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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
98.7
nTPM
HPA Brain:
53.9
nTPM
GTEx:
98.7
nTPM
FANTOM5:
100.6
Scaled Tags Per Million
Pig:
48.2
nTPM
Mouse:
117.3
nTPM
Allen mouse:
9.2
Expression energy
AMYGDALA - HPA Brain RNA-seq
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
53.9
Sample id
Sample description
nTPM
Amygdala nTPM: 53.9
2695
Female, age 67, right hemisphere
68.5
2514
Male, age 75, right hemisphere
55.3
2517
Female, age 94, left hemisphere
51.3
2814
Male, age 76, right hemisphere
49.1
1987
Female, age 91, left hemisphere
45.4
Basal amygdala nTPM: 46.9
2609
Male, age 75, right hemisphere
58.0
2827
Female, age 67, right hemisphere
56.2
2110
Male, age 80, left hemisphere
43.4
2243
Female, age 91, right hemisphere
42.7
2685
Female, age 94, left hemisphere
40.9
1955
Male, age 76, both hemispheres
40.5
Central amygdala nTPM: 51.4
2826
Female, age 94, left hemisphere
70.1
2515
Male, age 75, right hemisphere
50.2
2239
Male, age 80, left hemisphere
48.6
1905
Male, age 76, both hemispheres
47.3
2701
Female, age 91, right hemisphere
41.1
Corticomedial amygdala nTPM: 45.1
2535
Female, age 67, right hemisphere
50.6
2428
Male, age 75, right hemisphere
49.4
2240
Male, age 76, both hemispheres
47.3
2829
Male, age 80, left hemisphere
44.7
2242
Female, age 91, right hemisphere
40.0
2429
Female, age 94, left hemisphere
38.5
Lateral amygdala nTPM: 51.2
2830
Female, age 67, right hemisphere
64.2
2516
Male, age 75, right hemisphere
56.2
2534
Female, age 94, left hemisphere
54.4
2256
Male, age 80, left hemisphere
46.3
1883
Male, age 76, both hemispheres
46.2
2255
Female, age 91, right hemisphere
39.6
AMYGDALA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
98.7
GTEx sample id
Sample description
nTPM
Brain - Amygdala Average nTPM: 98.7
Samples: 152
Max nTPM: 195.0
Min nTPM: 39.7
Std nTPM: 23.4
Median nTPM: 94.8
GTEX-1JMQJ-0011-R4b-SM-EXUT8
50-59 years, male
195.0
GTEX-14E7W-0011-R4b-SM-62LEA
70-79 years, male
189.6
GTEX-17HG3-0011-R4a-SM-7IGLL
30-39 years, female
180.4
GTEX-1F75A-0011-R4a-SM-ARL8J
50-59 years, male
164.5
GTEX-14JG1-0011-R4b-SM-62LEB
40-49 years, male
162.5
GTEX-12WSH-0011-R4a-SM-5GU6K
50-59 years, male
162.4
GTEX-14JFF-0011-R4a-SM-5ZZV5
60-69 years, male
151.9
GTEX-145MI-0011-R4b-SM-5PNZH
60-69 years, female
146.6
GTEX-147GR-0011-R4a-SM-5S2V2
60-69 years, male
144.2
GTEX-1B8L1-0011-R4a-SM-7EWFJ
60-69 years, male
137.1
GTEX-1JJEA-0011-R4a-SM-EXUTC
60-69 years, male
135.1
GTEX-1J1OQ-0011-R4a-SM-D4P2A
40-49 years, female
131.6
GTEX-13QIC-0011-R4a-SM-5PNX8
60-69 years, female
127.4
GTEX-14JIY-0011-R4b-SM-5ZZV7
60-69 years, male
127.2
GTEX-13NYS-0011-R4b-SM-5MR3O
60-69 years, male
126.0
GTEX-1J8Q2-0011-R4a-SM-ADEHA
60-69 years, male
124.1
GTEX-12WSA-0011-R4a-SM-57WB7
60-69 years, male
121.4
GTEX-183WM-0011-R4a-SM-7LG6S
70-79 years, female
120.8
GTEX-1CB4G-0011-R4b-SM-CJI28
60-69 years, male
120.8
GTEX-1H1CY-0011-R4b-SM-CJI3G
60-69 years, female
120.2
GTEX-1LVAO-0011-R4a-SM-EXURO
60-69 years, male
120.1
GTEX-Y8DK-0011-R4A-SM-EXUR1
60-69 years, male
119.7
GTEX-1C6WA-0011-R4a-SM-9QEH2
60-69 years, male
119.5
GTEX-1C6VR-0011-R4b-SM-9QEGZ
60-69 years, male
119.0
GTEX-N7MS-0011-R4a-SM-2HMKW
60-69 years, male
118.4
GTEX-17EVP-0011-R4a-SM-79OML
40-49 years, male
118.2
GTEX-1H2FU-0011-R4a-SM-CL551
60-69 years, female
117.7
GTEX-1F7RK-0011-R4b-SM-9QEI7
20-29 years, female
113.5
GTEX-12ZZZ-0011-R4b-SM-5DUV7
60-69 years, male
112.0
GTEX-14PJM-0011-R4a-SM-5YYAS
50-59 years, female
112.0
GTEX-13OVH-0011-R4a-SM-5KM3W
70-79 years, male
111.2
GTEX-13OVL-0011-R4b-SM-5L3HV
50-59 years, male
109.7
GTEX-16YQH-0011-R4a-SM-7EPGI
30-39 years, male
109.7
GTEX-139T8-0011-R4a-SM-5HL54
60-69 years, male
108.9
GTEX-1F6IF-0011-R4b-SM-CKZNJ
60-69 years, male
108.7
GTEX-15SHU-0011-R4b-SM-7IGLC
40-49 years, female
108.2
GTEX-13NYB-0011-R4b-SM-9QEGJ
40-49 years, male
107.0
GTEX-13O3Q-0011-R4a-SM-5P9H2
50-59 years, male
106.7
GTEX-13VXU-0011-R4b-SM-5O9CI
50-59 years, male
106.2
GTEX-12WSF-0011-R4b-SM-5HL88
70-79 years, male
106.1
GTEX-13X6J-0011-R4b-SM-5P9K4
50-59 years, male
106.0
GTEX-13FLV-0011-R4a-SM-5LZYU
50-59 years, male
105.3
GTEX-1GZ4I-0011-R4a-SM-9QEI9
50-59 years, male
104.8
GTEX-QVUS-0011-R4A-SM-3GAE7
60-69 years, female
103.2
GTEX-13JVG-0011-R4a-SM-5MR4C
60-69 years, male
102.9
GTEX-1LSVX-0011-R4b-SM-EXURP
60-69 years, male
102.0
GTEX-13CZV-0011-R4b-SM-5J2NY
60-69 years, male
101.6
GTEX-131XH-0011-R4b-SM-5DUWB
50-59 years, male
101.4
GTEX-11ONC-0011-R4b-SM-DO93H
60-69 years, male
101.4
GTEX-1HBPI-0011-R4a-SM-CJI3K
50-59 years, male
101.3
GTEX-1N2DW-0011-R4b-SM-EZ6MD
50-59 years, male
101.3
GTEX-14PQA-0011-R4b-SM-6AJBU
50-59 years, female
101.2
GTEX-1E1VI-0011-R4b-SM-9QEHV
50-59 years, male
100.9
GTEX-1EX96-0011-R4a-SM-ARU82
50-59 years, male
100.1
GTEX-13OW7-0011-R4b-SM-5O9CX
50-59 years, male
99.3
GTEX-1GTWX-0011-R4a-SM-C1YQI
60-69 years, male
99.2
GTEX-11ZU8-0011-R4a-SM-5BC6Y
60-69 years, male
99.0
GTEX-13SLX-0011-R4a-SM-5O9BJ
50-59 years, female
99.0
GTEX-12WSD-0011-R4b-SM-5LZUA
60-69 years, female
98.9
GTEX-11TTK-0011-R4a-SM-DNZZU
60-69 years, female
98.9
GTEX-13OW6-0011-R4a-SM-5O9DX
50-59 years, male
98.4
GTEX-ZAK1-0011-R4a-SM-6AJBK
50-59 years, female
98.4
GTEX-1IY9M-0011-R4a-SM-C1YQ2
60-69 years, male
98.3
GTEX-1JN6P-0011-R4a-SM-EZ6MS
60-69 years, male
97.9
GTEX-1HFI6-0011-R4b-SM-A96RT
40-49 years, male
97.7
GTEX-12ZZW-0011-R4a-SM-5DUX9
50-59 years, male
97.4
GTEX-1313W-0011-R4b-SM-5KLZV
50-59 years, female
97.4
GTEX-14ASI-0011-R4a-SM-69LQ4
60-69 years, male
97.4
GTEX-X4XX-0011-R4B-SM-46MWL
60-69 years, male
97.0
GTEX-15CHQ-0011-R4a-SM-686ZX
60-69 years, male
96.9
GTEX-18464-0011-R4a-SM-7LG6T
50-59 years, male
96.2
GTEX-1A3MX-0011-R4b-SM-7EWFK
60-69 years, male
96.0
GTEX-1I1GR-0011-R4a-SM-CMKHC
60-69 years, male
95.6
GTEX-X585-0011-R4B-SM-46MVH
50-59 years, male
95.5
GTEX-ZAB4-0011-R4a-SM-4SOKB
40-49 years, male
95.4
GTEX-1N2EE-0011-R4a-SM-EXOII
60-69 years, male
95.2
GTEX-ZE9C-0011-R4a-SM-4WKH6
60-69 years, male
94.3
GTEX-1HBPH-0011-R4a-SM-A96RX
40-49 years, female
94.2
GTEX-1AX9I-0011-R4b-SM-7EPIB
60-69 years, male
93.9
GTEX-WHSE-0011-R4A-SM-3P5ZN
20-29 years, male
93.6
GTEX-15DDE-0011-R4b-SM-7KULI
50-59 years, female
93.1
GTEX-11PRG-0011-R4a-SM-DNZZR
50-59 years, male
92.4
GTEX-1ICLZ-0011-R4a-SM-CMKHL
60-69 years, male
92.3
GTEX-144GL-0011-R4a-SM-5PNUI
50-59 years, male
92.2
GTEX-1GF9W-0011-R4a-SM-CE6RH
60-69 years, male
92.0
GTEX-13N1W-0011-R4a-SM-5MR52
70-79 years, male
91.4
GTEX-1F48J-0011-R4b-SM-9OSVX
50-59 years, female
91.4
GTEX-13O3O-0011-R4b-SM-5KM3F
60-69 years, female
91.3
GTEX-14DAQ-0011-R4a-SM-5YYAI
60-69 years, female
90.6
GTEX-13OW8-0011-R4a-SM-9WG6V
60-69 years, male
90.6
GTEX-1GMR8-0011-R4a-SM-9OSX1
50-59 years, female
90.3
GTEX-13SLW-0011-R4b-SM-5S2W2
70-79 years, male
90.2
GTEX-13112-0011-R4b-SM-5DUXL
50-59 years, male
90.1
GTEX-NPJ8-0011-R4a-SM-2HML3
40-49 years, male
89.6
GTEX-WVLH-0011-R4A-SM-3MJFS
50-59 years, male
89.6
GTEX-15EO6-0011-R4a-SM-7KUKZ
50-59 years, male
88.8
GTEX-1H1DG-0011-R4a-SM-CE6RQ
70-79 years, male
88.8
GTEX-ZVZQ-0011-R4b-SM-57WCZ
60-69 years, female
88.6
GTEX-15ER7-0011-R4a-SM-6M46S
20-29 years, female
88.2
GTEX-OHPN-0011-R4A-SM-2I5FD
60-69 years, female
88.1
GTEX-YFC4-0011-R4a-SM-4RGLQ
40-49 years, female
88.0
GTEX-145LS-0011-R4b-SM-5S2UT
60-69 years, female
87.9
GTEX-1H23P-0011-R4b-SM-CL54R
60-69 years, male
87.7
GTEX-13OW5-0011-R4b-SM-5L3HS
60-69 years, male
87.2
GTEX-NL3H-0011-R4a-SM-2I3GK
60-69 years, male
87.0
GTEX-13X6I-0011-R4b-SM-5PNU9
60-69 years, male
86.7
GTEX-T5JC-0011-R4A-SM-32PLT
20-29 years, male
86.1
GTEX-131YS-0011-R4a-SM-5DUVL
60-69 years, female
85.7
GTEX-13N2G-0011-R4b-SM-5MR54
60-69 years, male
85.2
GTEX-1EMGI-0011-R4b-SM-CJI2D
60-69 years, male
85.0
GTEX-TSE9-0011-R4A-SM-3DB7H
60-69 years, female
84.9
GTEX-17F97-0011-R4b-SM-7KFS2
50-59 years, male
84.4
GTEX-1399T-0011-R4b-SM-5DUVX
60-69 years, male
84.3
GTEX-1J8EW-0011-R4b-SM-ARU89
60-69 years, female
84.2
GTEX-17EVQ-0011-R4b-SM-7LT94
70-79 years, male
84.1
GTEX-WZTO-0011-R4A-SM-3NMC7
40-49 years, male
84.0
GTEX-QVJO-0011-R4A-SM-2S1QL
60-69 years, female
83.8
GTEX-11NUK-0011-R4a-SM-DO12B
50-59 years, male
83.5
GTEX-1HB9E-0011-R4b-SM-ARZLS
50-59 years, male
83.1
GTEX-1HCU6-0011-R4b-SM-ARU74
60-69 years, female
82.9
GTEX-RNOR-0011-R4A-SM-3GAD3
50-59 years, female
82.8
GTEX-15DCD-0011-R4a-SM-69LPB
70-79 years, female
82.5
GTEX-14BIM-0011-R4b-SM-5S2RK
60-69 years, female
82.4
GTEX-R55E-0011-R4A-SM-2TC5H
20-29 years, male
82.3
GTEX-13RTJ-0011-R4b-SM-5PNX1
60-69 years, male
82.2
GTEX-1CB4J-0011-R4b-SM-9WG5P
60-69 years, male
81.6
GTEX-1H3O1-0011-R4b-SM-A9SKE
60-69 years, male
81.5
GTEX-1H1ZS-0011-R4b-SM-CKZO7
70-79 years, male
81.3
GTEX-14PN4-0011-R4a-SM-686ZT
50-59 years, male
81.2
GTEX-14ABY-0011-R4b-SM-5S2VN
50-59 years, male
80.2
GTEX-15DYW-0011-R4a-SM-6M46V
60-69 years, female
80.2
GTEX-UTHO-0011-R4A-SM-3GIJP
60-69 years, male
78.9
GTEX-13X6K-0011-R4b-SM-5P9HO
60-69 years, female
78.8
GTEX-QMR6-0011-R4A-SM-32PKU
50-59 years, male
77.9
GTEX-1445S-0011-R4a-SM-5PNWN
60-69 years, male
77.6
GTEX-1B996-0011-R4b-SM-9OSVO
60-69 years, male
77.4
GTEX-XLM4-0011-R4B-SM-4AT5C
60-69 years, male
75.3
GTEX-13OVJ-0011-R4b-SM-5P9H5
50-59 years, female
74.9
GTEX-1H3NZ-0011-R4a-SM-CL54T
60-69 years, male
74.9
GTEX-NPJ7-0011-R4a-SM-2I3GJ
60-69 years, female
74.3
GTEX-11ZVC-0011-R4a-SM-5BC6Z
50-59 years, female
74.0
GTEX-13PVQ-0011-R4a-SM-5O9CT
50-59 years, male
74.0
GTEX-Q2AG-0011-R4A-SM-2HMKA
40-49 years, female
74.0
GTEX-X4EP-0011-R4B-SM-3P627
60-69 years, female
73.4
GTEX-N7MT-0011-R4a-SM-2I3G9
60-69 years, female
72.7
GTEX-1GN73-0011-R4b-SM-9QEIK
60-69 years, male
72.2
GTEX-P44G-0011-R4A-SM-2I3FB
30-39 years, male
71.4
GTEX-NL4W-0011-R4a-SM-2I5GZ
50-59 years, male
66.6
GTEX-S7SE-0011-R4A-SM-2XCDB
50-59 years, male
66.1
GTEX-P44H-0011-R4A-SM-2XCEW
40-49 years, male
59.9
GTEX-QDT8-0011-R4A-SM-32PKM
30-39 years, female
58.6
GTEX-T6MN-0011-R4A-SM-32QPG
50-59 years, male
39.7
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AMYGDALA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
117.3
Mouse sample
Sample description
nTPM
Amygdala nTPM: 117.3
Samples: 4
Max nTPM: 125.6
Min nTPM: 105.7
Sample A
Male
116.9
Sample B
Male
120.8
Sample C
Female
125.6
Sample D
Female
105.7
AMYGDALA - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
Max subtype Expression energyi
Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.