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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
UBXN1 is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
103.1
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
283.5
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
240.4
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
182.6
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
176.4
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
162.2
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
159.7
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
154.0
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
147.6
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
145.3
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
144.8
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
131.2
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
129.6
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
128.5
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
124.2
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
124.0
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
122.7
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
119.5
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
116.1
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
114.5
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
114.4
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
113.8
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
110.9
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
108.2
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
106.3
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
103.9
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
103.1
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
101.8
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
101.8
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
100.6
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
100.3
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
99.9
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
98.6
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
97.8
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
97.4
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
95.4
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
94.9
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
93.7
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
93.2
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
91.4
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
88.6
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
88.2
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
87.6
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
85.5
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
85.1
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
83.5
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
82.0
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
77.2
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
73.9
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
73.8
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
70.7
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
68.4
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
64.8
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
62.9
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
62.3
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
61.7
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
61.6
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
61.0
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
59.7
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
57.7
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
51.5
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
50.9
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
46.9
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
33.6
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
UBXN1 is not prognostic in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
94.7
Number of samples
521
Samples
Sample
Description
TPM
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
215.5
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
170.2
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
166.2
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
165.3
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
157.7
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
157.3
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
156.8
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
153.1
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
151.9
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
151.5
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
150.3
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
148.9
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
148.7
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
148.5
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
148.1
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
144.6
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
144.2
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
144.2
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
143.1
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
142.2
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
139.8
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
139.6
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
139.5
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
139.5
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
139.0
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
138.8
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
138.3
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
138.0
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
137.1
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
136.8
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
136.7
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
135.6
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
135.0
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
133.7
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
133.5
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
133.3
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
133.0
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
132.9
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
132.9
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
132.7
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
132.5
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
132.3
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
132.3
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
131.8
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
131.2
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
130.2
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
130.2
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
129.0
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
128.8
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
128.8
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
128.3
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
128.0
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
128.0
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
127.7
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
127.5
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
127.1
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
126.1
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
125.9
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
125.6
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
125.4
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
124.9
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
124.9
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
124.9
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
124.7
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
124.1
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
124.0
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
123.9
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
123.9
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
123.3
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
123.2
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
123.1
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
123.1
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
122.9
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
122.8
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
122.3
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
122.3
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
121.9
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
121.4
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
121.4
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
121.3
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
121.3
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
121.0
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
120.8
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
120.5
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
120.3
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
120.1
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
120.1
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
120.0
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
120.0
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
120.0
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
120.0
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
119.8
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
119.3
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
119.3
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
119.1
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
118.6
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
118.1
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
117.2
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
117.1
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
116.8
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
116.7
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
116.3
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
116.0
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
116.0
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
115.9
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
115.8
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
115.8
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
115.8
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
115.7
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
115.7
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
115.5
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
115.4
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
115.1
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
115.0
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
114.9
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
114.8
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
114.6
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
114.5
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
114.1
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
114.1
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
114.1
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
114.1
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
114.0
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
114.0
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
113.7
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
113.7
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
113.4
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
113.0
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
112.8
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
112.8
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
112.7
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
112.5
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
112.4
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
112.2
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
112.2
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
112.1
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
111.9
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
111.8
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
110.7
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
110.5
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
110.4
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
110.3
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
110.1
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
110.1
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
109.9
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
109.7
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
109.7
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
109.4
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
109.3
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
109.3
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
109.0
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
108.9
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
108.8
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
108.6
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
108.3
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
108.3
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
108.2
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
108.2
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
108.0
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
107.9
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
107.7
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
107.4
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
107.3
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
107.0
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
106.7
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
106.6
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
106.6
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
106.4
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
106.1
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
105.9
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
105.3
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
105.0
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
105.0
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
104.9
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
104.8
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
104.8
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
104.8
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
104.6
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
104.3
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
104.2
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
104.1
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
104.0
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
103.9
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
103.7
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
103.6
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
103.6
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
103.5
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
103.4
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
103.4
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
103.4
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
103.3
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
103.3
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
103.2
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
103.2
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
102.9
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
102.4
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
102.2
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
102.1
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
102.0
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
101.9
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
101.8
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
101.7
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
101.5
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
101.5
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
101.3
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
101.3
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
101.2
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
101.2
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
101.1
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
101.0
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
100.8
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
100.6
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
100.6
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
100.6
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
100.3
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
100.2
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
100.0
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
99.9
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
99.4
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
99.3
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
99.2
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
99.1
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
99.0
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
98.8
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
98.6
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
98.6
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
98.4
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
98.4
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
98.3
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
98.1
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
98.0
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
97.9
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
97.6
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
97.4
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
97.4
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
97.2
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
97.2
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
97.2
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
97.1
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
97.0
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
96.8
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
96.6
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
96.6
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
96.6
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
96.4
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
96.2
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
96.2
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
95.8
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
95.7
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
95.7
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
95.5
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
95.5
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
95.4
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
95.4
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
95.2
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
95.1
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
95.0
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
94.8
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
94.7
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
94.6
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
94.4
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
94.0
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
93.9
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
93.8
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
93.8
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
93.7
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
93.7
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
93.5
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
93.3
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
93.3
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
93.2
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
93.1
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
93.1
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
93.0
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
92.7
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
92.5
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
92.4
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
92.3
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
92.3
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
91.6
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
91.5
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
91.4
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
91.3
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
91.1
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
90.5
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
90.5
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
90.4
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
90.4
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
90.4
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
90.2
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
90.0
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
90.0
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
89.8
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
89.8
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
89.6
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
89.6
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
89.3
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
89.1
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
89.0
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
88.9
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
88.5
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
88.4
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
88.0
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
87.8
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
87.6
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
87.2
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
87.2
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
87.0
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
87.0
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
86.9
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
86.7
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
86.6
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
86.2
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
86.0
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
86.0
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
85.9
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
85.9
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
85.8
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
85.7
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
85.6
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
85.6
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
85.3
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
85.3
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
85.2
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
85.2
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
85.2
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
84.9
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
84.9
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
84.8
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
84.7
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
84.5
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
84.1
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
84.0
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
83.8
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
83.7
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
83.7
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
83.6
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
83.5
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
83.3
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
82.7
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
82.6
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
82.5
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
82.2
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
81.7
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
81.5
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
81.4
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
81.4
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
81.1
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
80.9
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
80.9
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
80.5
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
80.5
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
80.5
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
80.5
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
80.3
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
80.3
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
80.3
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
80.1
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
80.0
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
80.0
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
79.9
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
79.6
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
79.4
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
79.3
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
79.1
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
79.1
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
79.1
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
79.0
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
78.9
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
78.7
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
78.7
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
78.6
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
78.5
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
78.4
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
78.3
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
78.3
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
78.2
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
78.2
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
78.0
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
77.9
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
77.9
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
77.7
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
77.7
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
77.5
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
77.4
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
77.3
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
77.1
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
77.0
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
77.0
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
76.8
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
76.6
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
76.2
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
76.2
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
76.1
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
75.8
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
75.8
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
75.7
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
75.1
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
75.1
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
74.8
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
74.6
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
74.6
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
74.5
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
74.3
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
74.3
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
74.1
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
74.0
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
74.0
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
73.9
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
73.8
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
73.6
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
73.6
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
73.2
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
73.1
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
73.1
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
73.1
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
72.7
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
72.6
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
72.1
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
72.0
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
72.0
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
71.9
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
71.7
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
71.5
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
71.3
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
71.2
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
71.2
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
71.0
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
70.8
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
70.6
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
70.2
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
70.1
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
69.6
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
69.4
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
69.0
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
69.0
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
68.8
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
68.6
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
68.6
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
68.5
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
68.4
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
68.2
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
68.1
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
68.1
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
67.7
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
67.6
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
67.5
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
67.3
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
67.2
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
67.1
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
67.0
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
66.7
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
66.7
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
66.4
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
66.4
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
66.1
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
65.8
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
65.7
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
65.5
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
65.5
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
65.5
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
65.3
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
65.2
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
65.0
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
64.8
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
64.6
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
64.6
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
64.4
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
64.3
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
63.9
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
63.7
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
63.6
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
63.6
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
63.5
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
63.3
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
62.9
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
62.5
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
62.1
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
61.8
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
61.8
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
61.8
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
60.1
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
59.6
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
58.8
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
58.6
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
58.6
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
58.6
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
58.4
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
57.5
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
57.5
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
56.9
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
56.6
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
56.5
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
56.1
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
56.1
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
56.0
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
55.9
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
55.5
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
55.0
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
54.4
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
54.2
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
54.2
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
51.7
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
51.5
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
49.8
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
49.6
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
49.3
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
49.1
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
43.7
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
43.3
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
42.8
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
40.9
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
39.6
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
37.9
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
37.7
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
37.1
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
36.0
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
35.3
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
31.2
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
10.1
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
UBXN1 is not prognostic in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
82.2
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
179.0
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
159.5
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
147.3
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
145.1
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
143.9
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
135.6
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
127.7
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
124.4
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
118.4
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
118.0
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
111.2
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
106.8
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
105.4
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
102.5
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
102.2
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
99.6
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
99.6
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
99.0
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
98.9
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
96.3
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
96.3
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
94.0
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
93.5
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
92.2
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
91.2
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
91.0
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
90.0
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
89.8
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
89.7
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
89.2
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
88.3
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
87.5
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
86.9
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
86.5
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
86.5
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
84.0
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
83.9
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
83.8
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
83.4
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
82.8
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
82.7
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
82.6
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
82.2
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
82.2
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
82.0
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
82.0
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
81.9
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
81.4
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
80.8
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
80.5
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
79.2
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
78.9
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
78.9
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
78.6
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
78.3
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
78.1
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
78.1
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
78.1
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
75.9
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
75.7
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
74.6
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
73.6
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
73.3
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
73.2
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
71.9
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
71.8
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
71.6
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
70.3
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
70.1
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
69.6
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
69.5
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
68.7
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
68.3
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
68.1
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
67.1
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
66.6
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
66.0
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
64.9
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
64.9
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
63.8
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
63.1
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
62.1
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
61.3
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
59.3
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
59.0
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
58.7
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
58.4
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
56.7
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
56.0
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
55.7
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
51.6
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
49.6
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
48.6
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
47.7
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
46.1
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
45.7
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
45.3
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
43.5
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
42.1
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
UBXN1 is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
123.5
Number of samples
282
Samples
Sample
Description
TPM
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
284.9
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
276.7
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
266.6
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
264.7
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
257.1
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
256.1
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
247.9
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
244.6
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
238.4
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
224.9
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
224.2
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
222.2
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
220.4
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
216.4
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
212.3
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
208.6
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
208.2
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
207.7
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
205.7
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
204.6
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
203.4
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
192.7
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
189.4
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
185.0
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
183.8
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
182.1
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
181.7
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
180.0
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
176.0
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
173.8
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
172.6
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
172.4
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
170.6
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
170.3
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
169.1
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
169.1
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
168.5
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
168.4
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
167.3
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
165.9
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
164.2
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
163.4
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
163.1
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
162.9
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
162.7
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
162.1
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
161.2
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
160.2
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
159.5
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
158.9
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
157.7
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
157.7
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
154.4
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
154.3
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
153.1
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
151.3
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
150.8
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
150.4
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
150.0
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
149.5
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
149.0
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
148.7
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
147.8
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
147.3
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
147.0
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
146.5
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
146.3
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
144.4
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
144.2
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
144.2
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
143.6
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
143.6
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
142.3
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
141.5
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
140.8
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
140.8
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
140.6
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
140.6
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
139.2
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
139.0
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
137.7
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
136.7
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
136.7
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
136.5
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
136.5
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
136.4
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
136.3
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
136.1
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
135.8
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
135.4
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
133.8
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
132.8
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
132.6
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
132.4
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
132.0
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
131.7
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
130.7
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
130.0
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
129.9
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
129.5
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
129.3
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
129.3
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
129.2
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
129.2
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
129.1
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
129.1
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
129.0
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
128.8
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
128.6
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
128.3
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
128.0
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
127.9
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
127.8
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
126.3
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
126.2
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
125.0
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
124.7
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
123.9
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
123.8
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
123.7
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
123.6
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
123.2
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
123.1
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
122.8
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
122.4
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
122.2
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
122.1
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
122.0
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
121.9
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
121.8
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
121.5
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
121.4
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
120.7
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
120.7
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
120.4
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
120.2
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
120.1
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
119.7
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
119.6
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
119.2
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
119.2
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
119.0
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
118.5
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
118.5
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
118.3
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
118.2
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
117.5
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
117.4
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
116.7
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
115.9
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
115.3
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
114.8
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
114.4
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
114.3
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
113.4
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
112.9
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
112.9
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
112.7
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
112.7
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
112.3
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
112.2
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
111.5
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
111.4
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
110.6
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
110.6
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
110.4
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
110.3
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
110.2
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
109.5
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
109.3
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
108.9
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
107.8
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
107.0
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
105.5
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
105.0
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
104.8
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
104.7
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
104.4
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
104.4
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
104.3
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
103.2
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
102.8
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
102.7
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
102.1
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
102.1
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
101.8
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
101.0
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
100.3
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
100.2
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
99.9
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
99.8
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
99.5
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
99.3
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
99.2
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
98.7
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
98.7
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
98.5
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
98.1
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
97.7
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
97.6
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
97.4
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
97.3
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
97.3
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
96.6
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
96.3
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
95.8
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
94.7
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
94.6
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
94.3
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
93.2
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
93.1
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
92.4
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
92.0
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
91.8
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
91.5
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
91.2
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
91.2
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
91.2
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
90.9
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
90.5
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
90.3
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
90.0
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
89.9
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
89.7
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
89.2
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
88.6
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
87.8
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
86.6
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
86.1
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
85.2
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
84.9
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
84.7
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
84.0
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
83.7
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
83.2
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
82.9
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
82.9
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
81.9
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
81.5
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
80.7
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
80.0
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
79.9
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
79.9
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
79.6
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
79.4
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
79.0
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
78.8
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
78.3
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
78.3
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
78.1
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
77.3
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
76.8
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
75.1
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
74.6
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
73.7
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
73.0
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
72.5
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
72.2
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
72.1
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
72.0
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
72.0
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
71.4
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
70.9
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
70.8
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
69.4
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
67.6
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
67.5
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
67.3
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
67.2
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
65.5
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
64.3
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
62.7
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
60.8
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
60.6
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
60.6
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
57.3
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
54.3
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
50.6
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
48.5
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
46.9
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
43.6
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
34.6
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RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0088550004
Tumor
0.7
CPT0079180003
Tumor
0.6
CPT0017410003
Tumor
0.5
CPT0078660003
Tumor
0.5
CPT0001500009
Tumor
0.4
CPT0078510003
Tumor
0.4
CPT0001340003
Tumor
0.4
CPT0006440003
Tumor
0.4
CPT0012900004
Tumor
0.3
CPT0076330003
Tumor
0.3
CPT0015730003
Tumor
0.3
CPT0075560003
Tumor
0.3
CPT0009060003
Tumor
0.3
CPT0006630003
Tumor
0.3
CPT0024680001
Normal
0.3
CPT0078800003
Tumor
0.3
CPT0079380003
Tumor
0.3
CPT0092790003
Tumor
0.2
CPT0088970003
Tumor
0.2
CPT0092190003
Normal
0.2
CPT0065870003
Tumor
0.2
CPT0065430003
Tumor
0.2
CPT0011240003
Tumor
0.2
CPT0000870016
Tumor
0.2
CPT0015810003
Tumor
0.2
CPT0065930003
Tumor
0.2
CPT0086030003
Tumor
0.2
CPT0066480003
Tumor
0.2
CPT0010120001
Normal
0.2
CPT0086360003
Tumor
0.2
CPT0012640003
Normal
0.2
CPT0075720003
Tumor
0.2
CPT0000780007
Tumor
0.2
CPT0001270001
Normal
0.2
CPT0009000003
Tumor
0.2
CPT0007860003
Tumor
0.2
CPT0014470001
Normal
0.2
CPT0025350003
Tumor
0.2
CPT0065690003
Tumor
0.2
CPT0014370004
Tumor
0.2
CPT0092160003
Tumor
0.2
CPT0079510001
Normal
0.2
CPT0000640003
Tumor
0.1
CPT0092730003
Tumor
0.1
CPT0020120003
Tumor
0.1
CPT0012370003
Tumor
0.1
CPT0079300001
Normal
0.1
CPT0078990003
Tumor
0.1
CPT0001540009
Tumor
0.1
CPT0077490003
Tumor
0.1
CPT0078530001
Normal
0.1
CPT0071150004
Tumor
0.1
CPT0017450001
Normal
0.1
CPT0012920003
Normal
0.1
CPT0065810003
Tumor
0.1
CPT0081600003
Tumor
0.1
CPT0088570001
Normal
0.1
CPT0084560003
Tumor
0.1
CPT0019160001
Normal
0.1
CPT0085670003
Tumor
0.1
CPT0010110003
Tumor
0.1
CPT0066470004
Tumor
0.1
CPT0021240003
Tumor
0.1
CPT0002270011
Tumor
0.1
CPT0012280003
Tumor
0.1
CPT0009080003
Normal
0.1
CPT0015910003
Tumor
0.1
CPT0064400001
Normal
0.1
CPT0010160003
Tumor
0.1
CPT0018250001
Normal
0.1
CPT0088760003
Tumor
0.1
CPT0075570001
Normal
0.1
CPT0086870003
Tumor
0.1
CPT0001180009
Tumor
0.1
CPT0001190001
Normal
0.1
CPT0084590001
Normal
0.1
CPT0014130001
Normal
0.1
CPT0012180003
Tumor
0.1
CPT0009020003
Normal
0.1
CPT0012670003
Tumor
0.1
CPT0077110003
Tumor
0.1
CPT0025110003
Tumor
0.1
CPT0025170003
Tumor
0.1
CPT0088900003
Tumor
0.1
CPT0086830003
Normal
0.1
CPT0000660001
Normal
0.1
CPT0002370001
Normal
0.1
CPT0025610001
Normal
0.1
CPT0063330001
Normal
0.0
CPT0025060001
Normal
0.0
CPT0023710001
Normal
0.0
CPT0020130001
Normal
0.0
CPT0026410003
Tumor
0.0
CPT0075170001
Normal
0.0
CPT0088630003
Tumor
0.0
CPT0023690003
Tumor
0.0
CPT0064370003
Tumor
0.0
CPT0069000003
Tumor
0.0
CPT0012570003
Normal
0.0
CPT0078670001
Normal
0.0
CPT0082010001
Normal
0.0
CPT0087040003
Tumor
0.0
CPT0001230001
Normal
0.0
CPT0088920001
Normal
0.0
CPT0069190001
Normal
0.0
CPT0023360001
Normal
0.0
CPT0079230003
Tumor
0.0
CPT0081620001
Normal
0.0
CPT0006900003
Tumor
0.0
CPT0025290003
Tumor
0.0
CPT0086890003
Normal
0.0
CPT0001260009
Tumor
0.0
CPT0007470001
Normal
0.0
CPT0092290003
Tumor
0.0
CPT0075130003
Tumor
0.0
CPT0078940001
Normal
0.0
CPT0001550001
Normal
0.0
CPT0079480003
Tumor
0.0
CPT0001510001
Normal
0.0
CPT0025920001
Normal
0.0
CPT0065450001
Normal
0.0
CPT0001220008
Tumor
0.0
CPT0079430001
Normal
0.0
CPT0092310003
Normal
0.0
CPT0007870001
Normal
0.0
CPT0079270003
Tumor
0.0
CPT0065820001
Normal
0.0
CPT0065750003
Tumor
0.0
CPT0007320003
Tumor
0.0
CPT0087050003
Normal
0.0
CPT0014160003
Tumor
0.0
CPT0092800003
Normal
0.0
CPT0078930003
Tumor
0.0
CPT0077500001
Normal
0.0
CPT0010170001
Normal
0.0
CPT0069010001
Normal
0.0
CPT0000890001
Normal
0.0
CPT0086970003
Normal
0.0
CPT0012290003
Normal
0.0
CPT0006730001
Normal
0.0
CPT0025880003
Tumor
0.0
CPT0089020003
Tumor
0.0
CPT0079410003
Tumor
0.0
CPT0088640003
Normal
0.0
CPT0089480003
Normal
-0.1
CPT0089460004
Tumor
-0.1
CPT0086370003
Normal
-0.1
CPT0078840001
Normal
-0.1
CPT0017850003
Tumor
-0.1
CPT0024670003
Tumor
-0.1
CPT0088500001
Normal
-0.1
CPT0006530001
Normal
-0.1
CPT0011410003
Tumor
-0.1
CPT0089040001
Normal
-0.1
CPT0012090003
Normal
-0.1
CPT0088480003
Tumor
-0.1
CPT0077140001
Normal
-0.1
CPT0081990003
Tumor
-0.1
CPT0000790001
Normal
-0.1
CPT0077320001
Normal
-0.1
CPT0025580004
Tumor
-0.1
CPT0012770003
Normal
-0.1
CPT0063320003
Tumor
-0.1
CPT0006950001
Normal
-0.1
CPT0014350001
Normal
-0.1
CPT0020020001
Normal
-0.1
CPT0088690003
Tumor
-0.1
CPT0078830003
Tumor
-0.1
CPT0066520001
Normal
-0.1
CPT0013790003
Normal
-0.1
CPT0069160003
Tumor
-0.1
CPT0079000001
Normal
-0.1
CPT0001350001
Normal
-0.1
CPT0066430001
Normal
-0.1
CPT0081880003
Tumor
-0.1
CPT0086820003
Tumor
-0.1
CPT0025050003
Tumor
-0.1
CPT0063630003
Tumor
-0.1
CPT0063640001
Normal
-0.1
CPT0086950003
Tumor
-0.1
CPT0025230003
Tumor
-0.1
CPT0092740003
Normal
-0.1
CPT0019130003
Tumor
-0.2
CPT0019990003
Tumor
-0.2
CPT0088710001
Normal
-0.2
CPT0012550003
Tumor
-0.2
CPT0077310003
Tumor
-0.2
CPT0088780001
Normal
-0.2
CPT0002350011
Tumor
-0.2
CPT0076350001
Normal
-0.2
CPT0012080003
Tumor
-0.2
CPT0023350003
Tumor
-0.2
CPT0014450004
Tumor
-0.3
CPT0026420001
Normal
-0.3
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
