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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
TMEM143 is not prognostic in Liver Hepatocellular Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
5.6
Number of samples
362
Samples
Sample
Description
TPM
TCGA-ED-A7PZ-01A
0 years, male, asian, stage:Stage II, alive, 6 days
40.0
TCGA-CC-A5UD-01A
0 years, male, asian, stage:Stage IIIA, dead, 304 days
19.5
TCGA-2Y-A9GU-01A
0 years, female, white, stage:Stage I, alive, 1939 days
18.4
TCGA-DD-A1EL-01A
0 years, male, black or african american, stage:Stage II, dead, 415 days
18.3
TCGA-DD-A73E-01A
0 years, male, white, stage:Stage I, alive, 44 days
16.8
TCGA-CC-A9FW-01A
0 years, male, asian, stage:Stage IIIA, alive, 248 days
16.6
TCGA-EP-A12J-01A
0 years, male, black or african american, stage:Stage I, alive, 570 days
16.0
TCGA-DD-A4NA-01A
0 years, female, white, stage:Stage IIIC, alive, 1008 days
15.7
TCGA-BC-A10Q-01A
0 years, female, white, stage:'--, dead, 1135 days
14.6
TCGA-DD-AACP-01A
0 years, male, asian, stage:Stage I, alive, 415 days
13.8
TCGA-FV-A2QQ-01A
0 years, male, white, stage:Stage I, alive, 729 days
13.6
TCGA-ED-A82E-01A
0 years, female, asian, stage:Stage IIIA, alive, 408 days
13.6
TCGA-EP-A3RK-01A
0 years, male, white, stage:Stage IIIA, alive, 363 days
13.3
TCGA-DD-A4NK-01A
0 years, female, white, stage:Stage IIIA, dead, 1210 days
13.3
TCGA-GJ-A9DB-01A
0 years, male, white, stage:Stage I, dead, 67 days
13.0
TCGA-5R-AA1C-01A
0 years, male, white, stage:Stage II, alive, 520 days
12.7
TCGA-DD-A73C-01A
0 years, female, white, stage:Stage IIIA, alive, 701 days
12.1
TCGA-DD-A4NF-01A
0 years, male, white, stage:Stage I, alive, 942 days
11.5
TCGA-DD-A118-01A
0 years, female, white, stage:Stage II, alive, 3437 days
11.5
TCGA-DD-AADD-01A
0 years, male, asian, stage:Stage I, alive, 1231 days
11.3
TCGA-G3-AAV3-01A
0 years, female, white, stage:Stage II, alive, 412 days
11.2
TCGA-DD-A39W-01A
0 years, female, white, stage:Stage III, dead, 827 days
11.1
TCGA-DD-A113-01A
0 years, female, white, stage:Stage II, alive, 2425 days
10.9
TCGA-G3-AAV2-01A
0 years, male, white, stage:Stage I, alive, 372 days
10.9
TCGA-DD-AAEE-01A
0 years, male, asian, stage:Stage I, alive, 810 days
10.7
TCGA-5C-A9VG-01A
0 years, male, white, stage:Stage II, alive, 328 days
10.6
TCGA-G3-A5SL-01A
0 years, male, white, stage:Stage II, alive, 621 days
10.5
TCGA-2Y-A9H6-01A
0 years, female, white, stage:Stage I, alive, 357 days
10.4
TCGA-LG-A9QC-01A
0 years, male, white, stage:Stage I, alive, 425 days
10.3
TCGA-ZP-A9CV-01A
0 years, male, white, stage:'--, dead, 1088 days
10.3
TCGA-2Y-A9HA-01A
0 years, male, white, stage:Stage II, dead, 36 days
10.1
TCGA-CC-A7IH-01A
0 years, male, asian, stage:Stage IIIA, alive, 365 days
10.0
TCGA-DD-AADB-01A
0 years, male, asian, stage:Stage I, alive, 1242 days
10.0
TCGA-DD-AAD8-01A
0 years, female, asian, stage:Stage I, alive, 1219 days
10.0
TCGA-UB-A7MD-01A
0 years, male, black or african american, stage:Stage I, dead, 52 days
9.7
TCGA-FV-A496-01A
0 years, female, white, stage:Stage I, alive, 10 days
9.6
TCGA-DD-AAEG-01A
0 years, female, asian, stage:Stage I, alive, 719 days
9.5
TCGA-DD-A1EA-01A
0 years, male, asian, stage:Stage II, alive, 2415 days
9.4
TCGA-QA-A7B7-01A
0 years, male, black or african american, stage:Stage II, alive, 94 days
9.4
TCGA-CC-A7IK-01A
0 years, male, asian, stage:Stage IIIA, dead, 262 days
9.3
TCGA-G3-A6UC-01A
0 years, male, white, stage:Stage IIIB, alive, 671 days
9.2
TCGA-FV-A4ZQ-01A
0 years, male, white, stage:Stage I, alive, 12 days
9.1
TCGA-ZP-A9D0-01A
0 years, female, black or african american, stage:'--, alive, 1091 days
9.1
TCGA-MI-A75H-01A
0 years, male, white, stage:'--, alive, 747 days
9.0
TCGA-FV-A3I1-01A
0 years, female, white, stage:Stage II, dead, 247 days
9.0
TCGA-G3-A3CK-01A
0 years, male, asian, stage:Stage I, alive, 585 days
8.9
TCGA-DD-AAVY-01A
0 years, male, asian, stage:Stage IIIA, alive, 1970 days
8.9
TCGA-DD-A3A8-01A
0 years, male, white, stage:Stage II, dead, 11 days
8.8
TCGA-DD-AAC8-01A
0 years, male, asian, stage:Stage I, dead, 16 days
8.8
TCGA-DD-A11B-01A
0 years, male, white, stage:Stage I, dead, 14 days
8.7
TCGA-2Y-A9GT-01A
0 years, male, white, stage:Stage I, dead, 1624 days
8.7
TCGA-DD-A11C-01A
0 years, male, white, stage:Stage I, alive, 662 days
8.6
TCGA-XR-A8TE-01A
0 years, male, white, stage:Stage IIIA, alive, 925 days
8.5
TCGA-BC-A8YO-01A
0 years, female, white, stage:Stage IIIC, alive, 562 days
8.5
TCGA-BC-A69I-01A
0 years, male, white, stage:Stage I, alive, 387 days
8.4
TCGA-2Y-A9H3-01A
0 years, male, white, stage:Stage II, alive, 1516 days
8.3
TCGA-DD-AACW-01A
0 years, male, asian, stage:Stage I, alive, 1424 days
8.3
TCGA-KR-A7K7-01A
0 years, female, white, stage:Stage II, alive, 951 days
8.2
TCGA-DD-A39V-01A
0 years, male, white, stage:Stage II, dead, 643 days
8.2
TCGA-2Y-A9H8-01A
0 years, female, white, stage:'--, dead, 633 days
8.2
TCGA-ZS-A9CG-01A
0 years, male, white, stage:Stage II, alive, 341 days
8.2
TCGA-G3-AAV6-01A
0 years, female, white, stage:Stage IIIA, dead, 65 days
8.2
TCGA-DD-A1EE-01A
0 years, male, white, stage:Stage IIIA, dead, 349 days
8.2
TCGA-DD-A4NV-01A
0 years, male, white, stage:Stage IIIA, alive, 2398 days
8.0
TCGA-G3-A25T-01A
0 years, female, white, stage:Stage IIIA, alive, 1553 days
8.0
TCGA-DD-AAW1-01A
0 years, male, asian, stage:Stage IIIA, alive, 1989 days
7.9
TCGA-DD-AADJ-01A
0 years, female, asian, stage:Stage I, alive, 1066 days
7.8
TCGA-KR-A7K0-01A
0 years, male, white, stage:Stage I, dead, 65 days
7.8
TCGA-XR-A8TG-01A
0 years, male, white, stage:Stage I, alive, 898 days
7.8
TCGA-RC-A6M4-01A
0 years, female, white, stage:Stage IIIA, alive, 22 days
7.8
TCGA-3K-AAZ8-01A
0 years, male, black or african american, stage:Stage IIIB, alive, 396 days
7.7
TCGA-DD-A3A9-01A
0 years, female, white, stage:Stage IVB, dead, 931 days
7.7
TCGA-BC-A10Z-01A
0 years, female, white, stage:Stage I, dead, 34 days
7.7
TCGA-DD-AAE6-01A
0 years, female, asian, stage:Stage I, alive, 141 days
7.7
TCGA-DD-A73G-01A
0 years, female, white, stage:Stage I, alive, 3478 days
7.6
TCGA-MI-A75C-01A
0 years, male, white, stage:Stage I, alive, 291 days
7.6
TCGA-DD-AAE7-01A
0 years, male, asian, stage:Stage I, alive, 644 days
7.5
TCGA-DD-AAW2-01A
0 years, male, asian, stage:Stage I, alive, 1855 days
7.4
TCGA-EP-A2KC-01A
0 years, male, black or african american, stage:Stage I, dead, 19 days
7.4
TCGA-DD-A4NP-01A
0 years, male, white, stage:Stage I, alive, 3308 days
7.3
TCGA-G3-A7M8-01A
0 years, male, asian, stage:Stage I, alive, 430 days
7.3
TCGA-LG-A6GG-01A
0 years, female, white, stage:Stage II, alive, 387 days
7.2
TCGA-DD-AAE9-01A
0 years, male, asian, stage:Stage I, alive, 722 days
7.1
TCGA-EP-A26S-01A
0 years, male, white, stage:Stage I, alive, 608 days
7.0
TCGA-DD-A4NS-01A
0 years, female, white, stage:Stage I, dead, 2456 days
7.0
TCGA-G3-A7M6-01A
0 years, female, white, stage:Stage I, alive, 632 days
6.9
TCGA-5R-AAAM-01A
0 years, female, white, stage:Stage II, dead, 46 days
6.9
TCGA-DD-AAD0-01A
0 years, female, asian, stage:Stage I, alive, 137 days
6.9
TCGA-ZS-A9CE-01A
0 years, female, white, stage:Stage II, alive, 1241 days
6.9
TCGA-G3-A7M5-01A
0 years, male, asian, stage:Stage I, alive, 447 days
6.8
TCGA-RG-A7D4-01A
0 years, male, black or african american, stage:Stage II, alive, 1098 days
6.8
TCGA-DD-AAEB-01A
0 years, male, asian, stage:Stage I, alive, 478 days
6.8
TCGA-DD-A11D-01A
0 years, female, white, stage:Stage I, dead, 1560 days
6.7
TCGA-2Y-A9HB-01A
0 years, male, stage:Stage I, alive, 260 days
6.7
TCGA-DD-AADG-01A
0 years, male, asian, stage:Stage IIIA, alive, 1145 days
6.7
TCGA-UB-A7MC-01A
0 years, male, white, stage:Stage IIIA, alive, 500 days
6.6
TCGA-CC-5260-01A
0 years, female, asian, stage:Stage IIIC, dead, 87 days
6.6
TCGA-DD-A4NL-01A
0 years, male, white, stage:Stage I, alive, 1711 days
6.6
TCGA-DD-A73F-01A
0 years, female, white, stage:Stage I, alive, 1085 days
6.6
TCGA-DD-A115-01A
0 years, male, white, stage:Stage IIIA, dead, 2542 days
6.5
TCGA-DD-AACT-01A
0 years, female, asian, stage:Stage I, alive, 1562 days
6.5
TCGA-CC-5264-01A
0 years, male, asian, stage:Stage IIIA, dead, 102 days
6.5
TCGA-G3-A25S-01A
0 years, male, white, stage:Stage I, dead, 416 days
6.4
TCGA-2Y-A9GV-01A
0 years, female, white, stage:Stage I, dead, 2532 days
6.4
TCGA-2Y-A9H7-01A
0 years, female, white, stage:Stage I, alive, 1168 days
6.4
TCGA-DD-A1EJ-01A
0 years, female, white, stage:Stage IIIC, dead, 1005 days
6.3
TCGA-BC-A112-01A
0 years, male, white, stage:'--, dead, 153 days
6.3
TCGA-DD-AACS-01A
0 years, male, asian, stage:Stage I, alive, 1804 days
6.3
TCGA-DD-AA3A-01A
0 years, female, white, stage:Stage I, dead, 410 days
6.2
TCGA-DD-AACG-01A
0 years, male, asian, stage:Stage II, dead, 469 days
6.2
TCGA-HP-A5N0-01A
0 years, female, stage:'--, dead, 752 days
6.2
TCGA-G3-AAV5-01A
0 years, male, white, stage:Stage II, alive, 354 days
6.1
TCGA-RC-A7SH-01A
0 years, male, asian, stage:Stage II, alive, 468 days
6.1
TCGA-G3-AAV4-01A
0 years, female, white, stage:Stage I, dead, 27 days
6.0
TCGA-DD-AAE2-01A
0 years, male, asian, stage:Stage I, alive, 638 days
6.0
TCGA-DD-A116-01A
0 years, male, asian, stage:Stage IIIA, dead, 1622 days
6.0
TCGA-FV-A23B-01A
0 years, female, white, stage:Stage II, dead, 1852 days
6.0
TCGA-DD-AAD5-01A
0 years, male, asian, stage:Stage I, alive, 1345 days
6.0
TCGA-DD-AACB-01A
0 years, female, asian, stage:Stage I, alive, 2324 days
5.9
TCGA-4R-AA8I-01A
0 years, male, white, stage:Stage II, dead, 262 days
5.9
TCGA-DD-A4NE-01A
0 years, female, white, stage:Stage IIIA, dead, 660 days
5.9
TCGA-DD-AACQ-01A
0 years, male, asian, stage:Stage II, dead, 432 days
5.9
TCGA-BC-A10R-01A
0 years, female, white, stage:'--, dead, 308 days
5.9
TCGA-ED-A97K-01A
0 years, male, asian, stage:Stage IIIA, alive, 6 days
5.9
TCGA-T1-A6J8-01A
0 years, male, white, stage:'--, alive, 23 days
5.9
TCGA-DD-AAVQ-01A
0 years, male, asian, stage:Stage I, alive, 2728 days
5.8
TCGA-RC-A7SK-01A
0 years, male, asian, stage:Stage I, alive, 472 days
5.8
TCGA-G3-A3CI-01A
0 years, male, white, stage:Stage I, alive, 180 days
5.7
TCGA-G3-AAV7-01A
0 years, male, asian, stage:Stage II, alive, 361 days
5.7
TCGA-DD-A4ND-01A
0 years, female, white, stage:Stage I, alive, 2746 days
5.7
TCGA-DD-AAW3-01A
0 years, male, asian, stage:Stage I, alive, 1633 days
5.6
TCGA-G3-AAV0-01A
0 years, male, asian, stage:Stage I, alive, 476 days
5.6
TCGA-MR-A520-01A
0 years, male, white, stage:Stage I, alive, 229 days
5.6
TCGA-DD-A3A2-01A
0 years, female, white, stage:Stage I, dead, 2131 days
5.6
TCGA-BC-A10S-01A
0 years, male, white, stage:'--, dead, 1423 days
5.5
TCGA-DD-A4NB-01A
0 years, male, white, stage:Stage I, alive, 989 days
5.5
TCGA-DD-AAEA-01A
0 years, male, asian, stage:Stage I, alive, 575 days
5.5
TCGA-DD-AACE-01A
0 years, male, asian, stage:Stage I, alive, 2184 days
5.5
TCGA-WX-AA44-01A
0 years, female, white, stage:Stage I, alive, 615 days
5.5
TCGA-ED-A7PY-01A
0 years, female, asian, stage:Stage II, alive, 390 days
5.5
TCGA-DD-AAE1-01A
0 years, male, asian, stage:Stage I, alive, 552 days
5.5
TCGA-DD-AACK-01A
0 years, male, asian, stage:Stage I, alive, 9 days
5.5
TCGA-DD-A3A4-01A
0 years, male, white, stage:Stage IIIA, dead, 612 days
5.4
TCGA-UB-A7MF-01A
0 years, male, white, stage:Stage IIIA, dead, 214 days
5.4
TCGA-BC-A3KG-01A
0 years, female, white, stage:Stage II, alive, 680 days
5.4
TCGA-ZP-A9CZ-01A
0 years, male, asian, stage:'--, alive, 706 days
5.4
TCGA-ZP-A9CY-01A
0 years, female, white, stage:'--, alive, 782 days
5.3
TCGA-G3-A3CH-01A
0 years, male, asian, stage:Stage IIIA, alive, 780 days
5.3
TCGA-BC-A10T-01A
0 years, male, white, stage:'--, dead, 837 days
5.3
TCGA-FV-A3R3-01A
0 years, female, white, stage:Stage I, dead, 366 days
5.3
TCGA-G3-A3CJ-01A
0 years, male, american indian or alaska native, stage:Stage II, alive, 594 days
5.3
TCGA-ED-A66Y-01A
0 years, female, asian, stage:Stage IIIA, dead, 296 days
5.3
TCGA-BC-A217-01A
0 years, female, white, stage:Stage II, dead, 1397 days
5.3
TCGA-ZP-A9D1-01A
0 years, female, white, stage:'--, alive, 21 days
5.3
TCGA-UB-A7MB-01A
0 years, male, white, stage:Stage II, alive, 601 days
5.3
TCGA-DD-A73A-01A
0 years, male, white, stage:Stage I, alive, 728 days
5.2
TCGA-ED-A8O5-01A
0 years, female, asian, stage:Stage IIIA, alive, 406 days
5.2
TCGA-DD-AAEH-01A
0 years, male, asian, stage:Stage I, alive, 784 days
5.1
TCGA-BC-A10W-01A
0 years, male, asian, stage:'--, dead, 91 days
5.1
TCGA-DD-AADA-01A
0 years, female, asian, stage:Stage I, alive, 1233 days
5.0
TCGA-DD-A1ED-01A
0 years, male, white, stage:Stage I, alive, 2301 days
5.0
TCGA-DD-AADC-01A
0 years, male, asian, stage:Stage I, dead, 425 days
5.0
TCGA-DD-A4NN-01A
0 years, female, white, stage:Stage I, dead, 899 days
5.0
TCGA-DD-AAVS-01A
0 years, male, asian, stage:Stage I, alive, 1823 days
5.0
TCGA-DD-A1EB-01A
0 years, female, stage:Stage I, alive, 2017 days
5.0
TCGA-O8-A75V-01A
0 years, male, stage:Stage I, alive, 538 days
5.0
TCGA-CC-A5UE-01A
0 years, male, asian, stage:Stage IIIB, dead, 272 days
5.0
TCGA-DD-AADU-01A
0 years, male, asian, stage:Stage II, alive, 554 days
5.0
TCGA-DD-AAVX-01A
0 years, male, asian, stage:Stage II, alive, 1718 days
5.0
TCGA-2Y-A9GS-01A
0 years, male, white, stage:'--, dead, 724 days
5.0
TCGA-ZP-A9D2-01A
0 years, male, white, stage:'--, dead, 765 days
4.9
TCGA-KR-A7K8-01A
0 years, male, stage:Stage I, alive, 906 days
4.9
TCGA-DD-A4NO-01A
0 years, male, white, stage:Stage I, alive, 2245 days
4.9
TCGA-5C-A9VH-01A
0 years, male, white, stage:Stage I, alive, 322 days
4.9
TCGA-ED-A459-01A
0 years, male, asian, stage:Stage II, alive, 910 days
4.9
TCGA-G3-A25V-01A
0 years, male, white, stage:Stage I, alive, 860 days
4.9
TCGA-2Y-A9H5-01A
0 years, female, white, stage:Stage I, dead, 555 days
4.9
TCGA-2Y-A9H9-01A
0 years, male, white, stage:Stage I, alive, 697 days
4.9
TCGA-G3-A25U-01A
0 years, female, asian, stage:Stage I, alive, 1636 days
4.9
TCGA-ED-A627-01A
0 years, male, white, stage:Stage I, alive, 423 days
4.9
TCGA-RC-A6M5-01A
0 years, female, white, stage:Stage IVA, alive, 15 days
4.8
TCGA-CC-A8HU-01A
0 years, female, asian, stage:Stage IIIA, dead, 344 days
4.8
TCGA-WX-AA47-01A
0 years, female, white, stage:Stage IIIA, dead, 556 days
4.8
TCGA-K7-A5RF-01A
0 years, male, white, stage:Stage I, alive, 631 days
4.8
TCGA-BC-A3KF-01A
0 years, female, white, stage:Stage I, alive, 8 days
4.8
TCGA-DD-AADV-01A
0 years, male, asian, stage:Stage I, alive, 574 days
4.8
TCGA-DD-AAVP-01A
0 years, male, asian, stage:Stage I, alive, 2752 days
4.8
TCGA-DD-A4NI-01A
0 years, male, white, stage:Stage II, alive, 816 days
4.7
TCGA-CC-A8HS-01A
0 years, male, asian, stage:Stage IIIC, dead, 300 days
4.7
TCGA-EP-A2KB-01A
0 years, female, white, stage:Stage I, dead, 596 days
4.7
TCGA-DD-A1EF-01A
0 years, female, white, stage:Stage I, dead, 394 days
4.6
TCGA-DD-A3A5-01A
0 years, female, white, stage:Stage III, dead, 3125 days
4.6
TCGA-BC-A216-01A
0 years, female, white, stage:Stage IIIA, alive, 1351 days
4.6
TCGA-XR-A8TF-01A
0 years, male, white, stage:Stage I, dead, 693 days
4.6
TCGA-LG-A9QD-01A
0 years, male, white, stage:Stage IIIA, alive, 366 days
4.6
TCGA-DD-A4NR-01A
0 years, female, white, stage:Stage I, dead, 9 days
4.6
TCGA-BC-A10U-01A
0 years, male, white, stage:'--, dead, 837 days
4.6
TCGA-ED-A7XO-01A
0 years, male, asian, stage:Stage IIIA, alive, 427 days
4.6
TCGA-BC-A69H-01A
0 years, male, white, stage:Stage II, alive, 444 days
4.6
TCGA-G3-A25Y-01A
0 years, female, asian, stage:Stage I, dead, 452 days
4.5
TCGA-DD-A3A6-01A
0 years, female, white, stage:Stage II, dead, 3258 days
4.5
TCGA-2Y-A9GX-01A
0 years, male, white, stage:Stage I, alive, 2442 days
4.5
TCGA-ED-A4XI-01A
0 years, male, asian, stage:Stage II, alive, 819 days
4.5
TCGA-DD-AAD1-01A
0 years, female, asian, stage:Stage I, alive, 564 days
4.5
TCGA-ED-A66X-01A
0 years, male, asian, stage:Stage IIIA, alive, 406 days
4.5
TCGA-DD-A3A1-01A
0 years, male, stage:Stage IIIA, dead, 233 days
4.5
TCGA-2Y-A9H2-01A
0 years, female, white, stage:Stage I, alive, 1731 days
4.4
TCGA-CC-5261-01A
0 years, male, asian, stage:Stage II, dead, 97 days
4.4
TCGA-2Y-A9GZ-01A
0 years, female, white, stage:Stage II, dead, 848 days
4.4
TCGA-DD-AADW-01A
0 years, male, asian, stage:Stage I, alive, 587 days
4.4
TCGA-CC-A5UC-01A
0 years, male, asian, stage:Stage IIIA, dead, 347 days
4.4
TCGA-DD-AAE4-01A
0 years, female, asian, stage:Stage I, alive, 608 days
4.4
TCGA-DD-AADM-01A
0 years, male, asian, stage:Stage II, dead, 12 days
4.4
TCGA-CC-A7IL-01A
0 years, male, asian, stage:Stage IIIA, dead, 278 days
4.4
TCGA-DD-AAD2-01A
0 years, male, asian, stage:Stage I, alive, 658 days
4.4
TCGA-BD-A3ER-01A
0 years, male, white, stage:Stage II, alive, 1115 days
4.4
TCGA-CC-A3MA-01A
0 years, male, asian, stage:Stage IIIA, dead, 303 days
4.3
TCGA-CC-A7IG-01A
0 years, male, asian, stage:Stage II, dead, 299 days
4.3
TCGA-DD-A1EH-01A
0 years, male, white, stage:Stage III, alive, 1495 days
4.3
TCGA-G3-A7M9-01A
0 years, male, white, stage:Stage IIIB, dead, 56 days
4.3
TCGA-BC-A10Y-01A
0 years, male, white, stage:'--, dead, 711 days
4.3
TCGA-DD-AAEK-01A
0 years, male, asian, stage:Stage II, alive, 1067 days
4.3
TCGA-DD-AACH-01A
0 years, male, asian, stage:Stage II, dead, 195 days
4.3
TCGA-DD-A4NG-01A
0 years, male, white, stage:Stage IIIA, dead, 802 days
4.3
TCGA-DD-AADP-01A
0 years, male, asian, stage:Stage I, alive, 458 days
4.3
TCGA-DD-AAW0-01A
0 years, male, asian, stage:Stage I, alive, 2015 days
4.3
TCGA-WX-AA46-01A
0 years, male, white, stage:Stage II, alive, 756 days
4.2
TCGA-ZS-A9CF-01A
0 years, male, white, stage:Stage II, alive, 2412 days
4.2
TCGA-MI-A75E-01A
0 years, male, white, stage:Stage IIIC, alive, 507 days
4.2
TCGA-DD-AACD-01A
0 years, male, asian, stage:Stage I, dead, 381 days
4.2
TCGA-DD-AAE0-01A
0 years, female, asian, stage:Stage IIIA, alive, 555 days
4.2
TCGA-CC-A3MC-01A
0 years, male, asian, stage:Stage IIIA, alive, 363 days
4.2
TCGA-UB-AA0U-01A
0 years, male, white, stage:Stage II, alive, 327 days
4.2
TCGA-DD-AAD3-01A
0 years, male, asian, stage:Stage I, alive, 1295 days
4.1
TCGA-RC-A7SB-01A
0 years, male, asian, stage:Stage II, alive, 588 days
4.1
TCGA-FV-A3R2-01A
0 years, male, white, stage:Stage I, dead, 194 days
4.1
TCGA-DD-AACN-01A
0 years, male, asian, stage:Stage I, alive, 1302 days
4.1
TCGA-DD-AACU-01A
0 years, male, asian, stage:Stage I, alive, 1567 days
4.1
TCGA-DD-A1EG-01A
0 years, male, white, stage:Stage I, dead, 1372 days
4.1
TCGA-G3-AAV1-01A
0 years, male, asian, stage:Stage IIIC, dead, 359 days
4.0
TCGA-KR-A7K2-01A
0 years, male, white, stage:Stage I, alive, 829 days
4.0
TCGA-2Y-A9H4-01A
0 years, male, black or african american, stage:Stage I, alive, 1452 days
4.0
TCGA-K7-A6G5-01A
0 years, male, white, stage:Stage I, alive, 512 days
3.9
TCGA-DD-AAVR-01A
0 years, male, asian, stage:Stage I, alive, 2513 days
3.9
TCGA-CC-A1HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 101 days
3.9
TCGA-DD-AACC-01A
0 years, male, asian, stage:Stage I, dead, 1685 days
3.9
TCGA-K7-A5RG-01A
0 years, male, black or african american, stage:Stage I, alive, 519 days
3.9
TCGA-G3-A5SM-01A
0 years, male, white, stage:Stage II, alive, 520 days
3.9
TCGA-XR-A8TC-01A
0 years, female, white, stage:Stage I, alive, 1339 days
3.8
TCGA-DD-AACJ-01A
0 years, male, asian, stage:Stage II, alive, 2102 days
3.8
TCGA-WQ-AB4B-01A
0 years, male, white, stage:Stage II, alive, 395 days
3.8
TCGA-DD-AACZ-01A
0 years, female, asian, stage:Stage I, dead, 171 days
3.8
TCGA-DD-A73D-01A
0 years, female, white, stage:Stage II, alive, 693 days
3.8
TCGA-BD-A3EP-01A
0 years, female, black or african american, stage:Stage I, alive, 409 days
3.8
TCGA-EP-A2KA-01A
0 years, female, white, stage:Stage IIIA, dead, 627 days
3.8
TCGA-CC-5263-01A
0 years, male, asian, stage:Stage IIIA, dead, 129 days
3.7
TCGA-MI-A75G-01A
0 years, male, white, stage:Stage II, alive, 698 days
3.7
TCGA-DD-AAVZ-01A
0 years, male, asian, stage:Stage I, alive, 1900 days
3.7
TCGA-FV-A2QR-01A
0 years, male, white, stage:Stage I, dead, 581 days
3.7
TCGA-BC-A10X-01A
0 years, female, white, stage:Stage IIIA, dead, 770 days
3.7
TCGA-BD-A2L6-01A
0 years, male, white, stage:'--, alive, 1363 days
3.7
TCGA-ED-A7XP-01A
0 years, female, asian, stage:Stage II, alive, 400 days
3.7
TCGA-CC-5262-01A
0 years, male, asian, stage:Stage IIIC, dead, 103 days
3.6
TCGA-UB-AA0V-01A
0 years, female, white, stage:Stage I, alive, 314 days
3.6
TCGA-DD-A1EI-01A
0 years, male, asian, stage:Stage I, alive, 183 days
3.6
TCGA-DD-A114-01A
0 years, male, black or african american, stage:Stage II, dead, 1149 days
3.5
TCGA-MR-A8JO-01A
0 years, male, white, stage:Stage I, alive, 330 days
3.5
TCGA-DD-AAC9-01A
0 years, male, asian, stage:Stage I, alive, 347 days
3.5
TCGA-2Y-A9GY-01A
0 years, female, white, stage:Stage II, dead, 757 days
3.5
TCGA-5R-AA1D-01A
0 years, female, white, stage:Stage IIIA, alive, 449 days
3.5
TCGA-UB-A7ME-01A
0 years, male, asian, stage:Stage I, alive, 486 days
3.5
TCGA-PD-A5DF-01A
0 years, female, white, stage:Stage IIIB, dead, 639 days
3.5
TCGA-HP-A5MZ-01A
0 years, male, stage:Stage I, dead, 91 days
3.5
TCGA-ED-A8O6-01A
0 years, female, asian, stage:Stage IIIA, dead, 56 days
3.5
TCGA-DD-A1EK-01A
0 years, female, white, stage:Stage IVB, dead, 558 days
3.5
TCGA-DD-A3A3-01A
0 years, male, asian, stage:Stage I, dead, 535 days
3.5
TCGA-CC-A7IE-01A
0 years, male, asian, stage:Stage IIIA, dead, 217 days
3.4
TCGA-DD-AADF-01A
0 years, female, asian, stage:Stage I, dead, 115 days
3.4
TCGA-DD-A73B-01A
0 years, female, white, stage:Stage I, dead, 283 days
3.4
TCGA-CC-A7IF-01A
0 years, male, asian, stage:Stage IIIA, dead, 649 days
3.4
TCGA-DD-AADK-01A
0 years, female, asian, stage:Stage II, alive, 1049 days
3.4
TCGA-FV-A495-01A
0 years, female, white, stage:Stage II, alive, 1 days
3.4
TCGA-DD-A4NJ-01A
0 years, female, white, stage:Stage II, alive, 928 days
3.4
TCGA-5C-AAPD-01A
0 years, male, asian, stage:Stage II, alive, 20 days
3.3
TCGA-CC-A7II-01A
0 years, male, asian, stage:Stage IIIA, alive, 399 days
3.3
TCGA-DD-A4NQ-01A
0 years, male, white, stage:Stage II, dead, 373 days
3.3
TCGA-G3-A7M7-01A
0 years, male, white, stage:Stage I, alive, 361 days
3.3
TCGA-CC-A8HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 140 days
3.3
TCGA-XR-A8TD-01A
0 years, female, white, stage:Stage IIIB, alive, 1030 days
3.3
TCGA-ED-A5KG-01A
0 years, female, asian, stage:Stage II, alive, 854 days
3.3
TCGA-DD-AAVV-01A
0 years, male, asian, stage:Stage II, alive, 2455 days
3.3
TCGA-NI-A8LF-01A
0 years, male, white, stage:Stage I, alive, 799 days
3.3
TCGA-YA-A8S7-01A
0 years, male, white, stage:Stage IIIA, dead, 412 days
3.2
TCGA-DD-AAVU-01A
0 years, male, asian, stage:Stage II, alive, 2202 days
3.2
TCGA-G3-A5SK-01A
0 years, male, white, stage:Stage I, alive, 744 days
3.2
TCGA-ES-A2HS-01A
0 years, male, white, stage:Stage I, dead, 688 days
3.2
TCGA-BC-A110-01A
0 years, female, black or african american, stage:'--, dead, 2116 days
3.1
TCGA-DD-A1EC-01A
0 years, female, white, stage:Stage I, alive, 602 days
3.1
TCGA-WJ-A86L-01A
0 years, female, white, stage:Stage I, alive, 345 days
3.1
TCGA-DD-A119-01A
0 years, male, asian, stage:Stage IV, dead, 223 days
3.1
TCGA-DD-AADY-01A
0 years, female, asian, stage:Stage I, alive, 555 days
3.1
TCGA-CC-5259-01A
0 years, female, asian, stage:Stage IIIC, alive, 250 days
3.1
TCGA-ZP-A9D4-01A
0 years, female, white, stage:'--, alive, 395 days
3.0
TCGA-DD-AADS-01A
0 years, male, asian, stage:Stage I, alive, 474 days
2.9
TCGA-ZS-A9CD-01A
0 years, male, white, stage:Stage II, dead, 1386 days
2.9
TCGA-CC-5258-01A
0 years, male, asian, stage:Stage II, dead, 129 days
2.9
TCGA-ED-A7PX-01A
0 years, female, asian, stage:Stage II, alive, 6 days
2.9
TCGA-GJ-A3OU-01A
0 years, male, white, stage:Stage I, alive, 879 days
2.9
TCGA-RC-A7SF-01A
0 years, male, asian, stage:Stage I, alive, 579 days
2.9
TCGA-DD-AADL-01A
0 years, male, asian, stage:Stage I, alive, 636 days
2.9
TCGA-NI-A4U2-01A
0 years, male, white, stage:Stage IIIA, dead, 1791 days
2.8
TCGA-UB-A7MA-01A
0 years, female, white, stage:Stage II, alive, 848 days
2.8
TCGA-DD-AAE3-01A
0 years, male, asian, stage:Stage I, alive, 566 days
2.8
TCGA-DD-A39Y-01A
0 years, male, asian, stage:Stage I, dead, 171 days
2.8
TCGA-CC-A9FS-01A
0 years, male, asian, stage:Stage II, alive, 211 days
2.7
TCGA-DD-AADQ-01A
0 years, male, asian, stage:Stage II, alive, 436 days
2.7
TCGA-FV-A3I0-01A
0 years, female, white, stage:Stage II, alive, 848 days
2.7
TCGA-DD-AAD6-01A
0 years, male, asian, stage:Stage IIIA, alive, 672 days
2.7
TCGA-RC-A7S9-01A
0 years, female, asian, stage:Stage I, alive, 640 days
2.7
TCGA-DD-AAED-01A
0 years, male, asian, stage:Stage I, alive, 763 days
2.7
TCGA-CC-A7IJ-01A
0 years, male, asian, stage:Stage II, alive, 382 days
2.7
TCGA-DD-AADI-01A
0 years, female, asian, stage:Stage I, alive, 1085 days
2.7
TCGA-K7-AAU7-01A
0 years, male, white, stage:Stage II, alive, 359 days
2.7
TCGA-DD-AACV-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
2.6
TCGA-FV-A4ZP-01A
0 years, male, white, stage:Stage IIIA, dead, 2486 days
2.6
TCGA-2Y-A9GW-01A
0 years, male, white, stage:Stage I, dead, 1271 days
2.6
TCGA-DD-AACO-01A
0 years, male, asian, stage:Stage I, alive, 1876 days
2.6
TCGA-DD-AAEI-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
2.6
TCGA-DD-AACL-01A
0 years, female, asian, stage:Stage I, dead, 107 days
2.6
TCGA-WQ-A9G7-01A
0 years, female, white, stage:'--, alive, 30 days
2.5
TCGA-EP-A3JL-01A
0 years, male, white, stage:Stage I, alive, 303 days
2.5
TCGA-DD-AACX-01A
0 years, male, asian, stage:Stage II, alive, 170 days
2.5
TCGA-DD-AADN-01A
0 years, male, asian, stage:Stage I, alive, 898 days
2.5
TCGA-DD-AADR-01A
0 years, male, asian, stage:Stage I, alive, 2028 days
2.4
TCGA-G3-A5SI-01A
0 years, male, asian, stage:Stage II, dead, 768 days
2.4
TCGA-G3-A3CG-01A
0 years, male, white, stage:Stage I, alive, 673 days
2.3
TCGA-CC-A3MB-01A
0 years, male, asian, stage:Stage IIIA, dead, 315 days
2.3
TCGA-RC-A6M6-01A
0 years, male, white, stage:Stage II, alive, 9 days
2.3
TCGA-2Y-A9H0-01A
0 years, male, white, stage:Stage IIIA, alive, 3675 days
2.3
TCGA-DD-A4NH-01A
0 years, female, white, stage:Stage IIIB, alive, 917 days
2.3
TCGA-CC-A123-01A
0 years, female, asian, stage:Stage IIIA, alive, 219 days
2.3
TCGA-DD-AACF-01A
0 years, male, asian, stage:Stage I, dead, 365 days
2.2
TCGA-MI-A75I-01A
0 years, male, black or african american, stage:'--, alive, 630 days
2.2
TCGA-DD-A39Z-01A
0 years, female, stage:Stage II, dead, 601 days
2.1
TCGA-BC-A5W4-01A
0 years, male, white, stage:Stage IIIA, dead, 547 days
2.1
TCGA-2Y-A9H1-01A
0 years, male, white, stage:Stage I, dead, 1229 days
2.1
TCGA-DD-A3A7-01A
0 years, male, stage:Stage IIIB, dead, 419 days
2.1
TCGA-DD-AACY-01A
0 years, male, asian, stage:Stage I, alive, 1450 days
2.1
TCGA-DD-A39X-01A
0 years, female, white, stage:Stage I, dead, 1694 days
2.1
TCGA-DD-AADO-01A
0 years, male, asian, stage:Stage I, alive, 453 days
2.1
TCGA-G3-A5SJ-01A
0 years, male, white, stage:Stage I, alive, 698 days
2.0
TCGA-CC-A8HV-01A
0 years, female, asian, stage:Stage II, dead, 279 days
2.0
TCGA-DD-AAVW-01A
0 years, male, asian, stage:Stage I, alive, 2317 days
2.0
TCGA-GJ-A6C0-01A
0 years, female, white, stage:Stage II, dead, 31 days
1.9
TCGA-G3-A25X-01A
0 years, male, asian, stage:Stage II, alive, 1779 days
1.9
TCGA-DD-AACI-01A
0 years, male, asian, stage:Stage II, alive, 1618 days
1.8
TCGA-G3-A25Z-01A
0 years, male, asian, stage:Stage I, alive, 655 days
1.7
TCGA-ES-A2HT-01A
0 years, male, black or african american, stage:Stage I, dead, 438 days
1.6
TCGA-G3-AAUZ-01A
0 years, male, stage:Stage I, alive, 480 days
1.5
TCGA-CC-A3M9-01A
0 years, male, asian, stage:Stage IIIA, dead, 300 days
1.5
TCGA-DD-AACA-01A
0 years, male, asian, stage:Stage I, alive, 2301 days
1.5
TCGA-BW-A5NO-01A
0 years, male, black or african american, stage:Stage IIIA, alive, 20 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
TMEM143 is not prognostic in Liver Hepatocellular Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
5.3
Number of samples
231
Samples
Sample
Description
TPM
DO48757
0 years, female, NA, stage:3, alive, 480 days
30.6
DO50816
0 years, male, NA, stage:2, alive, 390 days
19.0
DO45281
0 years, male, NA, stage:4, alive, 750 days
18.2
DO23532
0 years, female, NA, stage:1, alive, 960 days
16.8
DO23511
0 years, female, NA, stage:3, dead, 180 days
16.6
DO50825
0 years, male, NA, stage:2, alive, 390 days
14.4
DO45127
0 years, male, NA, stage:3, dead, 420 days
13.4
DO23539
0 years, male, NA, stage:1, alive, 1110 days
11.9
DO48737
0 years, male, NA, stage:1, alive, 720 days
11.9
DO45105
0 years, male, NA, stage:1, alive, 1680 days
11.1
DO50817
0 years, male, NA, stage:2, alive, 390 days
10.8
DO45129
0 years, male, NA, stage:3, alive, 1470 days
10.8
DO45149
0 years, female, NA, stage:2, alive, 1260 days
10.4
DO48679
0 years, male, NA, stage:2, alive, 1200 days
10.1
DO48677
0 years, male, NA, stage:3, alive, 1140 days
10.1
DO45099
0 years, male, NA, stage:3, alive, 1590 days
10.0
DO45125
0 years, male, NA, stage:3, alive, 1680 days
9.8
DO45217
0 years, female, NA, stage:3, dead, 270 days
9.6
DO23529
0 years, male, NA, stage:4, alive, 930 days
9.6
DO45241
0 years, male, NA, stage:1, alive, 1080 days
9.5
DO48717
0 years, male, NA, stage:4, dead, 180 days
9.4
DO45101
0 years, male, NA, stage:2, alive, 1680 days
9.3
DO45107
0 years, female, NA, stage:2, alive, 1710 days
9.1
DO45209
0 years, male, NA, stage:4, alive, 1350 days
8.8
DO23540
0 years, male, NA, stage:1, alive, 750 days
8.8
DO45115
0 years, male, NA, stage:2, alive, 840 days
8.8
DO23512
0 years, male, NA, stage:1, alive, 1260 days
8.7
DO45215
0 years, male, NA, stage:2, alive, 1170 days
8.5
DO48681
0 years, male, NA, stage:2, alive, 900 days
8.4
DO50793
0 years, male, NA, stage:4, alive, 540 days
8.2
DO45265
0 years, male, NA, stage:3, alive, 1020 days
8.2
DO50799
0 years, female, NA, stage:2, alive, 540 days
8.1
DO45175
0 years, male, NA, stage:2, alive, 1140 days
8.1
DO48706
0 years, male, NA, stage:2, alive, 870 days
8.0
DO50783
0 years, male, NA, stage:3, alive, 480 days
7.9
DO23516
0 years, male, NA, stage:3, dead, 20 days
7.6
DO45305
0 years, male, NA, stage:4, alive, 300 days
7.5
DO23546
0 years, male, NA, stage:2, alive, 1050 days
7.5
DO50814
0 years, male, NA, stage:3, alive, 420 days
7.4
DO45131
0 years, male, NA, stage:4, dead, 360 days
7.3
DO45169
0 years, male, NA, stage:3, alive, 1350 days
7.3
DO50813
0 years, male, NA, stage:2, alive, 420 days
7.2
DO50802
0 years, male, NA, stage:2, alive, 930 days
7.2
DO48719
0 years, male, NA, stage:2, alive, 690 days
7.1
DO23534
0 years, male, NA, stage:2, alive, 840 days
7.1
DO23547
0 years, male, NA, stage:1, alive, 1020 days
7.0
DO50822
0 years, male, NA, stage:2, alive, 510 days
7.0
DO50839
0 years, female, NA, stage:3, alive, 330 days
7.0
DO45221
0 years, female, NA, stage:4, dead, 390 days
7.0
DO45179
0 years, female, NA, stage:2, alive, 600 days
6.9
DO23533
0 years, male, NA, stage:2, alive, 900 days
6.9
DO23515
0 years, male, NA, stage:2, alive, 1230 days
6.8
DO45109
0 years, male, NA, stage:2, alive, 1590 days
6.8
DO23508
0 years, female, NA, stage:2, alive, 390 days
6.8
DO45096
0 years, male, NA, stage:2, dead, 1290 days
6.7
DO23548
0 years, female, NA, stage:1, alive, 840 days
6.7
DO50855
0 years, male, NA, stage:2, alive, 570 days
6.7
DO50845
0 years, male, NA, stage:3, alive, 210 days
6.6
DO45094
0 years, male, NA, stage:3, alive, 1650 days
6.6
DO45173
0 years, male, NA, stage:3, alive, 1170 days
6.5
DO23525
0 years, male, NA, stage:4, alive, 1050 days
6.3
DO50807
0 years, male, NA, stage:1, alive, 540 days
6.2
DO45145
0 years, male, NA, stage:3, dead, 60 days
6.1
DO45303
0 years, female, NA, stage:3, alive, 990 days
6.0
DO45159
0 years, male, NA, stage:3, alive, 1470 days
6.0
DO45111
0 years, male, NA, stage:2, alive, 1590 days
5.9
DO23543
0 years, male, NA, stage:2, alive, 1020 days
5.9
DO48751
0 years, male, NA, stage:2, dead, 480 days
5.9
DO50791
0 years, female, NA, stage:1, dead, 480 days
5.8
DO48704
0 years, female, NA, stage:3, alive, 750 days
5.8
DO45123
0 years, female, NA, stage:2, dead, 570 days
5.8
DO23521
0 years, male, NA, stage:3, alive, 1110 days
5.8
DO227643
0 years, male, NA, stage:2, alive, 1260 days
5.8
DO45113
0 years, male, NA, stage:3, alive, 1560 days
5.8
DO23526
0 years, male, NA, stage:3, alive, 1050 days
5.7
DO48693
0 years, male, NA, stage:2, alive, 900 days
5.6
DO50815
0 years, male, NA, stage:3, alive, 150 days
5.6
DO50820
0 years, female, NA, stage:3, alive, 510 days
5.6
DO45097
0 years, male, NA, stage:3, alive, 1620 days
5.5
DO50818
0 years, male, NA, stage:2, alive, 510 days
5.5
DO45227
0 years, female, NA, stage:2, alive, 1020 days
5.4
DO45255
0 years, male, NA, stage:3, alive, 720 days
5.4
DO48674
0 years, male, NA, stage:2, alive, 1260 days
5.4
DO48715
0 years, female, NA, stage:2, dead, 690 days
5.3
DO45219
0 years, male, NA, stage:2, alive, 1080 days
5.3
DO50829
0 years, male, NA, stage:3, alive, 570 days
5.3
DO48697
0 years, female, NA, stage:2, dead, 810 days
5.3
DO48728
0 years, female, NA, stage:2, alive, 150 days
5.3
DO48723
0 years, male, NA, stage:1, alive, 600 days
5.3
DO45203
0 years, female, NA, stage:2, alive, 1170 days
5.2
DO23535
0 years, male, NA, stage:1, alive, 960 days
5.2
DO45187
0 years, female, NA, stage:1, alive, 1260 days
5.2
DO50808
0 years, male, NA, stage:2, alive, 570 days
5.1
DO50809
0 years, male, NA, stage:3, dead, 720 days
4.9
DO50857
0 years, male, NA, stage:2, alive, 210 days
4.9
DO23545
0 years, male, NA, stage:2, dead, 570 days
4.9
DO45245
0 years, female, NA, stage:2, dead, 240 days
4.9
DO45095
0 years, male, NA, stage:2, alive, 1620 days
4.8
DO45133
0 years, male, NA, stage:3, dead, 660 days
4.8
DO45117
0 years, female, NA, stage:2, dead, 1110 days
4.8
DO45167
0 years, male, NA, stage:2, dead, 1440 days
4.8
DO45267
0 years, male, NA, stage:3, dead, 570 days
4.8
DO23514
0 years, male, NA, stage:2, alive, 1290 days
4.8
DO23550
0 years, male, NA, stage:1, alive, 990 days
4.8
DO45161
0 years, male, NA, stage:2, dead, 540 days
4.7
DO48721
0 years, female, NA, stage:1, alive, 900 days
4.7
DO23537
0 years, male, NA, stage:2, dead, 900 days
4.7
DO50811
0 years, male, NA, stage:1, alive, 450 days
4.7
DO45163
0 years, male, NA, stage:2, alive, 960 days
4.7
DO45283
0 years, male, NA, stage:3, alive, 510 days
4.7
DO50787
0 years, male, NA, stage:3, alive, 480 days
4.6
DO50804
0 years, male, NA, stage:2, alive, 720 days
4.6
DO48695
0 years, male, NA, stage:2, alive, 720 days
4.6
DO45153
0 years, female, NA, stage:2, alive, 1380 days
4.6
DO48716
0 years, male, NA, stage:2, alive, 720 days
4.6
DO48701
0 years, male, NA, stage:2, alive, 780 days
4.5
DO45141
0 years, male, NA, stage:2, alive, 1320 days
4.5
DO23549
0 years, male, NA, stage:3, alive, 990 days
4.5
DO48742
0 years, male, NA, stage:2, alive, 600 days
4.5
DO45229
0 years, male, NA, stage:1, alive, 990 days
4.4
DO23528
0 years, female, NA, stage:2, alive, 1020 days
4.4
DO45235
0 years, female, NA, stage:1, alive, 900 days
4.4
DO23510
0 years, female, NA, stage:2, alive, 870 days
4.4
DO48743
0 years, female, NA, stage:2, alive, 570 days
4.3
DO48760
0 years, female, NA, stage:2, alive, 690 days
4.3
DO45183
0 years, female, NA, stage:2, dead, 570 days
4.3
DO23517
0 years, male, NA, stage:2, alive, 1200 days
4.3
DO45143
0 years, male, NA, stage:3, alive, 1290 days
4.3
DO45269
0 years, male, NA, stage:3, alive, 750 days
4.2
DO45199
0 years, female, NA, stage:2, alive, 1350 days
4.2
DO23527
0 years, male, NA, stage:1, alive, 1050 days
4.2
DO50776
0 years, male, NA, stage:1, alive, 690 days
4.2
DO45223
0 years, male, NA, stage:4, alive, 1020 days
4.2
DO45171
0 years, male, NA, stage:3, alive, 600 days
4.2
DO45181
0 years, female, NA, stage:2, alive, 1200 days
4.1
DO48730
0 years, female, NA, stage:2, alive, 630 days
4.1
DO48759
0 years, male, NA, stage:3, alive, 720 days
4.1
DO45207
0 years, male, NA, stage:1, alive, 1050 days
4.1
DO23542
0 years, male, NA, stage:3, alive, 960 days
4.1
DO48700
0 years, female, NA, stage:2, alive, 810 days
4.1
DO45177
0 years, female, NA, stage:3, alive, 1260 days
4.1
DO48682
0 years, female, NA, stage:3, dead, 120 days
4.0
DO45231
0 years, male, NA, stage:2, alive, 930 days
4.0
DO45289
0 years, female, NA, stage:3, alive, 360 days
3.9
DO45091
0 years, male, NA, stage:2, dead, 1320 days
3.9
DO48746
0 years, male, NA, stage:3, alive, 570 days
3.9
DO45249
0 years, male, NA, stage:1, alive, 630 days
3.9
DO45155
0 years, male, NA, stage:2, alive, 2160 days
3.9
DO45239
0 years, male, NA, stage:2, alive, 870 days
3.9
DO45297
0 years, female, NA, stage:4, dead, 1260 days
3.9
DO45211
0 years, male, NA, stage:3, alive, 240 days
3.8
DO50819
0 years, female, NA, stage:2, alive, 510 days
3.8
DO45201
0 years, male, NA, stage:1, alive, 900 days
3.8
DO48727
0 years, female, NA, stage:2, dead, 390 days
3.8
DO48736
0 years, female, NA, stage:1, alive, 600 days
3.7
DO50803
0 years, female, NA, stage:1, alive, 540 days
3.7
DO48732
0 years, male, NA, stage:3, alive, 630 days
3.7
DO45257
0 years, male, NA, stage:3, alive, 810 days
3.7
DO48720
0 years, female, NA, stage:2, alive, 570 days
3.6
DO45273
0 years, male, NA, stage:2, alive, 480 days
3.6
DO45275
0 years, male, NA, stage:3, dead, 10 days
3.6
DO23538
0 years, male, NA, stage:2, alive, 450 days
3.6
DO23544
0 years, male, NA, stage:2, alive, 960 days
3.6
DO48725
0 years, male, NA, stage:1, alive, 780 days
3.6
DO23518
0 years, male, NA, stage:2, alive, 1320 days
3.5
DO45189
0 years, female, NA, stage:2, alive, 1200 days
3.5
DO23531
0 years, female, NA, stage:3, alive, 900 days
3.5
DO45193
0 years, female, NA, stage:4, dead, 120 days
3.5
DO227801
0 years, female, NA, stage:1, alive, 660 days
3.5
DO23541
0 years, male, NA, stage:2, alive, 930 days
3.4
DO45263
0 years, male, NA, stage:3, dead, 270 days
3.4
DO45137
0 years, male, NA, stage:1, alive, 1320 days
3.4
DO45119
0 years, male, NA, stage:3, dead, 510 days
3.3
DO45243
0 years, female, NA, stage:3, alive, 930 days
3.3
DO50778
0 years, male, NA, stage:4, alive, 630 days
3.3
DO45253
0 years, male, NA, stage:2, alive, 870 days
3.3
DO50800
0 years, male, NA, stage:2, alive, 510 days
3.3
DO23536
0 years, male, NA, stage:2, alive, 930 days
3.2
DO45233
0 years, male, NA, stage:3, alive, 900 days
3.2
DO50798
0 years, male, NA, stage:3, dead, 30 days
3.2
DO45092
0 years, male, NA, stage:4, dead, 1200 days
3.2
DO50789
0 years, female, NA, stage:2, alive, 570 days
3.1
DO45185
0 years, male, NA, stage:2, alive, 600 days
3.1
DO23513
0 years, male, NA, stage:3, alive, 1200 days
3.1
DO23519
0 years, male, NA, stage:3, alive, 630 days
3.1
DO45197
0 years, male, NA, stage:2, alive, 1170 days
3.1
DO45157
0 years, male, NA, stage:2, alive, 1980 days
3.0
DO48672
0 years, male, NA, stage:2, alive, 450 days
3.0
DO45121
0 years, male, NA, stage:3, alive, 1530 days
3.0
DO45205
0 years, female, NA, stage:2, dead, 90 days
2.9
DO23509
0 years, male, NA, stage:3, dead, 780 days
2.9
DO48733
0 years, male, NA, stage:2, alive, 600 days
2.9
DO45225
0 years, male, NA, stage:1, alive, 1050 days
2.9
DO48761
0 years, male, NA, stage:2, alive, 870 days
2.8
DO45287
0 years, male, NA, stage:1, alive, 390 days
2.8
DO48741
0 years, male, NA, stage:3, alive, 240 days
2.8
DO48747
0 years, male, NA, stage:3, alive, 540 days
2.7
DO45191
0 years, female, NA, stage:2, alive, 1200 days
2.7
DO45139
0 years, male, NA, stage:3, alive, 1320 days
2.7
DO45195
0 years, male, NA, stage:1, alive, 390 days
2.6
DO45277
0 years, male, NA, stage:3, alive, 600 days
2.6
DO50844
0 years, male, NA, stage:4, alive, 300 days
2.6
DO45299
0 years, female, NA, stage:1, alive, 1440 days
2.6
DO45103
0 years, male, NA, stage:3, alive, 450 days
2.5
DO45301
0 years, male, NA, stage:2, dead, 1440 days
2.4
DO45135
0 years, male, NA, stage:1, alive, 1410 days
2.4
DO45165
0 years, male, NA, stage:2, alive, 690 days
2.4
DO50805
0 years, male, NA, stage:2, alive, 690 days
2.4
DO48712
0 years, male, NA, stage:2, alive, 810 days
2.4
DO50832
0 years, male, NA, stage:3, alive, 90 days
2.3
DO50859
0 years, male, NA, stage:2, alive, 180 days
2.3
DO50850
0 years, male, NA, stage:3, alive, 720 days
2.3
DO23530
0 years, male, NA, stage:4, dead, 180 days
2.3
DO45213
0 years, male, NA, stage:1, alive, 1200 days
2.3
DO45279
0 years, male, NA, stage:3, alive, 1290 days
2.2
DO45237
0 years, male, NA, stage:2, alive, 900 days
2.2
DO45307
0 years, female, NA, stage:4, dead, 240 days
2.2
DO23551
0 years, male, NA, stage:3, dead, 150 days
2.2
DO50806
0 years, male, NA, stage:4, alive, 540 days
2.2
DO23524
0 years, female, NA, stage:2, alive, 1050 days
2.2
DO45259
0 years, male, NA, stage:3, alive, 330 days
2.1
DO45251
0 years, female, NA, stage:2, alive, 900 days
2.0
DO45247
0 years, female, NA, stage:2, alive, 210 days
2.0
DO50785
0 years, male, NA, stage:4, dead, 90 days
1.9
DO23523
0 years, male, NA, stage:3, alive, 1080 days
1.7
DO50840
0 years, male, NA, stage:2, alive, 330 days
1.7
DO45285
0 years, male, NA, stage:3, alive, 480 days
1.7
DO45093
0 years, male, NA, stage:2, dead, 720 days
1.5
DO50774
0 years, female, NA, stage:2, alive, 720 days
1.5
DO45261
0 years, male, NA, stage:3, alive, 990 days
1.3
DO23552
0 years, female, NA, stage:1, alive, 810 days
1.2
Show allShow less
LIVER HEPATOCELLULAR CARCINOMA - Protein relative expression (CPTAC)
Number of samples
330
Samples
Sample ID
Sample type
nRPX
967
Tumor
1.7
1027
Tumor
1.4
911
Tumor
1.4
341
Tumor
1.4
627
Tumor
1.3
695
Tumor
1.2
981
Tumor
1.2
451
Tumor
1.2
571
Tumor
1.1
1043
Tumor
1.1
635
Tumor
1.0
915
Tumor
0.9
641
Tumor
0.9
517
Tumor
0.9
665
Tumor
0.8
267
Tumor
0.7
567
Tumor
0.7
433
Tumor
0.7
713
Tumor
0.7
513
Tumor
0.7
481
Tumor
0.7
1031
Tumor
0.7
863
Tumor
0.7
558
Normal
0.7
393
Tumor
0.7
391
Tumor
0.7
426
Normal
0.7
867
Tumor
0.7
361
Tumor
0.7
414
Normal
0.7
755
Tumor
0.6
515
Tumor
0.6
132
Normal
0.6
1045
Tumor
0.6
714
Normal
0.6
141
Tumor
0.6
615
Tumor
0.6
715
Tumor
0.6
138
Normal
0.6
388
Normal
0.6
488
Normal
0.6
1041
Tumor
0.6
468
Normal
0.6
648
Normal
0.6
617
Tumor
0.6
963
Tumor
0.6
955
Tumor
0.6
924
Normal
0.6
223
Tumor
0.5
922
Normal
0.5
642
Normal
0.5
741
Tumor
0.5
873
Tumor
0.5
477
Tumor
0.5
172
Normal
0.5
464
Normal
0.5
231
Tumor
0.5
563
Tumor
0.5
428
Normal
0.5
187
Tumor
0.5
964
Normal
0.5
424
Normal
0.5
232
Normal
0.5
113
Tumor
0.5
1014
Normal
0.5
465
Tumor
0.5
1032
Normal
0.5
136
Normal
0.5
328
Normal
0.5
171
Tumor
0.5
297
Tumor
0.5
868
Normal
0.4
1022
Normal
0.4
162
Normal
0.4
452
Normal
0.4
824
Normal
0.4
912
Normal
0.4
1026
Normal
0.4
877
Tumor
0.4
818
Normal
0.4
146
Normal
0.4
744
Normal
0.4
944
Normal
0.4
344
Normal
0.4
921
Tumor
0.4
396
Normal
0.4
554
Normal
0.4
696
Normal
0.4
698
Normal
0.4
568
Normal
0.4
858
Normal
0.4
394
Normal
0.4
564
Normal
0.4
572
Normal
0.4
968
Normal
0.4
466
Normal
0.4
526
Normal
0.4
416
Normal
0.4
636
Normal
0.4
112
Tumor
0.4
358
Normal
0.4
1046
Normal
0.4
484
Normal
0.4
1015
Tumor
0.3
363
Tumor
0.3
666
Normal
0.3
975
Tumor
0.3
984
Normal
0.3
756
Normal
0.3
954
Normal
0.3
145
Tumor
0.3
557
Tumor
0.3
392
Normal
0.3
534
Normal
0.3
387
Tumor
0.3
494
Normal
0.3
448
Normal
0.3
1028
Normal
0.3
224
Normal
0.3
258
Normal
0.3
186
Normal
0.3
722
Normal
0.3
857
Tumor
0.3
982
Normal
0.3
616
Normal
0.3
412
Normal
0.3
352
Normal
0.3
716
Normal
0.3
553
Tumor
0.3
785
Tumor
0.3
127
Tumor
0.3
618
Normal
0.3
727
Tumor
0.3
938
Normal
0.3
738
Normal
0.3
354
Normal
0.3
218
Normal
0.3
148
Normal
0.3
415
Tumor
0.3
864
Normal
0.3
472
Normal
0.3
128
Normal
0.3
672
Normal
0.3
114
Normal
0.3
866
Normal
0.2
142
Normal
0.2
862
Normal
0.2
721
Tumor
0.2
356
Normal
0.2
342
Normal
0.2
482
Normal
0.2
446
Normal
0.2
278
Normal
0.2
686
Normal
0.2
661
Tumor
0.2
386
Normal
0.2
786
Normal
0.2
956
Normal
0.2
746
Normal
0.2
976
Normal
0.2
918
Normal
0.2
422
Normal
0.2
952
Normal
0.2
228
Normal
0.2
745
Tumor
0.2
261
Tumor
0.2
135
Tumor
0.2
937
Tumor
0.2
882
Normal
0.2
487
Tumor
0.2
852
Normal
0.2
664
Normal
0.2
368
Normal
0.2
298
Normal
0.2
314
Normal
0.2
124
Normal
0.2
436
Normal
0.2
728
Normal
0.2
327
Tumor
0.2
816
Normal
0.2
212
Normal
0.2
723
Tumor
0.2
364
Normal
0.2
628
Normal
0.2
514
Normal
0.2
357
Tumor
0.2
332
Normal
0.2
778
Normal
0.2
423
Tumor
0.2
188
Normal
0.1
884
Normal
0.1
362
Normal
0.1
262
Normal
0.1
1016
Normal
0.1
966
Normal
0.1
137
Tumor
0.1
227
Tumor
0.1
662
Normal
0.1
926
Normal
0.1
538
Normal
0.1
817
Tumor
0.1
474
Normal
0.1
914
Normal
0.1
284
Normal
0.1
546
Normal
0.1
492
Normal
0.1
518
Normal
0.1
978
Normal
0.1
528
Normal
0.1
185
Tumor
0.1
126
Normal
0.1
432
Normal
0.1
524
Normal
0.1
353
Tumor
0.1
111
Normal
0.1
958
Normal
0.1
647
Tumor
0.1
1025
Tumor
0.1
222
Normal
0.1
777
Tumor
0.1
874
Normal
0.0
878
Normal
0.0
473
Tumor
0.0
462
Normal
0.0
196
Normal
0.0
478
Normal
0.0
123
Tumor
0.0
445
Tumor
0.0
268
Normal
0.0
916
Normal
0.0
272
Normal
0.0
483
Tumor
0.0
312
Normal
0.0
221
Tumor
0.0
925
Tumor
0.0
913
Tumor
0.0
434
Normal
-0.1
1044
Normal
-0.1
376
Normal
-0.1
443
Tumor
-0.1
977
Tumor
-0.1
813
Tumor
-0.1
685
Tumor
-0.1
131
Tumor
-0.1
545
Tumor
-0.1
516
Normal
-0.1
277
Tumor
-0.1
444
Normal
-0.1
742
Normal
-0.1
271
Tumor
-0.1
365
Tumor
-0.1
286
Normal
-0.1
257
Tumor
-0.2
217
Tumor
-0.2
463
Tumor
-0.2
435
Tumor
-0.2
536
Normal
-0.2
743
Tumor
-0.2
1042
Normal
-0.2
214
Normal
-0.2
537
Tumor
-0.3
421
Tumor
-0.3
965
Tumor
-0.3
366
Normal
-0.3
413
Tumor
-0.3
861
Tumor
-0.3
385
Tumor
-0.3
456
Normal
-0.3
191
Tumor
-0.3
574
Normal
-0.3
431
Tumor
-0.3
737
Tumor
-0.3
147
Tumor
-0.3
671
Tumor
-0.3
161
Tumor
-0.3
343
Tumor
-0.4
195
Tumor
-0.4
425
Tumor
-0.4
491
Tumor
-0.4
983
Tumor
-0.4
923
Tumor
-0.4
192
Normal
-0.4
447
Tumor
-0.4
331
Tumor
-0.4
467
Tumor
-0.4
814
Normal
-0.4
953
Tumor
-0.5
697
Tumor
-0.5
1021
Tumor
-0.5
125
Tumor
-0.5
313
Tumor
-0.5
411
Tumor
-0.5
815
Tumor
-0.5
523
Tumor
-0.5
367
Tumor
-0.6
865
Tumor
-0.6
823
Tumor
-0.6
917
Tumor
-0.6
951
Tumor
-0.6
493
Tumor
-0.6
461
Tumor
-0.6
851
Tumor
-0.6
213
Tumor
-0.6
573
Tumor
-0.6
384
Normal
-0.6
663
Tumor
-0.7
883
Tumor
-0.7
471
Tumor
-0.7
943
Tumor
-0.7
427
Tumor
-0.7
311
Tumor
-0.7
395
Tumor
-0.7
881
Tumor
-0.7
355
Tumor
-0.8
211
Tumor
-0.8
498
Normal
-0.8
533
Tumor
-0.8
1013
Tumor
-0.8
351
Tumor
-0.8
724
Normal
-0.8
957
Tumor
-0.9
535
Tumor
-0.9
525
Tumor
-0.9
527
Tumor
-0.9
497
Tumor
-0.9
455
Tumor
-1.1
283
Tumor
-1.1
383
Tumor
-1.2
285
Tumor
-1.3
375
Tumor
-1.3
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LIVER CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.