HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Medium
RNA expressioni
Consensus:31.8 nTPM
HPA Brain:108.6 nTPM
GTEx:31.8 nTPM
FANTOM5:50.2 Scaled Tags Per Million
Pig:72.4 nTPM
Mouse:55.5 nTPM
Allen mouse:1.3 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA021238Antibody HPA062245Antibody CAB069927
Glial cells HighLowMedium
Neuronal cells HighMediumMedium







HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 108.6
Sample id Sample description nTPM
Hippocampus
nTPM: 108.6
2621 Female, age 67, right hemisphere 140.4
2529 Female, age 94, left hemisphere 105.7
1855 Male, age 76, left hemisphere 105.2
2148 Female, age 91, left hemisphere 104.4
1898 Male, age 80, left hemisphere 100.5
1911 Female, age 85, right hemisphere 95.3
Dentate gyrus
nTPM: 98.4
2530 Female, age 94, left hemisphere 116.0
2531 Female, age 67, both hemispheres 107.6
1927 Female, age 91, both hemispheres 100.9
2246 Female, age 85, both hemispheres 97.1
2010 Male, age 76, both hemispheres 94.2
2528 Male, age 74, both hemispheres 75.0
Entorhinal gyrus
nTPM: 96.2
2613 Female, age 94, left hemisphere 118.2
1787 Male, age 76, left hemisphere 108.2
1938 Female, age 85, left hemisphere 94.2
2764 Male, age 80, right hemisphere 88.0
2686 Male, age 75, right hemisphere 85.7
2117 Female, age 91, right hemisphere 82.9
Hippocampus, CA1
nTPM: 98.0
2749 Male, age 80, left hemisphere 123.0
2527 Male, age 74, both hemispheres 98.5
2045 Male, age 76, both hemispheres 92.8
1873 Female, age 85, both hemispheres 90.8
2082 Female, age 91, right hemisphere 85.0
Hippocampus, CA2
nTPM: 96.5
1963 Male, age 80, left hemisphere 128.5
2437 Female, age 94, left hemisphere 104.9
1892 Male, age 76, both hemispheres 102.3
1940 Female, age 85, left hemisphere 90.5
2113 Female, age 91, right hemisphere 81.1
2249 Male, age 74, both hemispheres 71.8
Hippocampus, CA3
nTPM: 100.5
2861 Female, age 67, both hemispheres 144.0
2137 Male, age 80, left hemisphere 114.1
2620 Female, age 94, left hemisphere 113.0
1867 Male, age 76, both hemispheres 88.9
1891 Female, age 85, both hemispheres 74.0
2436 Male, age 74, both hemispheres 68.9
Parahippocampal cortex
nTPM: 95.2
2245 Female, age 91, both hemispheres 119.1
2622 Female, age 67, right hemisphere 115.1
2692 Male, age 74, both hemispheres 103.0
2250 Female, age 67, right hemisphere 102.1
2532 Female, age 72, left hemisphere 99.0
1933 Female, age 85, both hemispheres 94.3
2693 Female, age 94, both hemispheres 90.2
1850 Male, age 80, both hemispheres 80.6
1990 Female, age 91, right hemisphere 75.3
2018 Male, age 76, both hemispheres 72.9
Perirhinal gyrus
nTPM: 100.0
2521 Female, age 94, right hemisphere 136.7
1794 Male, age 80, right hemisphere 107.5
1847 Female, age 91, left hemisphere 94.1
1841 Female, age 85, right hemisphere 81.9
2848 Male, age 76, right hemisphere 80.1
Subiculum
nTPM: 90.5
2438 Female, age 94, left hemisphere 120.5
2619 Male, age 74, both hemispheres 94.5
1901 Male, age 80, both hemispheres 87.8
2042 Male, age 76, both hemispheres 86.0
1977 Female, age 85, both hemispheres 81.9
2729 Female, age 91, right hemisphere 72.2

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 31.8
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 31.8
Samples: 197

Max nTPM: 64.3
Min nTPM: 11.0
Std nTPM: 9.9
Median nTPM: 30.9
GTEX-13FLW-0011-R1b-SM-5LZX2 50-59 years, male 64.3
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 61.3
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 60.6
GTEX-13FTY-0011-R1a-SM-5LZXE 40-49 years, female 59.4
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 57.6
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 55.6
GTEX-16YQH-0011-R1a-SM-7LT8R 30-39 years, male 53.6
GTEX-R55E-0011-R1A-SM-2TC6N 20-29 years, male 50.5
GTEX-YFC4-0011-R1a-SM-4V6EH 40-49 years, female 49.8
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 49.2
GTEX-13JUV-0011-R1a-SM-5LZY4 40-49 years, female 48.7
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 50.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 50.2
FF:10153-102I9 76 years, female 58.9
FF:10169-103B7 60 years, female 41.5

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 72.4
Pig sample Sample description nTPM
Subiculum
nTPM: 59.2
Samples: 4

Max nTPM: 75.5
Min nTPM: 51.8
Sample A Female 75.5
Sample B Female 51.8
Sample C Male 56.8
Sample D Male 52.5
Dorsal hippocampus
nTPM: 64.7
Samples: 4

Max nTPM: 78.0
Min nTPM: 53.2
Sample A Female 78.0
Sample B Female 64.7
Sample C Male 62.8
Sample D Male 53.2
Entorhinal cortex
nTPM: 72.4
Samples: 4

Max nTPM: 82.4
Min nTPM: 61.8
Sample A Female 79.1
Sample B Female 66.3
Sample C Male 82.4
Sample D Male 61.8
Ventral hippocampus
nTPM: 63.5
Samples: 4

Max nTPM: 77.9
Min nTPM: 42.2
Sample A Female 57.8
Sample B Female 42.2
Sample C Male 77.9
Sample D Male 76.1

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 55.5
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 53.1
Samples: 4

Max nTPM: 57.2
Min nTPM: 51.4
Sample A Male 51.6
Sample B Male 51.4
Sample C Female 52.1
Sample D Female 57.2
Hippocampal formation
nTPM: 55.5
Samples: 4

Max nTPM: 59.9
Min nTPM: 50.7
Sample A Male 50.7
Sample B Male 56.6
Sample C Female 59.9
Sample D Female 54.8

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 1.3
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 1.3
69530672 Antisense, RP_050421_04_C10, Mouse strain C57BL/6J (56 days, male) 1.3

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