, stage:1, alive, 1260 days
509.7
DO50793
0 years, male, NA, stage:4, alive, 540 days
507.3
DO45263
0 years, male, NA, stage:3, dead, 270 days
504.7
DO50774
0 years, female, NA, stage:2, alive, 720 days
503.7
DO45137
0 years, male, NA, stage:1, alive, 1320 days
491.7
DO45225
0 years, male, NA, stage:1, alive, 1050 days
489.0
DO45201
0 years, male, NA, stage:1, alive, 900 days
488.2
DO45157
0 years, male, NA, stage:2, alive, 1980 days
485.7
DO45099
0 years, male, NA, stage:3, alive, 1590 days
485.6
DO45233
0 years, male, NA, stage:3, alive, 900 days
479.3
DO45227
0 years, female, NA, stage:2, alive, 1020 days
475.8
DO50798
0 years, male, NA, stage:3, dead, 30 days
470.1
DO23552
0 years, female, NA, stage:1, alive, 810 days
469.5
DO50805
0 years, male, NA, stage:2, alive, 690 days
461.7
DO45207
0 years, male, NA, stage:1, alive, 1050 days
460.5
DO45155
0 years, male, NA, stage:2, alive, 2160 days
457.4
DO23528
0 years, female, NA, stage:2, alive, 1020 days
454.8
DO45235
0 years, female, NA, stage:1, alive, 900 days
454.0
DO45253
0 years, male, NA, stage:2, alive, 870 days
447.9
DO45135
0 years, male, NA, stage:1, alive, 1410 days
446.2
DO45209
0 years, male, NA, stage:4, alive, 1350 days
434.7
DO48716
0 years, male, NA, stage:2, alive, 720 days
432.5
DO23509
0 years, male, NA, stage:3, dead, 780 days
430.4
DO50817
0 years, male, NA, stage:2, alive, 390 days
429.9
DO48695
0 years, male, NA, stage:2, alive, 720 days
427.3
DO45255
0 years, male, NA, stage:3, alive, 720 days
425.8
DO45197
0 years, male, NA, stage:2, alive, 1170 days
425.1
DO45101
0 years, male, NA, stage:2, alive, 1680 days
424.7
DO45109
0 years, male, NA, stage:2, alive, 1590 days
420.3
DO45115
0 years, male, NA, stage:2, alive, 840 days
418.6
DO45153
0 years, female, NA, stage:2, alive, 1380 days
418.3
DO50809
0 years, male, NA, stage:3, dead, 720 days
410.4
DO45223
0 years, male, NA, stage:4, alive, 1020 days
408.2
DO48727
0 years, female, NA, stage:2, dead, 390 days
391.6
DO23533
0 years, male, NA, stage:2, alive, 900 days
382.6
DO48730
0 years, female, NA, stage:2, alive, 630 days
382.2
DO45105
0 years, male, NA, stage:1, alive, 1680 days
381.0
DO45177
0 years, female, NA, stage:3, alive, 1260 days
380.7
DO45221
0 years, female, NA, stage:4, dead, 390 days
378.7
DO45173
0 years, male, NA, stage:3, alive, 1170 days
373.4
DO48719
0 years, male, NA, stage:2, alive, 690 days
369.8
DO45165
0 years, male, NA, stage:2, alive, 690 days
357.8
DO48742
0 years, male, NA, stage:2, alive, 600 days
354.9
DO23539
0 years, male, NA, stage:1, alive, 1110 days
344.8
DO23535
0 years, male, NA, stage:1, alive, 960 days
341.0
DO48681
0 years, male, NA, stage:2, alive, 900 days
339.2
DO48761
0 years, male, NA, stage:2, alive, 870 days
333.6
DO48700
0 years, female, NA, stage:2, alive, 810 days
333.3
DO48737
0 years, male, NA, stage:1, alive, 720 days
330.2
DO50814
0 years, male, NA, stage:3, alive, 420 days
327.8
DO23524
0 years, female, NA, stage:2, alive, 1050 days
327.7
DO23542
0 years, male, NA, stage:3, alive, 960 days
325.9
DO45092
0 years, male, NA, stage:4, dead, 1200 days
322.2
DO50778
0 years, male, NA, stage:4, alive, 630 days
313.9
DO48717
0 years, male, NA, stage:4, dead, 180 days
286.7
DO50799
0 years, female, NA, stage:2, alive, 540 days
276.1
DO48732
0 years, male, NA, stage:3, alive, 630 days
275.9
DO48682
0 years, female, NA, stage:3, dead, 120 days
257.4
DO50785
0 years, male, NA, stage:4, dead, 90 days
254.9
DO45161
0 years, male, NA, stage:2, dead, 540 days
253.4
DO48672
0 years, male, NA, stage:2, alive, 450 days
249.7
DO45133
0 years, male, NA, stage:3, dead, 660 days
248.8
DO45257
0 years, male, NA, stage:3, alive, 810 days
244.0
DO48759
0 years, male, NA, stage:3, alive, 720 days
242.5
DO45243
0 years, female, NA, stage:3, alive, 930 days
229.7
DO45171
0 years, male, NA, stage:3, alive, 600 days
218.3
DO45193
0 years, female, NA, stage:4, dead, 120 days
216.7
DO45093
0 years, male, NA, stage:2, dead, 720 days
215.6
DO50808
0 years, male, NA, stage:2, alive, 570 days
215.3
DO23547
0 years, male, NA, stage:1, alive, 1020 days
208.4
DO23515
0 years, male, NA, stage:2, alive, 1230 days
191.5
DO48751
0 years, male, NA, stage:2, dead, 480 days
180.1
DO50815
0 years, male, NA, stage:3, alive, 150 days
169.6
DO45219
0 years, male, NA, stage:2, alive, 1080 days
166.7
DO50825
0 years, male, NA, stage:2, alive, 390 days
164.9
DO23549
0 years, male, NA, stage:3, alive, 990 days
162.1
DO45217
0 years, female, NA, stage:3, dead, 270 days
145.4
DO45139
0 years, male, NA, stage:3, alive, 1320 days
138.1
DO45267
0 years, male, NA, stage:3, dead, 570 days
132.6
DO45119
0 years, male, NA, stage:3, dead, 510 days
127.3
DO23513
0 years, male, NA, stage:3, alive, 1200 days
125.6
DO48720
0 years, female, NA, stage:2, alive, 570 days
107.1
DO45301
0 years, male, NA, stage:2, dead, 1440 days
101.4
DO23530
0 years, male, NA, stage:4, dead, 180 days
99.4
DO48728
0 years, female, NA, stage:2, alive, 150 days
96.7
DO45249
0 years, male, NA, stage:1, alive, 630 days
68.7
DO23508
0 years, female, NA, stage:2, alive, 390 days
67.0
DO23526
0 years, male, NA, stage:3, alive, 1050 days
65.6
DO23521
0 years, male, NA, stage:3, alive, 1110 days
58.3
DO45251
0 years, female, NA, stage:2, alive, 900 days
57.8
DO48747
0 years, male, NA, stage:3, alive, 540 days
47.5
DO23519
0 years, male, NA, stage:3, alive, 630 days
45.8
DO45185
0 years, male, NA, stage:2, alive, 600 days
43.4
DO50829
0 years, male, NA, stage:3, alive, 570 days
36.3
DO45259
0 years, male, NA, stage:3, alive, 330 days
29.8
DO45283
0 years, male, NA, stage:3, alive, 510 days
22.4
DO45305
0 years, male, NA, stage:4, alive, 300 days
21.2
DO45275
0 years, male, NA, stage:3, dead, 10 days
20.5
DO45205
0 years, female, NA, stage:2, dead, 90 days
14.2
DO45287
0 years, male, NA, stage:1, alive, 390 days
11.6
DO45145
0 years, male, NA, stage:3, dead, 60 days
8.5
DO45127
0 years, male, NA, stage:3, dead, 420 days
5.8
DO45279
0 years, male, NA, stage:3, alive, 1290 days
5.4
DO45285
0 years, male, NA, stage:3, alive, 480 days
3.6
DO45289
0 years, female, NA, stage:3, alive, 360 days
3.0
DO45297
0 years, female, NA, stage:4, dead, 1260 days
2.4
DO45189
0 years, female, NA, stage:2, alive, 1200 days
2.3
DO45245
0 years, female, NA, stage:2, dead, 240 days
2.1
DO45277
0 years, male, NA, stage:3, alive, 600 days
1.8
DO23523
0 years, male, NA, stage:3, alive, 1080 days
1.4
DO45307
0 years, female, NA, stage:4, dead, 240 days
1.4
DO45299
0 years, female, NA, stage:1, alive, 1440 days
1.3
DO45303
0 years, female, NA, stage:3, alive, 990 days
1.1
DO45211
0 years, male, NA, stage:3, alive, 240 days
0.3
Show allShow less
LIVER HEPATOCELLULAR CARCINOMA - Protein relative expression (CPTAC)
Number of samples
330
Samples
Sample ID
Sample type
nRPX
813
Tumor
2.4
425
Tumor
2.0
393
Tumor
1.7
573
Tumor
1.6
343
Tumor
1.5
112
Tumor
1.4
863
Tumor
1.3
877
Tumor
1.3
221
Tumor
1.2
523
Tumor
1.2
445
Tumor
1.2
647
Tumor
1.1
223
Tumor
1.0
937
Tumor
1.0
883
Tumor
1.0
567
Tumor
0.9
487
Tumor
0.9
463
Tumor
0.8
471
Tumor
0.8
217
Tumor
0.8
125
Tumor
0.8
817
Tumor
0.8
983
Tumor
0.8
135
Tumor
0.8
665
Tumor
0.8
921
Tumor
0.8
975
Tumor
0.8
814
Normal
0.7
641
Tumor
0.7
953
Tumor
0.7
227
Tumor
0.7
713
Tumor
0.7
218
Normal
0.7
224
Normal
0.6
745
Tumor
0.6
981
Tumor
0.6
443
Tumor
0.6
431
Tumor
0.5
743
Tumor
0.5
1041
Tumor
0.5
192
Normal
0.5
671
Tumor
0.5
113
Tumor
0.5
451
Tumor
0.5
695
Tumor
0.5
697
Tumor
0.5
963
Tumor
0.4
1045
Tumor
0.4
185
Tumor
0.4
271
Tumor
0.4
696
Normal
0.4
423
Tumor
0.4
433
Tumor
0.4
851
Tumor
0.4
375
Tumor
0.4
392
Normal
0.3
137
Tumor
0.3
1044
Normal
0.3
387
Tumor
0.3
727
Tumor
0.3
1025
Tumor
0.3
524
Normal
0.3
741
Tumor
0.2
635
Tumor
0.2
497
Tumor
0.2
617
Tumor
0.2
1026
Normal
0.2
857
Tumor
0.2
228
Normal
0.2
384
Normal
0.2
574
Normal
0.2
977
Tumor
0.2
553
Tumor
0.2
568
Normal
0.2
426
Normal
0.2
685
Tumor
0.2
391
Tumor
0.2
386
Normal
0.2
444
Normal
0.1
187
Tumor
0.1
364
Normal
0.1
1046
Normal
0.1
344
Normal
0.1
186
Normal
0.1
672
Normal
0.1
737
Tumor
0.1
818
Normal
0.1
388
Normal
0.1
715
Tumor
0.1
1043
Tumor
0.1
352
Normal
0.1
925
Tumor
0.1
124
Normal
0.1
777
Tumor
0.1
367
Tumor
0.1
984
Normal
0.1
191
Tumor
0.1
924
Normal
0.1
267
Tumor
0.1
383
Tumor
0.1
161
Tumor
0.1
357
Tumor
0.1
286
Normal
0.1
663
Tumor
0.1
414
Normal
0.0
954
Normal
0.0
526
Normal
0.0
615
Tumor
0.0
434
Normal
0.0
744
Normal
0.0
394
Normal
0.0
332
Normal
0.0
536
Normal
0.0
1022
Normal
0.0
563
Tumor
0.0
467
Tumor
0.0
686
Normal
0.0
514
Normal
0.0
411
Tumor
0.0
354
Normal
0.0
435
Tumor
0.0
142
Normal
0.0
396
Normal
0.0
716
Normal
0.0
913
Tumor
0.0
232
Normal
0.0
421
Tumor
0.0
331
Tumor
0.0
342
Normal
0.0
358
Normal
0.0
545
Tumor
0.0
111
Normal
0.0
424
Normal
0.0
873
Tumor
-0.1
572
Normal
-0.1
114
Normal
-0.1
926
Normal
-0.1
363
Tumor
-0.1
452
Normal
-0.1
557
Tumor
-0.1
723
Tumor
-0.1
488
Normal
-0.1
446
Normal
-0.1
1015
Tumor
-0.1
284
Normal
-0.1
195
Tumor
-0.1
564
Normal
-0.1
368
Normal
-0.1
862
Normal
-0.1
722
Normal
-0.1
141
Tumor
-0.1
636
Normal
-0.1
956
Normal
-0.1
785
Tumor
-0.1
447
Tumor
-0.1
448
Normal
-0.1
918
Normal
-0.1
778
Normal
-0.1
212
Normal
-0.1
261
Tumor
-0.1
515
Tumor
-0.1
277
Tumor
-0.1
498
Normal
-0.1
923
Tumor
-0.1
915
Tumor
-0.1
916
Normal
-0.1
742
Normal
-0.1
376
Normal
-0.1
917
Tumor
-0.1
538
Normal
-0.1
951
Tumor
-0.1
755
Tumor
-0.1
465
Tumor
-0.1
123
Tumor
-0.1
958
Normal
-0.2
1031
Tumor
-0.2
571
Tumor
-0.2
982
Normal
-0.2
816
Normal
-0.2
884
Normal
-0.2
881
Tumor
-0.2
666
Normal
-0.2
978
Normal
-0.2
527
Tumor
-0.2
494
Normal
-0.2
365
Tumor
-0.2
558
Normal
-0.2
283
Tumor
-0.2
1042
Normal
-0.2
432
Normal
-0.2
922
Normal
-0.2
516
Normal
-0.2
353
Tumor
-0.2
126
Normal
-0.2
361
Tumor
-0.2
528
Normal
-0.2
756
Normal
-0.2
517
Tumor
-0.2
815
Tumor
-0.2
964
Normal
-0.2
481
Tumor
-0.2
478
Normal
-0.2
966
Normal
-0.2
422
Normal
-0.2
196
Normal
-0.2
327
Tumor
-0.2
131
Tumor
-0.2
341
Tumor
-0.2
1016
Normal
-0.2
395
Tumor
-0.3
618
Normal
-0.3
468
Normal
-0.3
456
Normal
-0.3
943
Tumor
-0.3
642
Normal
-0.3
746
Normal
-0.3
554
Normal
-0.3
474
Normal
-0.3
882
Normal
-0.3
698
Normal
-0.3
138
Normal
-0.3
1032
Normal
-0.3
914
Normal
-0.3
428
Normal
-0.3
627
Tumor
-0.3
861
Tumor
-0.3
628
Normal
-0.3
662
Normal
-0.3
728
Normal
-0.3
314
Normal
-0.3
355
Tumor
-0.3
1028
Normal
-0.3
858
Normal
-0.3
268
Normal
-0.3
1021
Tumor
-0.3
957
Tumor
-0.3
852
Normal
-0.3
285
Tumor
-0.3
525
Tumor
-0.3
415
Tumor
-0.3
362
Normal
-0.3
955
Tumor
-0.3
534
Normal
-0.3
738
Normal
-0.3
214
Normal
-0.3
786
Normal
-0.4
262
Normal
-0.4
146
Normal
-0.4
222
Normal
-0.4
127
Tumor
-0.4
145
Tumor
-0.4
366
Normal
-0.4
952
Normal
-0.4
823
Tumor
-0.4
648
Normal
-0.4
464
Normal
-0.4
546
Normal
-0.4
492
Normal
-0.4
436
Normal
-0.4
968
Normal
-0.4
616
Normal
-0.4
312
Normal
-0.4
721
Tumor
-0.4
148
Normal
-0.4
664
Normal
-0.4
258
Normal
-0.4
466
Normal
-0.4
1014
Normal
-0.4
172
Normal
-0.4
128
Normal
-0.4
413
Tumor
-0.4
171
Tumor
-0.5
864
Normal
-0.5
272
Normal
-0.5
938
Normal
-0.5
944
Normal
-0.5
147
Tumor
-0.5
518
Normal
-0.5
535
Tumor
-0.5
427
Tumor
-0.5
213
Tumor
-0.5
385
Tumor
-0.5
1027
Tumor
-0.5
278
Normal
-0.5
412
Normal
-0.5
298
Normal
-0.5
188
Normal
-0.5
866
Normal
-0.5
416
Normal
-0.5
462
Normal
-0.5
162
Normal
-0.5
513
Tumor
-0.5
257
Tumor
-0.5
297
Tumor
-0.5
491
Tumor
-0.5
328
Normal
-0.6
714
Normal
-0.6
976
Normal
-0.6
865
Tumor
-0.6
132
Normal
-0.6
472
Normal
-0.6
483
Tumor
-0.6
455
Tumor
-0.6
533
Tumor
-0.6
724
Normal
-0.6
477
Tumor
-0.6
874
Normal
-0.6
878
Normal
-0.6
967
Tumor
-0.6
461
Tumor
-0.7
484
Normal
-0.7
482
Normal
-0.7
868
Normal
-0.7
965
Tumor
-0.7
824
Normal
-0.7
231
Tumor
-0.7
313
Tumor
-0.7
912
Normal
-0.7
493
Tumor
-0.7
867
Tumor
-0.7
136
Normal
-0.7
356
Normal
-0.7
351
Tumor
-0.7
1013
Tumor
-0.9
311
Tumor
-0.9
211
Tumor
-1.1
661
Tumor
-1.1
537
Tumor
-1.1
911
Tumor
-1.4
473
Tumor
-1.4
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LIVER CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.