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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
ASGR2 is potential prognostic, high expression is favorable in Liver Hepatocellular Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
424.0
Number of samples
362
Samples
Sample
Description
TPM
TCGA-DD-AADA-01A
0 years, female, asian, stage:Stage I, alive, 1233 days
1446.6
TCGA-2Y-A9H6-01A
0 years, female, white, stage:Stage I, alive, 357 days
1303.3
TCGA-DD-A39Z-01A
0 years, female, stage:Stage II, dead, 601 days
1231.1
TCGA-FV-A3R3-01A
0 years, female, white, stage:Stage I, dead, 366 days
1164.3
TCGA-ED-A7PY-01A
0 years, female, asian, stage:Stage II, alive, 390 days
1156.1
TCGA-DD-AADI-01A
0 years, female, asian, stage:Stage I, alive, 1085 days
1119.8
TCGA-DD-A39W-01A
0 years, female, white, stage:Stage III, dead, 827 days
1087.2
TCGA-ED-A66Y-01A
0 years, female, asian, stage:Stage IIIA, dead, 296 days
1059.0
TCGA-LG-A9QC-01A
0 years, male, white, stage:Stage I, alive, 425 days
1052.0
TCGA-2Y-A9GU-01A
0 years, female, white, stage:Stage I, alive, 1939 days
1031.8
TCGA-ED-A8O5-01A
0 years, female, asian, stage:Stage IIIA, alive, 406 days
1009.0
TCGA-2Y-A9H3-01A
0 years, male, white, stage:Stage II, alive, 1516 days
999.7
TCGA-DD-AAVZ-01A
0 years, male, asian, stage:Stage I, alive, 1900 days
997.3
TCGA-ZP-A9D0-01A
0 years, female, black or african american, stage:'--, alive, 1091 days
981.8
TCGA-ZP-A9CV-01A
0 years, male, white, stage:'--, dead, 1088 days
963.2
TCGA-5C-A9VG-01A
0 years, male, white, stage:Stage II, alive, 328 days
962.0
TCGA-EP-A12J-01A
0 years, male, black or african american, stage:Stage I, alive, 570 days
953.7
TCGA-DD-AADJ-01A
0 years, female, asian, stage:Stage I, alive, 1066 days
952.5
TCGA-EP-A26S-01A
0 years, male, white, stage:Stage I, alive, 608 days
939.4
TCGA-ES-A2HT-01A
0 years, male, black or african american, stage:Stage I, dead, 438 days
937.7
TCGA-DD-AADP-01A
0 years, male, asian, stage:Stage I, alive, 458 days
937.5
TCGA-BC-A10Q-01A
0 years, female, white, stage:'--, dead, 1135 days
930.8
TCGA-DD-AAVS-01A
0 years, male, asian, stage:Stage I, alive, 1823 days
929.0
TCGA-G3-AAV6-01A
0 years, female, white, stage:Stage IIIA, dead, 65 days
907.0
TCGA-DD-AACY-01A
0 years, male, asian, stage:Stage I, alive, 1450 days
906.1
TCGA-DD-AACN-01A
0 years, male, asian, stage:Stage I, alive, 1302 days
881.7
TCGA-2Y-A9HB-01A
0 years, male, stage:Stage I, alive, 260 days
867.9
TCGA-RC-A7S9-01A
0 years, female, asian, stage:Stage I, alive, 640 days
847.2
TCGA-DD-A73C-01A
0 years, female, white, stage:Stage IIIA, alive, 701 days
837.1
TCGA-DD-AACI-01A
0 years, male, asian, stage:Stage II, alive, 1618 days
834.5
TCGA-DD-AADO-01A
0 years, male, asian, stage:Stage I, alive, 453 days
829.8
TCGA-ED-A4XI-01A
0 years, male, asian, stage:Stage II, alive, 819 days
817.8
TCGA-G3-AAV0-01A
0 years, male, asian, stage:Stage I, alive, 476 days
814.3
TCGA-DD-A4NN-01A
0 years, female, white, stage:Stage I, dead, 899 days
807.5
TCGA-5C-A9VH-01A
0 years, male, white, stage:Stage I, alive, 322 days
800.7
TCGA-DD-A4NP-01A
0 years, male, white, stage:Stage I, alive, 3308 days
793.8
TCGA-KR-A7K2-01A
0 years, male, white, stage:Stage I, alive, 829 days
785.8
TCGA-G3-AAV2-01A
0 years, male, white, stage:Stage I, alive, 372 days
780.2
TCGA-ZP-A9CY-01A
0 years, female, white, stage:'--, alive, 782 days
775.8
TCGA-2Y-A9H7-01A
0 years, female, white, stage:Stage I, alive, 1168 days
763.6
TCGA-XR-A8TE-01A
0 years, male, white, stage:Stage IIIA, alive, 925 days
759.3
TCGA-DD-AAVY-01A
0 years, male, asian, stage:Stage IIIA, alive, 1970 days
757.1
TCGA-DD-AADY-01A
0 years, female, asian, stage:Stage I, alive, 555 days
753.7
TCGA-DD-AACK-01A
0 years, male, asian, stage:Stage I, alive, 9 days
753.4
TCGA-3K-AAZ8-01A
0 years, male, black or african american, stage:Stage IIIB, alive, 396 days
752.8
TCGA-K7-A6G5-01A
0 years, male, white, stage:Stage I, alive, 512 days
731.1
TCGA-EP-A2KB-01A
0 years, female, white, stage:Stage I, dead, 596 days
730.6
TCGA-CC-A9FW-01A
0 years, male, asian, stage:Stage IIIA, alive, 248 days
728.3
TCGA-DD-A118-01A
0 years, female, white, stage:Stage II, alive, 3437 days
719.7
TCGA-MI-A75H-01A
0 years, male, white, stage:'--, alive, 747 days
719.4
TCGA-DD-A113-01A
0 years, female, white, stage:Stage II, alive, 2425 days
713.2
TCGA-DD-A1EC-01A
0 years, female, white, stage:Stage I, alive, 602 days
709.9
TCGA-DD-A73G-01A
0 years, female, white, stage:Stage I, alive, 3478 days
708.0
TCGA-DD-AAEG-01A
0 years, female, asian, stage:Stage I, alive, 719 days
687.6
TCGA-DD-A3A4-01A
0 years, male, white, stage:Stage IIIA, dead, 612 days
684.0
TCGA-DD-A39X-01A
0 years, female, white, stage:Stage I, dead, 1694 days
678.7
TCGA-DD-AAW0-01A
0 years, male, asian, stage:Stage I, alive, 2015 days
675.0
TCGA-LG-A9QD-01A
0 years, male, white, stage:Stage IIIA, alive, 366 days
673.3
TCGA-DD-AACP-01A
0 years, male, asian, stage:Stage I, alive, 415 days
672.4
TCGA-DD-AACW-01A
0 years, male, asian, stage:Stage I, alive, 1424 days
670.9
TCGA-DD-AAE3-01A
0 years, male, asian, stage:Stage I, alive, 566 days
668.0
TCGA-ZP-A9D1-01A
0 years, female, white, stage:'--, alive, 21 days
653.6
TCGA-MI-A75C-01A
0 years, male, white, stage:Stage I, alive, 291 days
650.6
TCGA-DD-A3A1-01A
0 years, male, stage:Stage IIIA, dead, 233 days
650.5
TCGA-WX-AA47-01A
0 years, female, white, stage:Stage IIIA, dead, 556 days
646.1
TCGA-2Y-A9H5-01A
0 years, female, white, stage:Stage I, dead, 555 days
638.6
TCGA-CC-A8HV-01A
0 years, female, asian, stage:Stage II, dead, 279 days
637.1
TCGA-DD-AADM-01A
0 years, male, asian, stage:Stage II, dead, 12 days
632.0
TCGA-ED-A66X-01A
0 years, male, asian, stage:Stage IIIA, alive, 406 days
630.2
TCGA-DD-AAD2-01A
0 years, male, asian, stage:Stage I, alive, 658 days
625.5
TCGA-KR-A7K7-01A
0 years, female, white, stage:Stage II, alive, 951 days
623.8
TCGA-2Y-A9H8-01A
0 years, female, white, stage:'--, dead, 633 days
618.0
TCGA-DD-A11D-01A
0 years, female, white, stage:Stage I, dead, 1560 days
617.4
TCGA-G3-A3CG-01A
0 years, male, white, stage:Stage I, alive, 673 days
617.4
TCGA-DD-AAEH-01A
0 years, male, asian, stage:Stage I, alive, 784 days
615.9
TCGA-DD-A4ND-01A
0 years, female, white, stage:Stage I, alive, 2746 days
603.7
TCGA-DD-A3A8-01A
0 years, male, white, stage:Stage II, dead, 11 days
601.8
TCGA-ZS-A9CD-01A
0 years, male, white, stage:Stage II, dead, 1386 days
600.0
TCGA-BC-A10S-01A
0 years, male, white, stage:'--, dead, 1423 days
599.8
TCGA-DD-AACO-01A
0 years, male, asian, stage:Stage I, alive, 1876 days
594.6
TCGA-DD-AAE7-01A
0 years, male, asian, stage:Stage I, alive, 644 days
593.2
TCGA-DD-A1EF-01A
0 years, female, white, stage:Stage I, dead, 394 days
590.6
TCGA-MI-A75G-01A
0 years, male, white, stage:Stage II, alive, 698 days
586.7
TCGA-G3-A25S-01A
0 years, male, white, stage:Stage I, dead, 416 days
585.9
TCGA-CC-A7IE-01A
0 years, male, asian, stage:Stage IIIA, dead, 217 days
573.8
TCGA-EP-A2KA-01A
0 years, female, white, stage:Stage IIIA, dead, 627 days
572.2
TCGA-DD-AAED-01A
0 years, male, asian, stage:Stage I, alive, 763 days
572.1
TCGA-UB-AA0V-01A
0 years, female, white, stage:Stage I, alive, 314 days
572.0
TCGA-DD-A4NB-01A
0 years, male, white, stage:Stage I, alive, 989 days
571.9
TCGA-2Y-A9H1-01A
0 years, male, white, stage:Stage I, dead, 1229 days
565.5
TCGA-WX-AA44-01A
0 years, female, white, stage:Stage I, alive, 615 days
564.7
TCGA-DD-AADQ-01A
0 years, male, asian, stage:Stage II, alive, 436 days
564.7
TCGA-DD-A3A2-01A
0 years, female, white, stage:Stage I, dead, 2131 days
563.9
TCGA-K7-A5RF-01A
0 years, male, white, stage:Stage I, alive, 631 days
562.9
TCGA-G3-A6UC-01A
0 years, male, white, stage:Stage IIIB, alive, 671 days
558.6
TCGA-BC-A69I-01A
0 years, male, white, stage:Stage I, alive, 387 days
558.4
TCGA-BC-A10X-01A
0 years, female, white, stage:Stage IIIA, dead, 770 days
556.6
TCGA-UB-A7MA-01A
0 years, female, white, stage:Stage II, alive, 848 days
550.0
TCGA-WQ-A9G7-01A
0 years, female, white, stage:'--, alive, 30 days
540.9
TCGA-G3-A7M7-01A
0 years, male, white, stage:Stage I, alive, 361 days
536.0
TCGA-DD-AADS-01A
0 years, male, asian, stage:Stage I, alive, 474 days
534.2
TCGA-G3-A3CK-01A
0 years, male, asian, stage:Stage I, alive, 585 days
531.9
TCGA-RC-A7SK-01A
0 years, male, asian, stage:Stage I, alive, 472 days
531.1
TCGA-BC-A10R-01A
0 years, female, white, stage:'--, dead, 308 days
526.0
TCGA-BC-A216-01A
0 years, female, white, stage:Stage IIIA, alive, 1351 days
524.6
TCGA-DD-A4NV-01A
0 years, male, white, stage:Stage IIIA, alive, 2398 days
522.4
TCGA-CC-A8HS-01A
0 years, male, asian, stage:Stage IIIC, dead, 300 days
521.7
TCGA-DD-A4NR-01A
0 years, female, white, stage:Stage I, dead, 9 days
519.9
TCGA-UB-A7MF-01A
0 years, male, white, stage:Stage IIIA, dead, 214 days
519.1
TCGA-BD-A3ER-01A
0 years, male, white, stage:Stage II, alive, 1115 days
518.7
TCGA-DD-AAVP-01A
0 years, male, asian, stage:Stage I, alive, 2752 days
517.8
TCGA-FV-A2QR-01A
0 years, male, white, stage:Stage I, dead, 581 days
516.7
TCGA-BC-A10W-01A
0 years, male, asian, stage:'--, dead, 91 days
515.7
TCGA-DD-A73E-01A
0 years, male, white, stage:Stage I, alive, 44 days
515.0
TCGA-XR-A8TF-01A
0 years, male, white, stage:Stage I, dead, 693 days
514.6
TCGA-G3-A25Y-01A
0 years, female, asian, stage:Stage I, dead, 452 days
508.6
TCGA-WX-AA46-01A
0 years, male, white, stage:Stage II, alive, 756 days
507.2
TCGA-DD-A11B-01A
0 years, male, white, stage:Stage I, dead, 14 days
505.7
TCGA-WQ-AB4B-01A
0 years, male, white, stage:Stage II, alive, 395 days
503.3
TCGA-ZS-A9CG-01A
0 years, male, white, stage:Stage II, alive, 341 days
502.8
TCGA-FV-A2QQ-01A
0 years, male, white, stage:Stage I, alive, 729 days
500.9
TCGA-LG-A6GG-01A
0 years, female, white, stage:Stage II, alive, 387 days
499.6
TCGA-DD-AAE1-01A
0 years, male, asian, stage:Stage I, alive, 552 days
487.9
TCGA-CC-5259-01A
0 years, female, asian, stage:Stage IIIC, alive, 250 days
487.2
TCGA-DD-AAVX-01A
0 years, male, asian, stage:Stage II, alive, 1718 days
483.3
TCGA-DD-AAE9-01A
0 years, male, asian, stage:Stage I, alive, 722 days
480.1
TCGA-CC-A3MB-01A
0 years, male, asian, stage:Stage IIIA, dead, 315 days
474.8
TCGA-ZP-A9CZ-01A
0 years, male, asian, stage:'--, alive, 706 days
473.6
TCGA-KR-A7K8-01A
0 years, male, stage:Stage I, alive, 906 days
472.0
TCGA-DD-AADU-01A
0 years, male, asian, stage:Stage II, alive, 554 days
471.4
TCGA-RC-A6M5-01A
0 years, female, white, stage:Stage IVA, alive, 15 days
470.9
TCGA-G3-A7M8-01A
0 years, male, asian, stage:Stage I, alive, 430 days
470.1
TCGA-HP-A5N0-01A
0 years, female, stage:'--, dead, 752 days
469.3
TCGA-CC-A7IH-01A
0 years, male, asian, stage:Stage IIIA, alive, 365 days
467.7
TCGA-BC-A3KG-01A
0 years, female, white, stage:Stage II, alive, 680 days
467.5
TCGA-DD-AAC9-01A
0 years, male, asian, stage:Stage I, alive, 347 days
466.3
TCGA-2Y-A9GY-01A
0 years, female, white, stage:Stage II, dead, 757 days
452.0
TCGA-DD-AACS-01A
0 years, male, asian, stage:Stage I, alive, 1804 days
450.8
TCGA-DD-AAW2-01A
0 years, male, asian, stage:Stage I, alive, 1855 days
444.4
TCGA-G3-A5SI-01A
0 years, male, asian, stage:Stage II, dead, 768 days
444.2
TCGA-DD-A4NL-01A
0 years, male, white, stage:Stage I, alive, 1711 days
441.8
TCGA-RC-A6M6-01A
0 years, male, white, stage:Stage II, alive, 9 days
441.5
TCGA-DD-AAW3-01A
0 years, male, asian, stage:Stage I, alive, 1633 days
435.8
TCGA-DD-AACU-01A
0 years, male, asian, stage:Stage I, alive, 1567 days
435.8
TCGA-ED-A627-01A
0 years, male, white, stage:Stage I, alive, 423 days
433.5
TCGA-DD-A1ED-01A
0 years, male, white, stage:Stage I, alive, 2301 days
427.3
TCGA-DD-A4NE-01A
0 years, female, white, stage:Stage IIIA, dead, 660 days
424.3
TCGA-DD-AADN-01A
0 years, male, asian, stage:Stage I, alive, 898 days
422.7
TCGA-G3-AAV3-01A
0 years, female, white, stage:Stage II, alive, 412 days
419.8
TCGA-DD-AAD5-01A
0 years, male, asian, stage:Stage I, alive, 1345 days
419.3
TCGA-MR-A520-01A
0 years, male, white, stage:Stage I, alive, 229 days
418.8
TCGA-DD-A73F-01A
0 years, female, white, stage:Stage I, alive, 1085 days
418.6
TCGA-DD-AACT-01A
0 years, female, asian, stage:Stage I, alive, 1562 days
417.1
TCGA-DD-A1EJ-01A
0 years, female, white, stage:Stage IIIC, dead, 1005 days
417.0
TCGA-DD-AAVQ-01A
0 years, male, asian, stage:Stage I, alive, 2728 days
411.1
TCGA-DD-A1EH-01A
0 years, male, white, stage:Stage III, alive, 1495 days
410.9
TCGA-DD-A4NF-01A
0 years, male, white, stage:Stage I, alive, 942 days
410.2
TCGA-G3-A3CI-01A
0 years, male, white, stage:Stage I, alive, 180 days
405.8
TCGA-HP-A5MZ-01A
0 years, male, stage:Stage I, dead, 91 days
405.3
TCGA-G3-A7M5-01A
0 years, male, asian, stage:Stage I, alive, 447 days
403.8
TCGA-DD-AAD1-01A
0 years, female, asian, stage:Stage I, alive, 564 days
403.6
TCGA-DD-A4NK-01A
0 years, female, white, stage:Stage IIIA, dead, 1210 days
400.9
TCGA-2Y-A9GX-01A
0 years, male, white, stage:Stage I, alive, 2442 days
399.8
TCGA-DD-A1EE-01A
0 years, male, white, stage:Stage IIIA, dead, 349 days
393.8
TCGA-DD-A4NH-01A
0 years, female, white, stage:Stage IIIB, alive, 917 days
389.0
TCGA-DD-AAE4-01A
0 years, female, asian, stage:Stage I, alive, 608 days
386.5
TCGA-ED-A5KG-01A
0 years, female, asian, stage:Stage II, alive, 854 days
384.1
TCGA-BD-A2L6-01A
0 years, male, white, stage:'--, alive, 1363 days
379.5
TCGA-RC-A7SF-01A
0 years, male, asian, stage:Stage I, alive, 579 days
376.8
TCGA-2Y-A9GS-01A
0 years, male, white, stage:'--, dead, 724 days
375.7
TCGA-RC-A7SH-01A
0 years, male, asian, stage:Stage II, alive, 468 days
372.8
TCGA-DD-A3A9-01A
0 years, female, white, stage:Stage IVB, dead, 931 days
369.8
TCGA-ED-A7XP-01A
0 years, female, asian, stage:Stage II, alive, 400 days
369.8
TCGA-DD-A4NI-01A
0 years, male, white, stage:Stage II, alive, 816 days
369.6
TCGA-EP-A3JL-01A
0 years, male, white, stage:Stage I, alive, 303 days
369.0
TCGA-DD-A4NS-01A
0 years, female, white, stage:Stage I, dead, 2456 days
368.9
TCGA-DD-A1EB-01A
0 years, female, stage:Stage I, alive, 2017 days
368.0
TCGA-FV-A495-01A
0 years, female, white, stage:Stage II, alive, 1 days
366.5
TCGA-DD-AACD-01A
0 years, male, asian, stage:Stage I, dead, 381 days
366.2
TCGA-DD-AADB-01A
0 years, male, asian, stage:Stage I, alive, 1242 days
366.2
TCGA-GJ-A9DB-01A
0 years, male, white, stage:Stage I, dead, 67 days
365.8
TCGA-DD-AACZ-01A
0 years, female, asian, stage:Stage I, dead, 171 days
362.8
TCGA-DD-AAVW-01A
0 years, male, asian, stage:Stage I, alive, 2317 days
360.7
TCGA-CC-A5UE-01A
0 years, male, asian, stage:Stage IIIB, dead, 272 days
360.3
TCGA-DD-AADK-01A
0 years, female, asian, stage:Stage II, alive, 1049 days
358.7
TCGA-DD-AACC-01A
0 years, male, asian, stage:Stage I, dead, 1685 days
357.4
TCGA-DD-AACF-01A
0 years, male, asian, stage:Stage I, dead, 365 days
355.7
TCGA-DD-A39V-01A
0 years, male, white, stage:Stage II, dead, 643 days
355.5
TCGA-CC-A5UC-01A
0 years, male, asian, stage:Stage IIIA, dead, 347 days
353.6
TCGA-UB-A7ME-01A
0 years, male, asian, stage:Stage I, alive, 486 days
352.7
TCGA-T1-A6J8-01A
0 years, male, white, stage:'--, alive, 23 days
351.3
TCGA-DD-AAVR-01A
0 years, male, asian, stage:Stage I, alive, 2513 days
351.3
TCGA-DD-AAD3-01A
0 years, male, asian, stage:Stage I, alive, 1295 days
351.0
TCGA-CC-5261-01A
0 years, male, asian, stage:Stage II, dead, 97 days
349.2
TCGA-DD-AAW1-01A
0 years, male, asian, stage:Stage IIIA, alive, 1989 days
347.7
TCGA-BC-A110-01A
0 years, female, black or african american, stage:'--, dead, 2116 days
347.1
TCGA-2Y-A9GW-01A
0 years, male, white, stage:Stage I, dead, 1271 days
344.3
TCGA-DD-AACV-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
341.6
TCGA-FV-A4ZQ-01A
0 years, male, white, stage:Stage I, alive, 12 days
339.5
TCGA-G3-AAV5-01A
0 years, male, white, stage:Stage II, alive, 354 days
337.4
TCGA-ZS-A9CE-01A
0 years, female, white, stage:Stage II, alive, 1241 days
333.6
TCGA-DD-A115-01A
0 years, male, white, stage:Stage IIIA, dead, 2542 days
333.0
TCGA-DD-AAD8-01A
0 years, female, asian, stage:Stage I, alive, 1219 days
332.8
TCGA-CC-A7IG-01A
0 years, male, asian, stage:Stage II, dead, 299 days
331.2
TCGA-G3-A3CJ-01A
0 years, male, american indian or alaska native, stage:Stage II, alive, 594 days
330.6
TCGA-ES-A2HS-01A
0 years, male, white, stage:Stage I, dead, 688 days
327.3
TCGA-FV-A3I1-01A
0 years, female, white, stage:Stage II, dead, 247 days
326.9
TCGA-BC-A217-01A
0 years, female, white, stage:Stage II, dead, 1397 days
326.8
TCGA-BC-A8YO-01A
0 years, female, white, stage:Stage IIIC, alive, 562 days
326.8
TCGA-G3-A3CH-01A
0 years, male, asian, stage:Stage IIIA, alive, 780 days
326.2
TCGA-DD-A3A5-01A
0 years, female, white, stage:Stage III, dead, 3125 days
325.6
TCGA-CC-A9FS-01A
0 years, male, asian, stage:Stage II, alive, 211 days
324.0
TCGA-EP-A3RK-01A
0 years, male, white, stage:Stage IIIA, alive, 363 days
322.3
TCGA-DD-AAD0-01A
0 years, female, asian, stage:Stage I, alive, 137 days
321.9
TCGA-DD-AAEK-01A
0 years, male, asian, stage:Stage II, alive, 1067 days
320.8
TCGA-XR-A8TC-01A
0 years, female, white, stage:Stage I, alive, 1339 days
320.8
TCGA-ED-A7XO-01A
0 years, male, asian, stage:Stage IIIA, alive, 427 days
319.9
TCGA-UB-A7MB-01A
0 years, male, white, stage:Stage II, alive, 601 days
319.2
TCGA-DD-AADW-01A
0 years, male, asian, stage:Stage I, alive, 587 days
313.5
TCGA-DD-A1EI-01A
0 years, male, asian, stage:Stage I, alive, 183 days
312.5
TCGA-FV-A23B-01A
0 years, female, white, stage:Stage II, dead, 1852 days
310.8
TCGA-DD-AAVU-01A
0 years, male, asian, stage:Stage II, alive, 2202 days
307.9
TCGA-DD-A73A-01A
0 years, male, white, stage:Stage I, alive, 728 days
306.5
TCGA-5R-AA1D-01A
0 years, female, white, stage:Stage IIIA, alive, 449 days
305.5
TCGA-GJ-A6C0-01A
0 years, female, white, stage:Stage II, dead, 31 days
304.8
TCGA-DD-A11C-01A
0 years, male, white, stage:Stage I, alive, 662 days
304.3
TCGA-DD-AADF-01A
0 years, female, asian, stage:Stage I, dead, 115 days
303.4
TCGA-DD-A3A7-01A
0 years, male, stage:Stage IIIB, dead, 419 days
299.4
TCGA-BC-A10T-01A
0 years, male, white, stage:'--, dead, 837 days
298.6
TCGA-ZS-A9CF-01A
0 years, male, white, stage:Stage II, alive, 2412 days
296.7
TCGA-G3-AAV4-01A
0 years, female, white, stage:Stage I, dead, 27 days
292.3
TCGA-DD-AACB-01A
0 years, female, asian, stage:Stage I, alive, 2324 days
292.2
TCGA-5R-AAAM-01A
0 years, female, white, stage:Stage II, dead, 46 days
289.5
TCGA-2Y-A9GT-01A
0 years, male, white, stage:Stage I, dead, 1624 days
288.5
TCGA-DD-A1EK-01A
0 years, female, white, stage:Stage IVB, dead, 558 days
286.8
TCGA-DD-A39Y-01A
0 years, male, asian, stage:Stage I, dead, 171 days
285.8
TCGA-CC-A123-01A
0 years, female, asian, stage:Stage IIIA, alive, 219 days
285.7
TCGA-2Y-A9H9-01A
0 years, male, white, stage:Stage I, alive, 697 days
284.8
TCGA-ED-A8O6-01A
0 years, female, asian, stage:Stage IIIA, dead, 56 days
283.6
TCGA-XR-A8TG-01A
0 years, male, white, stage:Stage I, alive, 898 days
280.5
TCGA-DD-AAEI-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
279.5
TCGA-DD-AADR-01A
0 years, male, asian, stage:Stage I, alive, 2028 days
277.4
TCGA-DD-A1EG-01A
0 years, male, white, stage:Stage I, dead, 1372 days
276.6
TCGA-MI-A75E-01A
0 years, male, white, stage:Stage IIIC, alive, 507 days
275.2
TCGA-G3-A25X-01A
0 years, male, asian, stage:Stage II, alive, 1779 days
274.5
TCGA-DD-A119-01A
0 years, male, asian, stage:Stage IV, dead, 223 days
273.5
TCGA-FV-A4ZP-01A
0 years, male, white, stage:Stage IIIA, dead, 2486 days
273.3
TCGA-5R-AA1C-01A
0 years, male, white, stage:Stage II, alive, 520 days
271.3
TCGA-BC-A69H-01A
0 years, male, white, stage:Stage II, alive, 444 days
269.5
TCGA-PD-A5DF-01A
0 years, female, white, stage:Stage IIIB, dead, 639 days
268.4
TCGA-UB-AA0U-01A
0 years, male, white, stage:Stage II, alive, 327 days
265.9
TCGA-BD-A3EP-01A
0 years, female, black or african american, stage:Stage I, alive, 409 days
265.0
TCGA-DD-AAE0-01A
0 years, female, asian, stage:Stage IIIA, alive, 555 days
261.3
TCGA-O8-A75V-01A
0 years, male, stage:Stage I, alive, 538 days
258.8
TCGA-CC-A8HU-01A
0 years, female, asian, stage:Stage IIIA, dead, 344 days
256.8
TCGA-DD-AAC8-01A
0 years, male, asian, stage:Stage I, dead, 16 days
255.7
TCGA-DD-AADD-01A
0 years, male, asian, stage:Stage I, alive, 1231 days
254.7
TCGA-DD-A116-01A
0 years, male, asian, stage:Stage IIIA, dead, 1622 days
254.5
TCGA-BC-A10U-01A
0 years, male, white, stage:'--, dead, 837 days
253.9
TCGA-BC-A10Z-01A
0 years, female, white, stage:Stage I, dead, 34 days
253.9
TCGA-G3-AAUZ-01A
0 years, male, stage:Stage I, alive, 480 days
253.9
TCGA-DD-AACL-01A
0 years, female, asian, stage:Stage I, dead, 107 days
253.6
TCGA-G3-A25V-01A
0 years, male, white, stage:Stage I, alive, 860 days
253.5
TCGA-DD-AAEB-01A
0 years, male, asian, stage:Stage I, alive, 478 days
251.1
TCGA-G3-A5SL-01A
0 years, male, white, stage:Stage II, alive, 621 days
251.1
TCGA-NI-A4U2-01A
0 years, male, white, stage:Stage IIIA, dead, 1791 days
247.3
TCGA-DD-AACQ-01A
0 years, male, asian, stage:Stage II, dead, 432 days
246.9
TCGA-WJ-A86L-01A
0 years, female, white, stage:Stage I, alive, 345 days
242.3
TCGA-BC-A5W4-01A
0 years, male, white, stage:Stage IIIA, dead, 547 days
239.9
TCGA-BC-A10Y-01A
0 years, male, white, stage:'--, dead, 711 days
239.7
TCGA-DD-AAVV-01A
0 years, male, asian, stage:Stage II, alive, 2455 days
236.4
TCGA-DD-AACH-01A
0 years, male, asian, stage:Stage II, dead, 195 days
236.4
TCGA-DD-A4NJ-01A
0 years, female, white, stage:Stage II, alive, 928 days
233.9
TCGA-CC-A3MC-01A
0 years, male, asian, stage:Stage IIIA, alive, 363 days
232.4
TCGA-DD-AADC-01A
0 years, male, asian, stage:Stage I, dead, 425 days
230.3
TCGA-G3-A5SK-01A
0 years, male, white, stage:Stage I, alive, 744 days
226.2
TCGA-CC-A7IL-01A
0 years, male, asian, stage:Stage IIIA, dead, 278 days
226.2
TCGA-DD-A3A3-01A
0 years, male, asian, stage:Stage I, dead, 535 days
225.3
TCGA-DD-A4NG-01A
0 years, male, white, stage:Stage IIIA, dead, 802 days
222.9
TCGA-RC-A6M4-01A
0 years, female, white, stage:Stage IIIA, alive, 22 days
222.8
TCGA-ZP-A9D4-01A
0 years, female, white, stage:'--, alive, 395 days
221.6
TCGA-KR-A7K0-01A
0 years, male, white, stage:Stage I, dead, 65 days
221.2
TCGA-2Y-A9GZ-01A
0 years, female, white, stage:Stage II, dead, 848 days
221.2
TCGA-CC-5262-01A
0 years, male, asian, stage:Stage IIIC, dead, 103 days
218.2
TCGA-RC-A7SB-01A
0 years, male, asian, stage:Stage II, alive, 588 days
217.8
TCGA-2Y-A9GV-01A
0 years, female, white, stage:Stage I, dead, 2532 days
217.2
TCGA-DD-AACX-01A
0 years, male, asian, stage:Stage II, alive, 170 days
216.9
TCGA-CC-5264-01A
0 years, male, asian, stage:Stage IIIA, dead, 102 days
214.0
TCGA-DD-A73B-01A
0 years, female, white, stage:Stage I, dead, 283 days
210.4
TCGA-DD-A4NQ-01A
0 years, male, white, stage:Stage II, dead, 373 days
209.2
TCGA-DD-A4NO-01A
0 years, male, white, stage:Stage I, alive, 2245 days
206.2
TCGA-DD-AAE6-01A
0 years, female, asian, stage:Stage I, alive, 141 days
205.9
TCGA-G3-A7M9-01A
0 years, male, white, stage:Stage IIIB, dead, 56 days
205.4
TCGA-CC-5263-01A
0 years, male, asian, stage:Stage IIIA, dead, 129 days
203.3
TCGA-CC-5258-01A
0 years, male, asian, stage:Stage II, dead, 129 days
200.4
TCGA-ED-A7PX-01A
0 years, female, asian, stage:Stage II, alive, 6 days
199.9
TCGA-DD-AADV-01A
0 years, male, asian, stage:Stage I, alive, 574 days
199.5
TCGA-G3-AAV7-01A
0 years, male, asian, stage:Stage II, alive, 361 days
197.4
TCGA-2Y-A9HA-01A
0 years, male, white, stage:Stage II, dead, 36 days
197.1
TCGA-G3-AAV1-01A
0 years, male, asian, stage:Stage IIIC, dead, 359 days
196.6
TCGA-CC-A5UD-01A
0 years, male, asian, stage:Stage IIIA, dead, 304 days
195.7
TCGA-2Y-A9H4-01A
0 years, male, black or african american, stage:Stage I, alive, 1452 days
195.0
TCGA-G3-A25Z-01A
0 years, male, asian, stage:Stage I, alive, 655 days
194.4
TCGA-DD-AADL-01A
0 years, male, asian, stage:Stage I, alive, 636 days
194.2
TCGA-MI-A75I-01A
0 years, male, black or african american, stage:'--, alive, 630 days
191.6
TCGA-4R-AA8I-01A
0 years, male, white, stage:Stage II, dead, 262 days
189.4
TCGA-DD-AACJ-01A
0 years, male, asian, stage:Stage II, alive, 2102 days
186.8
TCGA-G3-A25U-01A
0 years, female, asian, stage:Stage I, alive, 1636 days
185.9
TCGA-G3-A5SM-01A
0 years, male, white, stage:Stage II, alive, 520 days
185.5
TCGA-DD-AAEE-01A
0 years, male, asian, stage:Stage I, alive, 810 days
185.0
TCGA-BW-A5NO-01A
0 years, male, black or african american, stage:Stage IIIA, alive, 20 days
184.8
TCGA-DD-A1EA-01A
0 years, male, asian, stage:Stage II, alive, 2415 days
184.2
TCGA-NI-A8LF-01A
0 years, male, white, stage:Stage I, alive, 799 days
180.3
TCGA-FV-A3R2-01A
0 years, male, white, stage:Stage I, dead, 194 days
176.1
TCGA-K7-AAU7-01A
0 years, male, white, stage:Stage II, alive, 359 days
174.6
TCGA-UB-A7MC-01A
0 years, male, white, stage:Stage IIIA, alive, 500 days
174.0
TCGA-EP-A2KC-01A
0 years, male, black or african american, stage:Stage I, dead, 19 days
173.8
TCGA-MR-A8JO-01A
0 years, male, white, stage:Stage I, alive, 330 days
168.6
TCGA-FV-A496-01A
0 years, female, white, stage:Stage I, alive, 10 days
167.7
TCGA-DD-AADG-01A
0 years, male, asian, stage:Stage IIIA, alive, 1145 days
166.1
TCGA-UB-A7MD-01A
0 years, male, black or african american, stage:Stage I, dead, 52 days
163.3
TCGA-CC-A8HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 140 days
162.4
TCGA-DD-AAD6-01A
0 years, male, asian, stage:Stage IIIA, alive, 672 days
157.1
TCGA-DD-AAEA-01A
0 years, male, asian, stage:Stage I, alive, 575 days
153.8
TCGA-ED-A97K-01A
0 years, male, asian, stage:Stage IIIA, alive, 6 days
148.8
TCGA-BC-A112-01A
0 years, male, white, stage:'--, dead, 153 days
146.8
TCGA-2Y-A9H0-01A
0 years, male, white, stage:Stage IIIA, alive, 3675 days
145.6
TCGA-K7-A5RG-01A
0 years, male, black or african american, stage:Stage I, alive, 519 days
144.1
TCGA-ED-A459-01A
0 years, male, asian, stage:Stage II, alive, 910 days
143.9
TCGA-DD-AACA-01A
0 years, male, asian, stage:Stage I, alive, 2301 days
143.8
TCGA-BC-A3KF-01A
0 years, female, white, stage:Stage I, alive, 8 days
142.0
TCGA-DD-AACG-01A
0 years, male, asian, stage:Stage II, dead, 469 days
138.6
TCGA-G3-A7M6-01A
0 years, female, white, stage:Stage I, alive, 632 days
138.1
TCGA-ZP-A9D2-01A
0 years, male, white, stage:'--, dead, 765 days
136.7
TCGA-CC-A7IK-01A
0 years, male, asian, stage:Stage IIIA, dead, 262 days
134.9
TCGA-DD-A73D-01A
0 years, female, white, stage:Stage II, alive, 693 days
133.3
TCGA-XR-A8TD-01A
0 years, female, white, stage:Stage IIIB, alive, 1030 days
131.9
TCGA-GJ-A3OU-01A
0 years, male, white, stage:Stage I, alive, 879 days
123.3
TCGA-CC-A7IF-01A
0 years, male, asian, stage:Stage IIIA, dead, 649 days
122.8
TCGA-5C-AAPD-01A
0 years, male, asian, stage:Stage II, alive, 20 days
118.7
TCGA-G3-A5SJ-01A
0 years, male, white, stage:Stage I, alive, 698 days
113.9
TCGA-FV-A3I0-01A
0 years, female, white, stage:Stage II, alive, 848 days
111.0
TCGA-ED-A7PZ-01A
0 years, male, asian, stage:Stage II, alive, 6 days
110.3
TCGA-DD-AAE2-01A
0 years, male, asian, stage:Stage I, alive, 638 days
107.8
TCGA-QA-A7B7-01A
0 years, male, black or african american, stage:Stage II, alive, 94 days
93.8
TCGA-G3-A25T-01A
0 years, female, white, stage:Stage IIIA, alive, 1553 days
93.2
TCGA-DD-AACE-01A
0 years, male, asian, stage:Stage I, alive, 2184 days
92.5
TCGA-DD-A1EL-01A
0 years, male, black or african american, stage:Stage II, dead, 415 days
81.7
TCGA-DD-A114-01A
0 years, male, black or african american, stage:Stage II, dead, 1149 days
78.9
TCGA-RG-A7D4-01A
0 years, male, black or african american, stage:Stage II, alive, 1098 days
78.8
TCGA-CC-A1HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 101 days
62.8
TCGA-CC-A3MA-01A
0 years, male, asian, stage:Stage IIIA, dead, 303 days
45.8
TCGA-2Y-A9H2-01A
0 years, female, white, stage:Stage I, alive, 1731 days
44.2
TCGA-YA-A8S7-01A
0 years, male, white, stage:Stage IIIA, dead, 412 days
30.4
TCGA-DD-AA3A-01A
0 years, female, white, stage:Stage I, dead, 410 days
19.7
TCGA-DD-A4NA-01A
0 years, female, white, stage:Stage IIIC, alive, 1008 days
8.4
TCGA-CC-5260-01A
0 years, female, asian, stage:Stage IIIC, dead, 87 days
4.2
TCGA-CC-A7II-01A
0 years, male, asian, stage:Stage IIIA, alive, 399 days
3.2
TCGA-CC-A3M9-01A
0 years, male, asian, stage:Stage IIIA, dead, 300 days
2.0
TCGA-CC-A7IJ-01A
0 years, male, asian, stage:Stage II, alive, 382 days
1.7
TCGA-ED-A82E-01A
0 years, female, asian, stage:Stage IIIA, alive, 408 days
1.5
TCGA-DD-A3A6-01A
0 years, female, white, stage:Stage II, dead, 3258 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
ASGR2 is not prognostic in Liver Hepatocellular Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
335.8
Number of samples
231
Samples
Sample
Description
TPM
DO50839
0 years, female, NA, stage:3, alive, 330 days
1181.1
DO45107
0 years, female, NA, stage:2, alive, 1710 days
1053.2
DO45101
0 years, male, NA, stage:2, alive, 1680 days
998.2
DO45183
0 years, female, NA, stage:2, dead, 570 days
991.5
DO50811
0 years, male, NA, stage:1, alive, 450 days
979.1
DO50845
0 years, male, NA, stage:3, alive, 210 days
873.5
DO45094
0 years, male, NA, stage:3, alive, 1650 days
863.7
DO23516
0 years, male, NA, stage:3, dead, 20 days
853.8
DO45096
0 years, male, NA, stage:2, dead, 1290 days
814.4
DO45179
0 years, female, NA, stage:2, alive, 600 days
814.4
DO45097
0 years, male, NA, stage:3, alive, 1620 days
807.0
DO45129
0 years, male, NA, stage:3, alive, 1470 days
803.0
DO45121
0 years, male, NA, stage:3, alive, 1530 days
797.4
DO45159
0 years, male, NA, stage:3, alive, 1470 days
773.7
DO48737
0 years, male, NA, stage:1, alive, 720 days
748.2
DO50825
0 years, male, NA, stage:2, alive, 390 days
732.8
DO48674
0 years, male, NA, stage:2, alive, 1260 days
716.4
DO45257
0 years, male, NA, stage:3, alive, 810 days
700.5
DO23544
0 years, male, NA, stage:2, alive, 960 days
697.5
DO45167
0 years, male, NA, stage:2, dead, 1440 days
688.0
DO48736
0 years, female, NA, stage:1, alive, 600 days
686.0
DO23528
0 years, female, NA, stage:2, alive, 1020 days
662.7
DO48719
0 years, male, NA, stage:2, alive, 690 days
656.1
DO45247
0 years, female, NA, stage:2, alive, 210 days
641.0
DO50844
0 years, male, NA, stage:4, alive, 300 days
625.7
DO45095
0 years, male, NA, stage:2, alive, 1620 days
620.7
DO227801
0 years, female, NA, stage:1, alive, 660 days
618.0
DO45241
0 years, male, NA, stage:1, alive, 1080 days
611.8
DO50857
0 years, male, NA, stage:2, alive, 210 days
604.3
DO50783
0 years, male, NA, stage:3, alive, 480 days
595.2
DO50776
0 years, male, NA, stage:1, alive, 690 days
583.9
DO45203
0 years, female, NA, stage:2, alive, 1170 days
582.1
DO23548
0 years, female, NA, stage:1, alive, 840 days
580.0
DO45289
0 years, female, NA, stage:3, alive, 360 days
579.1
DO23508
0 years, female, NA, stage:2, alive, 390 days
571.2
DO45199
0 years, female, NA, stage:2, alive, 1350 days
563.0
DO50805
0 years, male, NA, stage:2, alive, 690 days
562.8
DO23529
0 years, male, NA, stage:4, alive, 930 days
562.5
DO45209
0 years, male, NA, stage:4, alive, 1350 days
560.2
DO50804
0 years, male, NA, stage:2, alive, 720 days
550.6
DO48695
0 years, male, NA, stage:2, alive, 720 days
549.9
DO45191
0 years, female, NA, stage:2, alive, 1200 days
546.2
DO23527
0 years, male, NA, stage:1, alive, 1050 days
532.8
DO45215
0 years, male, NA, stage:2, alive, 1170 days
531.6
DO45099
0 years, male, NA, stage:3, alive, 1590 days
528.7
DO50818
0 years, male, NA, stage:2, alive, 510 days
524.2
DO50817
0 years, male, NA, stage:2, alive, 390 days
519.5
DO45195
0 years, male, NA, stage:1, alive, 390 days
510.1
DO45259
0 years, male, NA, stage:3, alive, 330 days
507.7
DO45103
0 years, male, NA, stage:3, alive, 450 days
505.2
DO48760
0 years, female, NA, stage:2, alive, 690 days
486.1
DO50793
0 years, male, NA, stage:4, alive, 540 days
484.9
DO45261
0 years, male, NA, stage:3, alive, 990 days
482.9
DO227643
0 years, male, NA, stage:2, alive, 1260 days
472.9
DO45109
0 years, male, NA, stage:2, alive, 1590 days
462.2
DO45105
0 years, male, NA, stage:1, alive, 1680 days
453.5
DO23531
0 years, female, NA, stage:3, alive, 900 days
452.3
DO50815
0 years, male, NA, stage:3, alive, 150 days
448.7
DO50816
0 years, male, NA, stage:2, alive, 390 days
447.0
DO23551
0 years, male, NA, stage:3, dead, 150 days
443.4
DO23517
0 years, male, NA, stage:2, alive, 1200 days
440.1
DO48677
0 years, male, NA, stage:3, alive, 1140 days
437.5
DO45181
0 years, female, NA, stage:2, alive, 1200 days
434.1
DO45145
0 years, male, NA, stage:3, dead, 60 days
431.3
DO45125
0 years, male, NA, stage:3, alive, 1680 days
431.0
DO48733
0 years, male, NA, stage:2, alive, 600 days
426.4
DO50814
0 years, male, NA, stage:3, alive, 420 days
421.0
DO45141
0 years, male, NA, stage:2, alive, 1320 days
420.1
DO48742
0 years, male, NA, stage:2, alive, 600 days
418.9
DO50813
0 years, male, NA, stage:2, alive, 420 days
418.1
DO23538
0 years, male, NA, stage:2, alive, 450 days
415.4
DO23514
0 years, male, NA, stage:2, alive, 1290 days
415.1
DO45177
0 years, female, NA, stage:3, alive, 1260 days
408.8
DO48761
0 years, male, NA, stage:2, alive, 870 days
402.1
DO48717
0 years, male, NA, stage:4, dead, 180 days
398.6
DO48700
0 years, female, NA, stage:2, alive, 810 days
398.5
DO50822
0 years, male, NA, stage:2, alive, 510 days
394.2
DO50802
0 years, male, NA, stage:2, alive, 930 days
394.2
DO48697
0 years, female, NA, stage:2, dead, 810 days
383.2
DO23525
0 years, male, NA, stage:4, alive, 1050 days
382.2
DO23515
0 years, male, NA, stage:2, alive, 1230 days
376.1
DO23512
0 years, male, NA, stage:1, alive, 1260 days
369.9
DO45187
0 years, female, NA, stage:1, alive, 1260 days
360.8
DO45265
0 years, male, NA, stage:3, alive, 1020 days
358.7
DO23541
0 years, male, NA, stage:2, alive, 930 days
354.7
DO50785
0 years, male, NA, stage:4, dead, 90 days
353.6
DO23518
0 years, male, NA, stage:2, alive, 1320 days
346.1
DO48693
0 years, male, NA, stage:2, alive, 900 days
342.7
DO50806
0 years, male, NA, stage:4, alive, 540 days
339.1
DO50855
0 years, male, NA, stage:2, alive, 570 days
337.4
DO50800
0 years, male, NA, stage:2, alive, 510 days
334.3
DO45229
0 years, male, NA, stage:1, alive, 990 days
332.9
DO50859
0 years, male, NA, stage:2, alive, 180 days
332.6
DO48682
0 years, female, NA, stage:3, dead, 120 days
332.0
DO50789
0 years, female, NA, stage:2, alive, 570 days
330.3
DO45231
0 years, male, NA, stage:2, alive, 930 days
328.4
DO45255
0 years, male, NA, stage:3, alive, 720 days
321.9
DO45137
0 years, male, NA, stage:1, alive, 1320 days
321.7
DO48759
0 years, male, NA, stage:3, alive, 720 days
316.8
DO45115
0 years, male, NA, stage:2, alive, 840 days
315.4
DO23511
0 years, female, NA, stage:3, dead, 180 days
313.9
DO48723
0 years, male, NA, stage:1, alive, 600 days
311.1
DO23532
0 years, female, NA, stage:1, alive, 960 days
310.5
DO45243
0 years, female, NA, stage:3, alive, 930 days
310.3
DO45273
0 years, male, NA, stage:2, alive, 480 days
310.1
DO45092
0 years, male, NA, stage:4, dead, 1200 days
309.7
DO48751
0 years, male, NA, stage:2, dead, 480 days
306.3
DO45263
0 years, male, NA, stage:3, dead, 270 days
303.8
DO23546
0 years, male, NA, stage:2, alive, 1050 days
303.6
DO50820
0 years, female, NA, stage:3, alive, 510 days
301.8
DO50850
0 years, male, NA, stage:3, alive, 720 days
299.3
DO48701
0 years, male, NA, stage:2, alive, 780 days
295.1
DO23542
0 years, male, NA, stage:3, alive, 960 days
292.4
DO23550
0 years, male, NA, stage:1, alive, 990 days
291.0
DO45233
0 years, male, NA, stage:3, alive, 900 days
290.4
DO45193
0 years, female, NA, stage:4, dead, 120 days
289.0
DO23539
0 years, male, NA, stage:1, alive, 1110 days
286.8
DO23536
0 years, male, NA, stage:2, alive, 930 days
276.1
DO23545
0 years, male, NA, stage:2, dead, 570 days
274.9
DO48725
0 years, male, NA, stage:1, alive, 780 days
272.9
DO45213
0 years, male, NA, stage:1, alive, 1200 days
269.2
DO23510
0 years, female, NA, stage:2, alive, 870 days
266.8
DO23534
0 years, male, NA, stage:2, alive, 840 days
266.1
DO45173
0 years, male, NA, stage:3, alive, 1170 days
265.1
DO45123
0 years, female, NA, stage:2, dead, 570 days
262.4
DO45227
0 years, female, NA, stage:2, alive, 1020 days
261.4
DO45171
0 years, male, NA, stage:3, alive, 600 days
259.6
DO48712
0 years, male, NA, stage:2, alive, 810 days
257.3
DO45217
0 years, female, NA, stage:3, dead, 270 days
255.8
DO45153
0 years, female, NA, stage:2, alive, 1380 days
254.1
DO45269
0 years, male, NA, stage:3, alive, 750 days
253.9
DO48746
0 years, male, NA, stage:3, alive, 570 days
253.0
DO50809
0 years, male, NA, stage:3, dead, 720 days
248.5
DO45251
0 years, female, NA, stage:2, alive, 900 days
244.4
DO45139
0 years, male, NA, stage:3, alive, 1320 days
243.4
DO45143
0 years, male, NA, stage:3, alive, 1290 days
243.3
DO48741
0 years, male, NA, stage:3, alive, 240 days
238.5
DO45135
0 years, male, NA, stage:1, alive, 1410 days
237.4
DO45235
0 years, female, NA, stage:1, alive, 900 days
231.6
DO50840
0 years, male, NA, stage:2, alive, 330 days
230.1
DO48706
0 years, male, NA, stage:2, alive, 870 days
230.0
DO45267
0 years, male, NA, stage:3, dead, 570 days
229.0
DO45133
0 years, male, NA, stage:3, dead, 660 days
227.0
DO45165
0 years, male, NA, stage:2, alive, 690 days
226.8
DO45161
0 years, male, NA, stage:2, dead, 540 days
226.7
DO48728
0 years, female, NA, stage:2, alive, 150 days
226.5
DO50808
0 years, male, NA, stage:2, alive, 570 days
225.5
DO45239
0 years, male, NA, stage:2, alive, 870 days
223.1
DO23535
0 years, male, NA, stage:1, alive, 960 days
221.8
DO23549
0 years, male, NA, stage:3, alive, 990 days
221.2
DO23533
0 years, male, NA, stage:2, alive, 900 days
218.5
DO45111
0 years, male, NA, stage:2, alive, 1590 days
216.9
DO45201
0 years, male, NA, stage:1, alive, 900 days
215.7
DO23540
0 years, male, NA, stage:1, alive, 750 days
213.5
DO23552
0 years, female, NA, stage:1, alive, 810 days
211.5
DO48679
0 years, male, NA, stage:2, alive, 1200 days
210.6
DO45169
0 years, male, NA, stage:3, alive, 1350 days
208.3
DO50798
0 years, male, NA, stage:3, dead, 30 days
208.2
DO45093
0 years, male, NA, stage:2, dead, 720 days
203.4
DO45163
0 years, male, NA, stage:2, alive, 960 days
195.5
DO48730
0 years, female, NA, stage:2, alive, 630 days
195.1
DO48727
0 years, female, NA, stage:2, dead, 390 days
194.8
DO48681
0 years, male, NA, stage:2, alive, 900 days
193.8
DO50807
0 years, male, NA, stage:1, alive, 540 days
192.0
DO23543
0 years, male, NA, stage:2, alive, 1020 days
190.3
DO45219
0 years, male, NA, stage:2, alive, 1080 days
189.3
DO48716
0 years, male, NA, stage:2, alive, 720 days
187.0
DO45281
0 years, male, NA, stage:4, alive, 750 days
186.6
DO50791
0 years, female, NA, stage:1, dead, 480 days
185.4
DO45207
0 years, male, NA, stage:1, alive, 1050 days
185.0
DO48715
0 years, female, NA, stage:2, dead, 690 days
179.8
DO45221
0 years, female, NA, stage:4, dead, 390 days
177.7
DO23524
0 years, female, NA, stage:2, alive, 1050 days
174.3
DO48743
0 years, female, NA, stage:2, alive, 570 days
173.8
DO50778
0 years, male, NA, stage:4, alive, 630 days
172.1
DO23537
0 years, male, NA, stage:2, dead, 900 days
171.3
DO45149
0 years, female, NA, stage:2, alive, 1260 days
169.6
DO45119
0 years, male, NA, stage:3, dead, 510 days
168.4
DO45113
0 years, male, NA, stage:3, alive, 1560 days
167.6
DO45185
0 years, male, NA, stage:2, alive, 600 days
166.3
DO45127
0 years, male, NA, stage:3, dead, 420 days
166.3
DO48672
0 years, male, NA, stage:2, alive, 450 days
165.5
DO48720
0 years, female, NA, stage:2, alive, 570 days
164.7
DO50799
0 years, female, NA, stage:2, alive, 540 days
160.8
DO50803
0 years, female, NA, stage:1, alive, 540 days
160.6
DO50787
0 years, male, NA, stage:3, alive, 480 days
160.2
DO45091
0 years, male, NA, stage:2, dead, 1320 days
156.9
DO45253
0 years, male, NA, stage:2, alive, 870 days
155.4
DO23521
0 years, male, NA, stage:3, alive, 1110 days
154.9
DO50819
0 years, female, NA, stage:2, alive, 510 days
153.5
DO45157
0 years, male, NA, stage:2, alive, 1980 days
148.3
DO45223
0 years, male, NA, stage:4, alive, 1020 days
143.3
DO23519
0 years, male, NA, stage:3, alive, 630 days
140.7
DO45131
0 years, male, NA, stage:4, dead, 360 days
138.8
DO45155
0 years, male, NA, stage:2, alive, 2160 days
138.6
DO45189
0 years, female, NA, stage:2, alive, 1200 days
136.6
DO23526
0 years, male, NA, stage:3, alive, 1050 days
136.0
DO48757
0 years, female, NA, stage:3, alive, 480 days
133.1
DO45205
0 years, female, NA, stage:2, dead, 90 days
133.0
DO45175
0 years, male, NA, stage:2, alive, 1140 days
132.1
DO45117
0 years, female, NA, stage:2, dead, 1110 days
131.9
DO50774
0 years, female, NA, stage:2, alive, 720 days
130.2
DO48721
0 years, female, NA, stage:1, alive, 900 days
125.9
DO48732
0 years, male, NA, stage:3, alive, 630 days
125.8
DO23547
0 years, male, NA, stage:1, alive, 1020 days
124.6
DO45237
0 years, male, NA, stage:2, alive, 900 days
123.7
DO48704
0 years, female, NA, stage:3, alive, 750 days
109.4
DO45197
0 years, male, NA, stage:2, alive, 1170 days
95.5
DO45225
0 years, male, NA, stage:1, alive, 1050 days
91.6
DO50832
0 years, male, NA, stage:3, alive, 90 days
90.9
DO23530
0 years, male, NA, stage:4, dead, 180 days
89.2
DO23513
0 years, male, NA, stage:3, alive, 1200 days
87.6
DO23509
0 years, male, NA, stage:3, dead, 780 days
76.1
DO48747
0 years, male, NA, stage:3, alive, 540 days
64.1
DO45275
0 years, male, NA, stage:3, dead, 10 days
58.1
DO45301
0 years, male, NA, stage:2, dead, 1440 days
52.7
DO45249
0 years, male, NA, stage:1, alive, 630 days
50.1
DO50829
0 years, male, NA, stage:3, alive, 570 days
48.8
DO45303
0 years, female, NA, stage:3, alive, 990 days
22.4
DO45305
0 years, male, NA, stage:4, alive, 300 days
15.5
DO45287
0 years, male, NA, stage:1, alive, 390 days
14.4
DO45307
0 years, female, NA, stage:4, dead, 240 days
10.1
DO45283
0 years, male, NA, stage:3, alive, 510 days
9.6
DO45285
0 years, male, NA, stage:3, alive, 480 days
6.6
DO45279
0 years, male, NA, stage:3, alive, 1290 days
4.4
DO23523
0 years, male, NA, stage:3, alive, 1080 days
2.3
DO45277
0 years, male, NA, stage:3, alive, 600 days
2.1
DO45299
0 years, female, NA, stage:1, alive, 1440 days
1.6
DO45297
0 years, female, NA, stage:4, dead, 1260 days
1.0
DO45245
0 years, female, NA, stage:2, dead, 240 days
0.6
DO45211
0 years, male, NA, stage:3, alive, 240 days
0.5
Show allShow less
LIVER HEPATOCELLULAR CARCINOMA - Protein relative expression (CPTAC)
Number of samples
330
Samples
Sample ID
Sample type
nRPX
425
Tumor
1.2
937
Tumor
1.2
618
Normal
0.8
356
Normal
0.8
746
Normal
0.8
721
Tumor
0.7
698
Normal
0.7
636
Normal
0.7
128
Normal
0.7
186
Normal
0.7
426
Normal
0.7
472
Normal
0.7
778
Normal
0.7
286
Normal
0.7
452
Normal
0.7
131
Tumor
0.7
858
Normal
0.6
864
Normal
0.6
436
Normal
0.6
358
Normal
0.6
568
Normal
0.6
285
Tumor
0.6
664
Normal
0.6
1016
Normal
0.6
526
Normal
0.6
463
Tumor
0.6
648
Normal
0.6
564
Normal
0.6
815
Tumor
0.6
553
Tumor
0.6
742
Normal
0.6
414
Normal
0.6
227
Tumor
0.6
132
Normal
0.6
738
Normal
0.6
196
Normal
0.6
332
Normal
0.6
1028
Normal
0.6
474
Normal
0.5
428
Normal
0.5
368
Normal
0.5
462
Normal
0.5
422
Normal
0.5
342
Normal
0.5
1031
Tumor
0.5
662
Normal
0.5
628
Normal
0.5
376
Normal
0.5
466
Normal
0.5
484
Normal
0.5
558
Normal
0.5
813
Tumor
0.5
482
Normal
0.5
388
Normal
0.5
824
Normal
0.5
1046
Normal
0.5
723
Tumor
0.5
258
Normal
0.5
918
Normal
0.5
981
Tumor
0.5
223
Tumor
0.5
222
Normal
0.5
866
Normal
0.4
228
Normal
0.4
218
Normal
0.4
278
Normal
0.4
818
Normal
0.4
528
Normal
0.4
546
Normal
0.4
554
Normal
0.4
523
Tumor
0.4
666
Normal
0.4
572
Normal
0.4
728
Normal
0.4
722
Normal
0.4
862
Normal
0.4
518
Normal
0.4
362
Normal
0.4
696
Normal
0.4
1026
Normal
0.4
672
Normal
0.4
464
Normal
0.4
396
Normal
0.4
1044
Normal
0.4
737
Tumor
0.4
114
Normal
0.4
882
Normal
0.4
964
Normal
0.4
686
Normal
0.4
446
Normal
0.4
111
Normal
0.4
471
Tumor
0.4
412
Normal
0.4
314
Normal
0.4
938
Normal
0.4
416
Normal
0.4
616
Normal
0.4
968
Normal
0.4
878
Normal
0.4
955
Tumor
0.4
123
Tumor
0.4
574
Normal
0.4
494
Normal
0.4
221
Tumor
0.4
952
Normal
0.4
984
Normal
0.4
975
Tumor
0.4
912
Normal
0.3
534
Normal
0.3
922
Normal
0.3
124
Normal
0.3
148
Normal
0.3
138
Normal
0.3
352
Normal
0.3
956
Normal
0.3
816
Normal
0.3
142
Normal
0.3
527
Tumor
0.3
284
Normal
0.3
392
Normal
0.3
212
Normal
0.3
982
Normal
0.3
448
Normal
0.3
914
Normal
0.3
328
Normal
0.3
1022
Normal
0.3
744
Normal
0.3
868
Normal
0.3
424
Normal
0.3
488
Normal
0.3
394
Normal
0.3
642
Normal
0.3
497
Tumor
0.3
364
Normal
0.3
1032
Normal
0.3
514
Normal
0.3
884
Normal
0.3
786
Normal
0.3
468
Normal
0.3
983
Tumor
0.3
126
Normal
0.3
214
Normal
0.3
524
Normal
0.3
851
Tumor
0.3
298
Normal
0.3
713
Tumor
0.3
1043
Tumor
0.3
515
Tumor
0.2
354
Normal
0.2
873
Tumor
0.2
924
Normal
0.2
363
Tumor
0.2
714
Normal
0.2
413
Tumor
0.2
162
Normal
0.2
1014
Normal
0.2
456
Normal
0.2
715
Tumor
0.2
665
Tumor
0.2
743
Tumor
0.2
635
Tumor
0.2
966
Normal
0.2
944
Normal
0.2
172
Normal
0.2
432
Normal
0.2
411
Tumor
0.2
232
Normal
0.2
136
Normal
0.2
272
Normal
0.2
481
Tumor
0.2
271
Tumor
0.2
1042
Normal
0.2
874
Normal
0.2
716
Normal
0.2
187
Tumor
0.2
756
Normal
0.2
113
Tumor
0.2
1025
Tumor
0.2
516
Normal
0.1
262
Normal
0.1
443
Tumor
0.1
863
Tumor
0.1
852
Normal
0.1
814
Normal
0.1
745
Tumor
0.1
188
Normal
0.1
921
Tumor
0.1
926
Normal
0.1
976
Normal
0.1
915
Tumor
0.1
517
Tumor
0.1
877
Tumor
0.1
366
Normal
0.1
386
Normal
0.1
967
Tumor
0.1
958
Normal
0.1
538
Normal
0.1
431
Tumor
0.0
384
Normal
0.0
916
Normal
0.0
954
Normal
0.0
268
Normal
0.0
823
Tumor
0.0
312
Normal
0.0
145
Tumor
0.0
1021
Tumor
0.0
641
Tumor
0.0
191
Tumor
0.0
344
Normal
0.0
492
Normal
0.0
434
Normal
0.0
777
Tumor
0.0
277
Tumor
0.0
444
Normal
0.0
881
Tumor
0.0
353
Tumor
0.0
261
Tumor
0.0
435
Tumor
0.0
978
Normal
0.0
865
Tumor
0.0
557
Tumor
-0.1
617
Tumor
-0.1
977
Tumor
-0.1
433
Tumor
-0.1
387
Tumor
-0.1
146
Normal
-0.1
217
Tumor
-0.1
477
Tumor
-0.1
647
Tumor
-0.1
112
Tumor
-0.1
447
Tumor
-0.2
755
Tumor
-0.2
224
Normal
-0.2
957
Tumor
-0.2
341
Tumor
-0.2
421
Tumor
-0.2
545
Tumor
-0.2
451
Tumor
-0.2
487
Tumor
-0.3
478
Normal
-0.3
883
Tumor
-0.3
861
Tumor
-0.3
963
Tumor
-0.3
467
Tumor
-0.3
627
Tumor
-0.3
365
Tumor
-0.3
536
Normal
-0.4
135
Tumor
-0.4
147
Tumor
-0.4
331
Tumor
-0.4
327
Tumor
-0.4
415
Tumor
-0.4
1045
Tumor
-0.4
383
Tumor
-0.4
563
Tumor
-0.4
951
Tumor
-0.4
465
Tumor
-0.4
817
Tumor
-0.4
498
Normal
-0.4
195
Tumor
-0.4
393
Tumor
-0.4
911
Tumor
-0.5
461
Tumor
-0.5
423
Tumor
-0.5
171
Tumor
-0.5
185
Tumor
-0.5
445
Tumor
-0.5
671
Tumor
-0.5
127
Tumor
-0.5
857
Tumor
-0.5
785
Tumor
-0.5
533
Tumor
-0.5
567
Tumor
-0.5
685
Tumor
-0.5
537
Tumor
-0.6
192
Normal
-0.6
923
Tumor
-0.6
571
Tumor
-0.6
493
Tumor
-0.6
695
Tumor
-0.6
351
Tumor
-0.6
615
Tumor
-0.6
661
Tumor
-0.6
867
Tumor
-0.6
483
Tumor
-0.7
361
Tumor
-0.7
741
Tumor
-0.7
213
Tumor
-0.7
913
Tumor
-0.7
137
Tumor
-0.7
965
Tumor
-0.7
697
Tumor
-0.7
297
Tumor
-0.7
525
Tumor
-0.8
267
Tumor
-0.8
513
Tumor
-0.8
455
Tumor
-0.8
573
Tumor
-0.8
1041
Tumor
-0.8
125
Tumor
-0.9
943
Tumor
-0.9
357
Tumor
-0.9
355
Tumor
-0.9
343
Tumor
-0.9
257
Tumor
-0.9
491
Tumor
-0.9
231
Tumor
-0.9
925
Tumor
-0.9
391
Tumor
-1.0
141
Tumor
-1.0
727
Tumor
-1.0
917
Tumor
-1.0
473
Tumor
-1.1
161
Tumor
-1.1
367
Tumor
-1.1
535
Tumor
-1.1
1015
Tumor
-1.1
395
Tumor
-1.1
1027
Tumor
-1.2
663
Tumor
-1.2
724
Normal
-1.2
313
Tumor
-1.2
1013
Tumor
-1.3
427
Tumor
-1.3
953
Tumor
-1.4
385
Tumor
-1.6
283
Tumor
-1.9
375
Tumor
-2.0
311
Tumor
-2.1
211
Tumor
-2.3
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LIVER CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.