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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
RAVER1 is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
21.5
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
51.2
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
49.7
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
49.3
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
40.8
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
35.0
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
33.5
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
31.7
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
31.1
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
31.0
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
30.8
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
30.7
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
29.9
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
29.7
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
29.1
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
28.7
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
28.7
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
28.4
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
28.2
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
28.0
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
27.5
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
26.4
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
25.2
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
24.6
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
24.1
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
22.9
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
22.7
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
22.4
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
22.1
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
21.0
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
20.9
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
20.7
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
20.6
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
20.5
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
20.5
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
20.3
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
19.2
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
19.2
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
19.0
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
18.2
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
18.1
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
17.9
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
17.2
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
16.2
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
16.0
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
15.2
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
15.1
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
14.5
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
14.2
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
14.1
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
13.3
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
12.7
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
12.3
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
11.0
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
10.6
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
10.1
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
10.0
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
9.0
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
9.0
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
8.9
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
8.8
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
8.4
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
7.5
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
3.3
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
RAVER1 is potential prognostic, high expression is favorable in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
14.0
Number of samples
521
Samples
Sample
Description
TPM
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
32.2
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
30.7
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
29.7
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
29.6
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
29.6
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
29.5
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
28.8
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
28.8
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
28.5
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
28.2
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
28.0
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
27.8
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
26.7
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
26.5
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
26.3
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
26.2
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
26.0
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
25.9
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
25.8
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
25.5
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
25.0
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
24.9
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
24.8
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
24.7
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
23.8
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
23.8
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
23.8
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
23.7
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
23.4
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
23.4
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
23.3
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
23.3
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
23.1
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
23.0
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
22.7
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
22.7
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
22.7
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
22.7
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
22.6
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
22.6
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
22.5
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
22.4
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
22.3
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
22.2
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
22.2
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
22.0
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
22.0
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
21.9
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
21.8
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
21.7
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
21.6
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
21.4
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
21.4
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
21.4
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
21.3
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
21.3
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
21.2
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
21.2
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
21.2
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
21.2
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
21.1
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
20.9
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
20.9
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
20.8
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
20.8
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
20.7
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
20.6
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
20.6
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
20.5
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
20.5
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
20.5
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
20.4
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
20.4
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
20.4
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
20.3
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
20.3
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
20.2
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
20.1
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
20.1
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
20.1
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
20.0
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
20.0
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
19.8
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
19.8
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
19.7
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
19.7
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
19.6
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
19.5
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
19.5
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
19.5
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
19.4
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
19.4
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
19.4
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
19.4
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
19.4
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
19.4
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
19.2
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
19.2
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
19.1
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
19.1
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
19.1
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
19.1
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
19.0
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
19.0
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
19.0
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
18.9
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
18.9
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
18.8
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
18.6
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
18.6
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
18.6
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
18.6
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
18.6
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
18.6
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
18.4
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
18.3
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
18.3
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
18.2
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
18.0
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
18.0
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
18.0
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
17.9
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
17.9
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
17.9
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
17.8
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
17.8
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
17.7
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
17.7
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
17.7
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
17.6
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
17.6
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
17.5
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
17.5
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
17.5
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
17.4
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
17.4
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
17.3
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
17.3
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
17.3
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
17.3
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
17.3
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
17.2
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
17.2
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
17.2
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
17.2
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
17.1
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
17.1
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
17.0
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
17.0
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
17.0
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
16.9
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
16.8
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
16.8
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
16.8
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
16.7
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
16.7
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
16.7
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
16.7
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
16.7
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
16.7
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
16.6
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
16.6
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
16.6
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
16.6
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
16.6
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
16.6
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
16.6
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
16.6
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
16.6
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
16.5
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
16.5
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
16.5
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
16.5
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
16.5
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
16.4
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
16.4
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
16.4
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
16.4
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
16.3
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
16.3
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
16.2
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
16.2
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
16.2
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
16.2
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
16.2
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
16.1
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
16.1
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
16.1
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
16.1
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
16.1
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
16.0
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
16.0
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
16.0
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
16.0
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
16.0
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
15.9
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
15.8
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
15.8
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
15.8
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
15.8
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
15.7
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
15.7
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
15.7
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
15.6
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
15.6
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
15.6
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
15.6
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
15.6
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
15.5
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
15.5
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
15.5
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
15.5
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
15.5
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
15.5
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
15.5
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
15.3
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
15.3
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
15.2
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
15.2
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
15.2
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
15.2
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
15.1
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
15.1
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
15.1
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
15.0
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
15.0
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
15.0
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
15.0
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
14.9
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
14.9
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
14.9
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
14.9
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
14.9
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
14.9
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
14.8
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
14.7
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
14.7
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
14.7
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
14.7
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
14.6
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
14.6
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
14.6
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
14.6
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
14.5
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
14.5
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
14.5
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
14.5
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
14.5
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
14.4
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
14.4
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
14.4
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
14.4
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
14.3
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
14.3
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
14.3
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
14.3
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
14.2
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
14.2
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
14.1
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
14.1
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
14.1
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
14.0
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
14.0
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
14.0
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
14.0
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
14.0
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
13.9
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
13.8
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
13.8
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
13.8
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
13.8
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
13.8
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
13.7
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
13.7
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
13.7
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
13.7
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
13.6
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
13.6
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
13.6
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
13.5
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
13.5
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
13.5
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
13.4
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
13.4
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
13.4
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
13.4
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
13.4
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
13.3
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
13.3
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
13.3
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
13.2
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
13.2
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
13.2
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
13.2
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
13.0
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
13.0
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
13.0
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
13.0
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
13.0
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
13.0
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
13.0
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
12.9
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
12.9
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
12.9
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
12.8
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
12.8
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
12.8
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
12.6
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
12.6
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
12.6
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
12.6
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
12.6
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
12.6
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
12.6
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
12.5
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
12.5
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
12.5
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
12.5
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
12.5
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
12.5
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
12.4
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
12.4
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
12.3
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
12.3
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
12.3
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
12.3
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
12.2
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
12.2
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
12.2
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
12.1
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
12.1
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
12.1
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
12.0
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
12.0
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
12.0
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
12.0
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
12.0
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
12.0
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
11.9
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
11.8
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
11.7
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
11.7
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
11.7
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
11.6
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
11.6
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
11.6
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
11.6
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
11.5
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
11.5
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
11.5
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
11.4
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
11.4
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
11.4
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
11.4
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
11.3
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
11.3
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
11.3
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
11.2
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
11.2
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
11.2
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
11.2
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
11.2
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
11.1
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
11.1
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
11.0
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
11.0
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
11.0
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
10.8
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
10.8
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
10.8
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
10.8
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
10.7
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
10.7
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
10.7
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
10.7
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
10.6
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
10.6
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
10.6
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
10.6
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
10.5
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
10.5
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
10.4
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
10.3
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
10.3
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
10.3
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
10.3
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
10.2
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
10.0
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
10.0
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
9.9
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
9.9
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
9.9
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
9.9
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
9.9
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
9.9
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
9.9
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
9.6
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
9.5
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
9.5
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
9.5
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
9.5
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
9.4
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
9.4
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
9.3
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
9.3
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
9.3
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
9.2
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
9.2
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
9.1
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
9.0
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
9.0
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
8.9
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
8.9
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
8.8
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
8.8
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
8.8
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
8.7
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
8.7
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
8.7
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
8.7
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
8.7
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
8.6
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
8.6
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
8.6
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
8.5
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
8.5
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
8.4
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
8.4
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
8.3
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
8.3
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
8.2
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
8.2
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
8.2
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
8.1
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
8.1
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
8.0
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
8.0
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
8.0
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
8.0
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
8.0
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
8.0
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
7.9
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
7.9
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
7.9
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
7.8
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
7.8
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
7.8
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
7.7
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
7.6
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
7.6
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
7.5
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
7.3
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
7.3
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
6.9
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
6.8
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
6.8
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
6.7
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
6.6
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
6.6
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
6.6
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
6.4
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
6.3
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
6.2
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
6.1
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
6.1
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
6.0
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
5.9
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
5.8
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
5.8
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
5.8
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
5.8
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
5.8
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
5.7
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
5.6
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
5.5
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
5.4
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
5.3
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
5.3
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
5.1
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
5.1
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
4.9
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
4.9
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
4.6
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
4.6
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
4.6
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
4.5
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
4.4
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
4.4
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
4.4
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
4.3
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
4.3
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
4.2
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
4.1
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
4.0
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
4.0
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
3.9
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
3.8
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
3.8
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
3.7
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
3.7
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
3.4
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
3.3
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
3.3
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
3.2
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
3.2
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
3.0
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
2.8
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
2.7
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
2.6
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
2.5
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
2.4
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
2.3
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
2.2
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
2.2
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
1.9
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
1.5
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
1.5
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
0.7
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
0.5
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
0.4
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
RAVER1 is not prognostic in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
17.9
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
50.1
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
41.3
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
32.0
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
31.9
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
31.1
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
28.4
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
26.5
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
25.9
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
25.0
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
24.5
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
24.4
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
23.4
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
22.8
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
22.5
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
22.4
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
22.3
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
22.2
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
22.1
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
22.0
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
22.0
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
21.9
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
21.8
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
21.2
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
21.1
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
20.6
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
20.3
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
20.3
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
19.9
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
19.7
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
19.6
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
19.4
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
19.3
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
19.3
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
19.3
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
19.2
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
19.1
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
19.1
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
18.9
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
18.8
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
18.7
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
18.6
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
18.6
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
18.5
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
18.4
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
18.3
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
18.3
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
18.3
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
18.3
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
18.2
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
18.1
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
17.7
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
17.6
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
17.5
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
17.3
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
17.2
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
17.1
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
17.0
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
16.5
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
16.4
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
16.3
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
16.3
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
16.0
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
15.8
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
15.4
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
15.4
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
15.2
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
15.0
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
15.0
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
15.0
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
14.8
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
14.6
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
14.5
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
14.5
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
14.5
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
14.3
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
14.3
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
14.3
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
14.3
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
14.2
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
13.8
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
13.7
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
13.6
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
13.2
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
13.0
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
12.9
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
12.8
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
12.5
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
12.4
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
12.4
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
11.6
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
11.4
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
11.2
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
10.8
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
10.4
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
10.1
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
5.7
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
5.5
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
5.0
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
3.7
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
RAVER1 is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
16.5
Number of samples
282
Samples
Sample
Description
TPM
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
62.5
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
51.1
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
46.3
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
43.3
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
42.3
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
42.2
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
41.9
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
41.3
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
40.7
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
39.7
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
39.2
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
37.6
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
37.2
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
36.6
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
35.9
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
35.8
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
35.7
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
35.0
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
34.2
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
34.1
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
33.8
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
33.6
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
33.5
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
33.5
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
33.4
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
32.1
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
31.8
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
31.6
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
31.5
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
31.4
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
31.3
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
30.9
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
30.8
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
30.6
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
30.3
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
29.8
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
29.6
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
29.3
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
28.6
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
28.6
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
28.5
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
28.5
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
27.9
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
27.7
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
26.9
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
26.8
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
26.7
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
26.5
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
26.3
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
26.2
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
26.0
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
26.0
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
26.0
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
25.8
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
25.5
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
25.5
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
25.4
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
25.3
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
25.3
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
25.1
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
25.1
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
24.9
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
24.8
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
24.8
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
24.2
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
23.5
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
23.5
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
23.1
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
23.1
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
22.8
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
22.7
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
22.5
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
22.4
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
22.1
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
22.1
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
22.0
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
21.9
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
21.7
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
21.6
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
21.5
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
21.5
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
21.4
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
21.4
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
21.4
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
21.1
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
21.1
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
20.6
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
20.5
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
20.5
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
20.2
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
20.1
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
20.0
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
19.9
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
19.7
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
19.7
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
19.3
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
19.2
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
19.0
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
18.9
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
18.8
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
18.7
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
18.7
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
18.7
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
18.6
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
18.6
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
18.5
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
18.4
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
18.4
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
18.2
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
17.6
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
17.6
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
17.5
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
17.5
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
17.4
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
17.3
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
17.2
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
17.0
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
17.0
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
17.0
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
16.9
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
16.8
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
16.7
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
16.5
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
16.5
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
16.5
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
16.3
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
16.3
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
16.3
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
16.2
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
16.1
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
16.0
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
16.0
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
15.9
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
15.9
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
15.9
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
15.6
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
15.6
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
15.6
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
15.6
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
15.6
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
15.4
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
15.2
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
15.2
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
15.1
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
15.0
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
14.8
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
14.6
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
14.5
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
14.5
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
14.5
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
14.3
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
14.1
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
14.1
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
14.1
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
13.9
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
13.7
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
13.6
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
13.4
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
13.4
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
13.3
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
13.2
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
13.2
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
13.1
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
13.1
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
13.0
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
13.0
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
13.0
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
12.8
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
12.6
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
12.6
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
12.4
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
12.4
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
12.3
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
12.2
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
12.2
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
12.2
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
12.2
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
12.1
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
12.0
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
12.0
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
11.9
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
11.7
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
11.7
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
11.6
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
11.4
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
11.4
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
11.4
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
11.4
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
11.4
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
11.4
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
11.1
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
11.1
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
11.0
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
11.0
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
10.9
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
10.9
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
10.8
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
10.5
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
10.5
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
10.3
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
10.2
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
10.1
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
10.1
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
9.9
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
9.8
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
9.8
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
9.7
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
9.2
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
9.2
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
9.1
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
9.1
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
8.9
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
8.9
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
8.8
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
8.3
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
7.9
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
7.8
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
7.6
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
7.5
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
7.5
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
7.4
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
7.1
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
7.1
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
6.8
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
6.6
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
6.6
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
6.5
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
6.2
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
6.1
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
6.0
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
6.0
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
5.9
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
5.7
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
5.6
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
5.4
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
5.4
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
5.3
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
5.3
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
5.0
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
4.9
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
4.9
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
4.8
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
4.5
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
4.4
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
4.4
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
4.3
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
4.3
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
4.0
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
3.9
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
3.9
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
3.8
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
3.7
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
3.6
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
3.5
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
3.4
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
3.4
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
3.1
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
3.1
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
3.0
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
2.9
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
2.8
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
2.7
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
2.4
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
2.3
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
2.1
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
1.9
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
1.9
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
1.8
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
1.1
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
1.0
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
0.8
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
0.4
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
0.2
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
0.0
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
0.0
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
0.0
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
0.0
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
0.0
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
0.0
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
0.0
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
0.0
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
0.0
Show allShow less
RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0017410003
Tumor
0.6
CPT0069160003
Tumor
0.6
CPT0001340003
Tumor
0.6
CPT0014450004
Tumor
0.5
CPT0077110003
Tumor
0.5
CPT0006440003
Tumor
0.5
CPT0081880003
Tumor
0.5
CPT0009060003
Tumor
0.5
CPT0024670003
Tumor
0.5
CPT0012180003
Tumor
0.5
CPT0086950003
Tumor
0.5
CPT0076330003
Tumor
0.5
CPT0009000003
Tumor
0.5
CPT0092790003
Tumor
0.4
CPT0017850003
Tumor
0.4
CPT0088630003
Tumor
0.4
CPT0086820003
Tumor
0.4
CPT0088690003
Tumor
0.4
CPT0086030003
Tumor
0.4
CPT0078930003
Tumor
0.4
CPT0071150004
Tumor
0.3
CPT0001260009
Tumor
0.3
CPT0079380003
Tumor
0.3
CPT0020120003
Tumor
0.3
CPT0026410003
Tumor
0.3
CPT0075560003
Tumor
0.3
CPT0000780007
Tumor
0.3
CPT0015730003
Tumor
0.3
CPT0065690003
Tumor
0.3
CPT0081600003
Tumor
0.3
CPT0089460004
Tumor
0.3
CPT0014370004
Tumor
0.3
CPT0063320003
Tumor
0.3
CPT0010160003
Tumor
0.3
CPT0010110003
Tumor
0.3
CPT0012900004
Tumor
0.3
CPT0088900003
Tumor
0.3
CPT0077490003
Tumor
0.3
CPT0012080003
Tumor
0.3
CPT0001500009
Tumor
0.3
CPT0006900003
Tumor
0.3
CPT0092290003
Tumor
0.3
CPT0025580004
Tumor
0.3
CPT0063630003
Tumor
0.3
CPT0085670003
Tumor
0.3
CPT0025050003
Tumor
0.3
CPT0023690003
Tumor
0.2
CPT0086360003
Tumor
0.2
CPT0025290003
Tumor
0.2
CPT0025230003
Tumor
0.2
CPT0006630003
Tumor
0.2
CPT0092160003
Tumor
0.2
CPT0012550003
Tumor
0.2
CPT0065810003
Tumor
0.2
CPT0086870003
Tumor
0.2
CPT0023350003
Tumor
0.2
CPT0012370003
Tumor
0.2
CPT0088550004
Tumor
0.2
CPT0014160003
Tumor
0.2
CPT0001540009
Tumor
0.2
CPT0075130003
Tumor
0.2
CPT0025350003
Tumor
0.2
CPT0001220008
Tumor
0.2
CPT0012280003
Tumor
0.2
CPT0078510003
Tumor
0.2
CPT0088480003
Tumor
0.2
CPT0064370003
Tumor
0.2
CPT0066470004
Tumor
0.2
CPT0092730003
Tumor
0.2
CPT0075720003
Tumor
0.2
CPT0092190003
Normal
0.2
CPT0065930003
Tumor
0.2
CPT0000870016
Tumor
0.2
CPT0025110003
Tumor
0.2
CPT0077320001
Normal
0.2
CPT0002350011
Tumor
0.2
CPT0078990003
Tumor
0.1
CPT0025170003
Tumor
0.1
CPT0019130003
Tumor
0.1
CPT0007860003
Tumor
0.1
CPT0088760003
Tumor
0.1
CPT0077310003
Tumor
0.1
CPT0079510001
Normal
0.1
CPT0065430003
Tumor
0.1
CPT0081990003
Tumor
0.1
CPT0079180003
Tumor
0.1
CPT0065750003
Tumor
0.1
CPT0087040003
Tumor
0.1
CPT0015910003
Tumor
0.1
CPT0000640003
Tumor
0.1
CPT0079230003
Tumor
0.1
CPT0015810003
Tumor
0.0
CPT0088970003
Tumor
0.0
CPT0011240003
Tumor
0.0
CPT0010120001
Normal
0.0
CPT0024680001
Normal
0.0
CPT0078660003
Tumor
0.0
CPT0079300001
Normal
0.0
CPT0014470001
Normal
0.0
CPT0007320003
Tumor
0.0
CPT0019990003
Tumor
0.0
CPT0089020003
Tumor
0.0
CPT0065870003
Tumor
0.0
CPT0025880003
Tumor
0.0
CPT0011410003
Tumor
0.0
CPT0018250001
Normal
0.0
CPT0066480003
Tumor
0.0
CPT0079270003
Tumor
0.0
CPT0012670003
Tumor
0.0
CPT0017450001
Normal
0.0
CPT0075170001
Normal
0.0
CPT0078830003
Tumor
0.0
CPT0079410003
Tumor
-0.1
CPT0001230001
Normal
-0.1
CPT0001270001
Normal
-0.1
CPT0021240003
Tumor
-0.1
CPT0086890003
Normal
-0.1
CPT0084590001
Normal
-0.1
CPT0002370001
Normal
-0.1
CPT0012920003
Normal
-0.1
CPT0006530001
Normal
-0.1
CPT0084560003
Tumor
-0.1
CPT0078530001
Normal
-0.1
CPT0009020003
Normal
-0.1
CPT0019160001
Normal
-0.1
CPT0069000003
Tumor
-0.1
CPT0088570001
Normal
-0.1
CPT0075570001
Normal
-0.1
CPT0001510001
Normal
-0.1
CPT0001550001
Normal
-0.1
CPT0086830003
Normal
-0.1
CPT0069190001
Normal
-0.1
CPT0014350001
Normal
-0.1
CPT0012090003
Normal
-0.1
CPT0063330001
Normal
-0.1
CPT0079480003
Tumor
-0.1
CPT0001180009
Tumor
-0.1
CPT0012290003
Normal
-0.1
CPT0020020001
Normal
-0.2
CPT0065820001
Normal
-0.2
CPT0023710001
Normal
-0.2
CPT0025610001
Normal
-0.2
CPT0023360001
Normal
-0.2
CPT0010170001
Normal
-0.2
CPT0006730001
Normal
-0.2
CPT0086370003
Normal
-0.2
CPT0026420001
Normal
-0.2
CPT0009080003
Normal
-0.2
CPT0000890001
Normal
-0.2
CPT0078670001
Normal
-0.2
CPT0079000001
Normal
-0.2
CPT0012640003
Normal
-0.2
CPT0066520001
Normal
-0.2
CPT0088780001
Normal
-0.2
CPT0079430001
Normal
-0.2
CPT0087050003
Normal
-0.2
CPT0025920001
Normal
-0.2
CPT0000790001
Normal
-0.2
CPT0065450001
Normal
-0.2
CPT0000660001
Normal
-0.2
CPT0006950001
Normal
-0.2
CPT0092740003
Normal
-0.2
CPT0077500001
Normal
-0.2
CPT0081620001
Normal
-0.2
CPT0088710001
Normal
-0.2
CPT0064400001
Normal
-0.2
CPT0088920001
Normal
-0.2
CPT0063640001
Normal
-0.2
CPT0088640003
Normal
-0.2
CPT0078940001
Normal
-0.2
CPT0089480003
Normal
-0.2
CPT0001350001
Normal
-0.2
CPT0025060001
Normal
-0.3
CPT0013790003
Normal
-0.3
CPT0001190001
Normal
-0.3
CPT0078840001
Normal
-0.3
CPT0007470001
Normal
-0.3
CPT0069010001
Normal
-0.3
CPT0092800003
Normal
-0.3
CPT0014130001
Normal
-0.3
CPT0076350001
Normal
-0.3
CPT0020130001
Normal
-0.3
CPT0066430001
Normal
-0.3
CPT0088500001
Normal
-0.3
CPT0089040001
Normal
-0.3
CPT0092310003
Normal
-0.3
CPT0012770003
Normal
-0.3
CPT0082010001
Normal
-0.4
CPT0007870001
Normal
-0.4
CPT0086970003
Normal
-0.4
CPT0077140001
Normal
-0.4
CPT0012570003
Normal
-0.4
CPT0002270011
Tumor
-0.5
CPT0078800003
Tumor
-0.5
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
