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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
TAF6L is not prognostic in Liver Hepatocellular Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
9.3
Number of samples
362
Samples
Sample
Description
TPM
TCGA-FV-A4ZQ-01A
0 years, male, white, stage:Stage I, alive, 12 days
24.0
TCGA-DD-A115-01A
0 years, male, white, stage:Stage IIIA, dead, 2542 days
20.6
TCGA-G3-AAV0-01A
0 years, male, asian, stage:Stage I, alive, 476 days
19.6
TCGA-LG-A9QC-01A
0 years, male, white, stage:Stage I, alive, 425 days
18.5
TCGA-G3-A7M9-01A
0 years, male, white, stage:Stage IIIB, dead, 56 days
18.0
TCGA-MI-A75I-01A
0 years, male, black or african american, stage:'--, alive, 630 days
17.9
TCGA-GJ-A9DB-01A
0 years, male, white, stage:Stage I, dead, 67 days
17.8
TCGA-DD-A73E-01A
0 years, male, white, stage:Stage I, alive, 44 days
17.7
TCGA-FV-A3R2-01A
0 years, male, white, stage:Stage I, dead, 194 days
17.7
TCGA-EP-A12J-01A
0 years, male, black or african american, stage:Stage I, alive, 570 days
17.6
TCGA-G3-AAV4-01A
0 years, female, white, stage:Stage I, dead, 27 days
16.9
TCGA-2Y-A9H8-01A
0 years, female, white, stage:'--, dead, 633 days
16.7
TCGA-2Y-A9H0-01A
0 years, male, white, stage:Stage IIIA, alive, 3675 days
16.7
TCGA-DD-A114-01A
0 years, male, black or african american, stage:Stage II, dead, 1149 days
16.5
TCGA-CC-A9FW-01A
0 years, male, asian, stage:Stage IIIA, alive, 248 days
16.3
TCGA-DD-A116-01A
0 years, male, asian, stage:Stage IIIA, dead, 1622 days
16.2
TCGA-CC-A8HS-01A
0 years, male, asian, stage:Stage IIIC, dead, 300 days
16.2
TCGA-WQ-A9G7-01A
0 years, female, white, stage:'--, alive, 30 days
15.9
TCGA-BC-A3KG-01A
0 years, female, white, stage:Stage II, alive, 680 days
15.8
TCGA-ED-A7XO-01A
0 years, male, asian, stage:Stage IIIA, alive, 427 days
15.8
TCGA-CC-A5UE-01A
0 years, male, asian, stage:Stage IIIB, dead, 272 days
15.8
TCGA-MI-A75H-01A
0 years, male, white, stage:'--, alive, 747 days
15.5
TCGA-DD-A4NS-01A
0 years, female, white, stage:Stage I, dead, 2456 days
15.3
TCGA-G3-A7M6-01A
0 years, female, white, stage:Stage I, alive, 632 days
15.0
TCGA-EP-A3RK-01A
0 years, male, white, stage:Stage IIIA, alive, 363 days
14.8
TCGA-DD-AADV-01A
0 years, male, asian, stage:Stage I, alive, 574 days
14.7
TCGA-DD-AAC8-01A
0 years, male, asian, stage:Stage I, dead, 16 days
14.7
TCGA-DD-AADL-01A
0 years, male, asian, stage:Stage I, alive, 636 days
14.6
TCGA-DD-AADG-01A
0 years, male, asian, stage:Stage IIIA, alive, 1145 days
14.6
TCGA-4R-AA8I-01A
0 years, male, white, stage:Stage II, dead, 262 days
14.6
TCGA-G3-AAV2-01A
0 years, male, white, stage:Stage I, alive, 372 days
14.5
TCGA-DD-AAVY-01A
0 years, male, asian, stage:Stage IIIA, alive, 1970 days
14.3
TCGA-G3-AAV3-01A
0 years, female, white, stage:Stage II, alive, 412 days
14.2
TCGA-BC-A10Y-01A
0 years, male, white, stage:'--, dead, 711 days
14.2
TCGA-UB-A7MB-01A
0 years, male, white, stage:Stage II, alive, 601 days
14.1
TCGA-DD-A4NV-01A
0 years, male, white, stage:Stage IIIA, alive, 2398 days
14.1
TCGA-UB-A7MA-01A
0 years, female, white, stage:Stage II, alive, 848 days
14.1
TCGA-DD-AAD0-01A
0 years, female, asian, stage:Stage I, alive, 137 days
14.0
TCGA-DD-A4NH-01A
0 years, female, white, stage:Stage IIIB, alive, 917 days
13.9
TCGA-G3-A7M5-01A
0 years, male, asian, stage:Stage I, alive, 447 days
13.8
TCGA-DD-AACU-01A
0 years, male, asian, stage:Stage I, alive, 1567 days
13.8
TCGA-DD-AACQ-01A
0 years, male, asian, stage:Stage II, dead, 432 days
13.7
TCGA-DD-AAVP-01A
0 years, male, asian, stage:Stage I, alive, 2752 days
13.7
TCGA-DD-AADW-01A
0 years, male, asian, stage:Stage I, alive, 587 days
13.7
TCGA-QA-A7B7-01A
0 years, male, black or african american, stage:Stage II, alive, 94 days
13.7
TCGA-DD-AACA-01A
0 years, male, asian, stage:Stage I, alive, 2301 days
13.6
TCGA-GJ-A6C0-01A
0 years, female, white, stage:Stage II, dead, 31 days
13.6
TCGA-CC-5261-01A
0 years, male, asian, stage:Stage II, dead, 97 days
13.5
TCGA-XR-A8TG-01A
0 years, male, white, stage:Stage I, alive, 898 days
13.4
TCGA-BC-A217-01A
0 years, female, white, stage:Stage II, dead, 1397 days
13.4
TCGA-FV-A3I1-01A
0 years, female, white, stage:Stage II, dead, 247 days
13.3
TCGA-DD-A4NE-01A
0 years, female, white, stage:Stage IIIA, dead, 660 days
13.3
TCGA-DD-AACH-01A
0 years, male, asian, stage:Stage II, dead, 195 days
13.2
TCGA-DD-A4NK-01A
0 years, female, white, stage:Stage IIIA, dead, 1210 days
13.1
TCGA-DD-AAE0-01A
0 years, female, asian, stage:Stage IIIA, alive, 555 days
13.1
TCGA-3K-AAZ8-01A
0 years, male, black or african american, stage:Stage IIIB, alive, 396 days
13.1
TCGA-CC-A8HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 140 days
13.0
TCGA-2Y-A9H7-01A
0 years, female, white, stage:Stage I, alive, 1168 days
13.0
TCGA-CC-A7II-01A
0 years, male, asian, stage:Stage IIIA, alive, 399 days
12.9
TCGA-MI-A75G-01A
0 years, male, white, stage:Stage II, alive, 698 days
12.8
TCGA-CC-A3M9-01A
0 years, male, asian, stage:Stage IIIA, dead, 300 days
12.8
TCGA-BC-A10Z-01A
0 years, female, white, stage:Stage I, dead, 34 days
12.8
TCGA-CC-A7IG-01A
0 years, male, asian, stage:Stage II, dead, 299 days
12.6
TCGA-DD-A1EA-01A
0 years, male, asian, stage:Stage II, alive, 2415 days
12.6
TCGA-ED-A7PX-01A
0 years, female, asian, stage:Stage II, alive, 6 days
12.6
TCGA-DD-A3A8-01A
0 years, male, white, stage:Stage II, dead, 11 days
12.5
TCGA-G3-A6UC-01A
0 years, male, white, stage:Stage IIIB, alive, 671 days
12.5
TCGA-RC-A7SK-01A
0 years, male, asian, stage:Stage I, alive, 472 days
12.5
TCGA-DD-A3A5-01A
0 years, female, white, stage:Stage III, dead, 3125 days
12.4
TCGA-2Y-A9HB-01A
0 years, male, stage:Stage I, alive, 260 days
12.4
TCGA-2Y-A9GZ-01A
0 years, female, white, stage:Stage II, dead, 848 days
12.4
TCGA-DD-AACS-01A
0 years, male, asian, stage:Stage I, alive, 1804 days
12.3
TCGA-ZS-A9CF-01A
0 years, male, white, stage:Stage II, alive, 2412 days
12.3
TCGA-ZP-A9D2-01A
0 years, male, white, stage:'--, dead, 765 days
12.3
TCGA-DD-AADD-01A
0 years, male, asian, stage:Stage I, alive, 1231 days
12.3
TCGA-BC-A8YO-01A
0 years, female, white, stage:Stage IIIC, alive, 562 days
12.3
TCGA-ZP-A9D4-01A
0 years, female, white, stage:'--, alive, 395 days
12.3
TCGA-ZS-A9CE-01A
0 years, female, white, stage:Stage II, alive, 1241 days
12.2
TCGA-DD-A1EE-01A
0 years, male, white, stage:Stage IIIA, dead, 349 days
12.1
TCGA-BC-A10U-01A
0 years, male, white, stage:'--, dead, 837 days
12.1
TCGA-2Y-A9GS-01A
0 years, male, white, stage:'--, dead, 724 days
12.1
TCGA-CC-A7IL-01A
0 years, male, asian, stage:Stage IIIA, dead, 278 days
12.0
TCGA-DD-AAW3-01A
0 years, male, asian, stage:Stage I, alive, 1633 days
12.0
TCGA-DD-A3A6-01A
0 years, female, white, stage:Stage II, dead, 3258 days
12.0
TCGA-CC-A8HV-01A
0 years, female, asian, stage:Stage II, dead, 279 days
11.9
TCGA-DD-AAE2-01A
0 years, male, asian, stage:Stage I, alive, 638 days
11.9
TCGA-2Y-A9H4-01A
0 years, male, black or african american, stage:Stage I, alive, 1452 days
11.8
TCGA-DD-AAEE-01A
0 years, male, asian, stage:Stage I, alive, 810 days
11.8
TCGA-ED-A66Y-01A
0 years, female, asian, stage:Stage IIIA, dead, 296 days
11.8
TCGA-DD-AADP-01A
0 years, male, asian, stage:Stage I, alive, 458 days
11.8
TCGA-2Y-A9HA-01A
0 years, male, white, stage:Stage II, dead, 36 days
11.8
TCGA-CC-A9FS-01A
0 years, male, asian, stage:Stage II, alive, 211 days
11.6
TCGA-CC-A1HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 101 days
11.6
TCGA-DD-A73F-01A
0 years, female, white, stage:Stage I, alive, 1085 days
11.6
TCGA-UB-A7MD-01A
0 years, male, black or african american, stage:Stage I, dead, 52 days
11.5
TCGA-XR-A8TF-01A
0 years, male, white, stage:Stage I, dead, 693 days
11.5
TCGA-2Y-A9H6-01A
0 years, female, white, stage:Stage I, alive, 357 days
11.5
TCGA-ED-A7PZ-01A
0 years, male, asian, stage:Stage II, alive, 6 days
11.4
TCGA-ZP-A9CZ-01A
0 years, male, asian, stage:'--, alive, 706 days
11.4
TCGA-DD-A39W-01A
0 years, female, white, stage:Stage III, dead, 827 days
11.4
TCGA-BC-A3KF-01A
0 years, female, white, stage:Stage I, alive, 8 days
11.3
TCGA-BC-A69I-01A
0 years, male, white, stage:Stage I, alive, 387 days
11.3
TCGA-K7-AAU7-01A
0 years, male, white, stage:Stage II, alive, 359 days
11.2
TCGA-CC-A7IJ-01A
0 years, male, asian, stage:Stage II, alive, 382 days
11.2
TCGA-DD-A4NJ-01A
0 years, female, white, stage:Stage II, alive, 928 days
11.1
TCGA-YA-A8S7-01A
0 years, male, white, stage:Stage IIIA, dead, 412 days
11.1
TCGA-MI-A75E-01A
0 years, male, white, stage:Stage IIIC, alive, 507 days
11.1
TCGA-ZP-A9D0-01A
0 years, female, black or african american, stage:'--, alive, 1091 days
11.1
TCGA-CC-5260-01A
0 years, female, asian, stage:Stage IIIC, dead, 87 days
11.0
TCGA-DD-AAE9-01A
0 years, male, asian, stage:Stage I, alive, 722 days
11.0
TCGA-DD-A4NF-01A
0 years, male, white, stage:Stage I, alive, 942 days
11.0
TCGA-RC-A7SB-01A
0 years, male, asian, stage:Stage II, alive, 588 days
11.0
TCGA-5R-AA1C-01A
0 years, male, white, stage:Stage II, alive, 520 days
10.9
TCGA-DD-AAVQ-01A
0 years, male, asian, stage:Stage I, alive, 2728 days
10.9
TCGA-DD-A4NR-01A
0 years, female, white, stage:Stage I, dead, 9 days
10.9
TCGA-LG-A6GG-01A
0 years, female, white, stage:Stage II, alive, 387 days
10.8
TCGA-DD-AACX-01A
0 years, male, asian, stage:Stage II, alive, 170 days
10.8
TCGA-DD-AACL-01A
0 years, female, asian, stage:Stage I, dead, 107 days
10.8
TCGA-DD-A73C-01A
0 years, female, white, stage:Stage IIIA, alive, 701 days
10.8
TCGA-DD-AADB-01A
0 years, male, asian, stage:Stage I, alive, 1242 days
10.7
TCGA-DD-A11D-01A
0 years, female, white, stage:Stage I, dead, 1560 days
10.7
TCGA-HP-A5N0-01A
0 years, female, stage:'--, dead, 752 days
10.7
TCGA-FV-A495-01A
0 years, female, white, stage:Stage II, alive, 1 days
10.7
TCGA-DD-A1EL-01A
0 years, male, black or african american, stage:Stage II, dead, 415 days
10.7
TCGA-EP-A26S-01A
0 years, male, white, stage:Stage I, alive, 608 days
10.6
TCGA-ED-A82E-01A
0 years, female, asian, stage:Stage IIIA, alive, 408 days
10.5
TCGA-2Y-A9H5-01A
0 years, female, white, stage:Stage I, dead, 555 days
10.5
TCGA-CC-5263-01A
0 years, male, asian, stage:Stage IIIA, dead, 129 days
10.5
TCGA-DD-A11C-01A
0 years, male, white, stage:Stage I, alive, 662 days
10.5
TCGA-DD-AAW2-01A
0 years, male, asian, stage:Stage I, alive, 1855 days
10.5
TCGA-DD-A1EB-01A
0 years, female, stage:Stage I, alive, 2017 days
10.5
TCGA-DD-AAEG-01A
0 years, female, asian, stage:Stage I, alive, 719 days
10.4
TCGA-DD-A39Y-01A
0 years, male, asian, stage:Stage I, dead, 171 days
10.4
TCGA-2Y-A9H2-01A
0 years, female, white, stage:Stage I, alive, 1731 days
10.4
TCGA-DD-AAEH-01A
0 years, male, asian, stage:Stage I, alive, 784 days
10.3
TCGA-ZP-A9CV-01A
0 years, male, white, stage:'--, dead, 1088 days
10.3
TCGA-CC-A3MB-01A
0 years, male, asian, stage:Stage IIIA, dead, 315 days
10.2
TCGA-ZP-A9CY-01A
0 years, female, white, stage:'--, alive, 782 days
10.2
TCGA-DD-A118-01A
0 years, female, white, stage:Stage II, alive, 3437 days
10.2
TCGA-DD-AAD1-01A
0 years, female, asian, stage:Stage I, alive, 564 days
10.1
TCGA-FV-A496-01A
0 years, female, white, stage:Stage I, alive, 10 days
10.0
TCGA-ED-A4XI-01A
0 years, male, asian, stage:Stage II, alive, 819 days
9.9
TCGA-CC-5258-01A
0 years, male, asian, stage:Stage II, dead, 129 days
9.9
TCGA-RC-A7SH-01A
0 years, male, asian, stage:Stage II, alive, 468 days
9.8
TCGA-K7-A5RF-01A
0 years, male, white, stage:Stage I, alive, 631 days
9.8
TCGA-DD-AAW1-01A
0 years, male, asian, stage:Stage IIIA, alive, 1989 days
9.8
TCGA-CC-A5UD-01A
0 years, male, asian, stage:Stage IIIA, dead, 304 days
9.7
TCGA-5C-A9VG-01A
0 years, male, white, stage:Stage II, alive, 328 days
9.7
TCGA-DD-AACW-01A
0 years, male, asian, stage:Stage I, alive, 1424 days
9.6
TCGA-XR-A8TE-01A
0 years, male, white, stage:Stage IIIA, alive, 925 days
9.6
TCGA-ED-A8O5-01A
0 years, female, asian, stage:Stage IIIA, alive, 406 days
9.6
TCGA-G3-AAV7-01A
0 years, male, asian, stage:Stage II, alive, 361 days
9.6
TCGA-DD-AAVS-01A
0 years, male, asian, stage:Stage I, alive, 1823 days
9.6
TCGA-DD-AAE1-01A
0 years, male, asian, stage:Stage I, alive, 552 days
9.6
TCGA-ED-A7PY-01A
0 years, female, asian, stage:Stage II, alive, 390 days
9.6
TCGA-DD-AADA-01A
0 years, female, asian, stage:Stage I, alive, 1233 days
9.6
TCGA-RC-A7S9-01A
0 years, female, asian, stage:Stage I, alive, 640 days
9.5
TCGA-BC-A5W4-01A
0 years, male, white, stage:Stage IIIA, dead, 547 days
9.5
TCGA-DD-AADF-01A
0 years, female, asian, stage:Stage I, dead, 115 days
9.5
TCGA-G3-AAUZ-01A
0 years, male, stage:Stage I, alive, 480 days
9.5
TCGA-DD-AACN-01A
0 years, male, asian, stage:Stage I, alive, 1302 days
9.5
TCGA-RC-A6M4-01A
0 years, female, white, stage:Stage IIIA, alive, 22 days
9.5
TCGA-UB-A7MF-01A
0 years, male, white, stage:Stage IIIA, dead, 214 days
9.5
TCGA-FV-A23B-01A
0 years, female, white, stage:Stage II, dead, 1852 days
9.3
TCGA-DD-AADY-01A
0 years, female, asian, stage:Stage I, alive, 555 days
9.3
TCGA-KR-A7K0-01A
0 years, male, white, stage:Stage I, dead, 65 days
9.3
TCGA-G3-A3CG-01A
0 years, male, white, stage:Stage I, alive, 673 days
9.3
TCGA-5C-A9VH-01A
0 years, male, white, stage:Stage I, alive, 322 days
9.2
TCGA-DD-AACY-01A
0 years, male, asian, stage:Stage I, alive, 1450 days
9.2
TCGA-DD-A1EH-01A
0 years, male, white, stage:Stage III, alive, 1495 days
9.2
TCGA-DD-AACJ-01A
0 years, male, asian, stage:Stage II, alive, 2102 days
9.2
TCGA-BC-A10W-01A
0 years, male, asian, stage:'--, dead, 91 days
9.1
TCGA-DD-AAE6-01A
0 years, female, asian, stage:Stage I, alive, 141 days
9.1
TCGA-G3-A3CK-01A
0 years, male, asian, stage:Stage I, alive, 585 days
9.0
TCGA-BD-A3EP-01A
0 years, female, black or african american, stage:Stage I, alive, 409 days
9.0
TCGA-DD-A4NO-01A
0 years, male, white, stage:Stage I, alive, 2245 days
9.0
TCGA-DD-A4NP-01A
0 years, male, white, stage:Stage I, alive, 3308 days
9.0
TCGA-DD-AAEI-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
9.0
TCGA-CC-5262-01A
0 years, male, asian, stage:Stage IIIC, dead, 103 days
9.0
TCGA-BW-A5NO-01A
0 years, male, black or african american, stage:Stage IIIA, alive, 20 days
8.9
TCGA-DD-A1EF-01A
0 years, female, white, stage:Stage I, dead, 394 days
8.9
TCGA-G3-AAV6-01A
0 years, female, white, stage:Stage IIIA, dead, 65 days
8.8
TCGA-DD-AAVU-01A
0 years, male, asian, stage:Stage II, alive, 2202 days
8.8
TCGA-ED-A5KG-01A
0 years, female, asian, stage:Stage II, alive, 854 days
8.8
TCGA-ED-A8O6-01A
0 years, female, asian, stage:Stage IIIA, dead, 56 days
8.8
TCGA-2Y-A9GV-01A
0 years, female, white, stage:Stage I, dead, 2532 days
8.8
TCGA-G3-A7M7-01A
0 years, male, white, stage:Stage I, alive, 361 days
8.7
TCGA-G3-A7M8-01A
0 years, male, asian, stage:Stage I, alive, 430 days
8.7
TCGA-G3-A3CH-01A
0 years, male, asian, stage:Stage IIIA, alive, 780 days
8.7
TCGA-ZS-A9CG-01A
0 years, male, white, stage:Stage II, alive, 341 days
8.7
TCGA-DD-AA3A-01A
0 years, female, white, stage:Stage I, dead, 410 days
8.7
TCGA-DD-A3A4-01A
0 years, male, white, stage:Stage IIIA, dead, 612 days
8.6
TCGA-CC-A7IK-01A
0 years, male, asian, stage:Stage IIIA, dead, 262 days
8.6
TCGA-DD-A73B-01A
0 years, female, white, stage:Stage I, dead, 283 days
8.5
TCGA-DD-AADC-01A
0 years, male, asian, stage:Stage I, dead, 425 days
8.5
TCGA-DD-A1EK-01A
0 years, female, white, stage:Stage IVB, dead, 558 days
8.5
TCGA-DD-AACE-01A
0 years, male, asian, stage:Stage I, alive, 2184 days
8.5
TCGA-LG-A9QD-01A
0 years, male, white, stage:Stage IIIA, alive, 366 days
8.5
TCGA-ED-A66X-01A
0 years, male, asian, stage:Stage IIIA, alive, 406 days
8.5
TCGA-DD-AAVV-01A
0 years, male, asian, stage:Stage II, alive, 2455 days
8.4
TCGA-DD-AACK-01A
0 years, male, asian, stage:Stage I, alive, 9 days
8.4
TCGA-DD-AACP-01A
0 years, male, asian, stage:Stage I, alive, 415 days
8.4
TCGA-DD-AAD3-01A
0 years, male, asian, stage:Stage I, alive, 1295 days
8.4
TCGA-BD-A2L6-01A
0 years, male, white, stage:'--, alive, 1363 days
8.3
TCGA-DD-AAW0-01A
0 years, male, asian, stage:Stage I, alive, 2015 days
8.3
TCGA-2Y-A9GY-01A
0 years, female, white, stage:Stage II, dead, 757 days
8.3
TCGA-KR-A7K8-01A
0 years, male, stage:Stage I, alive, 906 days
8.3
TCGA-G3-A25Y-01A
0 years, female, asian, stage:Stage I, dead, 452 days
8.3
TCGA-2Y-A9H9-01A
0 years, male, white, stage:Stage I, alive, 697 days
8.2
TCGA-DD-A113-01A
0 years, female, white, stage:Stage II, alive, 2425 days
8.2
TCGA-FV-A2QR-01A
0 years, male, white, stage:Stage I, dead, 581 days
8.2
TCGA-G3-A5SL-01A
0 years, male, white, stage:Stage II, alive, 621 days
8.2
TCGA-WX-AA44-01A
0 years, female, white, stage:Stage I, alive, 615 days
8.1
TCGA-2Y-A9GT-01A
0 years, male, white, stage:Stage I, dead, 1624 days
8.1
TCGA-CC-A7IF-01A
0 years, male, asian, stage:Stage IIIA, dead, 649 days
8.1
TCGA-UB-AA0U-01A
0 years, male, white, stage:Stage II, alive, 327 days
8.1
TCGA-ED-A97K-01A
0 years, male, asian, stage:Stage IIIA, alive, 6 days
8.1
TCGA-G3-A5SI-01A
0 years, male, asian, stage:Stage II, dead, 768 days
8.0
TCGA-BC-A10R-01A
0 years, female, white, stage:'--, dead, 308 days
8.0
TCGA-DD-AACB-01A
0 years, female, asian, stage:Stage I, alive, 2324 days
8.0
TCGA-T1-A6J8-01A
0 years, male, white, stage:'--, alive, 23 days
8.0
TCGA-RC-A7SF-01A
0 years, male, asian, stage:Stage I, alive, 579 days
8.0
TCGA-BC-A216-01A
0 years, female, white, stage:Stage IIIA, alive, 1351 days
7.9
TCGA-ED-A627-01A
0 years, male, white, stage:Stage I, alive, 423 days
7.9
TCGA-G3-AAV5-01A
0 years, male, white, stage:Stage II, alive, 354 days
7.8
TCGA-EP-A2KC-01A
0 years, male, black or african american, stage:Stage I, dead, 19 days
7.8
TCGA-DD-A4NQ-01A
0 years, male, white, stage:Stage II, dead, 373 days
7.8
TCGA-DD-AACF-01A
0 years, male, asian, stage:Stage I, dead, 365 days
7.8
TCGA-ZS-A9CD-01A
0 years, male, white, stage:Stage II, dead, 1386 days
7.7
TCGA-DD-A1EJ-01A
0 years, female, white, stage:Stage IIIC, dead, 1005 days
7.7
TCGA-G3-A25U-01A
0 years, female, asian, stage:Stage I, alive, 1636 days
7.7
TCGA-DD-A3A3-01A
0 years, male, asian, stage:Stage I, dead, 535 days
7.6
TCGA-BC-A69H-01A
0 years, male, white, stage:Stage II, alive, 444 days
7.5
TCGA-CC-A3MC-01A
0 years, male, asian, stage:Stage IIIA, alive, 363 days
7.5
TCGA-DD-AADK-01A
0 years, female, asian, stage:Stage II, alive, 1049 days
7.5
TCGA-UB-AA0V-01A
0 years, female, white, stage:Stage I, alive, 314 days
7.5
TCGA-DD-A3A9-01A
0 years, female, white, stage:Stage IVB, dead, 931 days
7.5
TCGA-DD-AACZ-01A
0 years, female, asian, stage:Stage I, dead, 171 days
7.5
TCGA-DD-A1EI-01A
0 years, male, asian, stage:Stage I, alive, 183 days
7.5
TCGA-UB-A7ME-01A
0 years, male, asian, stage:Stage I, alive, 486 days
7.4
TCGA-MR-A520-01A
0 years, male, white, stage:Stage I, alive, 229 days
7.4
TCGA-K7-A5RG-01A
0 years, male, black or african american, stage:Stage I, alive, 519 days
7.4
TCGA-DD-A73D-01A
0 years, female, white, stage:Stage II, alive, 693 days
7.4
TCGA-BC-A10T-01A
0 years, male, white, stage:'--, dead, 837 days
7.3
TCGA-O8-A75V-01A
0 years, male, stage:Stage I, alive, 538 days
7.3
TCGA-WX-AA47-01A
0 years, female, white, stage:Stage IIIA, dead, 556 days
7.3
TCGA-PD-A5DF-01A
0 years, female, white, stage:Stage IIIB, dead, 639 days
7.3
TCGA-DD-AAE3-01A
0 years, male, asian, stage:Stage I, alive, 566 days
7.3
TCGA-DD-AADM-01A
0 years, male, asian, stage:Stage II, dead, 12 days
7.3
TCGA-G3-A25S-01A
0 years, male, white, stage:Stage I, dead, 416 days
7.3
TCGA-GJ-A3OU-01A
0 years, male, white, stage:Stage I, alive, 879 days
7.2
TCGA-DD-A119-01A
0 years, male, asian, stage:Stage IV, dead, 223 days
7.2
TCGA-CC-A3MA-01A
0 years, male, asian, stage:Stage IIIA, dead, 303 days
7.2
TCGA-EP-A2KB-01A
0 years, female, white, stage:Stage I, dead, 596 days
7.1
TCGA-CC-A8HU-01A
0 years, female, asian, stage:Stage IIIA, dead, 344 days
7.1
TCGA-XR-A8TD-01A
0 years, female, white, stage:Stage IIIB, alive, 1030 days
7.1
TCGA-2Y-A9GX-01A
0 years, male, white, stage:Stage I, alive, 2442 days
7.1
TCGA-ED-A7XP-01A
0 years, female, asian, stage:Stage II, alive, 400 days
7.1
TCGA-DD-AAVW-01A
0 years, male, asian, stage:Stage I, alive, 2317 days
7.1
TCGA-WX-AA46-01A
0 years, male, white, stage:Stage II, alive, 756 days
7.1
TCGA-DD-AAEA-01A
0 years, male, asian, stage:Stage I, alive, 575 days
7.0
TCGA-2Y-A9GU-01A
0 years, female, white, stage:Stage I, alive, 1939 days
7.0
TCGA-DD-A73A-01A
0 years, male, white, stage:Stage I, alive, 728 days
7.0
TCGA-DD-AACV-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
6.9
TCGA-DD-A1EC-01A
0 years, female, white, stage:Stage I, alive, 602 days
6.9
TCGA-G3-A5SM-01A
0 years, male, white, stage:Stage II, alive, 520 days
6.8
TCGA-DD-A73G-01A
0 years, female, white, stage:Stage I, alive, 3478 days
6.8
TCGA-DD-AADJ-01A
0 years, female, asian, stage:Stage I, alive, 1066 days
6.8
TCGA-XR-A8TC-01A
0 years, female, white, stage:Stage I, alive, 1339 days
6.8
TCGA-ED-A459-01A
0 years, male, asian, stage:Stage II, alive, 910 days
6.8
TCGA-RC-A6M6-01A
0 years, male, white, stage:Stage II, alive, 9 days
6.7
TCGA-G3-A3CI-01A
0 years, male, white, stage:Stage I, alive, 180 days
6.7
TCGA-DD-A1ED-01A
0 years, male, white, stage:Stage I, alive, 2301 days
6.7
TCGA-G3-AAV1-01A
0 years, male, asian, stage:Stage IIIC, dead, 359 days
6.7
TCGA-DD-A4NA-01A
0 years, female, white, stage:Stage IIIC, alive, 1008 days
6.7
TCGA-DD-AAVZ-01A
0 years, male, asian, stage:Stage I, alive, 1900 days
6.7
TCGA-KR-A7K7-01A
0 years, female, white, stage:Stage II, alive, 951 days
6.6
TCGA-BC-A10X-01A
0 years, female, white, stage:Stage IIIA, dead, 770 days
6.6
TCGA-CC-A7IE-01A
0 years, male, asian, stage:Stage IIIA, dead, 217 days
6.6
TCGA-DD-A39Z-01A
0 years, female, stage:Stage II, dead, 601 days
6.6
TCGA-UB-A7MC-01A
0 years, male, white, stage:Stage IIIA, alive, 500 days
6.6
TCGA-WJ-A86L-01A
0 years, female, white, stage:Stage I, alive, 345 days
6.6
TCGA-G3-A25X-01A
0 years, male, asian, stage:Stage II, alive, 1779 days
6.5
TCGA-DD-AADI-01A
0 years, female, asian, stage:Stage I, alive, 1085 days
6.5
TCGA-DD-A3A2-01A
0 years, female, white, stage:Stage I, dead, 2131 days
6.5
TCGA-DD-AAD2-01A
0 years, male, asian, stage:Stage I, alive, 658 days
6.5
TCGA-CC-5264-01A
0 years, male, asian, stage:Stage IIIA, dead, 102 days
6.5
TCGA-DD-A4NL-01A
0 years, male, white, stage:Stage I, alive, 1711 days
6.5
TCGA-DD-A4ND-01A
0 years, female, white, stage:Stage I, alive, 2746 days
6.4
TCGA-CC-A7IH-01A
0 years, male, asian, stage:Stage IIIA, alive, 365 days
6.4
TCGA-K7-A6G5-01A
0 years, male, white, stage:Stage I, alive, 512 days
6.4
TCGA-BC-A112-01A
0 years, male, white, stage:'--, dead, 153 days
6.4
TCGA-G3-A25V-01A
0 years, male, white, stage:Stage I, alive, 860 days
6.4
TCGA-DD-A1EG-01A
0 years, male, white, stage:Stage I, dead, 1372 days
6.4
TCGA-NI-A8LF-01A
0 years, male, white, stage:Stage I, alive, 799 days
6.3
TCGA-FV-A3R3-01A
0 years, female, white, stage:Stage I, dead, 366 days
6.3
TCGA-DD-A4NN-01A
0 years, female, white, stage:Stage I, dead, 899 days
6.2
TCGA-DD-AAVX-01A
0 years, male, asian, stage:Stage II, alive, 1718 days
6.2
TCGA-FV-A3I0-01A
0 years, female, white, stage:Stage II, alive, 848 days
6.2
TCGA-DD-AAE7-01A
0 years, male, asian, stage:Stage I, alive, 644 days
6.2
TCGA-G3-A25T-01A
0 years, female, white, stage:Stage IIIA, alive, 1553 days
6.2
TCGA-KR-A7K2-01A
0 years, male, white, stage:Stage I, alive, 829 days
6.1
TCGA-5R-AAAM-01A
0 years, female, white, stage:Stage II, dead, 46 days
6.1
TCGA-BC-A10S-01A
0 years, male, white, stage:'--, dead, 1423 days
6.1
TCGA-ZP-A9D1-01A
0 years, female, white, stage:'--, alive, 21 days
6.1
TCGA-DD-A3A1-01A
0 years, male, stage:Stage IIIA, dead, 233 days
6.1
TCGA-DD-A4NG-01A
0 years, male, white, stage:Stage IIIA, dead, 802 days
6.0
TCGA-DD-AADU-01A
0 years, male, asian, stage:Stage II, alive, 554 days
5.9
TCGA-CC-A5UC-01A
0 years, male, asian, stage:Stage IIIA, dead, 347 days
5.9
TCGA-DD-AACT-01A
0 years, female, asian, stage:Stage I, alive, 1562 days
5.9
TCGA-DD-A39X-01A
0 years, female, white, stage:Stage I, dead, 1694 days
5.9
TCGA-ES-A2HT-01A
0 years, male, black or african american, stage:Stage I, dead, 438 days
5.8
TCGA-DD-AAD5-01A
0 years, male, asian, stage:Stage I, alive, 1345 days
5.8
TCGA-DD-AADQ-01A
0 years, male, asian, stage:Stage II, alive, 436 days
5.8
TCGA-BC-A110-01A
0 years, female, black or african american, stage:'--, dead, 2116 days
5.8
TCGA-DD-AADR-01A
0 years, male, asian, stage:Stage I, alive, 2028 days
5.8
TCGA-DD-AAEK-01A
0 years, male, asian, stage:Stage II, alive, 1067 days
5.7
TCGA-RG-A7D4-01A
0 years, male, black or african american, stage:Stage II, alive, 1098 days
5.7
TCGA-DD-A11B-01A
0 years, male, white, stage:Stage I, dead, 14 days
5.7
TCGA-HP-A5MZ-01A
0 years, male, stage:Stage I, dead, 91 days
5.6
TCGA-2Y-A9GW-01A
0 years, male, white, stage:Stage I, dead, 1271 days
5.6
TCGA-DD-A4NB-01A
0 years, male, white, stage:Stage I, alive, 989 days
5.6
TCGA-2Y-A9H3-01A
0 years, male, white, stage:Stage II, alive, 1516 days
5.6
TCGA-NI-A4U2-01A
0 years, male, white, stage:Stage IIIA, dead, 1791 days
5.4
TCGA-MI-A75C-01A
0 years, male, white, stage:Stage I, alive, 291 days
5.4
TCGA-5C-AAPD-01A
0 years, male, asian, stage:Stage II, alive, 20 days
5.4
TCGA-G3-A3CJ-01A
0 years, male, american indian or alaska native, stage:Stage II, alive, 594 days
5.4
TCGA-DD-AAVR-01A
0 years, male, asian, stage:Stage I, alive, 2513 days
5.4
TCGA-DD-A3A7-01A
0 years, male, stage:Stage IIIB, dead, 419 days
5.3
TCGA-DD-AAED-01A
0 years, male, asian, stage:Stage I, alive, 763 days
5.3
TCGA-DD-A4NI-01A
0 years, male, white, stage:Stage II, alive, 816 days
5.2
TCGA-BD-A3ER-01A
0 years, male, white, stage:Stage II, alive, 1115 days
5.2
TCGA-DD-AAD8-01A
0 years, female, asian, stage:Stage I, alive, 1219 days
5.2
TCGA-FV-A2QQ-01A
0 years, male, white, stage:Stage I, alive, 729 days
5.1
TCGA-DD-AAC9-01A
0 years, male, asian, stage:Stage I, alive, 347 days
5.0
TCGA-EP-A3JL-01A
0 years, male, white, stage:Stage I, alive, 303 days
5.0
TCGA-BC-A10Q-01A
0 years, female, white, stage:'--, dead, 1135 days
4.9
TCGA-MR-A8JO-01A
0 years, male, white, stage:Stage I, alive, 330 days
4.8
TCGA-DD-AACC-01A
0 years, male, asian, stage:Stage I, dead, 1685 days
4.7
TCGA-ES-A2HS-01A
0 years, male, white, stage:Stage I, dead, 688 days
4.6
TCGA-2Y-A9H1-01A
0 years, male, white, stage:Stage I, dead, 1229 days
4.6
TCGA-EP-A2KA-01A
0 years, female, white, stage:Stage IIIA, dead, 627 days
4.5
TCGA-DD-AADN-01A
0 years, male, asian, stage:Stage I, alive, 898 days
4.5
TCGA-RC-A6M5-01A
0 years, female, white, stage:Stage IVA, alive, 15 days
4.4
TCGA-DD-A39V-01A
0 years, male, white, stage:Stage II, dead, 643 days
4.3
TCGA-5R-AA1D-01A
0 years, female, white, stage:Stage IIIA, alive, 449 days
4.2
TCGA-CC-5259-01A
0 years, female, asian, stage:Stage IIIC, alive, 250 days
4.2
TCGA-WQ-AB4B-01A
0 years, male, white, stage:Stage II, alive, 395 days
3.9
TCGA-G3-A5SJ-01A
0 years, male, white, stage:Stage I, alive, 698 days
3.8
TCGA-DD-AACD-01A
0 years, male, asian, stage:Stage I, dead, 381 days
3.7
TCGA-DD-AACI-01A
0 years, male, asian, stage:Stage II, alive, 1618 days
3.5
TCGA-G3-A5SK-01A
0 years, male, white, stage:Stage I, alive, 744 days
3.4
TCGA-DD-AAE4-01A
0 years, female, asian, stage:Stage I, alive, 608 days
3.3
TCGA-DD-AAD6-01A
0 years, male, asian, stage:Stage IIIA, alive, 672 days
3.1
TCGA-DD-AACG-01A
0 years, male, asian, stage:Stage II, dead, 469 days
2.8
TCGA-DD-AAEB-01A
0 years, male, asian, stage:Stage I, alive, 478 days
2.8
TCGA-DD-AADO-01A
0 years, male, asian, stage:Stage I, alive, 453 days
2.8
TCGA-G3-A25Z-01A
0 years, male, asian, stage:Stage I, alive, 655 days
2.7
TCGA-FV-A4ZP-01A
0 years, male, white, stage:Stage IIIA, dead, 2486 days
2.4
TCGA-DD-AADS-01A
0 years, male, asian, stage:Stage I, alive, 474 days
2.2
TCGA-DD-AACO-01A
0 years, male, asian, stage:Stage I, alive, 1876 days
1.3
TCGA-CC-A123-01A
0 years, female, asian, stage:Stage IIIA, alive, 219 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
TAF6L is not prognostic in Liver Hepatocellular Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
8.6
Number of samples
231
Samples
Sample
Description
TPM
DO45149
0 years, female, NA, stage:2, alive, 1260 days
29.0
DO23532
0 years, female, NA, stage:1, alive, 960 days
28.4
DO45125
0 years, male, NA, stage:3, alive, 1680 days
19.0
DO45105
0 years, male, NA, stage:1, alive, 1680 days
18.4
DO45101
0 years, male, NA, stage:2, alive, 1680 days
17.0
DO50839
0 years, female, NA, stage:3, alive, 330 days
15.6
DO23534
0 years, male, NA, stage:2, alive, 840 days
15.5
DO50814
0 years, male, NA, stage:3, alive, 420 days
15.5
DO50845
0 years, male, NA, stage:3, alive, 210 days
15.4
DO50816
0 years, male, NA, stage:2, alive, 390 days
15.3
DO48677
0 years, male, NA, stage:3, alive, 1140 days
15.3
DO23508
0 years, female, NA, stage:2, alive, 390 days
14.7
DO50817
0 years, male, NA, stage:2, alive, 390 days
14.1
DO45273
0 years, male, NA, stage:2, alive, 480 days
13.8
DO48719
0 years, male, NA, stage:2, alive, 690 days
13.7
DO45217
0 years, female, NA, stage:3, dead, 270 days
13.6
DO45107
0 years, female, NA, stage:2, alive, 1710 days
13.5
DO23529
0 years, male, NA, stage:4, alive, 930 days
13.4
DO45179
0 years, female, NA, stage:2, alive, 600 days
13.3
DO50815
0 years, male, NA, stage:3, alive, 150 days
13.2
DO45161
0 years, male, NA, stage:2, dead, 540 days
13.2
DO45241
0 years, male, NA, stage:1, alive, 1080 days
13.2
DO48737
0 years, male, NA, stage:1, alive, 720 days
12.7
DO50804
0 years, male, NA, stage:2, alive, 720 days
12.7
DO23512
0 years, male, NA, stage:1, alive, 1260 days
12.6
DO50802
0 years, male, NA, stage:2, alive, 930 days
12.3
DO45097
0 years, male, NA, stage:3, alive, 1620 days
12.2
DO45227
0 years, female, NA, stage:2, alive, 1020 days
12.2
DO23526
0 years, male, NA, stage:3, alive, 1050 days
12.2
DO45281
0 years, male, NA, stage:4, alive, 750 days
12.1
DO45277
0 years, male, NA, stage:3, alive, 600 days
11.9
DO23540
0 years, male, NA, stage:1, alive, 750 days
11.8
DO45275
0 years, male, NA, stage:3, dead, 10 days
11.6
DO23516
0 years, male, NA, stage:3, dead, 20 days
11.6
DO50811
0 years, male, NA, stage:1, alive, 450 days
11.5
DO45092
0 years, male, NA, stage:4, dead, 1200 days
11.5
DO50840
0 years, male, NA, stage:2, alive, 330 days
11.5
DO23536
0 years, male, NA, stage:2, alive, 930 days
11.3
DO50791
0 years, female, NA, stage:1, dead, 480 days
11.3
DO50818
0 years, male, NA, stage:2, alive, 510 days
11.2
DO23513
0 years, male, NA, stage:3, alive, 1200 days
11.1
DO48732
0 years, male, NA, stage:3, alive, 630 days
11.0
DO23533
0 years, male, NA, stage:2, alive, 900 days
10.9
DO48681
0 years, male, NA, stage:2, alive, 900 days
10.9
DO23514
0 years, male, NA, stage:2, alive, 1290 days
10.8
DO45185
0 years, male, NA, stage:2, alive, 600 days
10.8
DO50783
0 years, male, NA, stage:3, alive, 480 days
10.7
DO48672
0 years, male, NA, stage:2, alive, 450 days
10.6
DO45259
0 years, male, NA, stage:3, alive, 330 days
10.6
DO45243
0 years, female, NA, stage:3, alive, 930 days
10.6
DO45249
0 years, male, NA, stage:1, alive, 630 days
10.6
DO45131
0 years, male, NA, stage:4, dead, 360 days
10.6
DO45255
0 years, male, NA, stage:3, alive, 720 days
10.5
DO23528
0 years, female, NA, stage:2, alive, 1020 days
10.5
DO48757
0 years, female, NA, stage:3, alive, 480 days
10.4
DO45215
0 years, male, NA, stage:2, alive, 1170 days
10.4
DO48715
0 years, female, NA, stage:2, dead, 690 days
10.3
DO50799
0 years, female, NA, stage:2, alive, 540 days
10.2
DO45209
0 years, male, NA, stage:4, alive, 1350 days
10.2
DO45237
0 years, male, NA, stage:2, alive, 900 days
10.2
DO23539
0 years, male, NA, stage:1, alive, 1110 days
10.1
DO50825
0 years, male, NA, stage:2, alive, 390 days
10.0
DO45173
0 years, male, NA, stage:3, alive, 1170 days
9.9
DO45133
0 years, male, NA, stage:3, dead, 660 days
9.9
DO23548
0 years, female, NA, stage:1, alive, 840 days
9.9
DO23547
0 years, male, NA, stage:1, alive, 1020 days
9.8
DO45113
0 years, male, NA, stage:3, alive, 1560 days
9.8
DO45265
0 years, male, NA, stage:3, alive, 1020 days
9.7
DO50806
0 years, male, NA, stage:4, alive, 540 days
9.7
DO23549
0 years, male, NA, stage:3, alive, 990 days
9.7
DO45139
0 years, male, NA, stage:3, alive, 1320 days
9.6
DO23537
0 years, male, NA, stage:2, dead, 900 days
9.6
DO45267
0 years, male, NA, stage:3, dead, 570 days
9.5
DO48706
0 years, male, NA, stage:2, alive, 870 days
9.5
DO48730
0 years, female, NA, stage:2, alive, 630 days
9.4
DO45205
0 years, female, NA, stage:2, dead, 90 days
9.4
DO23515
0 years, male, NA, stage:2, alive, 1230 days
9.4
DO45219
0 years, male, NA, stage:2, alive, 1080 days
9.3
DO50832
0 years, male, NA, stage:3, alive, 90 days
9.3
DO50793
0 years, male, NA, stage:4, alive, 540 days
9.3
DO50844
0 years, male, NA, stage:4, alive, 300 days
9.1
DO48695
0 years, male, NA, stage:2, alive, 720 days
9.1
DO45117
0 years, female, NA, stage:2, dead, 1110 days
9.1
DO50855
0 years, male, NA, stage:2, alive, 570 days
9.0
DO45187
0 years, female, NA, stage:1, alive, 1260 days
9.0
DO50819
0 years, female, NA, stage:2, alive, 510 days
9.0
DO45145
0 years, male, NA, stage:3, dead, 60 days
9.0
DO50776
0 years, male, NA, stage:1, alive, 690 days
8.9
DO45099
0 years, male, NA, stage:3, alive, 1590 days
8.8
DO45096
0 years, male, NA, stage:2, dead, 1290 days
8.7
DO45121
0 years, male, NA, stage:3, alive, 1530 days
8.7
DO45175
0 years, male, NA, stage:2, alive, 1140 days
8.7
DO48697
0 years, female, NA, stage:2, dead, 810 days
8.7
DO45094
0 years, male, NA, stage:3, alive, 1650 days
8.7
DO50807
0 years, male, NA, stage:1, alive, 540 days
8.6
DO45127
0 years, male, NA, stage:3, dead, 420 days
8.5
DO45171
0 years, male, NA, stage:3, alive, 600 days
8.5
DO48751
0 years, male, NA, stage:2, dead, 480 days
8.5
DO50813
0 years, male, NA, stage:2, alive, 420 days
8.5
DO23546
0 years, male, NA, stage:2, alive, 1050 days
8.4
DO45189
0 years, female, NA, stage:2, alive, 1200 days
8.4
DO48701
0 years, male, NA, stage:2, alive, 780 days
8.4
DO23524
0 years, female, NA, stage:2, alive, 1050 days
8.4
DO48759
0 years, male, NA, stage:3, alive, 720 days
8.4
DO23527
0 years, male, NA, stage:1, alive, 1050 days
8.3
DO48736
0 years, female, NA, stage:1, alive, 600 days
8.3
DO45129
0 years, male, NA, stage:3, alive, 1470 days
8.3
DO45183
0 years, female, NA, stage:2, dead, 570 days
8.3
DO45207
0 years, male, NA, stage:1, alive, 1050 days
8.3
DO45141
0 years, male, NA, stage:2, alive, 1320 days
8.3
DO45115
0 years, male, NA, stage:2, alive, 840 days
8.2
DO45247
0 years, female, NA, stage:2, alive, 210 days
8.2
DO45153
0 years, female, NA, stage:2, alive, 1380 days
8.1
DO23543
0 years, male, NA, stage:2, alive, 1020 days
8.1
DO48720
0 years, female, NA, stage:2, alive, 570 days
8.1
DO48717
0 years, male, NA, stage:4, dead, 180 days
8.1
DO45143
0 years, male, NA, stage:3, alive, 1290 days
8.0
DO45123
0 years, female, NA, stage:2, dead, 570 days
7.9
DO45197
0 years, male, NA, stage:2, alive, 1170 days
7.9
DO45283
0 years, male, NA, stage:3, alive, 510 days
7.9
DO48743
0 years, female, NA, stage:2, alive, 570 days
7.8
DO45263
0 years, male, NA, stage:3, dead, 270 days
7.8
DO45155
0 years, male, NA, stage:2, alive, 2160 days
7.7
DO23519
0 years, male, NA, stage:3, alive, 630 days
7.7
DO45091
0 years, male, NA, stage:2, dead, 1320 days
7.7
DO50829
0 years, male, NA, stage:3, alive, 570 days
7.7
DO50787
0 years, male, NA, stage:3, alive, 480 days
7.6
DO48700
0 years, female, NA, stage:2, alive, 810 days
7.5
DO45257
0 years, male, NA, stage:3, alive, 810 days
7.5
DO50822
0 years, male, NA, stage:2, alive, 510 days
7.5
DO50809
0 years, male, NA, stage:3, dead, 720 days
7.5
DO45235
0 years, female, NA, stage:1, alive, 900 days
7.4
DO45167
0 years, male, NA, stage:2, dead, 1440 days
7.4
DO50785
0 years, male, NA, stage:4, dead, 90 days
7.4
DO23517
0 years, male, NA, stage:2, alive, 1200 days
7.3
DO45199
0 years, female, NA, stage:2, alive, 1350 days
7.3
DO48727
0 years, female, NA, stage:2, dead, 390 days
7.3
DO23510
0 years, female, NA, stage:2, alive, 870 days
7.3
DO45289
0 years, female, NA, stage:3, alive, 360 days
7.2
DO23525
0 years, male, NA, stage:4, alive, 1050 days
7.2
DO45221
0 years, female, NA, stage:4, dead, 390 days
7.2
DO48746
0 years, male, NA, stage:3, alive, 570 days
7.2
DO23542
0 years, male, NA, stage:3, alive, 960 days
7.1
DO45305
0 years, male, NA, stage:4, alive, 300 days
7.1
DO48716
0 years, male, NA, stage:2, alive, 720 days
7.0
DO45211
0 years, male, NA, stage:3, alive, 240 days
7.0
DO23535
0 years, male, NA, stage:1, alive, 960 days
7.0
DO45231
0 years, male, NA, stage:2, alive, 930 days
6.9
DO45111
0 years, male, NA, stage:2, alive, 1590 days
6.9
DO45159
0 years, male, NA, stage:3, alive, 1470 days
6.9
DO45269
0 years, male, NA, stage:3, alive, 750 days
6.9
DO23552
0 years, female, NA, stage:1, alive, 810 days
6.9
DO48712
0 years, male, NA, stage:2, alive, 810 days
6.9
DO50808
0 years, male, NA, stage:2, alive, 570 days
6.9
DO50820
0 years, female, NA, stage:3, alive, 510 days
6.9
DO48723
0 years, male, NA, stage:1, alive, 600 days
6.8
DO48679
0 years, male, NA, stage:2, alive, 1200 days
6.8
DO48760
0 years, female, NA, stage:2, alive, 690 days
6.8
DO50857
0 years, male, NA, stage:2, alive, 210 days
6.8
DO45193
0 years, female, NA, stage:4, dead, 120 days
6.8
DO45163
0 years, male, NA, stage:2, alive, 960 days
6.7
DO48742
0 years, male, NA, stage:2, alive, 600 days
6.7
DO48693
0 years, male, NA, stage:2, alive, 900 days
6.7
DO45103
0 years, male, NA, stage:3, alive, 450 days
6.7
DO45165
0 years, male, NA, stage:2, alive, 690 days
6.7
DO48733
0 years, male, NA, stage:2, alive, 600 days
6.7
DO45229
0 years, male, NA, stage:1, alive, 990 days
6.6
DO45307
0 years, female, NA, stage:4, dead, 240 days
6.6
DO227643
0 years, male, NA, stage:2, alive, 1260 days
6.6
DO45203
0 years, female, NA, stage:2, alive, 1170 days
6.5
DO50789
0 years, female, NA, stage:2, alive, 570 days
6.5
DO50800
0 years, male, NA, stage:2, alive, 510 days
6.5
DO45157
0 years, male, NA, stage:2, alive, 1980 days
6.5
DO45297
0 years, female, NA, stage:4, dead, 1260 days
6.5
DO45213
0 years, male, NA, stage:1, alive, 1200 days
6.5
DO48747
0 years, male, NA, stage:3, alive, 540 days
6.4
DO23523
0 years, male, NA, stage:3, alive, 1080 days
6.4
DO45109
0 years, male, NA, stage:2, alive, 1590 days
6.4
DO23545
0 years, male, NA, stage:2, dead, 570 days
6.3
DO45095
0 years, male, NA, stage:2, alive, 1620 days
6.3
DO45299
0 years, female, NA, stage:1, alive, 1440 days
6.3
DO23530
0 years, male, NA, stage:4, dead, 180 days
6.3
DO45287
0 years, male, NA, stage:1, alive, 390 days
6.3
DO45253
0 years, male, NA, stage:2, alive, 870 days
6.3
DO45177
0 years, female, NA, stage:3, alive, 1260 days
6.1
DO23538
0 years, male, NA, stage:2, alive, 450 days
6.1
DO45301
0 years, male, NA, stage:2, dead, 1440 days
6.1
DO45191
0 years, female, NA, stage:2, alive, 1200 days
6.1
DO48674
0 years, male, NA, stage:2, alive, 1260 days
6.0
DO48682
0 years, female, NA, stage:3, dead, 120 days
6.0
DO48761
0 years, male, NA, stage:2, alive, 870 days
6.0
DO45181
0 years, female, NA, stage:2, alive, 1200 days
6.0
DO48728
0 years, female, NA, stage:2, alive, 150 days
5.9
DO48725
0 years, male, NA, stage:1, alive, 780 days
5.9
DO50803
0 years, female, NA, stage:1, alive, 540 days
5.8
DO23511
0 years, female, NA, stage:3, dead, 180 days
5.7
DO50798
0 years, male, NA, stage:3, dead, 30 days
5.7
DO45137
0 years, male, NA, stage:1, alive, 1320 days
5.6
DO50805
0 years, male, NA, stage:2, alive, 690 days
5.6
DO50859
0 years, male, NA, stage:2, alive, 180 days
5.6
DO23518
0 years, male, NA, stage:2, alive, 1320 days
5.6
DO23521
0 years, male, NA, stage:3, alive, 1110 days
5.5
DO23531
0 years, female, NA, stage:3, alive, 900 days
5.4
DO48721
0 years, female, NA, stage:1, alive, 900 days
5.4
DO23550
0 years, male, NA, stage:1, alive, 990 days
5.4
DO45225
0 years, male, NA, stage:1, alive, 1050 days
5.3
DO45223
0 years, male, NA, stage:4, alive, 1020 days
5.3
DO45201
0 years, male, NA, stage:1, alive, 900 days
5.3
DO45169
0 years, male, NA, stage:3, alive, 1350 days
5.3
DO45279
0 years, male, NA, stage:3, alive, 1290 days
5.2
DO50778
0 years, male, NA, stage:4, alive, 630 days
5.0
DO23541
0 years, male, NA, stage:2, alive, 930 days
5.0
DO23544
0 years, male, NA, stage:2, alive, 960 days
4.9
DO45233
0 years, male, NA, stage:3, alive, 900 days
4.9
DO45245
0 years, female, NA, stage:2, dead, 240 days
4.9
DO45093
0 years, male, NA, stage:2, dead, 720 days
4.9
DO45251
0 years, female, NA, stage:2, alive, 900 days
4.8
DO48741
0 years, male, NA, stage:3, alive, 240 days
4.8
DO50850
0 years, male, NA, stage:3, alive, 720 days
4.8
DO48704
0 years, female, NA, stage:3, alive, 750 days
4.7
DO45135
0 years, male, NA, stage:1, alive, 1410 days
4.7
DO45119
0 years, male, NA, stage:3, dead, 510 days
4.5
DO50774
0 years, female, NA, stage:2, alive, 720 days
4.3
DO23551
0 years, male, NA, stage:3, dead, 150 days
4.2
DO227801
0 years, female, NA, stage:1, alive, 660 days
4.1
DO45195
0 years, male, NA, stage:1, alive, 390 days
4.1
DO45303
0 years, female, NA, stage:3, alive, 990 days
4.0
DO45261
0 years, male, NA, stage:3, alive, 990 days
3.8
DO45239
0 years, male, NA, stage:2, alive, 870 days
2.8
DO23509
0 years, male, NA, stage:3, dead, 780 days
2.7
DO45285
0 years, male, NA, stage:3, alive, 480 days
2.1
Show allShow less
LIVER HEPATOCELLULAR CARCINOMA - Protein relative expression (CPTAC)
Number of samples
330
Samples
Sample ID
Sample type
nRPX
967
Tumor
0.8
313
Tumor
0.7
1031
Tumor
0.7
647
Tumor
0.7
411
Tumor
0.7
533
Tumor
0.7
865
Tumor
0.7
814
Normal
0.6
517
Tumor
0.6
1013
Tumor
0.6
665
Tumor
0.6
943
Tumor
0.6
957
Tumor
0.6
777
Tumor
0.6
923
Tumor
0.5
497
Tumor
0.5
523
Tumor
0.5
513
Tumor
0.5
465
Tumor
0.5
123
Tumor
0.4
951
Tumor
0.4
921
Tumor
0.4
813
Tumor
0.4
161
Tumor
0.4
355
Tumor
0.4
463
Tumor
0.4
741
Tumor
0.4
487
Tumor
0.4
863
Tumor
0.4
351
Tumor
0.4
271
Tumor
0.4
277
Tumor
0.4
127
Tumor
0.4
913
Tumor
0.4
221
Tumor
0.4
615
Tumor
0.4
755
Tumor
0.4
861
Tumor
0.4
815
Tumor
0.3
1045
Tumor
0.3
431
Tumor
0.3
447
Tumor
0.3
525
Tumor
0.3
423
Tumor
0.3
1021
Tumor
0.3
227
Tumor
0.3
331
Tumor
0.3
357
Tumor
0.3
785
Tumor
0.3
112
Tumor
0.3
743
Tumor
0.3
413
Tumor
0.3
267
Tumor
0.3
873
Tumor
0.3
661
Tumor
0.3
131
Tumor
0.3
981
Tumor
0.3
535
Tumor
0.3
283
Tumor
0.3
1014
Normal
0.3
387
Tumor
0.3
937
Tumor
0.3
965
Tumor
0.3
162
Normal
0.3
963
Tumor
0.3
953
Tumor
0.3
695
Tumor
0.3
977
Tumor
0.2
148
Normal
0.2
361
Tumor
0.2
817
Tumor
0.2
125
Tumor
0.2
213
Tumor
0.2
435
Tumor
0.2
515
Tumor
0.2
553
Tumor
0.2
185
Tumor
0.2
343
Tumor
0.2
455
Tumor
0.2
367
Tumor
0.2
365
Tumor
0.2
573
Tumor
0.2
393
Tumor
0.2
257
Tumor
0.2
451
Tumor
0.2
433
Tumor
0.2
635
Tumor
0.2
641
Tumor
0.2
427
Tumor
0.2
727
Tumor
0.2
425
Tumor
0.2
141
Tumor
0.2
228
Normal
0.2
481
Tumor
0.2
391
Tumor
0.2
984
Normal
0.2
955
Tumor
0.2
1027
Tumor
0.2
881
Tumor
0.2
925
Tumor
0.2
473
Tumor
0.2
341
Tumor
0.2
877
Tumor
0.2
1016
Normal
0.2
737
Tumor
0.2
545
Tumor
0.2
392
Normal
0.2
187
Tumor
0.1
286
Normal
0.1
137
Tumor
0.1
467
Tumor
0.1
217
Tumor
0.1
1041
Tumor
0.1
491
Tumor
0.1
715
Tumor
0.1
975
Tumor
0.1
477
Tumor
0.1
171
Tumor
0.1
113
Tumor
0.1
142
Normal
0.1
978
Normal
0.1
388
Normal
0.1
685
Tumor
0.1
285
Tumor
0.1
328
Normal
0.1
663
Tumor
0.1
1015
Tumor
0.1
414
Normal
0.1
261
Tumor
0.1
883
Tumor
0.1
145
Tumor
0.1
258
Normal
0.1
284
Normal
0.1
786
Normal
0.1
756
Normal
0.1
211
Tumor
0.1
1042
Normal
0.1
186
Normal
0.1
1043
Tumor
0.1
147
Tumor
0.1
917
Tumor
0.1
443
Tumor
0.1
721
Tumor
0.1
571
Tumor
0.1
342
Normal
0.1
383
Tumor
0.1
713
Tumor
0.1
232
Normal
0.1
385
Tumor
0.1
954
Normal
0.1
867
Tumor
0.1
327
Tumor
0.1
912
Normal
0.1
222
Normal
0.0
376
Normal
0.0
982
Normal
0.0
857
Tumor
0.0
1032
Normal
0.0
724
Normal
0.0
375
Tumor
0.0
1046
Normal
0.0
884
Normal
0.0
412
Normal
0.0
493
Tumor
0.0
352
Normal
0.0
938
Normal
0.0
915
Tumor
0.0
224
Normal
0.0
983
Tumor
0.0
858
Normal
0.0
554
Normal
0.0
356
Normal
0.0
482
Normal
0.0
666
Normal
0.0
926
Normal
0.0
1025
Tumor
0.0
722
Normal
0.0
136
Normal
0.0
384
Normal
0.0
344
Normal
0.0
916
Normal
0.0
1026
Normal
0.0
744
Normal
0.0
464
Normal
0.0
672
Normal
0.0
212
Normal
0.0
527
Tumor
0.0
745
Tumor
0.0
526
Normal
0.0
268
Normal
0.0
944
Normal
0.0
461
Tumor
0.0
172
Normal
0.0
297
Tumor
0.0
516
Normal
0.0
686
Normal
0.0
778
Normal
0.0
396
Normal
0.0
567
Tumor
0.0
478
Normal
0.0
218
Normal
0.0
534
Normal
0.0
436
Normal
0.0
416
Normal
0.0
742
Normal
0.0
956
Normal
0.0
394
Normal
0.0
558
Normal
0.0
824
Normal
0.0
1044
Normal
0.0
368
Normal
0.0
138
Normal
0.0
466
Normal
0.0
964
Normal
0.0
568
Normal
0.0
444
Normal
0.0
563
Tumor
0.0
648
Normal
0.0
415
Tumor
0.0
866
Normal
0.0
958
Normal
0.0
272
Normal
0.0
557
Tumor
0.0
723
Tumor
0.0
421
Tumor
0.0
191
Tumor
0.0
922
Normal
0.0
132
Normal
0.0
662
Normal
0.0
882
Normal
0.0
518
Normal
0.0
363
Tumor
0.0
524
Normal
0.0
536
Normal
0.0
572
Normal
-0.1
1028
Normal
-0.1
546
Normal
-0.1
135
Tumor
-0.1
231
Tumor
-0.1
364
Normal
-0.1
195
Tumor
-0.1
426
Normal
-0.1
488
Normal
-0.1
428
Normal
-0.1
698
Normal
-0.1
472
Normal
-0.1
146
Normal
-0.1
111
Normal
-0.1
386
Normal
-0.1
574
Normal
-0.1
445
Tumor
-0.1
818
Normal
-0.1
851
Tumor
-0.1
918
Normal
-0.1
537
Tumor
-0.1
262
Normal
-0.1
126
Normal
-0.1
462
Normal
-0.1
196
Normal
-0.1
714
Normal
-0.1
664
Normal
-0.1
968
Normal
-0.1
728
Normal
-0.1
446
Normal
-0.1
114
Normal
-0.1
862
Normal
-0.1
314
Normal
-0.1
366
Normal
-0.1
494
Normal
-0.1
424
Normal
-0.1
868
Normal
-0.1
616
Normal
-0.1
746
Normal
-0.1
1022
Normal
-0.1
716
Normal
-0.1
528
Normal
-0.1
914
Normal
-0.1
432
Normal
-0.1
628
Normal
-0.1
456
Normal
-0.1
124
Normal
-0.1
642
Normal
-0.1
911
Tumor
-0.1
878
Normal
-0.1
484
Normal
-0.1
636
Normal
-0.1
192
Normal
-0.1
671
Tumor
-0.1
434
Normal
-0.1
448
Normal
-0.1
395
Tumor
-0.1
627
Tumor
-0.1
362
Normal
-0.2
354
Normal
-0.2
966
Normal
-0.2
452
Normal
-0.2
468
Normal
-0.2
696
Normal
-0.2
188
Normal
-0.2
471
Tumor
-0.2
874
Normal
-0.2
278
Normal
-0.2
422
Normal
-0.2
298
Normal
-0.2
952
Normal
-0.2
128
Normal
-0.2
214
Normal
-0.2
483
Tumor
-0.2
618
Normal
-0.2
498
Normal
-0.2
311
Tumor
-0.2
514
Normal
-0.2
474
Normal
-0.2
492
Normal
-0.2
353
Tumor
-0.2
852
Normal
-0.2
358
Normal
-0.2
312
Normal
-0.2
332
Normal
-0.2
924
Normal
-0.2
864
Normal
-0.3
738
Normal
-0.3
564
Normal
-0.3
823
Tumor
-0.3
697
Tumor
-0.3
816
Normal
-0.3
976
Normal
-0.3
538
Normal
-0.3
617
Tumor
-0.4
223
Tumor
-0.4
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LIVER CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
