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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
DVL3 is potential prognostic, high expression is unfavorable in Liver Hepatocellular Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
11.1
Number of samples
362
Samples
Sample
Description
TPM
TCGA-CC-A7IJ-01A
0 years, male, asian, stage:Stage II, alive, 382 days
49.0
TCGA-ZP-A9D2-01A
0 years, male, white, stage:'--, dead, 765 days
43.1
TCGA-CC-A8HS-01A
0 years, male, asian, stage:Stage IIIC, dead, 300 days
40.7
TCGA-G3-AAV7-01A
0 years, male, asian, stage:Stage II, alive, 361 days
40.6
TCGA-CC-5260-01A
0 years, female, asian, stage:Stage IIIC, dead, 87 days
35.6
TCGA-DD-A1EF-01A
0 years, female, white, stage:Stage I, dead, 394 days
35.4
TCGA-DD-AA3A-01A
0 years, female, white, stage:Stage I, dead, 410 days
34.4
TCGA-DD-AACS-01A
0 years, male, asian, stage:Stage I, alive, 1804 days
33.0
TCGA-CC-5264-01A
0 years, male, asian, stage:Stage IIIA, dead, 102 days
31.6
TCGA-G3-A7M9-01A
0 years, male, white, stage:Stage IIIB, dead, 56 days
31.4
TCGA-CC-A3MA-01A
0 years, male, asian, stage:Stage IIIA, dead, 303 days
30.1
TCGA-DD-AACW-01A
0 years, male, asian, stage:Stage I, alive, 1424 days
28.7
TCGA-DD-A114-01A
0 years, male, black or african american, stage:Stage II, dead, 1149 days
27.9
TCGA-CC-A1HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 101 days
27.5
TCGA-DD-A1EJ-01A
0 years, female, white, stage:Stage IIIC, dead, 1005 days
27.2
TCGA-CC-5263-01A
0 years, male, asian, stage:Stage IIIA, dead, 129 days
27.0
TCGA-FV-A3R2-01A
0 years, male, white, stage:Stage I, dead, 194 days
26.3
TCGA-DD-AAE1-01A
0 years, male, asian, stage:Stage I, alive, 552 days
25.8
TCGA-DD-AAVS-01A
0 years, male, asian, stage:Stage I, alive, 1823 days
25.8
TCGA-ED-A7PX-01A
0 years, female, asian, stage:Stage II, alive, 6 days
24.7
TCGA-DD-AADB-01A
0 years, male, asian, stage:Stage I, alive, 1242 days
24.5
TCGA-DD-AADD-01A
0 years, male, asian, stage:Stage I, alive, 1231 days
23.7
TCGA-DD-AACV-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
23.4
TCGA-G3-A7M6-01A
0 years, female, white, stage:Stage I, alive, 632 days
23.0
TCGA-CC-A5UD-01A
0 years, male, asian, stage:Stage IIIA, dead, 304 days
22.9
TCGA-CC-A7IK-01A
0 years, male, asian, stage:Stage IIIA, dead, 262 days
22.8
TCGA-CC-A8HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 140 days
21.9
TCGA-DD-A3A6-01A
0 years, female, white, stage:Stage II, dead, 3258 days
21.6
TCGA-CC-A8HU-01A
0 years, female, asian, stage:Stage IIIA, dead, 344 days
21.6
TCGA-DD-AADW-01A
0 years, male, asian, stage:Stage I, alive, 587 days
21.6
TCGA-DD-A4NH-01A
0 years, female, white, stage:Stage IIIB, alive, 917 days
21.2
TCGA-DD-AADC-01A
0 years, male, asian, stage:Stage I, dead, 425 days
21.0
TCGA-ED-A82E-01A
0 years, female, asian, stage:Stage IIIA, alive, 408 days
20.4
TCGA-DD-A1EH-01A
0 years, male, white, stage:Stage III, alive, 1495 days
20.3
TCGA-WX-AA44-01A
0 years, female, white, stage:Stage I, alive, 615 days
20.1
TCGA-BC-A10Q-01A
0 years, female, white, stage:'--, dead, 1135 days
20.0
TCGA-BC-A10Z-01A
0 years, female, white, stage:Stage I, dead, 34 days
20.0
TCGA-CC-5261-01A
0 years, male, asian, stage:Stage II, dead, 97 days
19.8
TCGA-CC-5258-01A
0 years, male, asian, stage:Stage II, dead, 129 days
19.6
TCGA-BC-A3KG-01A
0 years, female, white, stage:Stage II, alive, 680 days
19.6
TCGA-WJ-A86L-01A
0 years, female, white, stage:Stage I, alive, 345 days
19.6
TCGA-DD-A4NN-01A
0 years, female, white, stage:Stage I, dead, 899 days
19.6
TCGA-DD-A73E-01A
0 years, male, white, stage:Stage I, alive, 44 days
19.3
TCGA-QA-A7B7-01A
0 years, male, black or african american, stage:Stage II, alive, 94 days
19.0
TCGA-DD-A4NA-01A
0 years, female, white, stage:Stage IIIC, alive, 1008 days
18.8
TCGA-DD-AACH-01A
0 years, male, asian, stage:Stage II, dead, 195 days
18.4
TCGA-5R-AA1C-01A
0 years, male, white, stage:Stage II, alive, 520 days
18.2
TCGA-BC-A10W-01A
0 years, male, asian, stage:'--, dead, 91 days
18.2
TCGA-CC-A8HV-01A
0 years, female, asian, stage:Stage II, dead, 279 days
18.0
TCGA-UB-A7MB-01A
0 years, male, white, stage:Stage II, alive, 601 days
17.9
TCGA-CC-A3MB-01A
0 years, male, asian, stage:Stage IIIA, dead, 315 days
17.8
TCGA-DD-AACU-01A
0 years, male, asian, stage:Stage I, alive, 1567 days
17.6
TCGA-ED-A66Y-01A
0 years, female, asian, stage:Stage IIIA, dead, 296 days
17.3
TCGA-DD-AADL-01A
0 years, male, asian, stage:Stage I, alive, 636 days
17.1
TCGA-5C-A9VG-01A
0 years, male, white, stage:Stage II, alive, 328 days
17.1
TCGA-DD-AACN-01A
0 years, male, asian, stage:Stage I, alive, 1302 days
17.0
TCGA-DD-AACZ-01A
0 years, female, asian, stage:Stage I, dead, 171 days
16.9
TCGA-DD-A1EC-01A
0 years, female, white, stage:Stage I, alive, 602 days
16.8
TCGA-FV-A23B-01A
0 years, female, white, stage:Stage II, dead, 1852 days
16.8
TCGA-DD-AAD5-01A
0 years, male, asian, stage:Stage I, alive, 1345 days
16.8
TCGA-G3-A25Y-01A
0 years, female, asian, stage:Stage I, dead, 452 days
16.7
TCGA-5C-AAPD-01A
0 years, male, asian, stage:Stage II, alive, 20 days
16.5
TCGA-RC-A7SH-01A
0 years, male, asian, stage:Stage II, alive, 468 days
16.5
TCGA-BC-A8YO-01A
0 years, female, white, stage:Stage IIIC, alive, 562 days
16.5
TCGA-UB-A7MD-01A
0 years, male, black or african american, stage:Stage I, dead, 52 days
16.5
TCGA-UB-AA0U-01A
0 years, male, white, stage:Stage II, alive, 327 days
16.3
TCGA-BC-A3KF-01A
0 years, female, white, stage:Stage I, alive, 8 days
16.2
TCGA-ED-A66X-01A
0 years, male, asian, stage:Stage IIIA, alive, 406 days
16.1
TCGA-2Y-A9H2-01A
0 years, female, white, stage:Stage I, alive, 1731 days
16.1
TCGA-UB-A7MC-01A
0 years, male, white, stage:Stage IIIA, alive, 500 days
16.0
TCGA-WQ-A9G7-01A
0 years, female, white, stage:'--, alive, 30 days
15.9
TCGA-2Y-A9HA-01A
0 years, male, white, stage:Stage II, dead, 36 days
15.9
TCGA-K7-AAU7-01A
0 years, male, white, stage:Stage II, alive, 359 days
15.6
TCGA-ED-A5KG-01A
0 years, female, asian, stage:Stage II, alive, 854 days
15.6
TCGA-DD-A4NJ-01A
0 years, female, white, stage:Stage II, alive, 928 days
15.4
TCGA-DD-AAD1-01A
0 years, female, asian, stage:Stage I, alive, 564 days
15.4
TCGA-CC-A7IE-01A
0 years, male, asian, stage:Stage IIIA, dead, 217 days
15.1
TCGA-DD-A4ND-01A
0 years, female, white, stage:Stage I, alive, 2746 days
15.0
TCGA-DD-AAD0-01A
0 years, female, asian, stage:Stage I, alive, 137 days
15.0
TCGA-DD-A1EI-01A
0 years, male, asian, stage:Stage I, alive, 183 days
14.9
TCGA-ZS-A9CF-01A
0 years, male, white, stage:Stage II, alive, 2412 days
14.8
TCGA-ED-A97K-01A
0 years, male, asian, stage:Stage IIIA, alive, 6 days
14.7
TCGA-EP-A12J-01A
0 years, male, black or african american, stage:Stage I, alive, 570 days
14.4
TCGA-DD-A11C-01A
0 years, male, white, stage:Stage I, alive, 662 days
14.4
TCGA-DD-A1EE-01A
0 years, male, white, stage:Stage IIIA, dead, 349 days
14.3
TCGA-CC-A3M9-01A
0 years, male, asian, stage:Stage IIIA, dead, 300 days
14.3
TCGA-2Y-A9H0-01A
0 years, male, white, stage:Stage IIIA, alive, 3675 days
14.3
TCGA-UB-A7MA-01A
0 years, female, white, stage:Stage II, alive, 848 days
14.1
TCGA-DD-A4NS-01A
0 years, female, white, stage:Stage I, dead, 2456 days
13.8
TCGA-DD-AACL-01A
0 years, female, asian, stage:Stage I, dead, 107 days
13.7
TCGA-DD-AAW0-01A
0 years, male, asian, stage:Stage I, alive, 2015 days
13.6
TCGA-DD-AACE-01A
0 years, male, asian, stage:Stage I, alive, 2184 days
13.6
TCGA-2Y-A9GS-01A
0 years, male, white, stage:'--, dead, 724 days
13.6
TCGA-DD-AACA-01A
0 years, male, asian, stage:Stage I, alive, 2301 days
13.5
TCGA-XR-A8TE-01A
0 years, male, white, stage:Stage IIIA, alive, 925 days
13.5
TCGA-DD-AAEK-01A
0 years, male, asian, stage:Stage II, alive, 1067 days
13.3
TCGA-KR-A7K8-01A
0 years, male, stage:Stage I, alive, 906 days
13.3
TCGA-FV-A3I1-01A
0 years, female, white, stage:Stage II, dead, 247 days
13.3
TCGA-FV-A3I0-01A
0 years, female, white, stage:Stage II, alive, 848 days
13.1
TCGA-DD-A4NR-01A
0 years, female, white, stage:Stage I, dead, 9 days
13.1
TCGA-GJ-A6C0-01A
0 years, female, white, stage:Stage II, dead, 31 days
13.1
TCGA-CC-A9FW-01A
0 years, male, asian, stage:Stage IIIA, alive, 248 days
13.1
TCGA-DD-A4NV-01A
0 years, male, white, stage:Stage IIIA, alive, 2398 days
13.0
TCGA-EP-A2KB-01A
0 years, female, white, stage:Stage I, dead, 596 days
13.0
TCGA-ZP-A9CZ-01A
0 years, male, asian, stage:'--, alive, 706 days
12.9
TCGA-RG-A7D4-01A
0 years, male, black or african american, stage:Stage II, alive, 1098 days
12.9
TCGA-ED-A8O5-01A
0 years, female, asian, stage:Stage IIIA, alive, 406 days
12.8
TCGA-DD-AAVW-01A
0 years, male, asian, stage:Stage I, alive, 2317 days
12.8
TCGA-XR-A8TG-01A
0 years, male, white, stage:Stage I, alive, 898 days
12.7
TCGA-DD-AAVZ-01A
0 years, male, asian, stage:Stage I, alive, 1900 days
12.7
TCGA-DD-AACP-01A
0 years, male, asian, stage:Stage I, alive, 415 days
12.7
TCGA-RC-A6M6-01A
0 years, male, white, stage:Stage II, alive, 9 days
12.7
TCGA-CC-A7IH-01A
0 years, male, asian, stage:Stage IIIA, alive, 365 days
12.7
TCGA-BC-A10Y-01A
0 years, male, white, stage:'--, dead, 711 days
12.4
TCGA-GJ-A9DB-01A
0 years, male, white, stage:Stage I, dead, 67 days
12.4
TCGA-CC-A7IG-01A
0 years, male, asian, stage:Stage II, dead, 299 days
12.3
TCGA-DD-AADV-01A
0 years, male, asian, stage:Stage I, alive, 574 days
12.2
TCGA-ED-A7XO-01A
0 years, male, asian, stage:Stage IIIA, alive, 427 days
12.2
TCGA-BC-A10U-01A
0 years, male, white, stage:'--, dead, 837 days
12.2
TCGA-2Y-A9GX-01A
0 years, male, white, stage:Stage I, alive, 2442 days
12.1
TCGA-ZP-A9D4-01A
0 years, female, white, stage:'--, alive, 395 days
11.9
TCGA-PD-A5DF-01A
0 years, female, white, stage:Stage IIIB, dead, 639 days
11.9
TCGA-BC-A112-01A
0 years, male, white, stage:'--, dead, 153 days
11.8
TCGA-DD-A3A5-01A
0 years, female, white, stage:Stage III, dead, 3125 days
11.8
TCGA-DD-AAE0-01A
0 years, female, asian, stage:Stage IIIA, alive, 555 days
11.8
TCGA-2Y-A9H7-01A
0 years, female, white, stage:Stage I, alive, 1168 days
11.7
TCGA-ED-A8O6-01A
0 years, female, asian, stage:Stage IIIA, dead, 56 days
11.7
TCGA-BC-A10T-01A
0 years, male, white, stage:'--, dead, 837 days
11.7
TCGA-DD-AAEA-01A
0 years, male, asian, stage:Stage I, alive, 575 days
11.7
TCGA-BC-A5W4-01A
0 years, male, white, stage:Stage IIIA, dead, 547 days
11.6
TCGA-DD-A115-01A
0 years, male, white, stage:Stage IIIA, dead, 2542 days
11.5
TCGA-DD-AADP-01A
0 years, male, asian, stage:Stage I, alive, 458 days
11.5
TCGA-UB-A7MF-01A
0 years, male, white, stage:Stage IIIA, dead, 214 days
11.4
TCGA-5C-A9VH-01A
0 years, male, white, stage:Stage I, alive, 322 days
11.4
TCGA-CC-A3MC-01A
0 years, male, asian, stage:Stage IIIA, alive, 363 days
11.3
TCGA-FV-A2QR-01A
0 years, male, white, stage:Stage I, dead, 581 days
11.2
TCGA-DD-AAVV-01A
0 years, male, asian, stage:Stage II, alive, 2455 days
11.2
TCGA-2Y-A9GY-01A
0 years, female, white, stage:Stage II, dead, 757 days
11.2
TCGA-DD-AAE9-01A
0 years, male, asian, stage:Stage I, alive, 722 days
11.1
TCGA-2Y-A9H5-01A
0 years, female, white, stage:Stage I, dead, 555 days
11.1
TCGA-CC-A5UC-01A
0 years, male, asian, stage:Stage IIIA, dead, 347 days
10.9
TCGA-DD-A1EA-01A
0 years, male, asian, stage:Stage II, alive, 2415 days
10.9
TCGA-GJ-A3OU-01A
0 years, male, white, stage:Stage I, alive, 879 days
10.9
TCGA-DD-AAD3-01A
0 years, male, asian, stage:Stage I, alive, 1295 days
10.9
TCGA-DD-A1EL-01A
0 years, male, black or african american, stage:Stage II, dead, 415 days
10.9
TCGA-2Y-A9H8-01A
0 years, female, white, stage:'--, dead, 633 days
10.8
TCGA-MI-A75I-01A
0 years, male, black or african american, stage:'--, alive, 630 days
10.8
TCGA-YA-A8S7-01A
0 years, male, white, stage:Stage IIIA, dead, 412 days
10.8
TCGA-DD-AAE6-01A
0 years, female, asian, stage:Stage I, alive, 141 days
10.7
TCGA-ED-A7XP-01A
0 years, female, asian, stage:Stage II, alive, 400 days
10.7
TCGA-DD-AADY-01A
0 years, female, asian, stage:Stage I, alive, 555 days
10.6
TCGA-3K-AAZ8-01A
0 years, male, black or african american, stage:Stage IIIB, alive, 396 days
10.5
TCGA-DD-A4NQ-01A
0 years, male, white, stage:Stage II, dead, 373 days
10.5
TCGA-ED-A7PZ-01A
0 years, male, asian, stage:Stage II, alive, 6 days
10.5
TCGA-CC-A9FS-01A
0 years, male, asian, stage:Stage II, alive, 211 days
10.4
TCGA-BC-A217-01A
0 years, female, white, stage:Stage II, dead, 1397 days
10.4
TCGA-DD-AAED-01A
0 years, male, asian, stage:Stage I, alive, 763 days
10.3
TCGA-DD-AAE2-01A
0 years, male, asian, stage:Stage I, alive, 638 days
10.3
TCGA-BC-A10R-01A
0 years, female, white, stage:'--, dead, 308 days
10.2
TCGA-BW-A5NO-01A
0 years, male, black or african american, stage:Stage IIIA, alive, 20 days
10.2
TCGA-ZP-A9CV-01A
0 years, male, white, stage:'--, dead, 1088 days
10.2
TCGA-DD-A11B-01A
0 years, male, white, stage:Stage I, dead, 14 days
10.1
TCGA-ED-A459-01A
0 years, male, asian, stage:Stage II, alive, 910 days
10.0
TCGA-ED-A7PY-01A
0 years, female, asian, stage:Stage II, alive, 390 days
10.0
TCGA-CC-5262-01A
0 years, male, asian, stage:Stage IIIC, dead, 103 days
9.9
TCGA-T1-A6J8-01A
0 years, male, white, stage:'--, alive, 23 days
9.9
TCGA-4R-AA8I-01A
0 years, male, white, stage:Stage II, dead, 262 days
9.9
TCGA-DD-AAC8-01A
0 years, male, asian, stage:Stage I, dead, 16 days
9.9
TCGA-XR-A8TF-01A
0 years, male, white, stage:Stage I, dead, 693 days
9.9
TCGA-BC-A216-01A
0 years, female, white, stage:Stage IIIA, alive, 1351 days
9.8
TCGA-G3-AAV6-01A
0 years, female, white, stage:Stage IIIA, dead, 65 days
9.8
TCGA-FV-A4ZQ-01A
0 years, male, white, stage:Stage I, alive, 12 days
9.8
TCGA-DD-A4NB-01A
0 years, male, white, stage:Stage I, alive, 989 days
9.8
TCGA-CC-A5UE-01A
0 years, male, asian, stage:Stage IIIB, dead, 272 days
9.7
TCGA-DD-AAVQ-01A
0 years, male, asian, stage:Stage I, alive, 2728 days
9.7
TCGA-2Y-A9GV-01A
0 years, female, white, stage:Stage I, dead, 2532 days
9.6
TCGA-ED-A627-01A
0 years, male, white, stage:Stage I, alive, 423 days
9.6
TCGA-FV-A3R3-01A
0 years, female, white, stage:Stage I, dead, 366 days
9.6
TCGA-DD-A1EB-01A
0 years, female, stage:Stage I, alive, 2017 days
9.6
TCGA-RC-A7SB-01A
0 years, male, asian, stage:Stage II, alive, 588 days
9.5
TCGA-DD-A73F-01A
0 years, female, white, stage:Stage I, alive, 1085 days
9.5
TCGA-DD-A113-01A
0 years, female, white, stage:Stage II, alive, 2425 days
9.4
TCGA-G3-A5SJ-01A
0 years, male, white, stage:Stage I, alive, 698 days
9.4
TCGA-DD-AAD6-01A
0 years, male, asian, stage:Stage IIIA, alive, 672 days
9.3
TCGA-DD-AAVY-01A
0 years, male, asian, stage:Stage IIIA, alive, 1970 days
9.3
TCGA-XR-A8TD-01A
0 years, female, white, stage:Stage IIIB, alive, 1030 days
9.1
TCGA-DD-AADG-01A
0 years, male, asian, stage:Stage IIIA, alive, 1145 days
9.1
TCGA-DD-AAVP-01A
0 years, male, asian, stage:Stage I, alive, 2752 days
9.1
TCGA-EP-A2KC-01A
0 years, male, black or african american, stage:Stage I, dead, 19 days
9.1
TCGA-DD-AAEG-01A
0 years, female, asian, stage:Stage I, alive, 719 days
9.1
TCGA-RC-A7S9-01A
0 years, female, asian, stage:Stage I, alive, 640 days
9.1
TCGA-G3-AAV4-01A
0 years, female, white, stage:Stage I, dead, 27 days
9.0
TCGA-G3-AAV1-01A
0 years, male, asian, stage:Stage IIIC, dead, 359 days
9.0
TCGA-CC-A7IF-01A
0 years, male, asian, stage:Stage IIIA, dead, 649 days
9.0
TCGA-DD-A1EK-01A
0 years, female, white, stage:Stage IVB, dead, 558 days
9.0
TCGA-G3-A6UC-01A
0 years, male, white, stage:Stage IIIB, alive, 671 days
9.0
TCGA-DD-A4NF-01A
0 years, male, white, stage:Stage I, alive, 942 days
8.9
TCGA-DD-AACK-01A
0 years, male, asian, stage:Stage I, alive, 9 days
8.9
TCGA-DD-A39Y-01A
0 years, male, asian, stage:Stage I, dead, 171 days
8.8
TCGA-DD-A118-01A
0 years, female, white, stage:Stage II, alive, 3437 days
8.6
TCGA-UB-A7ME-01A
0 years, male, asian, stage:Stage I, alive, 486 days
8.6
TCGA-RC-A7SK-01A
0 years, male, asian, stage:Stage I, alive, 472 days
8.6
TCGA-DD-A4NE-01A
0 years, female, white, stage:Stage IIIA, dead, 660 days
8.6
TCGA-G3-AAV2-01A
0 years, male, white, stage:Stage I, alive, 372 days
8.5
TCGA-DD-AAW1-01A
0 years, male, asian, stage:Stage IIIA, alive, 1989 days
8.5
TCGA-2Y-A9H6-01A
0 years, female, white, stage:Stage I, alive, 357 days
8.5
TCGA-K7-A5RG-01A
0 years, male, black or african american, stage:Stage I, alive, 519 days
8.5
TCGA-KR-A7K0-01A
0 years, male, white, stage:Stage I, dead, 65 days
8.5
TCGA-DD-AAW3-01A
0 years, male, asian, stage:Stage I, alive, 1633 days
8.4
TCGA-BD-A3EP-01A
0 years, female, black or african american, stage:Stage I, alive, 409 days
8.4
TCGA-EP-A26S-01A
0 years, male, white, stage:Stage I, alive, 608 days
8.4
TCGA-5R-AAAM-01A
0 years, female, white, stage:Stage II, dead, 46 days
8.3
TCGA-DD-AAEE-01A
0 years, male, asian, stage:Stage I, alive, 810 days
8.3
TCGA-2Y-A9GT-01A
0 years, male, white, stage:Stage I, dead, 1624 days
8.2
TCGA-G3-A3CH-01A
0 years, male, asian, stage:Stage IIIA, alive, 780 days
8.1
TCGA-2Y-A9GZ-01A
0 years, female, white, stage:Stage II, dead, 848 days
8.1
TCGA-G3-A5SI-01A
0 years, male, asian, stage:Stage II, dead, 768 days
8.1
TCGA-LG-A6GG-01A
0 years, female, white, stage:Stage II, alive, 387 days
8.1
TCGA-DD-A116-01A
0 years, male, asian, stage:Stage IIIA, dead, 1622 days
8.1
TCGA-DD-A73C-01A
0 years, female, white, stage:Stage IIIA, alive, 701 days
8.1
TCGA-ZP-A9D0-01A
0 years, female, black or african american, stage:'--, alive, 1091 days
8.0
TCGA-DD-A4NK-01A
0 years, female, white, stage:Stage IIIA, dead, 1210 days
8.0
TCGA-DD-A1EG-01A
0 years, male, white, stage:Stage I, dead, 1372 days
8.0
TCGA-DD-AACX-01A
0 years, male, asian, stage:Stage II, alive, 170 days
7.9
TCGA-G3-A25T-01A
0 years, female, white, stage:Stage IIIA, alive, 1553 days
7.8
TCGA-HP-A5N0-01A
0 years, female, stage:'--, dead, 752 days
7.7
TCGA-DD-AAD8-01A
0 years, female, asian, stage:Stage I, alive, 1219 days
7.7
TCGA-DD-A4NG-01A
0 years, male, white, stage:Stage IIIA, dead, 802 days
7.7
TCGA-G3-AAV3-01A
0 years, female, white, stage:Stage II, alive, 412 days
7.7
TCGA-DD-AAW2-01A
0 years, male, asian, stage:Stage I, alive, 1855 days
7.5
TCGA-G3-A25S-01A
0 years, male, white, stage:Stage I, dead, 416 days
7.5
TCGA-5R-AA1D-01A
0 years, female, white, stage:Stage IIIA, alive, 449 days
7.4
TCGA-DD-A39W-01A
0 years, female, white, stage:Stage III, dead, 827 days
7.4
TCGA-DD-AACQ-01A
0 years, male, asian, stage:Stage II, dead, 432 days
7.4
TCGA-G3-A3CK-01A
0 years, male, asian, stage:Stage I, alive, 585 days
7.3
TCGA-G3-AAV5-01A
0 years, male, white, stage:Stage II, alive, 354 days
7.3
TCGA-2Y-A9HB-01A
0 years, male, stage:Stage I, alive, 260 days
7.3
TCGA-DD-A3A9-01A
0 years, female, white, stage:Stage IVB, dead, 931 days
7.2
TCGA-2Y-A9GU-01A
0 years, female, white, stage:Stage I, alive, 1939 days
7.2
TCGA-XR-A8TC-01A
0 years, female, white, stage:Stage I, alive, 1339 days
7.2
TCGA-DD-AACB-01A
0 years, female, asian, stage:Stage I, alive, 2324 days
7.1
TCGA-ZP-A9D1-01A
0 years, female, white, stage:'--, alive, 21 days
7.1
TCGA-O8-A75V-01A
0 years, male, stage:Stage I, alive, 538 days
7.1
TCGA-ZS-A9CD-01A
0 years, male, white, stage:Stage II, dead, 1386 days
7.1
TCGA-DD-AAD2-01A
0 years, male, asian, stage:Stage I, alive, 658 days
7.1
TCGA-RC-A6M4-01A
0 years, female, white, stage:Stage IIIA, alive, 22 days
7.1
TCGA-EP-A3RK-01A
0 years, male, white, stage:Stage IIIA, alive, 363 days
7.0
TCGA-ED-A4XI-01A
0 years, male, asian, stage:Stage II, alive, 819 days
7.0
TCGA-DD-AADA-01A
0 years, female, asian, stage:Stage I, alive, 1233 days
7.0
TCGA-2Y-A9GW-01A
0 years, male, white, stage:Stage I, dead, 1271 days
7.0
TCGA-DD-A4NI-01A
0 years, male, white, stage:Stage II, alive, 816 days
7.0
TCGA-BC-A69H-01A
0 years, male, white, stage:Stage II, alive, 444 days
7.0
TCGA-BD-A3ER-01A
0 years, male, white, stage:Stage II, alive, 1115 days
6.9
TCGA-MR-A8JO-01A
0 years, male, white, stage:Stage I, alive, 330 days
6.9
TCGA-DD-AADJ-01A
0 years, female, asian, stage:Stage I, alive, 1066 days
6.9
TCGA-FV-A2QQ-01A
0 years, male, white, stage:Stage I, alive, 729 days
6.8
TCGA-DD-AAEI-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
6.8
TCGA-G3-A25X-01A
0 years, male, asian, stage:Stage II, alive, 1779 days
6.8
TCGA-G3-A25U-01A
0 years, female, asian, stage:Stage I, alive, 1636 days
6.8
TCGA-DD-AADR-01A
0 years, male, asian, stage:Stage I, alive, 2028 days
6.8
TCGA-DD-A3A4-01A
0 years, male, white, stage:Stage IIIA, dead, 612 days
6.8
TCGA-DD-A11D-01A
0 years, female, white, stage:Stage I, dead, 1560 days
6.7
TCGA-CC-A7IL-01A
0 years, male, asian, stage:Stage IIIA, dead, 278 days
6.7
TCGA-MI-A75G-01A
0 years, male, white, stage:Stage II, alive, 698 days
6.7
TCGA-DD-A4NO-01A
0 years, male, white, stage:Stage I, alive, 2245 days
6.7
TCGA-UB-AA0V-01A
0 years, female, white, stage:Stage I, alive, 314 days
6.7
TCGA-ZP-A9CY-01A
0 years, female, white, stage:'--, alive, 782 days
6.6
TCGA-MI-A75E-01A
0 years, male, white, stage:Stage IIIC, alive, 507 days
6.6
TCGA-DD-AADI-01A
0 years, female, asian, stage:Stage I, alive, 1085 days
6.6
TCGA-2Y-A9H4-01A
0 years, male, black or african american, stage:Stage I, alive, 1452 days
6.6
TCGA-K7-A5RF-01A
0 years, male, white, stage:Stage I, alive, 631 days
6.5
TCGA-CC-A7II-01A
0 years, male, asian, stage:Stage IIIA, alive, 399 days
6.5
TCGA-EP-A2KA-01A
0 years, female, white, stage:Stage IIIA, dead, 627 days
6.5
TCGA-ZS-A9CG-01A
0 years, male, white, stage:Stage II, alive, 341 days
6.4
TCGA-NI-A8LF-01A
0 years, male, white, stage:Stage I, alive, 799 days
6.4
TCGA-DD-A73A-01A
0 years, male, white, stage:Stage I, alive, 728 days
6.3
TCGA-MI-A75H-01A
0 years, male, white, stage:'--, alive, 747 days
6.3
TCGA-BC-A10X-01A
0 years, female, white, stage:Stage IIIA, dead, 770 days
6.3
TCGA-LG-A9QD-01A
0 years, male, white, stage:Stage IIIA, alive, 366 days
6.3
TCGA-G3-A3CG-01A
0 years, male, white, stage:Stage I, alive, 673 days
6.2
TCGA-2Y-A9H9-01A
0 years, male, white, stage:Stage I, alive, 697 days
6.2
TCGA-DD-A73D-01A
0 years, female, white, stage:Stage II, alive, 693 days
6.1
TCGA-G3-A5SL-01A
0 years, male, white, stage:Stage II, alive, 621 days
6.1
TCGA-G3-A5SM-01A
0 years, male, white, stage:Stage II, alive, 520 days
5.9
TCGA-DD-AACT-01A
0 years, female, asian, stage:Stage I, alive, 1562 days
5.8
TCGA-HP-A5MZ-01A
0 years, male, stage:Stage I, dead, 91 days
5.8
TCGA-FV-A496-01A
0 years, female, white, stage:Stage I, alive, 10 days
5.8
TCGA-DD-AADK-01A
0 years, female, asian, stage:Stage II, alive, 1049 days
5.8
TCGA-G3-A25Z-01A
0 years, male, asian, stage:Stage I, alive, 655 days
5.7
TCGA-DD-AACY-01A
0 years, male, asian, stage:Stage I, alive, 1450 days
5.7
TCGA-DD-AACC-01A
0 years, male, asian, stage:Stage I, dead, 1685 days
5.5
TCGA-MI-A75C-01A
0 years, male, white, stage:Stage I, alive, 291 days
5.5
TCGA-KR-A7K2-01A
0 years, male, white, stage:Stage I, alive, 829 days
5.5
TCGA-G3-A7M8-01A
0 years, male, asian, stage:Stage I, alive, 430 days
5.4
TCGA-RC-A6M5-01A
0 years, female, white, stage:Stage IVA, alive, 15 days
5.4
TCGA-DD-AACG-01A
0 years, male, asian, stage:Stage II, dead, 469 days
5.2
TCGA-RC-A7SF-01A
0 years, male, asian, stage:Stage I, alive, 579 days
5.2
TCGA-DD-AADF-01A
0 years, female, asian, stage:Stage I, dead, 115 days
5.2
TCGA-DD-A3A8-01A
0 years, male, white, stage:Stage II, dead, 11 days
5.2
TCGA-BC-A10S-01A
0 years, male, white, stage:'--, dead, 1423 days
5.1
TCGA-DD-AACF-01A
0 years, male, asian, stage:Stage I, dead, 365 days
5.1
TCGA-DD-A73B-01A
0 years, female, white, stage:Stage I, dead, 283 days
5.0
TCGA-DD-AAVX-01A
0 years, male, asian, stage:Stage II, alive, 1718 days
5.0
TCGA-WX-AA46-01A
0 years, male, white, stage:Stage II, alive, 756 days
4.9
TCGA-DD-A4NL-01A
0 years, male, white, stage:Stage I, alive, 1711 days
4.8
TCGA-BD-A2L6-01A
0 years, male, white, stage:'--, alive, 1363 days
4.8
TCGA-DD-AADU-01A
0 years, male, asian, stage:Stage II, alive, 554 days
4.7
TCGA-DD-AAEH-01A
0 years, male, asian, stage:Stage I, alive, 784 days
4.7
TCGA-DD-AAVR-01A
0 years, male, asian, stage:Stage I, alive, 2513 days
4.7
TCGA-MR-A520-01A
0 years, male, white, stage:Stage I, alive, 229 days
4.7
TCGA-LG-A9QC-01A
0 years, male, white, stage:Stage I, alive, 425 days
4.7
TCGA-G3-A7M7-01A
0 years, male, white, stage:Stage I, alive, 361 days
4.6
TCGA-G3-A3CI-01A
0 years, male, white, stage:Stage I, alive, 180 days
4.6
TCGA-G3-A25V-01A
0 years, male, white, stage:Stage I, alive, 860 days
4.5
TCGA-BC-A69I-01A
0 years, male, white, stage:Stage I, alive, 387 days
4.5
TCGA-KR-A7K7-01A
0 years, female, white, stage:Stage II, alive, 951 days
4.4
TCGA-ZS-A9CE-01A
0 years, female, white, stage:Stage II, alive, 1241 days
4.4
TCGA-EP-A3JL-01A
0 years, male, white, stage:Stage I, alive, 303 days
4.4
TCGA-DD-A39X-01A
0 years, female, white, stage:Stage I, dead, 1694 days
4.3
TCGA-BC-A110-01A
0 years, female, black or african american, stage:'--, dead, 2116 days
4.2
TCGA-DD-AACJ-01A
0 years, male, asian, stage:Stage II, alive, 2102 days
4.2
TCGA-DD-A1ED-01A
0 years, male, white, stage:Stage I, alive, 2301 days
4.1
TCGA-DD-AAE7-01A
0 years, male, asian, stage:Stage I, alive, 644 days
4.0
TCGA-K7-A6G5-01A
0 years, male, white, stage:Stage I, alive, 512 days
3.9
TCGA-DD-A4NP-01A
0 years, male, white, stage:Stage I, alive, 3308 days
3.8
TCGA-DD-AADQ-01A
0 years, male, asian, stage:Stage II, alive, 436 days
3.7
TCGA-WQ-AB4B-01A
0 years, male, white, stage:Stage II, alive, 395 days
3.7
TCGA-G3-A5SK-01A
0 years, male, white, stage:Stage I, alive, 744 days
3.7
TCGA-FV-A495-01A
0 years, female, white, stage:Stage II, alive, 1 days
3.6
TCGA-CC-A123-01A
0 years, female, asian, stage:Stage IIIA, alive, 219 days
3.6
TCGA-DD-AADO-01A
0 years, male, asian, stage:Stage I, alive, 453 days
3.6
TCGA-G3-A7M5-01A
0 years, male, asian, stage:Stage I, alive, 447 days
3.5
TCGA-WX-AA47-01A
0 years, female, white, stage:Stage IIIA, dead, 556 days
3.4
TCGA-DD-AADM-01A
0 years, male, asian, stage:Stage II, dead, 12 days
3.4
TCGA-DD-AADN-01A
0 years, male, asian, stage:Stage I, alive, 898 days
3.3
TCGA-DD-AAEB-01A
0 years, male, asian, stage:Stage I, alive, 478 days
3.3
TCGA-G3-AAV0-01A
0 years, male, asian, stage:Stage I, alive, 476 days
3.3
TCGA-DD-A3A1-01A
0 years, male, stage:Stage IIIA, dead, 233 days
3.2
TCGA-DD-A73G-01A
0 years, female, white, stage:Stage I, alive, 3478 days
3.1
TCGA-DD-AAVU-01A
0 years, male, asian, stage:Stage II, alive, 2202 days
3.1
TCGA-DD-A3A2-01A
0 years, female, white, stage:Stage I, dead, 2131 days
3.1
TCGA-2Y-A9H3-01A
0 years, male, white, stage:Stage II, alive, 1516 days
3.0
TCGA-DD-A39Z-01A
0 years, female, stage:Stage II, dead, 601 days
2.9
TCGA-DD-AACO-01A
0 years, male, asian, stage:Stage I, alive, 1876 days
2.9
TCGA-DD-AACI-01A
0 years, male, asian, stage:Stage II, alive, 1618 days
2.9
TCGA-NI-A4U2-01A
0 years, male, white, stage:Stage IIIA, dead, 1791 days
2.8
TCGA-G3-A3CJ-01A
0 years, male, american indian or alaska native, stage:Stage II, alive, 594 days
2.7
TCGA-DD-A3A7-01A
0 years, male, stage:Stage IIIB, dead, 419 days
2.7
TCGA-CC-5259-01A
0 years, female, asian, stage:Stage IIIC, alive, 250 days
2.6
TCGA-DD-A119-01A
0 years, male, asian, stage:Stage IV, dead, 223 days
2.6
TCGA-G3-AAUZ-01A
0 years, male, stage:Stage I, alive, 480 days
2.6
TCGA-ES-A2HT-01A
0 years, male, black or african american, stage:Stage I, dead, 438 days
2.6
TCGA-DD-A3A3-01A
0 years, male, asian, stage:Stage I, dead, 535 days
2.4
TCGA-ES-A2HS-01A
0 years, male, white, stage:Stage I, dead, 688 days
2.4
TCGA-DD-AAC9-01A
0 years, male, asian, stage:Stage I, alive, 347 days
2.4
TCGA-FV-A4ZP-01A
0 years, male, white, stage:Stage IIIA, dead, 2486 days
2.3
TCGA-DD-A39V-01A
0 years, male, white, stage:Stage II, dead, 643 days
2.3
TCGA-DD-AAE3-01A
0 years, male, asian, stage:Stage I, alive, 566 days
2.2
TCGA-DD-AAE4-01A
0 years, female, asian, stage:Stage I, alive, 608 days
1.8
TCGA-DD-AACD-01A
0 years, male, asian, stage:Stage I, dead, 381 days
1.6
TCGA-2Y-A9H1-01A
0 years, male, white, stage:Stage I, dead, 1229 days
1.5
TCGA-DD-AADS-01A
0 years, male, asian, stage:Stage I, alive, 474 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
DVL3 is not prognostic in Liver Hepatocellular Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
18.2
Number of samples
231
Samples
Sample
Description
TPM
DO45301
0 years, male, NA, stage:2, dead, 1440 days
50.7
DO45185
0 years, male, NA, stage:2, alive, 600 days
49.3
DO45283
0 years, male, NA, stage:3, alive, 510 days
49.3
DO45259
0 years, male, NA, stage:3, alive, 330 days
48.5
DO45189
0 years, female, NA, stage:2, alive, 1200 days
40.5
DO50815
0 years, male, NA, stage:3, alive, 150 days
39.3
DO45105
0 years, male, NA, stage:1, alive, 1680 days
38.0
DO45209
0 years, male, NA, stage:4, alive, 1350 days
36.9
DO45131
0 years, male, NA, stage:4, dead, 360 days
35.9
DO50820
0 years, female, NA, stage:3, alive, 510 days
35.5
DO50799
0 years, female, NA, stage:2, alive, 540 days
34.8
DO23537
0 years, male, NA, stage:2, dead, 900 days
34.1
DO45249
0 years, male, NA, stage:1, alive, 630 days
32.7
DO45127
0 years, male, NA, stage:3, dead, 420 days
32.7
DO45155
0 years, male, NA, stage:2, alive, 2160 days
32.6
DO23513
0 years, male, NA, stage:3, alive, 1200 days
32.3
DO45297
0 years, female, NA, stage:4, dead, 1260 days
32.1
DO50855
0 years, male, NA, stage:2, alive, 570 days
31.9
DO45305
0 years, male, NA, stage:4, alive, 300 days
31.7
DO23512
0 years, male, NA, stage:1, alive, 1260 days
31.3
DO45263
0 years, male, NA, stage:3, dead, 270 days
31.2
DO23547
0 years, male, NA, stage:1, alive, 1020 days
30.7
DO45205
0 years, female, NA, stage:2, dead, 90 days
30.3
DO48720
0 years, female, NA, stage:2, alive, 570 days
30.0
DO23526
0 years, male, NA, stage:3, alive, 1050 days
29.6
DO45251
0 years, female, NA, stage:2, alive, 900 days
29.3
DO23552
0 years, female, NA, stage:1, alive, 810 days
28.2
DO45303
0 years, female, NA, stage:3, alive, 990 days
28.2
DO50778
0 years, male, NA, stage:4, alive, 630 days
27.7
DO23535
0 years, male, NA, stage:1, alive, 960 days
27.6
DO23533
0 years, male, NA, stage:2, alive, 900 days
27.6
DO45193
0 years, female, NA, stage:4, dead, 120 days
27.2
DO48712
0 years, male, NA, stage:2, alive, 810 days
27.0
DO45211
0 years, male, NA, stage:3, alive, 240 days
26.3
DO48681
0 years, male, NA, stage:2, alive, 900 days
26.3
DO45219
0 years, male, NA, stage:2, alive, 1080 days
26.2
DO50845
0 years, male, NA, stage:3, alive, 210 days
26.2
DO45139
0 years, male, NA, stage:3, alive, 1320 days
26.1
DO23524
0 years, female, NA, stage:2, alive, 1050 days
25.9
DO45121
0 years, male, NA, stage:3, alive, 1530 days
25.8
DO23528
0 years, female, NA, stage:2, alive, 1020 days
25.7
DO45241
0 years, male, NA, stage:1, alive, 1080 days
25.5
DO48730
0 years, female, NA, stage:2, alive, 630 days
25.4
DO45275
0 years, male, NA, stage:3, dead, 10 days
25.4
DO50829
0 years, male, NA, stage:3, alive, 570 days
25.2
DO48732
0 years, male, NA, stage:3, alive, 630 days
24.9
DO45277
0 years, male, NA, stage:3, alive, 600 days
24.7
DO23548
0 years, female, NA, stage:1, alive, 840 days
24.6
DO45239
0 years, male, NA, stage:2, alive, 870 days
24.5
DO45217
0 years, female, NA, stage:3, dead, 270 days
24.3
DO45279
0 years, male, NA, stage:3, alive, 1290 days
24.2
DO45187
0 years, female, NA, stage:1, alive, 1260 days
24.2
DO45273
0 years, male, NA, stage:2, alive, 480 days
24.0
DO45265
0 years, male, NA, stage:3, alive, 1020 days
23.9
DO23521
0 years, male, NA, stage:3, alive, 1110 days
23.7
DO45267
0 years, male, NA, stage:3, dead, 570 days
23.2
DO48706
0 years, male, NA, stage:2, alive, 870 days
23.0
DO45093
0 years, male, NA, stage:2, dead, 720 days
22.9
DO45179
0 years, female, NA, stage:2, alive, 600 days
22.0
DO45269
0 years, male, NA, stage:3, alive, 750 days
21.8
DO48697
0 years, female, NA, stage:2, dead, 810 days
21.7
DO48728
0 years, female, NA, stage:2, alive, 150 days
21.5
DO45257
0 years, male, NA, stage:3, alive, 810 days
21.1
DO45299
0 years, female, NA, stage:1, alive, 1440 days
20.8
DO23546
0 years, male, NA, stage:2, alive, 1050 days
20.7
DO45225
0 years, male, NA, stage:1, alive, 1050 days
20.7
DO23509
0 years, male, NA, stage:3, dead, 780 days
20.6
DO45213
0 years, male, NA, stage:1, alive, 1200 days
20.6
DO23532
0 years, female, NA, stage:1, alive, 960 days
20.4
DO50806
0 years, male, NA, stage:4, alive, 540 days
20.3
DO48757
0 years, female, NA, stage:3, alive, 480 days
20.3
DO50832
0 years, male, NA, stage:3, alive, 90 days
20.1
DO23540
0 years, male, NA, stage:1, alive, 750 days
20.0
DO50791
0 years, female, NA, stage:1, dead, 480 days
19.9
DO45173
0 years, male, NA, stage:3, alive, 1170 days
19.9
DO45287
0 years, male, NA, stage:1, alive, 390 days
19.7
DO45149
0 years, female, NA, stage:2, alive, 1260 days
19.7
DO48746
0 years, male, NA, stage:3, alive, 570 days
19.6
DO45307
0 years, female, NA, stage:4, dead, 240 days
19.5
DO50798
0 years, male, NA, stage:3, dead, 30 days
19.5
DO45183
0 years, female, NA, stage:2, dead, 570 days
19.4
DO23543
0 years, male, NA, stage:2, alive, 1020 days
19.4
DO23530
0 years, male, NA, stage:4, dead, 180 days
19.3
DO23525
0 years, male, NA, stage:4, alive, 1050 days
19.1
DO48741
0 years, male, NA, stage:3, alive, 240 days
19.1
DO48736
0 years, female, NA, stage:1, alive, 600 days
18.9
DO45281
0 years, male, NA, stage:4, alive, 750 days
18.9
DO45145
0 years, male, NA, stage:3, dead, 60 days
18.8
DO45207
0 years, male, NA, stage:1, alive, 1050 days
18.8
DO45137
0 years, male, NA, stage:1, alive, 1320 days
18.5
DO45245
0 years, female, NA, stage:2, dead, 240 days
18.4
DO23549
0 years, male, NA, stage:3, alive, 990 days
18.3
DO23539
0 years, male, NA, stage:1, alive, 1110 days
18.3
DO23515
0 years, male, NA, stage:2, alive, 1230 days
18.1
DO50840
0 years, male, NA, stage:2, alive, 330 days
18.0
DO50809
0 years, male, NA, stage:3, dead, 720 days
17.8
DO48743
0 years, female, NA, stage:2, alive, 570 days
17.7
DO50800
0 years, male, NA, stage:2, alive, 510 days
17.7
DO45113
0 years, male, NA, stage:3, alive, 1560 days
17.7
DO48701
0 years, male, NA, stage:2, alive, 780 days
17.4
DO48715
0 years, female, NA, stage:2, dead, 690 days
17.3
DO45197
0 years, male, NA, stage:2, alive, 1170 days
17.2
DO48747
0 years, male, NA, stage:3, alive, 540 days
17.0
DO50802
0 years, male, NA, stage:2, alive, 930 days
16.9
DO45289
0 years, female, NA, stage:3, alive, 360 days
16.9
DO45092
0 years, male, NA, stage:4, dead, 1200 days
16.8
DO23523
0 years, male, NA, stage:3, alive, 1080 days
16.6
DO48682
0 years, female, NA, stage:3, dead, 120 days
16.5
DO23542
0 years, male, NA, stage:3, alive, 960 days
16.5
DO45231
0 years, male, NA, stage:2, alive, 930 days
16.5
DO45165
0 years, male, NA, stage:2, alive, 690 days
16.4
DO45141
0 years, male, NA, stage:2, alive, 1320 days
16.4
DO45157
0 years, male, NA, stage:2, alive, 1980 days
16.4
DO45201
0 years, male, NA, stage:1, alive, 900 days
16.4
DO50817
0 years, male, NA, stage:2, alive, 390 days
16.3
DO45161
0 years, male, NA, stage:2, dead, 540 days
16.2
DO45223
0 years, male, NA, stage:4, alive, 1020 days
15.8
DO50816
0 years, male, NA, stage:2, alive, 390 days
15.8
DO45125
0 years, male, NA, stage:3, alive, 1680 days
15.7
DO23511
0 years, female, NA, stage:3, dead, 180 days
15.7
DO23545
0 years, male, NA, stage:2, dead, 570 days
15.6
DO48717
0 years, male, NA, stage:4, dead, 180 days
15.6
DO23534
0 years, male, NA, stage:2, alive, 840 days
15.6
DO23510
0 years, female, NA, stage:2, alive, 870 days
15.5
DO45243
0 years, female, NA, stage:3, alive, 930 days
15.3
DO50811
0 years, male, NA, stage:1, alive, 450 days
15.2
DO48721
0 years, female, NA, stage:1, alive, 900 days
15.0
DO50819
0 years, female, NA, stage:2, alive, 510 days
14.9
DO50813
0 years, male, NA, stage:2, alive, 420 days
14.9
DO23544
0 years, male, NA, stage:2, alive, 960 days
14.9
DO48737
0 years, male, NA, stage:1, alive, 720 days
14.9
DO45237
0 years, male, NA, stage:2, alive, 900 days
14.9
DO48700
0 years, female, NA, stage:2, alive, 810 days
14.8
DO45153
0 years, female, NA, stage:2, alive, 1380 days
14.7
DO23529
0 years, male, NA, stage:4, alive, 930 days
14.7
DO227801
0 years, female, NA, stage:1, alive, 660 days
14.6
DO45103
0 years, male, NA, stage:3, alive, 450 days
14.4
DO45163
0 years, male, NA, stage:2, alive, 960 days
14.3
DO45115
0 years, male, NA, stage:2, alive, 840 days
14.2
DO45255
0 years, male, NA, stage:3, alive, 720 days
14.2
DO48751
0 years, male, NA, stage:2, dead, 480 days
14.1
DO48704
0 years, female, NA, stage:3, alive, 750 days
14.1
DO50850
0 years, male, NA, stage:3, alive, 720 days
14.1
DO45191
0 years, female, NA, stage:2, alive, 1200 days
14.0
DO23516
0 years, male, NA, stage:3, dead, 20 days
14.0
DO50804
0 years, male, NA, stage:2, alive, 720 days
13.9
DO50787
0 years, male, NA, stage:3, alive, 480 days
13.9
DO45101
0 years, male, NA, stage:2, alive, 1680 days
13.8
DO45111
0 years, male, NA, stage:2, alive, 1590 days
13.7
DO45233
0 years, male, NA, stage:3, alive, 900 days
13.6
DO45253
0 years, male, NA, stage:2, alive, 870 days
13.6
DO48733
0 years, male, NA, stage:2, alive, 600 days
13.5
DO50793
0 years, male, NA, stage:4, alive, 540 days
13.4
DO45159
0 years, male, NA, stage:3, alive, 1470 days
13.4
DO23518
0 years, male, NA, stage:2, alive, 1320 days
13.4
DO45099
0 years, male, NA, stage:3, alive, 1590 days
13.2
DO23536
0 years, male, NA, stage:2, alive, 930 days
13.2
DO50785
0 years, male, NA, stage:4, dead, 90 days
13.1
DO45215
0 years, male, NA, stage:2, alive, 1170 days
13.1
DO50859
0 years, male, NA, stage:2, alive, 180 days
13.0
DO23541
0 years, male, NA, stage:2, alive, 930 days
12.9
DO45247
0 years, female, NA, stage:2, alive, 210 days
12.9
DO48725
0 years, male, NA, stage:1, alive, 780 days
12.9
DO45117
0 years, female, NA, stage:2, dead, 1110 days
12.7
DO48695
0 years, male, NA, stage:2, alive, 720 days
12.6
DO48677
0 years, male, NA, stage:3, alive, 1140 days
12.6
DO45135
0 years, male, NA, stage:1, alive, 1410 days
12.6
DO45107
0 years, female, NA, stage:2, alive, 1710 days
12.5
DO45221
0 years, female, NA, stage:4, dead, 390 days
12.5
DO23517
0 years, male, NA, stage:2, alive, 1200 days
12.3
DO45119
0 years, male, NA, stage:3, dead, 510 days
12.3
DO48716
0 years, male, NA, stage:2, alive, 720 days
12.3
DO50783
0 years, male, NA, stage:3, alive, 480 days
12.2
DO45123
0 years, female, NA, stage:2, dead, 570 days
12.1
DO45235
0 years, female, NA, stage:1, alive, 900 days
12.1
DO23508
0 years, female, NA, stage:2, alive, 390 days
12.0
DO50818
0 years, male, NA, stage:2, alive, 510 days
11.8
DO48742
0 years, male, NA, stage:2, alive, 600 days
11.8
DO48727
0 years, female, NA, stage:2, dead, 390 days
11.7
DO45169
0 years, male, NA, stage:3, alive, 1350 days
11.7
DO23514
0 years, male, NA, stage:2, alive, 1290 days
11.6
DO48723
0 years, male, NA, stage:1, alive, 600 days
11.6
DO45091
0 years, male, NA, stage:2, dead, 1320 days
11.5
DO50844
0 years, male, NA, stage:4, alive, 300 days
11.3
DO45181
0 years, female, NA, stage:2, alive, 1200 days
11.2
DO23519
0 years, male, NA, stage:3, alive, 630 days
11.2
DO50789
0 years, female, NA, stage:2, alive, 570 days
11.2
DO48761
0 years, male, NA, stage:2, alive, 870 days
11.2
DO45133
0 years, male, NA, stage:3, dead, 660 days
11.2
DO50803
0 years, female, NA, stage:1, alive, 540 days
11.1
DO45199
0 years, female, NA, stage:2, alive, 1350 days
11.1
DO48693
0 years, male, NA, stage:2, alive, 900 days
11.0
DO45175
0 years, male, NA, stage:2, alive, 1140 days
11.0
DO48679
0 years, male, NA, stage:2, alive, 1200 days
11.0
DO45203
0 years, female, NA, stage:2, alive, 1170 days
10.8
DO23527
0 years, male, NA, stage:1, alive, 1050 days
10.8
DO50822
0 years, male, NA, stage:2, alive, 510 days
10.8
DO48759
0 years, male, NA, stage:3, alive, 720 days
10.7
DO45096
0 years, male, NA, stage:2, dead, 1290 days
10.7
DO45229
0 years, male, NA, stage:1, alive, 990 days
10.6
DO48719
0 years, male, NA, stage:2, alive, 690 days
10.6
DO48672
0 years, male, NA, stage:2, alive, 450 days
10.6
DO45143
0 years, male, NA, stage:3, alive, 1290 days
10.5
DO45095
0 years, male, NA, stage:2, alive, 1620 days
10.4
DO45129
0 years, male, NA, stage:3, alive, 1470 days
10.4
DO50807
0 years, male, NA, stage:1, alive, 540 days
10.3
DO45171
0 years, male, NA, stage:3, alive, 600 days
10.2
DO50805
0 years, male, NA, stage:2, alive, 690 days
10.2
DO45094
0 years, male, NA, stage:3, alive, 1650 days
10.0
DO50808
0 years, male, NA, stage:2, alive, 570 days
9.9
DO45177
0 years, female, NA, stage:3, alive, 1260 days
9.9
DO50774
0 years, female, NA, stage:2, alive, 720 days
9.8
DO45227
0 years, female, NA, stage:2, alive, 1020 days
9.7
DO50776
0 years, male, NA, stage:1, alive, 690 days
9.6
DO50857
0 years, male, NA, stage:2, alive, 210 days
9.5
DO227643
0 years, male, NA, stage:2, alive, 1260 days
9.3
DO45261
0 years, male, NA, stage:3, alive, 990 days
9.0
DO23550
0 years, male, NA, stage:1, alive, 990 days
8.9
DO23551
0 years, male, NA, stage:3, dead, 150 days
8.6
DO48760
0 years, female, NA, stage:2, alive, 690 days
8.6
DO23531
0 years, female, NA, stage:3, alive, 900 days
8.5
DO50814
0 years, male, NA, stage:3, alive, 420 days
8.1
DO50825
0 years, male, NA, stage:2, alive, 390 days
7.9
DO45097
0 years, male, NA, stage:3, alive, 1620 days
7.7
DO23538
0 years, male, NA, stage:2, alive, 450 days
7.7
DO45285
0 years, male, NA, stage:3, alive, 480 days
7.6
DO45167
0 years, male, NA, stage:2, dead, 1440 days
7.5
DO45109
0 years, male, NA, stage:2, alive, 1590 days
7.4
DO45195
0 years, male, NA, stage:1, alive, 390 days
7.2
DO50839
0 years, female, NA, stage:3, alive, 330 days
7.1
DO48674
0 years, male, NA, stage:2, alive, 1260 days
5.0
Show allShow less
LIVER HEPATOCELLULAR CARCINOMA - Protein relative expression (CPTAC)
Number of samples
330
Samples
Sample ID
Sample type
nRPX
425
Tumor
0.8
977
Tumor
0.8
545
Tumor
0.7
1041
Tumor
0.5
943
Tumor
0.5
745
Tumor
0.5
863
Tumor
0.5
721
Tumor
0.5
815
Tumor
0.5
525
Tumor
0.5
817
Tumor
0.4
868
Normal
0.4
536
Normal
0.4
743
Tumor
0.4
478
Normal
0.4
1025
Tumor
0.4
268
Normal
0.4
363
Tumor
0.4
463
Tumor
0.4
258
Normal
0.4
298
Normal
0.4
311
Tumor
0.4
262
Normal
0.4
491
Tumor
0.4
516
Normal
0.3
278
Normal
0.3
737
Tumor
0.3
444
Normal
0.3
473
Tumor
0.3
272
Normal
0.3
221
Tumor
0.3
865
Tumor
0.3
533
Tumor
0.3
741
Tumor
0.3
697
Tumor
0.3
465
Tumor
0.3
517
Tumor
0.3
777
Tumor
0.3
563
Tumor
0.3
983
Tumor
0.3
524
Normal
0.3
498
Normal
0.3
192
Normal
0.3
958
Normal
0.3
492
Normal
0.3
671
Tumor
0.3
354
Normal
0.3
878
Normal
0.3
862
Normal
0.3
232
Normal
0.3
852
Normal
0.3
1042
Normal
0.3
816
Normal
0.3
161
Tumor
0.3
713
Tumor
0.3
813
Tumor
0.3
435
Tumor
0.3
695
Tumor
0.3
628
Normal
0.3
1044
Normal
0.3
617
Tumor
0.3
968
Normal
0.3
271
Tumor
0.2
313
Tumor
0.2
231
Tumor
0.2
493
Tumor
0.2
148
Normal
0.2
746
Normal
0.2
312
Normal
0.2
1032
Normal
0.2
277
Tumor
0.2
483
Tumor
0.2
186
Normal
0.2
474
Normal
0.2
471
Tumor
0.2
447
Tumor
0.2
786
Normal
0.2
727
Tumor
0.2
956
Normal
0.2
957
Tumor
0.2
864
Normal
0.2
484
Normal
0.2
472
Normal
0.2
642
Normal
0.2
755
Tumor
0.2
412
Normal
0.2
535
Tumor
0.2
952
Normal
0.2
881
Tumor
0.2
497
Tumor
0.2
714
Normal
0.2
728
Normal
0.2
477
Tumor
0.2
857
Tumor
0.2
355
Tumor
0.2
866
Normal
0.2
385
Tumor
0.2
331
Tumor
0.2
884
Normal
0.2
261
Tumor
0.2
332
Normal
0.2
814
Normal
0.2
356
Normal
0.2
162
Normal
0.2
742
Normal
0.2
112
Tumor
0.2
686
Normal
0.2
696
Normal
0.2
785
Tumor
0.1
715
Tumor
0.1
984
Normal
0.1
443
Tumor
0.1
883
Tumor
0.1
172
Normal
0.1
466
Normal
0.1
297
Tumor
0.1
456
Normal
0.1
515
Tumor
0.1
462
Normal
0.1
823
Tumor
0.1
415
Tumor
0.1
723
Tumor
0.1
1013
Tumor
0.1
824
Normal
0.1
431
Tumor
0.1
955
Tumor
0.1
452
Normal
0.1
641
Tumor
0.1
125
Tumor
0.1
978
Normal
0.1
353
Tumor
0.1
126
Normal
0.1
138
Normal
0.1
343
Tumor
0.1
975
Tumor
0.1
188
Normal
0.1
913
Tumor
0.1
132
Normal
0.1
564
Normal
0.1
214
Normal
0.1
553
Tumor
0.1
921
Tumor
0.1
663
Tumor
0.1
574
Normal
0.1
461
Tumor
0.1
124
Normal
0.1
267
Tumor
0.1
538
Normal
0.1
874
Normal
0.1
528
Normal
0.1
568
Normal
0.1
944
Normal
0.1
523
Tumor
0.1
366
Normal
0.1
451
Tumor
0.1
481
Tumor
0.1
557
Tumor
0.1
283
Tumor
0.1
572
Normal
0.1
954
Normal
0.1
965
Tumor
0.1
616
Normal
0.1
352
Normal
0.1
914
Normal
0.1
518
Normal
0.1
111
Normal
0.1
421
Tumor
0.1
384
Normal
0.1
191
Tumor
0.1
433
Tumor
0.1
647
Tumor
0.1
648
Normal
0.1
882
Normal
0.1
413
Tumor
0.1
145
Tumor
0.1
123
Tumor
0.1
1014
Normal
0.1
513
Tumor
0.1
137
Tumor
0.1
738
Normal
0.1
376
Normal
0.1
364
Normal
0.1
937
Tumor
0.1
187
Tumor
0.1
218
Normal
0.1
195
Tumor
0.1
722
Normal
0.1
185
Tumor
0.1
142
Normal
0.1
467
Tumor
0.0
976
Normal
0.0
665
Tumor
0.0
526
Normal
0.0
527
Tumor
0.0
342
Normal
0.0
1022
Normal
0.0
558
Normal
0.0
314
Normal
0.0
666
Normal
0.0
136
Normal
0.0
636
Normal
0.0
357
Tumor
0.0
128
Normal
0.0
327
Tumor
0.0
967
Tumor
0.0
567
Tumor
0.0
1028
Normal
0.0
146
Normal
0.0
851
Tumor
0.0
778
Normal
0.0
284
Normal
0.0
383
Tumor
0.0
361
Tumor
0.0
358
Normal
0.0
1045
Tumor
0.0
131
Tumor
0.0
514
Normal
0.0
916
Normal
0.0
1026
Normal
0.0
494
Normal
0.0
436
Normal
0.0
286
Normal
N/A
344
Normal
0.0
963
Tumor
0.0
912
Normal
0.0
217
Tumor
0.0
571
Tumor
0.0
873
Tumor
0.0
818
Normal
0.0
1027
Tumor
0.0
341
Tumor
0.0
573
Tumor
0.0
464
Normal
0.0
482
Normal
0.0
858
Normal
0.0
455
Tumor
0.0
114
Normal
0.0
537
Tumor
0.0
744
Normal
0.0
414
Normal
0.0
534
Normal
0.0
487
Tumor
0.0
1021
Tumor
0.0
716
Normal
0.0
953
Tumor
0.0
135
Tumor
0.0
672
Normal
0.0
362
Normal
0.0
416
Normal
0.0
213
Tumor
0.0
982
Normal
0.0
222
Normal
0.0
938
Normal
0.0
554
Normal
0.0
171
Tumor
-0.1
434
Normal
-0.1
627
Tumor
-0.1
861
Tumor
-0.1
196
Normal
-0.1
923
Tumor
-0.1
228
Normal
-0.1
1016
Normal
-0.1
328
Normal
-0.1
411
Tumor
-0.1
664
Normal
-0.1
964
Normal
-0.1
488
Normal
-0.1
546
Normal
-0.1
685
Tumor
-0.1
756
Normal
-0.1
966
Normal
-0.1
223
Tumor
-0.1
867
Tumor
-0.1
224
Normal
-0.1
365
Tumor
-0.1
917
Tumor
-0.1
424
Normal
-0.1
724
Normal
-0.1
1015
Tumor
-0.1
468
Normal
-0.1
387
Tumor
-0.1
386
Normal
-0.1
924
Normal
-0.1
911
Tumor
-0.1
618
Normal
-0.1
212
Normal
-0.1
448
Normal
-0.1
392
Normal
-0.1
127
Tumor
-0.1
951
Tumor
-0.1
1031
Tumor
-0.1
141
Tumor
-0.1
367
Tumor
-0.1
1043
Tumor
-0.1
227
Tumor
-0.1
981
Tumor
-0.1
446
Normal
-0.1
257
Tumor
-0.1
662
Normal
-0.2
368
Normal
-0.2
432
Normal
-0.2
661
Tumor
-0.2
422
Normal
-0.2
388
Normal
-0.2
394
Normal
-0.2
396
Normal
-0.2
113
Tumor
-0.2
393
Tumor
-0.2
395
Tumor
-0.2
445
Tumor
-0.2
285
Tumor
-0.2
351
Tumor
-0.2
698
Normal
-0.2
428
Normal
-0.2
1046
Normal
-0.2
918
Normal
-0.2
615
Tumor
-0.2
426
Normal
-0.3
427
Tumor
-0.3
147
Tumor
-0.3
922
Normal
-0.3
877
Tumor
-0.3
423
Tumor
-0.3
391
Tumor
-0.3
635
Tumor
-0.4
925
Tumor
-0.4
926
Normal
-0.4
915
Tumor
-0.4
211
Tumor
-0.5
375
Tumor
-0.5
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LIVER CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
