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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
49.2
nTPM
HPA Brain:
42.1
nTPM
GTEx:
49.2
nTPM
FANTOM5:
15.8
Scaled Tags Per Million
Pig:
64.1
nTPM
Mouse:
33.4
nTPM
Allen mouse:
3.3
Expression energy
AMYGDALA - Annotated protein expression
Pending normal tissue analysis
AMYGDALA - HPA Brain RNA-seq
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
42.1
Sample id
Sample description
nTPM
Amygdala nTPM: 37.9
2814
Male, age 76, right hemisphere
47.9
2695
Female, age 67, right hemisphere
38.5
2514
Male, age 75, right hemisphere
35.0
1987
Female, age 91, left hemisphere
34.4
2517
Female, age 94, left hemisphere
33.8
Basal amygdala nTPM: 32.5
2609
Male, age 75, right hemisphere
39.5
1955
Male, age 76, both hemispheres
36.6
2685
Female, age 94, left hemisphere
34.4
2827
Female, age 67, right hemisphere
32.1
2110
Male, age 80, left hemisphere
30.4
2243
Female, age 91, right hemisphere
21.8
Central amygdala nTPM: 39.5
2826
Female, age 94, left hemisphere
47.9
1905
Male, age 76, both hemispheres
47.2
2515
Male, age 75, right hemisphere
41.4
2239
Male, age 80, left hemisphere
32.2
2701
Female, age 91, right hemisphere
28.7
Corticomedial amygdala nTPM: 26.3
2428
Male, age 75, right hemisphere
35.3
2535
Female, age 67, right hemisphere
27.1
2829
Male, age 80, left hemisphere
26.1
2429
Female, age 94, left hemisphere
25.5
2242
Female, age 91, right hemisphere
23.1
2240
Male, age 76, both hemispheres
20.8
Lateral amygdala nTPM: 42.1
2534
Female, age 94, left hemisphere
45.9
2516
Male, age 75, right hemisphere
44.2
2830
Female, age 67, right hemisphere
44.2
1883
Male, age 76, both hemispheres
41.4
2256
Male, age 80, left hemisphere
41.3
2255
Female, age 91, right hemisphere
35.9
AMYGDALA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
49.2
GTEx sample id
Sample description
nTPM
Brain - Amygdala Average nTPM: 49.2
Samples: 152
Max nTPM: 149.5
Min nTPM: 21.1
Std nTPM: 17.9
Median nTPM: 47.5
GTEX-14E7W-0011-R4b-SM-62LEA
70-79 years, male
149.5
GTEX-14JG1-0011-R4b-SM-62LEB
40-49 years, male
103.1
GTEX-17HG3-0011-R4a-SM-7IGLL
30-39 years, female
96.1
GTEX-147GR-0011-R4a-SM-5S2V2
60-69 years, male
88.0
GTEX-1JMQJ-0011-R4b-SM-EXUT8
50-59 years, male
88.0
GTEX-12WSH-0011-R4a-SM-5GU6K
50-59 years, male
83.7
GTEX-1C6WA-0011-R4a-SM-9QEH2
60-69 years, male
83.6
GTEX-1H2FU-0011-R4a-SM-CL551
60-69 years, female
83.4
GTEX-183WM-0011-R4a-SM-7LG6S
70-79 years, female
81.1
GTEX-1F75A-0011-R4a-SM-ARL8J
50-59 years, male
78.2
GTEX-ZE9C-0011-R4a-SM-4WKH6
60-69 years, male
77.5
GTEX-1CB4G-0011-R4b-SM-CJI28
60-69 years, male
75.2
GTEX-14JFF-0011-R4a-SM-5ZZV5
60-69 years, male
75.0
GTEX-1C6VR-0011-R4b-SM-9QEGZ
60-69 years, male
74.3
GTEX-11ZU8-0011-R4a-SM-5BC6Y
60-69 years, male
74.0
GTEX-1JJEA-0011-R4a-SM-EXUTC
60-69 years, male
71.5
GTEX-1H1CY-0011-R4b-SM-CJI3G
60-69 years, female
71.1
GTEX-ZAB4-0011-R4a-SM-4SOKB
40-49 years, male
69.5
GTEX-1J8Q2-0011-R4a-SM-ADEHA
60-69 years, male
68.2
GTEX-1B8L1-0011-R4a-SM-7EWFJ
60-69 years, male
67.6
GTEX-13QIC-0011-R4a-SM-5PNX8
60-69 years, female
66.5
GTEX-12WSA-0011-R4a-SM-57WB7
60-69 years, male
66.2
GTEX-Y8DK-0011-R4A-SM-EXUR1
60-69 years, male
64.2
GTEX-13112-0011-R4b-SM-5DUXL
50-59 years, male
63.5
GTEX-14ASI-0011-R4a-SM-69LQ4
60-69 years, male
62.7
GTEX-13FLV-0011-R4a-SM-5LZYU
50-59 years, male
62.4
GTEX-14PJM-0011-R4a-SM-5YYAS
50-59 years, female
61.4
GTEX-131XH-0011-R4b-SM-5DUWB
50-59 years, male
60.8
GTEX-145MI-0011-R4b-SM-5PNZH
60-69 years, female
60.7
GTEX-18464-0011-R4a-SM-7LG6T
50-59 years, male
60.7
GTEX-X585-0011-R4B-SM-46MVH
50-59 years, male
59.8
GTEX-16YQH-0011-R4a-SM-7EPGI
30-39 years, male
59.4
GTEX-13JVG-0011-R4a-SM-5MR4C
60-69 years, male
59.3
GTEX-12ZZW-0011-R4a-SM-5DUX9
50-59 years, male
58.2
GTEX-1E1VI-0011-R4b-SM-9QEHV
50-59 years, male
58.2
GTEX-13OVH-0011-R4a-SM-5KM3W
70-79 years, male
58.0
GTEX-RNOR-0011-R4A-SM-3GAD3
50-59 years, female
57.7
GTEX-13O3Q-0011-R4a-SM-5P9H2
50-59 years, male
57.3
GTEX-1EX96-0011-R4a-SM-ARU82
50-59 years, male
57.3
GTEX-13OVL-0011-R4b-SM-5L3HV
50-59 years, male
57.2
GTEX-13OW7-0011-R4b-SM-5O9CX
50-59 years, male
56.4
GTEX-1H23P-0011-R4b-SM-CL54R
60-69 years, male
55.8
GTEX-1GF9W-0011-R4a-SM-CE6RH
60-69 years, male
55.5
GTEX-1I1GR-0011-R4a-SM-CMKHC
60-69 years, male
55.4
GTEX-1F7RK-0011-R4b-SM-9QEI7
20-29 years, female
54.9
GTEX-1HBPI-0011-R4a-SM-CJI3K
50-59 years, male
54.3
GTEX-139T8-0011-R4a-SM-5HL54
60-69 years, male
54.2
GTEX-12WSF-0011-R4b-SM-5HL88
70-79 years, male
54.1
GTEX-11ONC-0011-R4b-SM-DO93H
60-69 years, male
53.9
GTEX-X4XX-0011-R4B-SM-46MWL
60-69 years, male
53.6
GTEX-12WSD-0011-R4b-SM-5LZUA
60-69 years, female
53.2
GTEX-13CZV-0011-R4b-SM-5J2NY
60-69 years, male
52.6
GTEX-11ZVC-0011-R4a-SM-5BC6Z
50-59 years, female
52.0
GTEX-13OW6-0011-R4a-SM-5O9DX
50-59 years, male
52.0
GTEX-13NYB-0011-R4b-SM-9QEGJ
40-49 years, male
51.1
GTEX-T5JC-0011-R4A-SM-32PLT
20-29 years, male
50.8
GTEX-17EVP-0011-R4a-SM-79OML
40-49 years, male
50.7
GTEX-17EVQ-0011-R4b-SM-7LT94
70-79 years, male
50.7
GTEX-1N2DW-0011-R4b-SM-EZ6MD
50-59 years, male
50.7
GTEX-145LS-0011-R4b-SM-5S2UT
60-69 years, female
50.5
GTEX-1GZ4I-0011-R4a-SM-9QEI9
50-59 years, male
50.5
GTEX-1F6IF-0011-R4b-SM-CKZNJ
60-69 years, male
50.3
GTEX-1J1OQ-0011-R4a-SM-D4P2A
40-49 years, female
50.3
GTEX-12ZZZ-0011-R4b-SM-5DUV7
60-69 years, male
50.1
GTEX-144GL-0011-R4a-SM-5PNUI
50-59 years, male
49.5
GTEX-1F48J-0011-R4b-SM-9OSVX
50-59 years, female
49.5
GTEX-1GTWX-0011-R4a-SM-C1YQI
60-69 years, male
49.4
GTEX-1B996-0011-R4b-SM-9OSVO
60-69 years, male
49.1
GTEX-15SHU-0011-R4b-SM-7IGLC
40-49 years, female
48.9
GTEX-ZAK1-0011-R4a-SM-6AJBK
50-59 years, female
48.9
GTEX-1JN6P-0011-R4a-SM-EZ6MS
60-69 years, male
48.8
GTEX-1H1DG-0011-R4a-SM-CE6RQ
70-79 years, male
48.6
GTEX-13SLX-0011-R4a-SM-5O9BJ
50-59 years, female
48.2
GTEX-1J8EW-0011-R4b-SM-ARU89
60-69 years, female
48.0
GTEX-13X6J-0011-R4b-SM-5P9K4
50-59 years, male
47.8
GTEX-1399T-0011-R4b-SM-5DUVX
60-69 years, male
47.6
GTEX-14BIM-0011-R4b-SM-5S2RK
60-69 years, female
47.4
GTEX-13OW8-0011-R4a-SM-9WG6V
60-69 years, male
46.5
GTEX-13N2G-0011-R4b-SM-5MR54
60-69 years, male
46.4
GTEX-1HBPH-0011-R4a-SM-A96RX
40-49 years, female
46.2
GTEX-1LSVX-0011-R4b-SM-EXURP
60-69 years, male
45.9
GTEX-1313W-0011-R4b-SM-5KLZV
50-59 years, female
45.8
GTEX-WZTO-0011-R4A-SM-3NMC7
40-49 years, male
45.4
GTEX-1ICLZ-0011-R4a-SM-CMKHL
60-69 years, male
45.3
GTEX-14JIY-0011-R4b-SM-5ZZV7
60-69 years, male
44.7
GTEX-14PQA-0011-R4b-SM-6AJBU
50-59 years, female
44.6
GTEX-13N1W-0011-R4a-SM-5MR52
70-79 years, male
44.3
GTEX-XLM4-0011-R4B-SM-4AT5C
60-69 years, male
44.3
GTEX-N7MS-0011-R4a-SM-2HMKW
60-69 years, male
44.2
GTEX-11PRG-0011-R4a-SM-DNZZR
50-59 years, male
44.2
GTEX-NPJ8-0011-R4a-SM-2HML3
40-49 years, male
44.1
GTEX-131YS-0011-R4a-SM-5DUVL
60-69 years, female
43.7
GTEX-1HCU6-0011-R4b-SM-ARU74
60-69 years, female
43.5
GTEX-1HB9E-0011-R4b-SM-ARZLS
50-59 years, male
43.3
GTEX-1CB4J-0011-R4b-SM-9WG5P
60-69 years, male
43.0
GTEX-13NYS-0011-R4b-SM-5MR3O
60-69 years, male
42.6
GTEX-1HFI6-0011-R4b-SM-A96RT
40-49 years, male
42.5
GTEX-1N2EE-0011-R4a-SM-EXOII
60-69 years, male
41.8
GTEX-13VXU-0011-R4b-SM-5O9CI
50-59 years, male
41.4
GTEX-1445S-0011-R4a-SM-5PNWN
60-69 years, male
41.3
GTEX-17F97-0011-R4b-SM-7KFS2
50-59 years, male
41.0
GTEX-11NUK-0011-R4a-SM-DO12B
50-59 years, male
40.2
GTEX-1H3O1-0011-R4b-SM-A9SKE
60-69 years, male
39.6
GTEX-15ER7-0011-R4a-SM-6M46S
20-29 years, female
39.5
GTEX-1A3MX-0011-R4b-SM-7EWFK
60-69 years, male
39.4
GTEX-YFC4-0011-R4a-SM-4RGLQ
40-49 years, female
39.0
GTEX-QVUS-0011-R4A-SM-3GAE7
60-69 years, female
38.8
GTEX-15EO6-0011-R4a-SM-7KUKZ
50-59 years, male
38.4
GTEX-13O3O-0011-R4b-SM-5KM3F
60-69 years, female
38.2
GTEX-13SLW-0011-R4b-SM-5S2W2
70-79 years, male
37.9
GTEX-WHSE-0011-R4A-SM-3P5ZN
20-29 years, male
37.9
GTEX-11TTK-0011-R4a-SM-DNZZU
60-69 years, female
37.8
GTEX-13X6I-0011-R4b-SM-5PNU9
60-69 years, male
37.3
GTEX-15DDE-0011-R4b-SM-7KULI
50-59 years, female
36.7
GTEX-1LVAO-0011-R4a-SM-EXURO
60-69 years, male
35.8
GTEX-1GMR8-0011-R4a-SM-9OSX1
50-59 years, female
35.5
GTEX-1H3NZ-0011-R4a-SM-CL54T
60-69 years, male
35.5
GTEX-14PN4-0011-R4a-SM-686ZT
50-59 years, male
35.4
GTEX-1AX9I-0011-R4b-SM-7EPIB
60-69 years, male
35.2
GTEX-15DCD-0011-R4a-SM-69LPB
70-79 years, female
34.7
GTEX-S7SE-0011-R4A-SM-2XCDB
50-59 years, male
34.7
GTEX-15CHQ-0011-R4a-SM-686ZX
60-69 years, male
34.3
GTEX-13OVJ-0011-R4b-SM-5P9H5
50-59 years, female
34.2
GTEX-13X6K-0011-R4b-SM-5P9HO
60-69 years, female
34.2
GTEX-14DAQ-0011-R4a-SM-5YYAI
60-69 years, female
34.2
GTEX-1IY9M-0011-R4a-SM-C1YQ2
60-69 years, male
34.2
GTEX-TSE9-0011-R4A-SM-3DB7H
60-69 years, female
33.9
GTEX-13RTJ-0011-R4b-SM-5PNX1
60-69 years, male
33.4
GTEX-QMR6-0011-R4A-SM-32PKU
50-59 years, male
33.3
GTEX-15DYW-0011-R4a-SM-6M46V
60-69 years, female
33.2
GTEX-NPJ7-0011-R4a-SM-2I3GJ
60-69 years, female
32.4
GTEX-13PVQ-0011-R4a-SM-5O9CT
50-59 years, male
31.8
GTEX-14ABY-0011-R4b-SM-5S2VN
50-59 years, male
31.6
GTEX-T6MN-0011-R4A-SM-32QPG
50-59 years, male
31.5
GTEX-ZVZQ-0011-R4b-SM-57WCZ
60-69 years, female
31.2
GTEX-1H1ZS-0011-R4b-SM-CKZO7
70-79 years, male
30.9
GTEX-UTHO-0011-R4A-SM-3GIJP
60-69 years, male
30.6
GTEX-13OW5-0011-R4b-SM-5L3HS
60-69 years, male
30.5
GTEX-1EMGI-0011-R4b-SM-CJI2D
60-69 years, male
29.4
GTEX-1GN73-0011-R4b-SM-9QEIK
60-69 years, male
28.3
GTEX-NL4W-0011-R4a-SM-2I5GZ
50-59 years, male
28.1
GTEX-QDT8-0011-R4A-SM-32PKM
30-39 years, female
27.9
GTEX-WVLH-0011-R4A-SM-3MJFS
50-59 years, male
27.1
GTEX-Q2AG-0011-R4A-SM-2HMKA
40-49 years, female
25.7
GTEX-R55E-0011-R4A-SM-2TC5H
20-29 years, male
25.1
GTEX-NL3H-0011-R4a-SM-2I3GK
60-69 years, male
24.0
GTEX-OHPN-0011-R4A-SM-2I5FD
60-69 years, female
22.6
GTEX-P44H-0011-R4A-SM-2XCEW
40-49 years, male
22.5
GTEX-P44G-0011-R4A-SM-2I3FB
30-39 years, male
22.1
GTEX-X4EP-0011-R4B-SM-3P627
60-69 years, female
21.6
GTEX-QVJO-0011-R4A-SM-2S1QL
60-69 years, female
21.5
GTEX-N7MT-0011-R4a-SM-2I3G9
60-69 years, female
21.1
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AMYGDALA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
33.4
Mouse sample
Sample description
nTPM
Amygdala nTPM: 33.4
Samples: 4
Max nTPM: 48.3
Min nTPM: 27.4
Sample A
Male
28.5
Sample B
Male
29.3
Sample C
Female
48.3
Sample D
Female
27.4
AMYGDALA - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
Max subtype Expression energyi
Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.
The Human Protein Atlas project is funded
