We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
ANO10 is potential prognostic, high expression is unfavorable in Liver Hepatocellular Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
14.0
Number of samples
362
Samples
Sample
Description
TPM
TCGA-DD-A4NH-01A
0 years, female, white, stage:Stage IIIB, alive, 917 days
57.1
TCGA-DD-A1EL-01A
0 years, male, black or african american, stage:Stage II, dead, 415 days
56.7
TCGA-UB-A7MA-01A
0 years, female, white, stage:Stage II, alive, 848 days
55.9
TCGA-QA-A7B7-01A
0 years, male, black or african american, stage:Stage II, alive, 94 days
54.4
TCGA-ZP-A9D2-01A
0 years, male, white, stage:'--, dead, 765 days
53.4
TCGA-CC-A7IK-01A
0 years, male, asian, stage:Stage IIIA, dead, 262 days
51.8
TCGA-G3-AAV7-01A
0 years, male, asian, stage:Stage II, alive, 361 days
48.6
TCGA-BC-A10U-01A
0 years, male, white, stage:'--, dead, 837 days
43.1
TCGA-BC-A3KG-01A
0 years, female, white, stage:Stage II, alive, 680 days
41.6
TCGA-YA-A8S7-01A
0 years, male, white, stage:Stage IIIA, dead, 412 days
41.3
TCGA-EP-A3RK-01A
0 years, male, white, stage:Stage IIIA, alive, 363 days
37.7
TCGA-DD-A114-01A
0 years, male, black or african american, stage:Stage II, dead, 1149 days
37.4
TCGA-CC-A5UD-01A
0 years, male, asian, stage:Stage IIIA, dead, 304 days
36.2
TCGA-2Y-A9HA-01A
0 years, male, white, stage:Stage II, dead, 36 days
34.5
TCGA-CC-5262-01A
0 years, male, asian, stage:Stage IIIC, dead, 103 days
32.6
TCGA-RC-A7SH-01A
0 years, male, asian, stage:Stage II, alive, 468 days
32.6
TCGA-CC-A7IG-01A
0 years, male, asian, stage:Stage II, dead, 299 days
30.7
TCGA-2Y-A9H4-01A
0 years, male, black or african american, stage:Stage I, alive, 1452 days
30.7
TCGA-G3-A7M6-01A
0 years, female, white, stage:Stage I, alive, 632 days
30.5
TCGA-GJ-A9DB-01A
0 years, male, white, stage:Stage I, dead, 67 days
29.7
TCGA-DD-A1EI-01A
0 years, male, asian, stage:Stage I, alive, 183 days
29.4
TCGA-CC-A3M9-01A
0 years, male, asian, stage:Stage IIIA, dead, 300 days
29.1
TCGA-DD-AAE9-01A
0 years, male, asian, stage:Stage I, alive, 722 days
29.1
TCGA-ED-A7PX-01A
0 years, female, asian, stage:Stage II, alive, 6 days
29.0
TCGA-CC-A1HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 101 days
28.6
TCGA-CC-5261-01A
0 years, male, asian, stage:Stage II, dead, 97 days
27.7
TCGA-GJ-A3OU-01A
0 years, male, white, stage:Stage I, alive, 879 days
26.4
TCGA-FV-A3I1-01A
0 years, female, white, stage:Stage II, dead, 247 days
26.3
TCGA-G3-AAV2-01A
0 years, male, white, stage:Stage I, alive, 372 days
25.9
TCGA-ED-A7XP-01A
0 years, female, asian, stage:Stage II, alive, 400 days
25.8
TCGA-2Y-A9GS-01A
0 years, male, white, stage:'--, dead, 724 days
25.8
TCGA-BC-A10W-01A
0 years, male, asian, stage:'--, dead, 91 days
25.8
TCGA-CC-A8HV-01A
0 years, female, asian, stage:Stage II, dead, 279 days
25.7
TCGA-BC-A112-01A
0 years, male, white, stage:'--, dead, 153 days
25.5
TCGA-UB-A7MD-01A
0 years, male, black or african american, stage:Stage I, dead, 52 days
25.2
TCGA-FV-A3R2-01A
0 years, male, white, stage:Stage I, dead, 194 days
24.9
TCGA-FV-A2QR-01A
0 years, male, white, stage:Stage I, dead, 581 days
24.0
TCGA-DD-AACU-01A
0 years, male, asian, stage:Stage I, alive, 1567 days
23.9
TCGA-MI-A75I-01A
0 years, male, black or african american, stage:'--, alive, 630 days
23.4
TCGA-G3-A5SM-01A
0 years, male, white, stage:Stage II, alive, 520 days
23.2
TCGA-BW-A5NO-01A
0 years, male, black or african american, stage:Stage IIIA, alive, 20 days
23.1
TCGA-DD-A1EK-01A
0 years, female, white, stage:Stage IVB, dead, 558 days
22.7
TCGA-DD-AAVV-01A
0 years, male, asian, stage:Stage II, alive, 2455 days
22.6
TCGA-DD-A1EJ-01A
0 years, female, white, stage:Stage IIIC, dead, 1005 days
22.5
TCGA-CC-A3MB-01A
0 years, male, asian, stage:Stage IIIA, dead, 315 days
22.3
TCGA-CC-A7IJ-01A
0 years, male, asian, stage:Stage II, alive, 382 days
22.2
TCGA-2Y-A9H0-01A
0 years, male, white, stage:Stage IIIA, alive, 3675 days
22.1
TCGA-PD-A5DF-01A
0 years, female, white, stage:Stage IIIB, dead, 639 days
22.0
TCGA-DD-AACL-01A
0 years, female, asian, stage:Stage I, dead, 107 days
22.0
TCGA-DD-AACH-01A
0 years, male, asian, stage:Stage II, dead, 195 days
21.5
TCGA-DD-AADD-01A
0 years, male, asian, stage:Stage I, alive, 1231 days
21.1
TCGA-T1-A6J8-01A
0 years, male, white, stage:'--, alive, 23 days
21.0
TCGA-2Y-A9GX-01A
0 years, male, white, stage:Stage I, alive, 2442 days
21.0
TCGA-DD-AAC8-01A
0 years, male, asian, stage:Stage I, dead, 16 days
20.7
TCGA-DD-A1EG-01A
0 years, male, white, stage:Stage I, dead, 1372 days
20.7
TCGA-ED-A66X-01A
0 years, male, asian, stage:Stage IIIA, alive, 406 days
20.5
TCGA-DD-AADL-01A
0 years, male, asian, stage:Stage I, alive, 636 days
20.3
TCGA-BC-A217-01A
0 years, female, white, stage:Stage II, dead, 1397 days
20.1
TCGA-ZS-A9CD-01A
0 years, male, white, stage:Stage II, dead, 1386 days
20.1
TCGA-DD-AAD5-01A
0 years, male, asian, stage:Stage I, alive, 1345 days
20.0
TCGA-RC-A7SK-01A
0 years, male, asian, stage:Stage I, alive, 472 days
19.9
TCGA-DD-A3A6-01A
0 years, female, white, stage:Stage II, dead, 3258 days
19.9
TCGA-5C-A9VH-01A
0 years, male, white, stage:Stage I, alive, 322 days
19.8
TCGA-G3-A5SJ-01A
0 years, male, white, stage:Stage I, alive, 698 days
19.5
TCGA-DD-A73F-01A
0 years, female, white, stage:Stage I, alive, 1085 days
19.4
TCGA-5R-AA1C-01A
0 years, male, white, stage:Stage II, alive, 520 days
19.3
TCGA-G3-A7M8-01A
0 years, male, asian, stage:Stage I, alive, 430 days
19.2
TCGA-DD-AADB-01A
0 years, male, asian, stage:Stage I, alive, 1242 days
19.2
TCGA-K7-AAU7-01A
0 years, male, white, stage:Stage II, alive, 359 days
19.1
TCGA-MR-A520-01A
0 years, male, white, stage:Stage I, alive, 229 days
18.8
TCGA-CC-A3MC-01A
0 years, male, asian, stage:Stage IIIA, alive, 363 days
18.8
TCGA-KR-A7K8-01A
0 years, male, stage:Stage I, alive, 906 days
18.7
TCGA-XR-A8TC-01A
0 years, female, white, stage:Stage I, alive, 1339 days
18.7
TCGA-DD-AADV-01A
0 years, male, asian, stage:Stage I, alive, 574 days
18.6
TCGA-WJ-A86L-01A
0 years, female, white, stage:Stage I, alive, 345 days
18.6
TCGA-DD-AAD1-01A
0 years, female, asian, stage:Stage I, alive, 564 days
18.5
TCGA-CC-5263-01A
0 years, male, asian, stage:Stage IIIA, dead, 129 days
18.3
TCGA-DD-A39Y-01A
0 years, male, asian, stage:Stage I, dead, 171 days
18.3
TCGA-G3-A3CI-01A
0 years, male, white, stage:Stage I, alive, 180 days
18.3
TCGA-2Y-A9GY-01A
0 years, female, white, stage:Stage II, dead, 757 days
18.1
TCGA-BC-A10Z-01A
0 years, female, white, stage:Stage I, dead, 34 days
17.8
TCGA-G3-AAV1-01A
0 years, male, asian, stage:Stage IIIC, dead, 359 days
17.8
TCGA-DD-A11D-01A
0 years, female, white, stage:Stage I, dead, 1560 days
17.7
TCGA-FV-A3I0-01A
0 years, female, white, stage:Stage II, alive, 848 days
17.7
TCGA-WX-AA44-01A
0 years, female, white, stage:Stage I, alive, 615 days
17.7
TCGA-BC-A8YO-01A
0 years, female, white, stage:Stage IIIC, alive, 562 days
17.6
TCGA-DD-A4NB-01A
0 years, male, white, stage:Stage I, alive, 989 days
17.5
TCGA-DD-A4NQ-01A
0 years, male, white, stage:Stage II, dead, 373 days
17.4
TCGA-DD-A1EE-01A
0 years, male, white, stage:Stage IIIA, dead, 349 days
17.1
TCGA-DD-A73C-01A
0 years, female, white, stage:Stage IIIA, alive, 701 days
17.1
TCGA-CC-A8HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 140 days
17.0
TCGA-DD-A73B-01A
0 years, female, white, stage:Stage I, dead, 283 days
16.9
TCGA-DD-AACV-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
16.8
TCGA-DD-AADU-01A
0 years, male, asian, stage:Stage II, alive, 554 days
16.8
TCGA-DD-AACB-01A
0 years, female, asian, stage:Stage I, alive, 2324 days
16.8
TCGA-DD-AACS-01A
0 years, male, asian, stage:Stage I, alive, 1804 days
16.8
TCGA-CC-5264-01A
0 years, male, asian, stage:Stage IIIA, dead, 102 days
16.8
TCGA-DD-AAD3-01A
0 years, male, asian, stage:Stage I, alive, 1295 days
16.6
TCGA-RC-A7SB-01A
0 years, male, asian, stage:Stage II, alive, 588 days
16.5
TCGA-DD-A4NJ-01A
0 years, female, white, stage:Stage II, alive, 928 days
16.5
TCGA-DD-AADM-01A
0 years, male, asian, stage:Stage II, dead, 12 days
16.4
TCGA-CC-A7IL-01A
0 years, male, asian, stage:Stage IIIA, dead, 278 days
16.4
TCGA-DD-AACZ-01A
0 years, female, asian, stage:Stage I, dead, 171 days
16.3
TCGA-UB-A7ME-01A
0 years, male, asian, stage:Stage I, alive, 486 days
16.2
TCGA-HP-A5MZ-01A
0 years, male, stage:Stage I, dead, 91 days
16.1
TCGA-DD-AADK-01A
0 years, female, asian, stage:Stage II, alive, 1049 days
16.1
TCGA-DD-A1EA-01A
0 years, male, asian, stage:Stage II, alive, 2415 days
16.1
TCGA-DD-AAD2-01A
0 years, male, asian, stage:Stage I, alive, 658 days
16.1
TCGA-BD-A3EP-01A
0 years, female, black or african american, stage:Stage I, alive, 409 days
16.0
TCGA-DD-AAE6-01A
0 years, female, asian, stage:Stage I, alive, 141 days
16.0
TCGA-XR-A8TG-01A
0 years, male, white, stage:Stage I, alive, 898 days
15.9
TCGA-KR-A7K0-01A
0 years, male, white, stage:Stage I, dead, 65 days
15.9
TCGA-BC-A5W4-01A
0 years, male, white, stage:Stage IIIA, dead, 547 days
15.9
TCGA-G3-A7M9-01A
0 years, male, white, stage:Stage IIIB, dead, 56 days
15.8
TCGA-G3-A25S-01A
0 years, male, white, stage:Stage I, dead, 416 days
15.5
TCGA-CC-A3MA-01A
0 years, male, asian, stage:Stage IIIA, dead, 303 days
15.4
TCGA-DD-AAW0-01A
0 years, male, asian, stage:Stage I, alive, 2015 days
15.3
TCGA-2Y-A9GW-01A
0 years, male, white, stage:Stage I, dead, 1271 days
15.3
TCGA-O8-A75V-01A
0 years, male, stage:Stage I, alive, 538 days
15.2
TCGA-G3-A7M7-01A
0 years, male, white, stage:Stage I, alive, 361 days
15.2
TCGA-CC-5259-01A
0 years, female, asian, stage:Stage IIIC, alive, 250 days
15.2
TCGA-DD-AACK-01A
0 years, male, asian, stage:Stage I, alive, 9 days
15.2
TCGA-G3-A25Y-01A
0 years, female, asian, stage:Stage I, dead, 452 days
15.1
TCGA-G3-A25V-01A
0 years, male, white, stage:Stage I, alive, 860 days
15.1
TCGA-WQ-A9G7-01A
0 years, female, white, stage:'--, alive, 30 days
15.0
TCGA-GJ-A6C0-01A
0 years, female, white, stage:Stage II, dead, 31 days
14.9
TCGA-ZP-A9CV-01A
0 years, male, white, stage:'--, dead, 1088 days
14.9
TCGA-CC-5260-01A
0 years, female, asian, stage:Stage IIIC, dead, 87 days
14.8
TCGA-MI-A75G-01A
0 years, male, white, stage:Stage II, alive, 698 days
14.8
TCGA-DD-A4NV-01A
0 years, male, white, stage:Stage IIIA, alive, 2398 days
14.8
TCGA-DD-A113-01A
0 years, female, white, stage:Stage II, alive, 2425 days
14.6
TCGA-CC-A7IH-01A
0 years, male, asian, stage:Stage IIIA, alive, 365 days
14.6
TCGA-DD-A73E-01A
0 years, male, white, stage:Stage I, alive, 44 days
14.5
TCGA-ED-A97K-01A
0 years, male, asian, stage:Stage IIIA, alive, 6 days
14.4
TCGA-FV-A2QQ-01A
0 years, male, white, stage:Stage I, alive, 729 days
14.4
TCGA-DD-A1EH-01A
0 years, male, white, stage:Stage III, alive, 1495 days
14.4
TCGA-ED-A7XO-01A
0 years, male, asian, stage:Stage IIIA, alive, 427 days
14.2
TCGA-UB-A7MB-01A
0 years, male, white, stage:Stage II, alive, 601 days
14.0
TCGA-2Y-A9GV-01A
0 years, female, white, stage:Stage I, dead, 2532 days
14.0
TCGA-DD-AAEA-01A
0 years, male, asian, stage:Stage I, alive, 575 days
13.7
TCGA-DD-AACN-01A
0 years, male, asian, stage:Stage I, alive, 1302 days
13.7
TCGA-ED-A7PZ-01A
0 years, male, asian, stage:Stage II, alive, 6 days
13.7
TCGA-DD-AAVZ-01A
0 years, male, asian, stage:Stage I, alive, 1900 days
13.6
TCGA-DD-AACQ-01A
0 years, male, asian, stage:Stage II, dead, 432 days
13.5
TCGA-DD-AAE0-01A
0 years, female, asian, stage:Stage IIIA, alive, 555 days
13.4
TCGA-DD-AADW-01A
0 years, male, asian, stage:Stage I, alive, 587 days
13.3
TCGA-3K-AAZ8-01A
0 years, male, black or african american, stage:Stage IIIB, alive, 396 days
13.3
TCGA-G3-AAV4-01A
0 years, female, white, stage:Stage I, dead, 27 days
13.3
TCGA-BC-A216-01A
0 years, female, white, stage:Stage IIIA, alive, 1351 days
12.9
TCGA-K7-A5RG-01A
0 years, male, black or african american, stage:Stage I, alive, 519 days
12.9
TCGA-ZP-A9CZ-01A
0 years, male, asian, stage:'--, alive, 706 days
12.8
TCGA-CC-A8HU-01A
0 years, female, asian, stage:Stage IIIA, dead, 344 days
12.7
TCGA-FV-A495-01A
0 years, female, white, stage:Stage II, alive, 1 days
12.7
TCGA-DD-A3A9-01A
0 years, female, white, stage:Stage IVB, dead, 931 days
12.7
TCGA-UB-A7MC-01A
0 years, male, white, stage:Stage IIIA, alive, 500 days
12.7
TCGA-DD-AAEG-01A
0 years, female, asian, stage:Stage I, alive, 719 days
12.6
TCGA-BC-A10Y-01A
0 years, male, white, stage:'--, dead, 711 days
12.6
TCGA-DD-A4NR-01A
0 years, female, white, stage:Stage I, dead, 9 days
12.5
TCGA-WQ-AB4B-01A
0 years, male, white, stage:Stage II, alive, 395 days
12.5
TCGA-DD-A115-01A
0 years, male, white, stage:Stage IIIA, dead, 2542 days
12.5
TCGA-G3-AAV5-01A
0 years, male, white, stage:Stage II, alive, 354 days
12.4
TCGA-4R-AA8I-01A
0 years, male, white, stage:Stage II, dead, 262 days
12.3
TCGA-DD-AAD0-01A
0 years, female, asian, stage:Stage I, alive, 137 days
12.3
TCGA-BD-A3ER-01A
0 years, male, white, stage:Stage II, alive, 1115 days
12.2
TCGA-EP-A2KC-01A
0 years, male, black or african american, stage:Stage I, dead, 19 days
12.1
TCGA-UB-AA0U-01A
0 years, male, white, stage:Stage II, alive, 327 days
12.1
TCGA-DD-A11C-01A
0 years, male, white, stage:Stage I, alive, 662 days
12.0
TCGA-DD-AAEK-01A
0 years, male, asian, stage:Stage II, alive, 1067 days
12.0
TCGA-DD-A39X-01A
0 years, female, white, stage:Stage I, dead, 1694 days
11.9
TCGA-2Y-A9H9-01A
0 years, male, white, stage:Stage I, alive, 697 days
11.9
TCGA-K7-A6G5-01A
0 years, male, white, stage:Stage I, alive, 512 days
11.9
TCGA-DD-AADR-01A
0 years, male, asian, stage:Stage I, alive, 2028 days
11.9
TCGA-DD-A11B-01A
0 years, male, white, stage:Stage I, dead, 14 days
11.8
TCGA-ED-A459-01A
0 years, male, asian, stage:Stage II, alive, 910 days
11.8
TCGA-BC-A69H-01A
0 years, male, white, stage:Stage II, alive, 444 days
11.8
TCGA-G3-A25Z-01A
0 years, male, asian, stage:Stage I, alive, 655 days
11.7
TCGA-DD-A4NE-01A
0 years, female, white, stage:Stage IIIA, dead, 660 days
11.7
TCGA-DD-A1EC-01A
0 years, female, white, stage:Stage I, alive, 602 days
11.6
TCGA-5R-AA1D-01A
0 years, female, white, stage:Stage IIIA, alive, 449 days
11.5
TCGA-DD-AAVW-01A
0 years, male, asian, stage:Stage I, alive, 2317 days
11.5
TCGA-XR-A8TD-01A
0 years, female, white, stage:Stage IIIB, alive, 1030 days
11.4
TCGA-DD-A4NO-01A
0 years, male, white, stage:Stage I, alive, 2245 days
11.4
TCGA-DD-A3A1-01A
0 years, male, stage:Stage IIIA, dead, 233 days
11.4
TCGA-DD-AAE2-01A
0 years, male, asian, stage:Stage I, alive, 638 days
11.4
TCGA-ED-A4XI-01A
0 years, male, asian, stage:Stage II, alive, 819 days
11.4
TCGA-ED-A8O6-01A
0 years, female, asian, stage:Stage IIIA, dead, 56 days
11.3
TCGA-DD-AAVS-01A
0 years, male, asian, stage:Stage I, alive, 1823 days
11.3
TCGA-DD-AAVQ-01A
0 years, male, asian, stage:Stage I, alive, 2728 days
11.2
TCGA-G3-A7M5-01A
0 years, male, asian, stage:Stage I, alive, 447 days
11.2
TCGA-DD-AADG-01A
0 years, male, asian, stage:Stage IIIA, alive, 1145 days
11.2
TCGA-DD-A4NS-01A
0 years, female, white, stage:Stage I, dead, 2456 days
11.1
TCGA-BC-A3KF-01A
0 years, female, white, stage:Stage I, alive, 8 days
11.1
TCGA-MI-A75E-01A
0 years, male, white, stage:Stage IIIC, alive, 507 days
11.0
TCGA-RC-A6M5-01A
0 years, female, white, stage:Stage IVA, alive, 15 days
11.0
TCGA-G3-A3CK-01A
0 years, male, asian, stage:Stage I, alive, 585 days
11.0
TCGA-DD-AACX-01A
0 years, male, asian, stage:Stage II, alive, 170 days
11.0
TCGA-ES-A2HT-01A
0 years, male, black or african american, stage:Stage I, dead, 438 days
11.0
TCGA-HP-A5N0-01A
0 years, female, stage:'--, dead, 752 days
10.9
TCGA-ZP-A9CY-01A
0 years, female, white, stage:'--, alive, 782 days
10.9
TCGA-DD-A4NN-01A
0 years, female, white, stage:Stage I, dead, 899 days
10.9
TCGA-5R-AAAM-01A
0 years, female, white, stage:Stage II, dead, 46 days
10.9
TCGA-DD-A4ND-01A
0 years, female, white, stage:Stage I, alive, 2746 days
10.9
TCGA-DD-AAW1-01A
0 years, male, asian, stage:Stage IIIA, alive, 1989 days
10.8
TCGA-DD-AAVP-01A
0 years, male, asian, stage:Stage I, alive, 2752 days
10.8
TCGA-RG-A7D4-01A
0 years, male, black or african american, stage:Stage II, alive, 1098 days
10.8
TCGA-BC-A10R-01A
0 years, female, white, stage:'--, dead, 308 days
10.8
TCGA-BC-A10T-01A
0 years, male, white, stage:'--, dead, 837 days
10.8
TCGA-ED-A66Y-01A
0 years, female, asian, stage:Stage IIIA, dead, 296 days
10.7
TCGA-DD-AAEE-01A
0 years, male, asian, stage:Stage I, alive, 810 days
10.7
TCGA-DD-AACJ-01A
0 years, male, asian, stage:Stage II, alive, 2102 days
10.6
TCGA-G3-AAV3-01A
0 years, female, white, stage:Stage II, alive, 412 days
10.5
TCGA-DD-A3A5-01A
0 years, female, white, stage:Stage III, dead, 3125 days
10.5
TCGA-2Y-A9GT-01A
0 years, male, white, stage:Stage I, dead, 1624 days
10.5
TCGA-MR-A8JO-01A
0 years, male, white, stage:Stage I, alive, 330 days
10.5
TCGA-2Y-A9GZ-01A
0 years, female, white, stage:Stage II, dead, 848 days
10.5
TCGA-DD-AAD8-01A
0 years, female, asian, stage:Stage I, alive, 1219 days
10.5
TCGA-ED-A627-01A
0 years, male, white, stage:Stage I, alive, 423 days
10.4
TCGA-DD-A4NF-01A
0 years, male, white, stage:Stage I, alive, 942 days
10.4
TCGA-G3-AAV0-01A
0 years, male, asian, stage:Stage I, alive, 476 days
10.3
TCGA-G3-A5SI-01A
0 years, male, asian, stage:Stage II, dead, 768 days
10.3
TCGA-CC-A5UE-01A
0 years, male, asian, stage:Stage IIIB, dead, 272 days
10.3
TCGA-MI-A75C-01A
0 years, male, white, stage:Stage I, alive, 291 days
10.2
TCGA-DD-AACY-01A
0 years, male, asian, stage:Stage I, alive, 1450 days
10.1
TCGA-ZP-A9D1-01A
0 years, female, white, stage:'--, alive, 21 days
10.1
TCGA-FV-A496-01A
0 years, female, white, stage:Stage I, alive, 10 days
10.0
TCGA-DD-A1EB-01A
0 years, female, stage:Stage I, alive, 2017 days
10.0
TCGA-ZS-A9CF-01A
0 years, male, white, stage:Stage II, alive, 2412 days
10.0
TCGA-BC-A10S-01A
0 years, male, white, stage:'--, dead, 1423 days
9.9
TCGA-DD-A39W-01A
0 years, female, white, stage:Stage III, dead, 827 days
9.9
TCGA-DD-A73A-01A
0 years, male, white, stage:Stage I, alive, 728 days
9.8
TCGA-ED-A82E-01A
0 years, female, asian, stage:Stage IIIA, alive, 408 days
9.7
TCGA-DD-AACE-01A
0 years, male, asian, stage:Stage I, alive, 2184 days
9.7
TCGA-DD-A118-01A
0 years, female, white, stage:Stage II, alive, 3437 days
9.7
TCGA-DD-AADF-01A
0 years, female, asian, stage:Stage I, dead, 115 days
9.6
TCGA-CC-A7II-01A
0 years, male, asian, stage:Stage IIIA, alive, 399 days
9.6
TCGA-NI-A4U2-01A
0 years, male, white, stage:Stage IIIA, dead, 1791 days
9.6
TCGA-DD-A39V-01A
0 years, male, white, stage:Stage II, dead, 643 days
9.5
TCGA-DD-AADI-01A
0 years, female, asian, stage:Stage I, alive, 1085 days
9.5
TCGA-2Y-A9H2-01A
0 years, female, white, stage:Stage I, alive, 1731 days
9.5
TCGA-RC-A6M6-01A
0 years, male, white, stage:Stage II, alive, 9 days
9.5
TCGA-5C-AAPD-01A
0 years, male, asian, stage:Stage II, alive, 20 days
9.5
TCGA-CC-A5UC-01A
0 years, male, asian, stage:Stage IIIA, dead, 347 days
9.3
TCGA-DD-AAE3-01A
0 years, male, asian, stage:Stage I, alive, 566 days
9.3
TCGA-EP-A3JL-01A
0 years, male, white, stage:Stage I, alive, 303 days
9.3
TCGA-ED-A5KG-01A
0 years, female, asian, stage:Stage II, alive, 854 days
9.3
TCGA-LG-A6GG-01A
0 years, female, white, stage:Stage II, alive, 387 days
9.2
TCGA-EP-A12J-01A
0 years, male, black or african american, stage:Stage I, alive, 570 days
9.2
TCGA-2Y-A9H8-01A
0 years, female, white, stage:'--, dead, 633 days
9.2
TCGA-DD-AAC9-01A
0 years, male, asian, stage:Stage I, alive, 347 days
9.2
TCGA-G3-A25X-01A
0 years, male, asian, stage:Stage II, alive, 1779 days
9.1
TCGA-DD-AADJ-01A
0 years, female, asian, stage:Stage I, alive, 1066 days
8.9
TCGA-DD-AAE1-01A
0 years, male, asian, stage:Stage I, alive, 552 days
8.9
TCGA-XR-A8TE-01A
0 years, male, white, stage:Stage IIIA, alive, 925 days
8.8
TCGA-G3-A5SL-01A
0 years, male, white, stage:Stage II, alive, 621 days
8.8
TCGA-G3-A5SK-01A
0 years, male, white, stage:Stage I, alive, 744 days
8.8
TCGA-CC-A8HS-01A
0 years, male, asian, stage:Stage IIIC, dead, 300 days
8.7
TCGA-CC-5258-01A
0 years, male, asian, stage:Stage II, dead, 129 days
8.7
TCGA-DD-AAD6-01A
0 years, male, asian, stage:Stage IIIA, alive, 672 days
8.7
TCGA-G3-A3CG-01A
0 years, male, white, stage:Stage I, alive, 673 days
8.7
TCGA-ED-A7PY-01A
0 years, female, asian, stage:Stage II, alive, 390 days
8.7
TCGA-DD-A3A4-01A
0 years, male, white, stage:Stage IIIA, dead, 612 days
8.6
TCGA-DD-AACT-01A
0 years, female, asian, stage:Stage I, alive, 1562 days
8.6
TCGA-DD-A3A7-01A
0 years, male, stage:Stage IIIB, dead, 419 days
8.5
TCGA-G3-A25U-01A
0 years, female, asian, stage:Stage I, alive, 1636 days
8.4
TCGA-KR-A7K7-01A
0 years, female, white, stage:Stage II, alive, 951 days
8.3
TCGA-2Y-A9HB-01A
0 years, male, stage:Stage I, alive, 260 days
8.3
TCGA-DD-AAVU-01A
0 years, male, asian, stage:Stage II, alive, 2202 days
8.3
TCGA-DD-A3A2-01A
0 years, female, white, stage:Stage I, dead, 2131 days
8.2
TCGA-ZS-A9CE-01A
0 years, female, white, stage:Stage II, alive, 1241 days
8.1
TCGA-BD-A2L6-01A
0 years, male, white, stage:'--, alive, 1363 days
8.0
TCGA-ZS-A9CG-01A
0 years, male, white, stage:Stage II, alive, 341 days
7.9
TCGA-DD-AADY-01A
0 years, female, asian, stage:Stage I, alive, 555 days
7.9
TCGA-2Y-A9H6-01A
0 years, female, white, stage:Stage I, alive, 357 days
7.8
TCGA-G3-AAV6-01A
0 years, female, white, stage:Stage IIIA, dead, 65 days
7.8
TCGA-EP-A26S-01A
0 years, male, white, stage:Stage I, alive, 608 days
7.8
TCGA-CC-A9FS-01A
0 years, male, asian, stage:Stage II, alive, 211 days
7.7
TCGA-DD-AAVR-01A
0 years, male, asian, stage:Stage I, alive, 2513 days
7.6
TCGA-DD-AAED-01A
0 years, male, asian, stage:Stage I, alive, 763 days
7.6
TCGA-MI-A75H-01A
0 years, male, white, stage:'--, alive, 747 days
7.6
TCGA-EP-A2KA-01A
0 years, female, white, stage:Stage IIIA, dead, 627 days
7.6
TCGA-DD-AAEB-01A
0 years, male, asian, stage:Stage I, alive, 478 days
7.5
TCGA-DD-AADQ-01A
0 years, male, asian, stage:Stage II, alive, 436 days
7.5
TCGA-DD-AACI-01A
0 years, male, asian, stage:Stage II, alive, 1618 days
7.5
TCGA-BC-A10Q-01A
0 years, female, white, stage:'--, dead, 1135 days
7.4
TCGA-DD-AAVY-01A
0 years, male, asian, stage:Stage IIIA, alive, 1970 days
7.4
TCGA-2Y-A9H5-01A
0 years, female, white, stage:Stage I, dead, 555 days
7.4
TCGA-DD-AACF-01A
0 years, male, asian, stage:Stage I, dead, 365 days
7.3
TCGA-WX-AA47-01A
0 years, female, white, stage:Stage IIIA, dead, 556 days
7.3
TCGA-CC-A9FW-01A
0 years, male, asian, stage:Stage IIIA, alive, 248 days
7.3
TCGA-DD-A3A8-01A
0 years, male, white, stage:Stage II, dead, 11 days
7.2
TCGA-G3-A6UC-01A
0 years, male, white, stage:Stage IIIB, alive, 671 days
7.2
TCGA-DD-A4NL-01A
0 years, male, white, stage:Stage I, alive, 1711 days
7.2
TCGA-BC-A110-01A
0 years, female, black or african american, stage:'--, dead, 2116 days
7.2
TCGA-DD-A4NA-01A
0 years, female, white, stage:Stage IIIC, alive, 1008 days
7.2
TCGA-G3-A3CH-01A
0 years, male, asian, stage:Stage IIIA, alive, 780 days
7.1
TCGA-BC-A10X-01A
0 years, female, white, stage:Stage IIIA, dead, 770 days
7.1
TCGA-DD-AAE7-01A
0 years, male, asian, stage:Stage I, alive, 644 days
7.1
TCGA-DD-AAEI-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
7.0
TCGA-RC-A6M4-01A
0 years, female, white, stage:Stage IIIA, alive, 22 days
6.9
TCGA-EP-A2KB-01A
0 years, female, white, stage:Stage I, dead, 596 days
6.8
TCGA-FV-A23B-01A
0 years, female, white, stage:Stage II, dead, 1852 days
6.8
TCGA-K7-A5RF-01A
0 years, male, white, stage:Stage I, alive, 631 days
6.7
TCGA-LG-A9QC-01A
0 years, male, white, stage:Stage I, alive, 425 days
6.7
TCGA-RC-A7SF-01A
0 years, male, asian, stage:Stage I, alive, 579 days
6.7
TCGA-FV-A3R3-01A
0 years, female, white, stage:Stage I, dead, 366 days
6.7
TCGA-DD-AADP-01A
0 years, male, asian, stage:Stage I, alive, 458 days
6.6
TCGA-FV-A4ZQ-01A
0 years, male, white, stage:Stage I, alive, 12 days
6.6
TCGA-DD-A3A3-01A
0 years, male, asian, stage:Stage I, dead, 535 days
6.6
TCGA-DD-A4NG-01A
0 years, male, white, stage:Stage IIIA, dead, 802 days
6.5
TCGA-ZP-A9D0-01A
0 years, female, black or african american, stage:'--, alive, 1091 days
6.5
TCGA-DD-AA3A-01A
0 years, female, white, stage:Stage I, dead, 410 days
6.5
TCGA-G3-AAUZ-01A
0 years, male, stage:Stage I, alive, 480 days
6.4
TCGA-2Y-A9H7-01A
0 years, female, white, stage:Stage I, alive, 1168 days
6.4
TCGA-ZP-A9D4-01A
0 years, female, white, stage:'--, alive, 395 days
6.4
TCGA-DD-AACC-01A
0 years, male, asian, stage:Stage I, dead, 1685 days
6.3
TCGA-LG-A9QD-01A
0 years, male, white, stage:Stage IIIA, alive, 366 days
6.3
TCGA-DD-AADO-01A
0 years, male, asian, stage:Stage I, alive, 453 days
6.2
TCGA-DD-AACG-01A
0 years, male, asian, stage:Stage II, dead, 469 days
6.1
TCGA-G3-A25T-01A
0 years, female, white, stage:Stage IIIA, alive, 1553 days
6.0
TCGA-DD-AADN-01A
0 years, male, asian, stage:Stage I, alive, 898 days
6.0
TCGA-DD-AADC-01A
0 years, male, asian, stage:Stage I, dead, 425 days
6.0
TCGA-DD-AACP-01A
0 years, male, asian, stage:Stage I, alive, 415 days
6.0
TCGA-DD-A73D-01A
0 years, female, white, stage:Stage II, alive, 693 days
5.9
TCGA-UB-A7MF-01A
0 years, male, white, stage:Stage IIIA, dead, 214 days
5.8
TCGA-KR-A7K2-01A
0 years, male, white, stage:Stage I, alive, 829 days
5.7
TCGA-CC-A7IF-01A
0 years, male, asian, stage:Stage IIIA, dead, 649 days
5.7
TCGA-RC-A7S9-01A
0 years, female, asian, stage:Stage I, alive, 640 days
5.7
TCGA-DD-AAEH-01A
0 years, male, asian, stage:Stage I, alive, 784 days
5.5
TCGA-ES-A2HS-01A
0 years, male, white, stage:Stage I, dead, 688 days
5.5
TCGA-DD-A4NI-01A
0 years, male, white, stage:Stage II, alive, 816 days
5.5
TCGA-NI-A8LF-01A
0 years, male, white, stage:Stage I, alive, 799 days
5.4
TCGA-2Y-A9GU-01A
0 years, female, white, stage:Stage I, alive, 1939 days
5.4
TCGA-DD-A4NP-01A
0 years, male, white, stage:Stage I, alive, 3308 days
5.4
TCGA-DD-AAE4-01A
0 years, female, asian, stage:Stage I, alive, 608 days
5.3
TCGA-ED-A8O5-01A
0 years, female, asian, stage:Stage IIIA, alive, 406 days
5.3
TCGA-BC-A69I-01A
0 years, male, white, stage:Stage I, alive, 387 days
5.3
TCGA-DD-AADA-01A
0 years, female, asian, stage:Stage I, alive, 1233 days
5.2
TCGA-XR-A8TF-01A
0 years, male, white, stage:Stage I, dead, 693 days
5.2
TCGA-DD-AACA-01A
0 years, male, asian, stage:Stage I, alive, 2301 days
5.2
TCGA-DD-A39Z-01A
0 years, female, stage:Stage II, dead, 601 days
5.2
TCGA-DD-A1ED-01A
0 years, male, white, stage:Stage I, alive, 2301 days
5.1
TCGA-UB-AA0V-01A
0 years, female, white, stage:Stage I, alive, 314 days
5.1
TCGA-DD-A116-01A
0 years, male, asian, stage:Stage IIIA, dead, 1622 days
5.1
TCGA-FV-A4ZP-01A
0 years, male, white, stage:Stage IIIA, dead, 2486 days
5.0
TCGA-5C-A9VG-01A
0 years, male, white, stage:Stage II, alive, 328 days
4.9
TCGA-DD-A4NK-01A
0 years, female, white, stage:Stage IIIA, dead, 1210 days
4.9
TCGA-DD-A119-01A
0 years, male, asian, stage:Stage IV, dead, 223 days
4.8
TCGA-CC-A123-01A
0 years, female, asian, stage:Stage IIIA, alive, 219 days
4.7
TCGA-DD-A1EF-01A
0 years, female, white, stage:Stage I, dead, 394 days
4.6
TCGA-DD-A73G-01A
0 years, female, white, stage:Stage I, alive, 3478 days
4.6
TCGA-DD-AADS-01A
0 years, male, asian, stage:Stage I, alive, 474 days
4.5
TCGA-DD-AAVX-01A
0 years, male, asian, stage:Stage II, alive, 1718 days
4.5
TCGA-DD-AAW3-01A
0 years, male, asian, stage:Stage I, alive, 1633 days
4.4
TCGA-CC-A7IE-01A
0 years, male, asian, stage:Stage IIIA, dead, 217 days
4.4
TCGA-2Y-A9H3-01A
0 years, male, white, stage:Stage II, alive, 1516 days
4.0
TCGA-WX-AA46-01A
0 years, male, white, stage:Stage II, alive, 756 days
3.9
TCGA-DD-AAW2-01A
0 years, male, asian, stage:Stage I, alive, 1855 days
3.9
TCGA-2Y-A9H1-01A
0 years, male, white, stage:Stage I, dead, 1229 days
3.8
TCGA-G3-A3CJ-01A
0 years, male, american indian or alaska native, stage:Stage II, alive, 594 days
3.8
TCGA-DD-AACO-01A
0 years, male, asian, stage:Stage I, alive, 1876 days
3.0
TCGA-DD-AACW-01A
0 years, male, asian, stage:Stage I, alive, 1424 days
3.0
TCGA-DD-AACD-01A
0 years, male, asian, stage:Stage I, dead, 381 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
ANO10 is not prognostic in Liver Hepatocellular Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
8.0
Number of samples
231
Samples
Sample
Description
TPM
DO50829
0 years, male, NA, stage:3, alive, 570 days
48.1
DO23511
0 years, female, NA, stage:3, dead, 180 days
44.9
DO45275
0 years, male, NA, stage:3, dead, 10 days
32.4
DO23524
0 years, female, NA, stage:2, alive, 1050 days
28.6
DO45092
0 years, male, NA, stage:4, dead, 1200 days
25.9
DO45307
0 years, female, NA, stage:4, dead, 240 days
23.2
DO48701
0 years, male, NA, stage:2, alive, 780 days
22.9
DO23513
0 years, male, NA, stage:3, alive, 1200 days
22.0
DO45209
0 years, male, NA, stage:4, alive, 1350 days
21.4
DO45131
0 years, male, NA, stage:4, dead, 360 days
20.8
DO45119
0 years, male, NA, stage:3, dead, 510 days
20.2
DO45185
0 years, male, NA, stage:2, alive, 600 days
19.1
DO45205
0 years, female, NA, stage:2, dead, 90 days
18.7
DO45153
0 years, female, NA, stage:2, alive, 1380 days
17.5
DO48732
0 years, male, NA, stage:3, alive, 630 days
17.4
DO45155
0 years, male, NA, stage:2, alive, 2160 days
16.3
DO45157
0 years, male, NA, stage:2, alive, 1980 days
14.0
DO50791
0 years, female, NA, stage:1, dead, 480 days
13.9
DO45139
0 years, male, NA, stage:3, alive, 1320 days
13.7
DO48747
0 years, male, NA, stage:3, alive, 540 days
13.4
DO23510
0 years, female, NA, stage:2, alive, 870 days
13.2
DO23540
0 years, male, NA, stage:1, alive, 750 days
13.1
DO45277
0 years, male, NA, stage:3, alive, 600 days
13.0
DO45149
0 years, female, NA, stage:2, alive, 1260 days
12.9
DO23547
0 years, male, NA, stage:1, alive, 1020 days
12.8
DO50813
0 years, male, NA, stage:2, alive, 420 days
12.5
DO50840
0 years, male, NA, stage:2, alive, 330 days
12.4
DO48700
0 years, female, NA, stage:2, alive, 810 days
12.4
DO50799
0 years, female, NA, stage:2, alive, 540 days
12.3
DO23542
0 years, male, NA, stage:3, alive, 960 days
12.2
DO45267
0 years, male, NA, stage:3, dead, 570 days
11.9
DO227801
0 years, female, NA, stage:1, alive, 660 days
11.9
DO45259
0 years, male, NA, stage:3, alive, 330 days
11.7
DO48679
0 years, male, NA, stage:2, alive, 1200 days
11.6
DO23535
0 years, male, NA, stage:1, alive, 960 days
11.5
DO48741
0 years, male, NA, stage:3, alive, 240 days
11.5
DO23539
0 years, male, NA, stage:1, alive, 1110 days
11.1
DO50805
0 years, male, NA, stage:2, alive, 690 days
11.1
DO45171
0 years, male, NA, stage:3, alive, 600 days
11.0
DO23508
0 years, female, NA, stage:2, alive, 390 days
10.9
DO45219
0 years, male, NA, stage:2, alive, 1080 days
10.7
DO23532
0 years, female, NA, stage:1, alive, 960 days
10.7
DO50808
0 years, male, NA, stage:2, alive, 570 days
10.6
DO50832
0 years, male, NA, stage:3, alive, 90 days
10.5
DO48704
0 years, female, NA, stage:3, alive, 750 days
10.4
DO45223
0 years, male, NA, stage:4, alive, 1020 days
10.4
DO45255
0 years, male, NA, stage:3, alive, 720 days
10.3
DO23519
0 years, male, NA, stage:3, alive, 630 days
10.3
DO23552
0 years, female, NA, stage:1, alive, 810 days
10.2
DO45217
0 years, female, NA, stage:3, dead, 270 days
10.0
DO45111
0 years, male, NA, stage:2, alive, 1590 days
9.8
DO50776
0 years, male, NA, stage:1, alive, 690 days
9.7
DO45093
0 years, male, NA, stage:2, dead, 720 days
9.7
DO48721
0 years, female, NA, stage:1, alive, 900 days
9.5
DO45165
0 years, male, NA, stage:2, alive, 690 days
9.5
DO45211
0 years, male, NA, stage:3, alive, 240 days
9.4
DO45245
0 years, female, NA, stage:2, dead, 240 days
9.3
DO48697
0 years, female, NA, stage:2, dead, 810 days
9.2
DO50774
0 years, female, NA, stage:2, alive, 720 days
9.2
DO45169
0 years, male, NA, stage:3, alive, 1350 days
9.1
DO23534
0 years, male, NA, stage:2, alive, 840 days
9.1
DO45191
0 years, female, NA, stage:2, alive, 1200 days
9.0
DO50859
0 years, male, NA, stage:2, alive, 180 days
9.0
DO23526
0 years, male, NA, stage:3, alive, 1050 days
9.0
DO50814
0 years, male, NA, stage:3, alive, 420 days
8.8
DO50825
0 years, male, NA, stage:2, alive, 390 days
8.8
DO45193
0 years, female, NA, stage:4, dead, 120 days
8.7
DO45143
0 years, male, NA, stage:3, alive, 1290 days
8.7
DO50800
0 years, male, NA, stage:2, alive, 510 days
8.7
DO45145
0 years, male, NA, stage:3, dead, 60 days
8.6
DO23521
0 years, male, NA, stage:3, alive, 1110 days
8.6
DO45285
0 years, male, NA, stage:3, alive, 480 days
8.6
DO23523
0 years, male, NA, stage:3, alive, 1080 days
8.5
DO45177
0 years, female, NA, stage:3, alive, 1260 days
8.4
DO45225
0 years, male, NA, stage:1, alive, 1050 days
8.4
DO45273
0 years, male, NA, stage:2, alive, 480 days
8.4
DO48736
0 years, female, NA, stage:1, alive, 600 days
8.4
DO50822
0 years, male, NA, stage:2, alive, 510 days
8.4
DO45121
0 years, male, NA, stage:3, alive, 1530 days
8.1
DO48717
0 years, male, NA, stage:4, dead, 180 days
8.0
DO45113
0 years, male, NA, stage:3, alive, 1560 days
7.9
DO45137
0 years, male, NA, stage:1, alive, 1320 days
7.9
DO45281
0 years, male, NA, stage:4, alive, 750 days
7.8
DO23536
0 years, male, NA, stage:2, alive, 930 days
7.8
DO45135
0 years, male, NA, stage:1, alive, 1410 days
7.8
DO48733
0 years, male, NA, stage:2, alive, 600 days
7.8
DO45237
0 years, male, NA, stage:2, alive, 900 days
7.8
DO45213
0 years, male, NA, stage:1, alive, 1200 days
7.8
DO45163
0 years, male, NA, stage:2, alive, 960 days
7.7
DO48716
0 years, male, NA, stage:2, alive, 720 days
7.7
DO45289
0 years, female, NA, stage:3, alive, 360 days
7.6
DO45173
0 years, male, NA, stage:3, alive, 1170 days
7.6
DO45299
0 years, female, NA, stage:1, alive, 1440 days
7.6
DO45279
0 years, male, NA, stage:3, alive, 1290 days
7.6
DO23530
0 years, male, NA, stage:4, dead, 180 days
7.6
DO48759
0 years, male, NA, stage:3, alive, 720 days
7.6
DO23525
0 years, male, NA, stage:4, alive, 1050 days
7.5
DO45189
0 years, female, NA, stage:2, alive, 1200 days
7.5
DO48761
0 years, male, NA, stage:2, alive, 870 days
7.5
DO45161
0 years, male, NA, stage:2, dead, 540 days
7.5
DO45231
0 years, male, NA, stage:2, alive, 930 days
7.4
DO45229
0 years, male, NA, stage:1, alive, 990 days
7.4
DO48682
0 years, female, NA, stage:3, dead, 120 days
7.4
DO45235
0 years, female, NA, stage:1, alive, 900 days
7.3
DO45197
0 years, male, NA, stage:2, alive, 1170 days
7.2
DO50819
0 years, female, NA, stage:2, alive, 510 days
7.1
DO45249
0 years, male, NA, stage:1, alive, 630 days
7.1
DO45179
0 years, female, NA, stage:2, alive, 600 days
7.1
DO45263
0 years, male, NA, stage:3, dead, 270 days
7.0
DO23509
0 years, male, NA, stage:3, dead, 780 days
7.0
DO50855
0 years, male, NA, stage:2, alive, 570 days
7.0
DO45187
0 years, female, NA, stage:1, alive, 1260 days
6.9
DO23529
0 years, male, NA, stage:4, alive, 930 days
6.9
DO23541
0 years, male, NA, stage:2, alive, 930 days
6.8
DO45105
0 years, male, NA, stage:1, alive, 1680 days
6.8
DO50809
0 years, male, NA, stage:3, dead, 720 days
6.7
DO23518
0 years, male, NA, stage:2, alive, 1320 days
6.7
DO50787
0 years, male, NA, stage:3, alive, 480 days
6.7
DO48730
0 years, female, NA, stage:2, alive, 630 days
6.6
DO45251
0 years, female, NA, stage:2, alive, 900 days
6.6
DO45283
0 years, male, NA, stage:3, alive, 510 days
6.6
DO50850
0 years, male, NA, stage:3, alive, 720 days
6.5
DO50816
0 years, male, NA, stage:2, alive, 390 days
6.5
DO50844
0 years, male, NA, stage:4, alive, 300 days
6.5
DO23512
0 years, male, NA, stage:1, alive, 1260 days
6.5
DO23528
0 years, female, NA, stage:2, alive, 1020 days
6.5
DO48727
0 years, female, NA, stage:2, dead, 390 days
6.4
DO48720
0 years, female, NA, stage:2, alive, 570 days
6.4
DO45109
0 years, male, NA, stage:2, alive, 1590 days
6.4
DO45127
0 years, male, NA, stage:3, dead, 420 days
6.4
DO45099
0 years, male, NA, stage:3, alive, 1590 days
6.3
DO45103
0 years, male, NA, stage:3, alive, 450 days
6.3
DO48751
0 years, male, NA, stage:2, dead, 480 days
6.3
DO50806
0 years, male, NA, stage:4, alive, 540 days
6.3
DO23533
0 years, male, NA, stage:2, alive, 900 days
6.2
DO48725
0 years, male, NA, stage:1, alive, 780 days
6.2
DO45141
0 years, male, NA, stage:2, alive, 1320 days
6.2
DO45303
0 years, female, NA, stage:3, alive, 990 days
6.2
DO45095
0 years, male, NA, stage:2, alive, 1620 days
6.0
DO48737
0 years, male, NA, stage:1, alive, 720 days
5.9
DO45241
0 years, male, NA, stage:1, alive, 1080 days
5.9
DO48743
0 years, female, NA, stage:2, alive, 570 days
5.9
DO45221
0 years, female, NA, stage:4, dead, 390 days
5.8
DO45129
0 years, male, NA, stage:3, alive, 1470 days
5.8
DO23545
0 years, male, NA, stage:2, dead, 570 days
5.7
DO45269
0 years, male, NA, stage:3, alive, 750 days
5.7
DO48695
0 years, male, NA, stage:2, alive, 720 days
5.7
DO50778
0 years, male, NA, stage:4, alive, 630 days
5.7
DO45094
0 years, male, NA, stage:3, alive, 1650 days
5.7
DO23537
0 years, male, NA, stage:2, dead, 900 days
5.6
DO45261
0 years, male, NA, stage:3, alive, 990 days
5.6
DO45305
0 years, male, NA, stage:4, alive, 300 days
5.6
DO45101
0 years, male, NA, stage:2, alive, 1680 days
5.4
DO45201
0 years, male, NA, stage:1, alive, 900 days
5.4
DO45125
0 years, male, NA, stage:3, alive, 1680 days
5.4
DO23515
0 years, male, NA, stage:2, alive, 1230 days
5.3
DO45207
0 years, male, NA, stage:1, alive, 1050 days
5.2
DO45183
0 years, female, NA, stage:2, dead, 570 days
5.1
DO45199
0 years, female, NA, stage:2, alive, 1350 days
5.1
DO45159
0 years, male, NA, stage:3, alive, 1470 days
5.1
DO45117
0 years, female, NA, stage:2, dead, 1110 days
5.0
DO45091
0 years, male, NA, stage:2, dead, 1320 days
5.0
DO23514
0 years, male, NA, stage:2, alive, 1290 days
5.0
DO48760
0 years, female, NA, stage:2, alive, 690 days
5.0
DO45115
0 years, male, NA, stage:2, alive, 840 days
4.9
DO48681
0 years, male, NA, stage:2, alive, 900 days
4.9
DO45301
0 years, male, NA, stage:2, dead, 1440 days
4.9
DO50845
0 years, male, NA, stage:3, alive, 210 days
4.9
DO23527
0 years, male, NA, stage:1, alive, 1050 days
4.9
DO45227
0 years, female, NA, stage:2, alive, 1020 days
4.9
DO45287
0 years, male, NA, stage:1, alive, 390 days
4.8
DO45096
0 years, male, NA, stage:2, dead, 1290 days
4.8
DO45297
0 years, female, NA, stage:4, dead, 1260 days
4.8
DO50802
0 years, male, NA, stage:2, alive, 930 days
4.7
DO48757
0 years, female, NA, stage:3, alive, 480 days
4.7
DO45133
0 years, male, NA, stage:3, dead, 660 days
4.7
DO48712
0 years, male, NA, stage:2, alive, 810 days
4.7
DO48728
0 years, female, NA, stage:2, alive, 150 days
4.7
DO50857
0 years, male, NA, stage:2, alive, 210 days
4.6
DO50798
0 years, male, NA, stage:3, dead, 30 days
4.6
DO48723
0 years, male, NA, stage:1, alive, 600 days
4.6
DO48742
0 years, male, NA, stage:2, alive, 600 days
4.6
DO45265
0 years, male, NA, stage:3, alive, 1020 days
4.6
DO50811
0 years, male, NA, stage:1, alive, 450 days
4.6
DO50839
0 years, female, NA, stage:3, alive, 330 days
4.5
DO45123
0 years, female, NA, stage:2, dead, 570 days
4.5
DO50815
0 years, male, NA, stage:3, alive, 150 days
4.4
DO45233
0 years, male, NA, stage:3, alive, 900 days
4.4
DO23549
0 years, male, NA, stage:3, alive, 990 days
4.4
DO45257
0 years, male, NA, stage:3, alive, 810 days
4.4
DO45107
0 years, female, NA, stage:2, alive, 1710 days
4.3
DO45253
0 years, male, NA, stage:2, alive, 870 days
4.3
DO48672
0 years, male, NA, stage:2, alive, 450 days
4.2
DO50803
0 years, female, NA, stage:1, alive, 540 days
4.2
DO50793
0 years, male, NA, stage:4, alive, 540 days
3.9
DO45243
0 years, female, NA, stage:3, alive, 930 days
3.8
DO23538
0 years, male, NA, stage:2, alive, 450 days
3.7
DO48693
0 years, male, NA, stage:2, alive, 900 days
3.7
DO23546
0 years, male, NA, stage:2, alive, 1050 days
3.7
DO50785
0 years, male, NA, stage:4, dead, 90 days
3.6
DO23550
0 years, male, NA, stage:1, alive, 990 days
3.6
DO45239
0 years, male, NA, stage:2, alive, 870 days
3.6
DO50820
0 years, female, NA, stage:3, alive, 510 days
3.6
DO50818
0 years, male, NA, stage:2, alive, 510 days
3.5
DO50804
0 years, male, NA, stage:2, alive, 720 days
3.5
DO45175
0 years, male, NA, stage:2, alive, 1140 days
3.4
DO48746
0 years, male, NA, stage:3, alive, 570 days
3.3
DO45215
0 years, male, NA, stage:2, alive, 1170 days
3.1
DO23516
0 years, male, NA, stage:3, dead, 20 days
3.0
DO45167
0 years, male, NA, stage:2, dead, 1440 days
2.9
DO227643
0 years, male, NA, stage:2, alive, 1260 days
2.9
DO50807
0 years, male, NA, stage:1, alive, 540 days
2.8
DO48706
0 years, male, NA, stage:2, alive, 870 days
2.7
DO50789
0 years, female, NA, stage:2, alive, 570 days
2.7
DO23543
0 years, male, NA, stage:2, alive, 1020 days
2.6
DO45203
0 years, female, NA, stage:2, alive, 1170 days
2.5
DO48719
0 years, male, NA, stage:2, alive, 690 days
2.4
DO23551
0 years, male, NA, stage:3, dead, 150 days
2.3
DO23531
0 years, female, NA, stage:3, alive, 900 days
2.3
DO45181
0 years, female, NA, stage:2, alive, 1200 days
2.2
DO45247
0 years, female, NA, stage:2, alive, 210 days
2.1
DO48715
0 years, female, NA, stage:2, dead, 690 days
2.1
DO50783
0 years, male, NA, stage:3, alive, 480 days
1.9
DO23544
0 years, male, NA, stage:2, alive, 960 days
1.9
DO23548
0 years, female, NA, stage:1, alive, 840 days
1.9
DO50817
0 years, male, NA, stage:2, alive, 390 days
1.9
DO45097
0 years, male, NA, stage:3, alive, 1620 days
1.8
DO45195
0 years, male, NA, stage:1, alive, 390 days
1.7
DO48674
0 years, male, NA, stage:2, alive, 1260 days
1.7
DO23517
0 years, male, NA, stage:2, alive, 1200 days
1.5
DO48677
0 years, male, NA, stage:3, alive, 1140 days
1.3
Show allShow less
LIVER HEPATOCELLULAR CARCINOMA - Protein relative expression (CPTAC)
Number of samples
330
Samples
Sample ID
Sample type
nRPX
125
Tumor
1.2
745
Tumor
1.1
857
Tumor
1.0
395
Tumor
1.0
741
Tumor
0.9
487
Tumor
0.9
525
Tumor
0.8
257
Tumor
0.8
1013
Tumor
0.8
913
Tumor
0.7
863
Tumor
0.7
421
Tumor
0.7
435
Tumor
0.7
953
Tumor
0.7
375
Tumor
0.7
537
Tumor
0.7
861
Tumor
0.6
627
Tumor
0.6
647
Tumor
0.6
911
Tumor
0.6
755
Tumor
0.6
311
Tumor
0.6
533
Tumor
0.6
427
Tumor
0.6
221
Tumor
0.5
491
Tumor
0.5
261
Tumor
0.5
267
Tumor
0.5
137
Tumor
0.5
145
Tumor
0.5
415
Tumor
0.4
473
Tumor
0.4
724
Normal
0.4
231
Tumor
0.4
1041
Tumor
0.4
553
Tumor
0.4
963
Tumor
0.4
147
Tumor
0.4
868
Normal
0.4
663
Tumor
0.3
917
Tumor
0.3
978
Normal
0.3
1014
Normal
0.3
563
Tumor
0.3
567
Tumor
0.3
327
Tumor
0.3
481
Tumor
0.2
518
Normal
0.2
361
Tumor
0.2
697
Tumor
0.2
455
Tumor
0.2
171
Tumor
0.2
526
Normal
0.2
477
Tumor
0.2
981
Tumor
0.2
1027
Tumor
0.2
478
Normal
0.2
785
Tumor
0.2
817
Tumor
0.2
223
Tumor
0.2
212
Normal
0.2
513
Tumor
0.2
492
Normal
0.2
451
Tumor
0.2
1016
Normal
0.2
984
Normal
0.2
471
Tumor
0.2
363
Tumor
0.2
523
Tumor
0.2
172
Normal
0.2
881
Tumor
0.2
943
Tumor
0.1
283
Tumor
0.1
641
Tumor
0.1
472
Normal
0.1
925
Tumor
0.1
977
Tumor
0.1
874
Normal
0.1
474
Normal
0.1
515
Tumor
0.1
685
Tumor
0.1
937
Tumor
0.1
494
Normal
0.1
728
Normal
0.1
462
Normal
0.1
365
Tumor
0.1
355
Tumor
0.1
328
Normal
0.1
297
Tumor
0.1
482
Normal
0.1
187
Tumor
0.1
922
Normal
0.1
534
Normal
0.1
648
Normal
0.1
777
Tumor
0.1
536
Normal
0.1
416
Normal
0.1
982
Normal
0.1
528
Normal
0.1
968
Normal
0.1
483
Tumor
0.1
727
Tumor
0.1
514
Normal
0.1
484
Normal
0.1
271
Tumor
0.0
952
Normal
0.0
558
Normal
0.0
918
Normal
0.0
983
Tumor
0.0
884
Normal
0.0
954
Normal
0.0
1015
Tumor
0.0
312
Normal
0.0
955
Tumor
0.0
944
Normal
0.0
976
Normal
0.0
1042
Normal
0.0
564
Normal
0.0
387
Tumor
0.0
343
Tumor
0.0
466
Normal
0.0
786
Normal
0.0
851
Tumor
0.0
956
Normal
0.0
722
Normal
0.0
424
Normal
0.0
617
Tumor
0.0
188
Normal
0.0
866
Normal
0.0
136
Normal
0.0
498
Normal
0.0
1028
Normal
0.0
262
Normal
0.0
714
Normal
0.0
436
Normal
0.0
313
Tumor
0.0
926
Normal
0.0
191
Tumor
0.0
738
Normal
0.0
873
Tumor
0.0
1022
Normal
0.0
958
Normal
0.0
444
Normal
-0.1
538
Normal
-0.1
527
Tumor
-0.1
362
Normal
-0.1
148
Normal
-0.1
742
Normal
-0.1
268
Normal
-0.1
823
Tumor
-0.1
412
Normal
-0.1
721
Tumor
-0.1
353
Tumor
-0.1
852
Normal
-0.1
364
Normal
-0.1
1032
Normal
-0.1
723
Tumor
-0.1
341
Tumor
-0.1
224
Normal
-0.1
127
Tumor
-0.1
516
Normal
-0.1
132
Normal
-0.1
573
Tumor
-0.1
356
Normal
-0.1
195
Tumor
-0.1
756
Normal
-0.1
185
Tumor
-0.1
488
Normal
-0.1
161
Tumor
-0.1
394
Normal
-0.1
535
Tumor
-0.1
217
Tumor
-0.1
915
Tumor
-0.1
192
Normal
-0.1
557
Tumor
-0.1
126
Normal
-0.1
912
Normal
-0.1
864
Normal
-0.1
138
Normal
-0.1
816
Normal
-0.1
883
Tumor
-0.1
272
Normal
-0.1
414
Normal
-0.1
642
Normal
-0.1
924
Normal
-0.1
277
Tumor
-0.1
284
Normal
-0.1
554
Normal
-0.1
392
Normal
-0.1
396
Normal
-0.1
386
Normal
-0.1
815
Tumor
-0.1
433
Tumor
-0.1
428
Normal
-0.1
232
Normal
-0.1
572
Normal
-0.1
923
Tumor
-0.1
951
Tumor
-0.1
914
Normal
-0.1
862
Normal
-0.2
357
Tumor
-0.2
571
Tumor
-0.2
524
Normal
-0.2
258
Normal
-0.2
445
Tumor
-0.2
1046
Normal
-0.2
331
Tumor
-0.2
686
Normal
-0.2
1026
Normal
-0.2
162
Normal
-0.2
1045
Tumor
-0.2
218
Normal
-0.2
351
Tumor
-0.2
662
Normal
-0.2
921
Tumor
-0.2
391
Tumor
-0.2
383
Tumor
-0.2
465
Tumor
-0.2
222
Normal
-0.2
463
Tumor
-0.2
744
Normal
-0.2
628
Normal
-0.2
664
Normal
-0.2
211
Tumor
-0.2
432
Normal
-0.2
737
Tumor
-0.2
882
Normal
-0.2
278
Normal
-0.2
574
Normal
-0.2
938
Normal
-0.2
568
Normal
-0.2
975
Tumor
-0.2
698
Normal
-0.2
111
Normal
-0.2
814
Normal
-0.2
286
Normal
-0.2
546
Normal
-0.2
618
Normal
-0.2
196
Normal
-0.2
464
Normal
-0.2
434
Normal
-0.2
545
Tumor
-0.2
746
Normal
-0.2
422
Normal
-0.2
368
Normal
-0.2
966
Normal
-0.2
1031
Tumor
-0.2
228
Normal
-0.2
135
Tumor
-0.2
214
Normal
-0.2
384
Normal
-0.2
227
Tumor
-0.2
696
Normal
-0.2
813
Tumor
-0.2
778
Normal
-0.2
128
Normal
-0.2
366
Normal
-0.2
124
Normal
-0.2
636
Normal
-0.2
666
Normal
-0.3
1021
Tumor
-0.3
1044
Normal
-0.3
824
Normal
-0.3
352
Normal
-0.3
446
Normal
-0.3
448
Normal
-0.3
314
Normal
-0.3
467
Tumor
-0.3
964
Normal
-0.3
878
Normal
-0.3
461
Tumor
-0.3
426
Normal
-0.3
388
Normal
-0.3
468
Normal
-0.3
354
Normal
-0.3
344
Normal
-0.3
141
Tumor
-0.3
716
Normal
-0.3
1043
Tumor
-0.3
715
Tumor
-0.3
865
Tumor
-0.3
376
Normal
-0.3
858
Normal
-0.4
114
Normal
-0.4
186
Normal
-0.4
142
Normal
-0.4
146
Normal
-0.4
447
Tumor
-0.4
213
Tumor
-0.4
112
Tumor
-0.4
867
Tumor
-0.4
423
Tumor
-0.4
393
Tumor
-0.4
665
Tumor
-0.4
113
Tumor
-0.4
298
Normal
-0.4
672
Normal
-0.4
342
Normal
-0.4
456
Normal
-0.4
965
Tumor
-0.5
818
Normal
-0.5
385
Tumor
-0.5
695
Tumor
-0.5
367
Tumor
-0.5
615
Tumor
-0.5
957
Tumor
-0.5
443
Tumor
-0.5
671
Tumor
-0.5
635
Tumor
-0.5
916
Normal
-0.5
713
Tumor
-0.5
411
Tumor
-0.5
877
Tumor
-0.5
332
Normal
-0.5
358
Normal
-0.5
285
Tumor
-0.6
616
Normal
-0.6
431
Tumor
-0.6
493
Tumor
-0.6
452
Normal
-0.6
661
Tumor
-0.6
1025
Tumor
-0.6
497
Tumor
-0.7
967
Tumor
-0.7
131
Tumor
-0.7
517
Tumor
-0.8
123
Tumor
-1.0
413
Tumor
-1.2
425
Tumor
-1.2
743
Tumor
-1.8
Show allShow less
LIVER CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
