HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni
Consensus:30.2 nTPM
HPA Brain:42.5 nTPM
GTEx:30.2 nTPM
FANTOM5:11.4 Scaled Tags Per Million
Pig:25.0 nTPM
Mouse:50.1 nTPM
Allen mouse:8.7 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA060290
Glial cells Not detected
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 42.5
Sample id Sample description nTPM
Hippocampus
nTPM: 40.4
2621 Female, age 67, right hemisphere 43.8
2529 Female, age 94, left hemisphere 43.7
2148 Female, age 91, left hemisphere 41.3
1898 Male, age 80, left hemisphere 39.9
1855 Male, age 76, left hemisphere 37.8
1911 Female, age 85, right hemisphere 35.8
Dentate gyrus
nTPM: 39.5
2531 Female, age 67, both hemispheres 43.7
2530 Female, age 94, left hemisphere 39.7
1927 Female, age 91, both hemispheres 39.2
2246 Female, age 85, both hemispheres 39.2
2528 Male, age 74, both hemispheres 37.7
2010 Male, age 76, both hemispheres 37.3
Entorhinal gyrus
nTPM: 42.5
2613 Female, age 94, left hemisphere 46.6
2764 Male, age 80, right hemisphere 46.1
1787 Male, age 76, left hemisphere 43.1
1938 Female, age 85, left hemisphere 41.1
2686 Male, age 75, right hemisphere 40.3
2117 Female, age 91, right hemisphere 37.7
Hippocampus, CA1
nTPM: 40.0
2749 Male, age 80, left hemisphere 46.1
2082 Female, age 91, right hemisphere 39.4
1873 Female, age 85, both hemispheres 39.1
2527 Male, age 74, both hemispheres 38.0
2045 Male, age 76, both hemispheres 37.2
Hippocampus, CA2
nTPM: 40.3
1963 Male, age 80, left hemisphere 43.9
1892 Male, age 76, both hemispheres 43.3
2113 Female, age 91, right hemisphere 41.3
2437 Female, age 94, left hemisphere 40.3
1940 Female, age 85, left hemisphere 39.4
2249 Male, age 74, both hemispheres 33.8
Hippocampus, CA3
nTPM: 41.8
2137 Male, age 80, left hemisphere 45.6
2861 Female, age 67, both hemispheres 45.3
2620 Female, age 94, left hemisphere 43.9
1867 Male, age 76, both hemispheres 40.9
2436 Male, age 74, both hemispheres 37.8
1891 Female, age 85, both hemispheres 37.1
Parahippocampal cortex
nTPM: 40.6
2622 Female, age 67, right hemisphere 43.7
2532 Female, age 72, left hemisphere 43.3
2245 Female, age 91, both hemispheres 43.0
2692 Male, age 74, both hemispheres 42.1
1990 Female, age 91, right hemisphere 41.3
1850 Male, age 80, both hemispheres 40.1
1933 Female, age 85, both hemispheres 39.8
2693 Female, age 94, both hemispheres 38.7
2250 Female, age 67, right hemisphere 38.2
2018 Male, age 76, both hemispheres 35.4
Perirhinal gyrus
nTPM: 42.5
1847 Female, age 91, left hemisphere 43.3
1794 Male, age 80, right hemisphere 43.1
1841 Female, age 85, right hemisphere 42.5
2521 Female, age 94, right hemisphere 42.0
2848 Male, age 76, right hemisphere 41.5
Subiculum
nTPM: 39.0
2438 Female, age 94, left hemisphere 42.0
1977 Female, age 85, both hemispheres 41.1
2619 Male, age 74, both hemispheres 40.1
1901 Male, age 80, both hemispheres 37.8
2729 Female, age 91, right hemisphere 37.6
2042 Male, age 76, both hemispheres 35.3

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 30.2
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 30.2
Samples: 197

Max nTPM: 57.7
Min nTPM: 17.3
Std nTPM: 6.7
Median nTPM: 29.1
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 57.7
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 56.9
GTEX-X4XX-0011-R1B-SM-3P622 60-69 years, male 47.0
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 46.1
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 44.8
GTEX-P44G-0011-R1A-SM-2I3FE 30-39 years, male 44.1
GTEX-1EWIQ-0011-R1a-SM-9OSX7 70-79 years, female 43.9
GTEX-WL46-0011-R1A-SM-3LK6M 50-59 years, male 42.8
GTEX-ZF28-0011-R1a-SM-4WWD1 60-69 years, male 42.7
GTEX-1GF9W-0011-R1a-SM-9QEIQ 60-69 years, male 42.6
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 42.1
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 11.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 11.4
FF:10153-102I9 76 years, female 16.6
FF:10169-103B7 60 years, female 6.2

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 25.0
Pig sample Sample description nTPM
Subiculum
nTPM: 22.1
Samples: 4

Max nTPM: 28.2
Min nTPM: 19.7
Sample A Female 28.2
Sample B Female 20.4
Sample C Male 20.1
Sample D Male 19.7
Dorsal hippocampus
nTPM: 25.0
Samples: 4

Max nTPM: 28.7
Min nTPM: 20.0
Sample A Female 28.7
Sample B Female 25.9
Sample C Male 25.5
Sample D Male 20.0
Entorhinal cortex
nTPM: 24.3
Samples: 4

Max nTPM: 27.3
Min nTPM: 22.0
Sample A Female 23.3
Sample B Female 27.3
Sample C Male 24.7
Sample D Male 22.0
Ventral hippocampus
nTPM: 23.6
Samples: 4

Max nTPM: 28.1
Min nTPM: 18.2
Sample A Female 21.6
Sample B Female 18.2
Sample C Male 28.1
Sample D Male 26.3

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 50.1
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 46.1
Samples: 4

Max nTPM: 49.3
Min nTPM: 44.0
Sample A Male 44.8
Sample B Male 49.3
Sample C Female 46.3
Sample D Female 44.0
Hippocampal formation
nTPM: 50.1
Samples: 4

Max nTPM: 54.1
Min nTPM: 48.0
Sample A Male 54.1
Sample B Male 49.6
Sample C Female 48.6
Sample D Female 48.0

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 8.7
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 8.7
378549 Antisense, RP_040625_01_B03, Mouse strain C57BL/6J (56 days, male) 10.3
81599636 Antisense, RP_071203_03_D06, Mouse strain C57BL/6J (56 days, male) 7.1

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