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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
IL6R is not prognostic in Liver Hepatocellular Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
22.9
Number of samples
362
Samples
Sample
Description
TPM
TCGA-UB-A7MB-01A
0 years, male, white, stage:Stage II, alive, 601 days
195.9
TCGA-XR-A8TC-01A
0 years, female, white, stage:Stage I, alive, 1339 days
111.3
TCGA-BC-A10W-01A
0 years, male, asian, stage:'--, dead, 91 days
106.2
TCGA-UB-A7MC-01A
0 years, male, white, stage:Stage IIIA, alive, 500 days
95.8
TCGA-DD-A1EB-01A
0 years, female, stage:Stage I, alive, 2017 days
82.6
TCGA-DD-A11C-01A
0 years, male, white, stage:Stage I, alive, 662 days
79.2
TCGA-XR-A8TF-01A
0 years, male, white, stage:Stage I, dead, 693 days
75.9
TCGA-DD-AAVS-01A
0 years, male, asian, stage:Stage I, alive, 1823 days
75.4
TCGA-G3-A25U-01A
0 years, female, asian, stage:Stage I, alive, 1636 days
74.7
TCGA-DD-A1EE-01A
0 years, male, white, stage:Stage IIIA, dead, 349 days
70.3
TCGA-BC-A8YO-01A
0 years, female, white, stage:Stage IIIC, alive, 562 days
69.2
TCGA-ZP-A9CZ-01A
0 years, male, asian, stage:'--, alive, 706 days
68.2
TCGA-DD-A1EA-01A
0 years, male, asian, stage:Stage II, alive, 2415 days
67.8
TCGA-2Y-A9H9-01A
0 years, male, white, stage:Stage I, alive, 697 days
67.8
TCGA-DD-AADP-01A
0 years, male, asian, stage:Stage I, alive, 458 days
66.4
TCGA-2Y-A9GZ-01A
0 years, female, white, stage:Stage II, dead, 848 days
66.2
TCGA-DD-AAVZ-01A
0 years, male, asian, stage:Stage I, alive, 1900 days
65.4
TCGA-DD-AACH-01A
0 years, male, asian, stage:Stage II, dead, 195 days
63.5
TCGA-XR-A8TE-01A
0 years, male, white, stage:Stage IIIA, alive, 925 days
63.3
TCGA-DD-AACW-01A
0 years, male, asian, stage:Stage I, alive, 1424 days
62.6
TCGA-DD-A11B-01A
0 years, male, white, stage:Stage I, dead, 14 days
59.6
TCGA-DD-A4NF-01A
0 years, male, white, stage:Stage I, alive, 942 days
59.4
TCGA-DD-AADD-01A
0 years, male, asian, stage:Stage I, alive, 1231 days
59.1
TCGA-DD-A4NK-01A
0 years, female, white, stage:Stage IIIA, dead, 1210 days
58.1
TCGA-G3-A6UC-01A
0 years, male, white, stage:Stage IIIB, alive, 671 days
55.6
TCGA-CC-A7IH-01A
0 years, male, asian, stage:Stage IIIA, alive, 365 days
55.5
TCGA-XR-A8TG-01A
0 years, male, white, stage:Stage I, alive, 898 days
55.2
TCGA-DD-A39W-01A
0 years, female, white, stage:Stage III, dead, 827 days
55.0
TCGA-DD-AAE6-01A
0 years, female, asian, stage:Stage I, alive, 141 days
54.8
TCGA-BC-A3KG-01A
0 years, female, white, stage:Stage II, alive, 680 days
53.2
TCGA-LG-A9QC-01A
0 years, male, white, stage:Stage I, alive, 425 days
53.2
TCGA-EP-A26S-01A
0 years, male, white, stage:Stage I, alive, 608 days
52.5
TCGA-KR-A7K8-01A
0 years, male, stage:Stage I, alive, 906 days
51.0
TCGA-DD-AACA-01A
0 years, male, asian, stage:Stage I, alive, 2301 days
50.9
TCGA-5R-AA1C-01A
0 years, male, white, stage:Stage II, alive, 520 days
50.8
TCGA-DD-AACE-01A
0 years, male, asian, stage:Stage I, alive, 2184 days
47.9
TCGA-FV-A3R3-01A
0 years, female, white, stage:Stage I, dead, 366 days
47.2
TCGA-DD-AAVW-01A
0 years, male, asian, stage:Stage I, alive, 2317 days
46.9
TCGA-DD-AADV-01A
0 years, male, asian, stage:Stage I, alive, 574 days
45.3
TCGA-DD-A1EF-01A
0 years, female, white, stage:Stage I, dead, 394 days
44.6
TCGA-2Y-A9HA-01A
0 years, male, white, stage:Stage II, dead, 36 days
44.6
TCGA-CC-A7IK-01A
0 years, male, asian, stage:Stage IIIA, dead, 262 days
44.1
TCGA-DD-AAC8-01A
0 years, male, asian, stage:Stage I, dead, 16 days
43.8
TCGA-2Y-A9H7-01A
0 years, female, white, stage:Stage I, alive, 1168 days
43.6
TCGA-CC-A3MC-01A
0 years, male, asian, stage:Stage IIIA, alive, 363 days
43.3
TCGA-G3-AAV2-01A
0 years, male, white, stage:Stage I, alive, 372 days
43.1
TCGA-G3-A5SI-01A
0 years, male, asian, stage:Stage II, dead, 768 days
43.0
TCGA-G3-A3CH-01A
0 years, male, asian, stage:Stage IIIA, alive, 780 days
42.6
TCGA-2Y-A9H8-01A
0 years, female, white, stage:'--, dead, 633 days
42.5
TCGA-G3-AAV1-01A
0 years, male, asian, stage:Stage IIIC, dead, 359 days
42.2
TCGA-BC-A10Z-01A
0 years, female, white, stage:Stage I, dead, 34 days
42.1
TCGA-BC-A10Y-01A
0 years, male, white, stage:'--, dead, 711 days
41.3
TCGA-DD-A4NI-01A
0 years, male, white, stage:Stage II, alive, 816 days
41.2
TCGA-DD-AAW1-01A
0 years, male, asian, stage:Stage IIIA, alive, 1989 days
40.8
TCGA-DD-A73E-01A
0 years, male, white, stage:Stage I, alive, 44 days
40.3
TCGA-QA-A7B7-01A
0 years, male, black or african american, stage:Stage II, alive, 94 days
39.8
TCGA-5C-A9VG-01A
0 years, male, white, stage:Stage II, alive, 328 days
39.6
TCGA-DD-AACS-01A
0 years, male, asian, stage:Stage I, alive, 1804 days
38.5
TCGA-DD-A73D-01A
0 years, female, white, stage:Stage II, alive, 693 days
38.3
TCGA-ED-A7PY-01A
0 years, female, asian, stage:Stage II, alive, 390 days
38.0
TCGA-G3-A25Y-01A
0 years, female, asian, stage:Stage I, dead, 452 days
37.8
TCGA-DD-AADG-01A
0 years, male, asian, stage:Stage IIIA, alive, 1145 days
37.7
TCGA-ED-A7XP-01A
0 years, female, asian, stage:Stage II, alive, 400 days
37.4
TCGA-EP-A2KB-01A
0 years, female, white, stage:Stage I, dead, 596 days
36.0
TCGA-DD-A73C-01A
0 years, female, white, stage:Stage IIIA, alive, 701 days
35.9
TCGA-DD-AAE1-01A
0 years, male, asian, stage:Stage I, alive, 552 days
35.8
TCGA-DD-AACF-01A
0 years, male, asian, stage:Stage I, dead, 365 days
35.7
TCGA-G3-A5SL-01A
0 years, male, white, stage:Stage II, alive, 621 days
35.3
TCGA-DD-A4NV-01A
0 years, male, white, stage:Stage IIIA, alive, 2398 days
35.3
TCGA-CC-A8HU-01A
0 years, female, asian, stage:Stage IIIA, dead, 344 days
35.2
TCGA-2Y-A9GU-01A
0 years, female, white, stage:Stage I, alive, 1939 days
34.9
TCGA-DD-AADY-01A
0 years, female, asian, stage:Stage I, alive, 555 days
34.7
TCGA-2Y-A9H6-01A
0 years, female, white, stage:Stage I, alive, 357 days
34.4
TCGA-DD-A73B-01A
0 years, female, white, stage:Stage I, dead, 283 days
34.3
TCGA-EP-A12J-01A
0 years, male, black or african american, stage:Stage I, alive, 570 days
34.2
TCGA-DD-AADA-01A
0 years, female, asian, stage:Stage I, alive, 1233 days
33.3
TCGA-DD-A4NJ-01A
0 years, female, white, stage:Stage II, alive, 928 days
32.7
TCGA-CC-5258-01A
0 years, male, asian, stage:Stage II, dead, 129 days
32.7
TCGA-DD-A3A8-01A
0 years, male, white, stage:Stage II, dead, 11 days
32.3
TCGA-DD-AAVY-01A
0 years, male, asian, stage:Stage IIIA, alive, 1970 days
32.1
TCGA-ZP-A9D0-01A
0 years, female, black or african american, stage:'--, alive, 1091 days
31.1
TCGA-BW-A5NO-01A
0 years, male, black or african american, stage:Stage IIIA, alive, 20 days
30.9
TCGA-BC-A5W4-01A
0 years, male, white, stage:Stage IIIA, dead, 547 days
30.8
TCGA-ZS-A9CG-01A
0 years, male, white, stage:Stage II, alive, 341 days
30.5
TCGA-RC-A7SK-01A
0 years, male, asian, stage:Stage I, alive, 472 days
30.3
TCGA-DD-A11D-01A
0 years, female, white, stage:Stage I, dead, 1560 days
30.3
TCGA-DD-AAE9-01A
0 years, male, asian, stage:Stage I, alive, 722 days
29.9
TCGA-ED-A8O6-01A
0 years, female, asian, stage:Stage IIIA, dead, 56 days
29.6
TCGA-DD-A113-01A
0 years, female, white, stage:Stage II, alive, 2425 days
29.3
TCGA-BC-A10U-01A
0 years, male, white, stage:'--, dead, 837 days
28.8
TCGA-UB-A7ME-01A
0 years, male, asian, stage:Stage I, alive, 486 days
28.8
TCGA-ZP-A9D1-01A
0 years, female, white, stage:'--, alive, 21 days
28.7
TCGA-3K-AAZ8-01A
0 years, male, black or african american, stage:Stage IIIB, alive, 396 days
28.6
TCGA-G3-AAV5-01A
0 years, male, white, stage:Stage II, alive, 354 days
28.6
TCGA-LG-A6GG-01A
0 years, female, white, stage:Stage II, alive, 387 days
28.4
TCGA-BC-A217-01A
0 years, female, white, stage:Stage II, dead, 1397 days
28.4
TCGA-WX-AA44-01A
0 years, female, white, stage:Stage I, alive, 615 days
28.1
TCGA-EP-A2KC-01A
0 years, male, black or african american, stage:Stage I, dead, 19 days
28.0
TCGA-BC-A216-01A
0 years, female, white, stage:Stage IIIA, alive, 1351 days
27.9
TCGA-ZP-A9D4-01A
0 years, female, white, stage:'--, alive, 395 days
27.5
TCGA-CC-A7IF-01A
0 years, male, asian, stage:Stage IIIA, dead, 649 days
27.4
TCGA-UB-AA0U-01A
0 years, male, white, stage:Stage II, alive, 327 days
27.4
TCGA-4R-AA8I-01A
0 years, male, white, stage:Stage II, dead, 262 days
27.3
TCGA-G3-A7M9-01A
0 years, male, white, stage:Stage IIIB, dead, 56 days
27.3
TCGA-FV-A3R2-01A
0 years, male, white, stage:Stage I, dead, 194 days
27.2
TCGA-DD-AAEA-01A
0 years, male, asian, stage:Stage I, alive, 575 days
27.2
TCGA-G3-AAV4-01A
0 years, female, white, stage:Stage I, dead, 27 days
27.2
TCGA-CC-A9FS-01A
0 years, male, asian, stage:Stage II, alive, 211 days
27.1
TCGA-2Y-A9GX-01A
0 years, male, white, stage:Stage I, alive, 2442 days
26.7
TCGA-GJ-A9DB-01A
0 years, male, white, stage:Stage I, dead, 67 days
26.7
TCGA-DD-AAW2-01A
0 years, male, asian, stage:Stage I, alive, 1855 days
26.6
TCGA-DD-AAW0-01A
0 years, male, asian, stage:Stage I, alive, 2015 days
26.1
TCGA-FV-A2QQ-01A
0 years, male, white, stage:Stage I, alive, 729 days
26.1
TCGA-DD-A4NO-01A
0 years, male, white, stage:Stage I, alive, 2245 days
26.0
TCGA-DD-AACL-01A
0 years, female, asian, stage:Stage I, dead, 107 days
26.0
TCGA-DD-AADL-01A
0 years, male, asian, stage:Stage I, alive, 636 days
25.8
TCGA-GJ-A6C0-01A
0 years, female, white, stage:Stage II, dead, 31 days
25.6
TCGA-BC-A3KF-01A
0 years, female, white, stage:Stage I, alive, 8 days
25.0
TCGA-2Y-A9GT-01A
0 years, male, white, stage:Stage I, dead, 1624 days
24.8
TCGA-WJ-A86L-01A
0 years, female, white, stage:Stage I, alive, 345 days
24.6
TCGA-DD-A73A-01A
0 years, male, white, stage:Stage I, alive, 728 days
24.3
TCGA-G3-A3CG-01A
0 years, male, white, stage:Stage I, alive, 673 days
24.2
TCGA-CC-A8HS-01A
0 years, male, asian, stage:Stage IIIC, dead, 300 days
23.7
TCGA-MR-A520-01A
0 years, male, white, stage:Stage I, alive, 229 days
23.3
TCGA-RG-A7D4-01A
0 years, male, black or african american, stage:Stage II, alive, 1098 days
23.2
TCGA-DD-AAEE-01A
0 years, male, asian, stage:Stage I, alive, 810 days
23.1
TCGA-G3-A3CK-01A
0 years, male, asian, stage:Stage I, alive, 585 days
23.1
TCGA-ZS-A9CF-01A
0 years, male, white, stage:Stage II, alive, 2412 days
22.9
TCGA-ED-A4XI-01A
0 years, male, asian, stage:Stage II, alive, 819 days
22.8
TCGA-DD-AACU-01A
0 years, male, asian, stage:Stage I, alive, 1567 days
22.8
TCGA-FV-A2QR-01A
0 years, male, white, stage:Stage I, dead, 581 days
22.8
TCGA-CC-5264-01A
0 years, male, asian, stage:Stage IIIA, dead, 102 days
22.8
TCGA-DD-AAD0-01A
0 years, female, asian, stage:Stage I, alive, 137 days
22.5
TCGA-DD-AADU-01A
0 years, male, asian, stage:Stage II, alive, 554 days
22.4
TCGA-DD-A4NS-01A
0 years, female, white, stage:Stage I, dead, 2456 days
22.4
TCGA-DD-A4ND-01A
0 years, female, white, stage:Stage I, alive, 2746 days
22.2
TCGA-DD-AAEH-01A
0 years, male, asian, stage:Stage I, alive, 784 days
21.8
TCGA-UB-A7MD-01A
0 years, male, black or african american, stage:Stage I, dead, 52 days
21.6
TCGA-DD-AAEK-01A
0 years, male, asian, stage:Stage II, alive, 1067 days
21.6
TCGA-DD-AACC-01A
0 years, male, asian, stage:Stage I, dead, 1685 days
21.5
TCGA-DD-A115-01A
0 years, male, white, stage:Stage IIIA, dead, 2542 days
21.4
TCGA-DD-AACV-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
21.4
TCGA-DD-A39X-01A
0 years, female, white, stage:Stage I, dead, 1694 days
21.4
TCGA-RC-A6M6-01A
0 years, male, white, stage:Stage II, alive, 9 days
21.3
TCGA-KR-A7K0-01A
0 years, male, white, stage:Stage I, dead, 65 days
21.3
TCGA-2Y-A9GW-01A
0 years, male, white, stage:Stage I, dead, 1271 days
21.0
TCGA-DD-AAEI-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
21.0
TCGA-DD-AAW3-01A
0 years, male, asian, stage:Stage I, alive, 1633 days
20.8
TCGA-DD-A118-01A
0 years, female, white, stage:Stage II, alive, 3437 days
20.8
TCGA-CC-A7IL-01A
0 years, male, asian, stage:Stage IIIA, dead, 278 days
20.7
TCGA-G3-AAV3-01A
0 years, female, white, stage:Stage II, alive, 412 days
20.6
TCGA-MI-A75G-01A
0 years, male, white, stage:Stage II, alive, 698 days
20.6
TCGA-ZP-A9CY-01A
0 years, female, white, stage:'--, alive, 782 days
20.5
TCGA-RC-A6M4-01A
0 years, female, white, stage:Stage IIIA, alive, 22 days
20.5
TCGA-ED-A66X-01A
0 years, male, asian, stage:Stage IIIA, alive, 406 days
20.5
TCGA-G3-A3CJ-01A
0 years, male, american indian or alaska native, stage:Stage II, alive, 594 days
20.3
TCGA-YA-A8S7-01A
0 years, male, white, stage:Stage IIIA, dead, 412 days
20.2
TCGA-ZP-A9D2-01A
0 years, male, white, stage:'--, dead, 765 days
20.2
TCGA-DD-A1EL-01A
0 years, male, black or african american, stage:Stage II, dead, 415 days
20.0
TCGA-DD-AACQ-01A
0 years, male, asian, stage:Stage II, dead, 432 days
19.9
TCGA-DD-A1EG-01A
0 years, male, white, stage:Stage I, dead, 1372 days
19.8
TCGA-ZP-A9CV-01A
0 years, male, white, stage:'--, dead, 1088 days
19.7
TCGA-BC-A69I-01A
0 years, male, white, stage:Stage I, alive, 387 days
19.7
TCGA-DD-AAD3-01A
0 years, male, asian, stage:Stage I, alive, 1295 days
19.6
TCGA-DD-AAEG-01A
0 years, female, asian, stage:Stage I, alive, 719 days
19.6
TCGA-DD-A4NA-01A
0 years, female, white, stage:Stage IIIC, alive, 1008 days
19.5
TCGA-ED-A5KG-01A
0 years, female, asian, stage:Stage II, alive, 854 days
19.5
TCGA-FV-A496-01A
0 years, female, white, stage:Stage I, alive, 10 days
19.4
TCGA-CC-A8HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 140 days
19.3
TCGA-MI-A75H-01A
0 years, male, white, stage:'--, alive, 747 days
18.8
TCGA-G3-A7M5-01A
0 years, male, asian, stage:Stage I, alive, 447 days
18.8
TCGA-ZS-A9CD-01A
0 years, male, white, stage:Stage II, dead, 1386 days
18.5
TCGA-DD-AACN-01A
0 years, male, asian, stage:Stage I, alive, 1302 days
18.2
TCGA-RC-A7SH-01A
0 years, male, asian, stage:Stage II, alive, 468 days
18.0
TCGA-RC-A7SB-01A
0 years, male, asian, stage:Stage II, alive, 588 days
17.9
TCGA-HP-A5N0-01A
0 years, female, stage:'--, dead, 752 days
17.9
TCGA-DD-AACJ-01A
0 years, male, asian, stage:Stage II, alive, 2102 days
17.9
TCGA-DD-A3A4-01A
0 years, male, white, stage:Stage IIIA, dead, 612 days
17.8
TCGA-DD-AADJ-01A
0 years, female, asian, stage:Stage I, alive, 1066 days
17.7
TCGA-FV-A495-01A
0 years, female, white, stage:Stage II, alive, 1 days
17.6
TCGA-DD-AACX-01A
0 years, male, asian, stage:Stage II, alive, 170 days
17.3
TCGA-T1-A6J8-01A
0 years, male, white, stage:'--, alive, 23 days
17.3
TCGA-NI-A8LF-01A
0 years, male, white, stage:Stage I, alive, 799 days
17.2
TCGA-XR-A8TD-01A
0 years, female, white, stage:Stage IIIB, alive, 1030 days
17.1
TCGA-FV-A3I1-01A
0 years, female, white, stage:Stage II, dead, 247 days
17.0
TCGA-CC-5263-01A
0 years, male, asian, stage:Stage IIIA, dead, 129 days
16.8
TCGA-DD-A4NH-01A
0 years, female, white, stage:Stage IIIB, alive, 917 days
16.7
TCGA-ED-A8O5-01A
0 years, female, asian, stage:Stage IIIA, alive, 406 days
16.6
TCGA-DD-A73F-01A
0 years, female, white, stage:Stage I, alive, 1085 days
16.6
TCGA-ED-A7XO-01A
0 years, male, asian, stage:Stage IIIA, alive, 427 days
16.4
TCGA-BC-A10R-01A
0 years, female, white, stage:'--, dead, 308 days
16.3
TCGA-CC-5261-01A
0 years, male, asian, stage:Stage II, dead, 97 days
16.1
TCGA-2Y-A9H0-01A
0 years, male, white, stage:Stage IIIA, alive, 3675 days
16.0
TCGA-DD-AAED-01A
0 years, male, asian, stage:Stage I, alive, 763 days
16.0
TCGA-MI-A75E-01A
0 years, male, white, stage:Stage IIIC, alive, 507 days
16.0
TCGA-G3-A25S-01A
0 years, male, white, stage:Stage I, dead, 416 days
16.0
TCGA-MI-A75I-01A
0 years, male, black or african american, stage:'--, alive, 630 days
15.9
TCGA-G3-A5SK-01A
0 years, male, white, stage:Stage I, alive, 744 days
15.9
TCGA-DD-AADR-01A
0 years, male, asian, stage:Stage I, alive, 2028 days
15.9
TCGA-RC-A6M5-01A
0 years, female, white, stage:Stage IVA, alive, 15 days
15.8
TCGA-DD-A4NB-01A
0 years, male, white, stage:Stage I, alive, 989 days
15.7
TCGA-DD-AAVP-01A
0 years, male, asian, stage:Stage I, alive, 2752 days
15.5
TCGA-ZS-A9CE-01A
0 years, female, white, stage:Stage II, alive, 1241 days
15.3
TCGA-DD-A4NR-01A
0 years, female, white, stage:Stage I, dead, 9 days
15.2
TCGA-DD-A1EC-01A
0 years, female, white, stage:Stage I, alive, 602 days
15.1
TCGA-5C-A9VH-01A
0 years, male, white, stage:Stage I, alive, 322 days
15.1
TCGA-CC-A1HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 101 days
15.1
TCGA-DD-AACB-01A
0 years, female, asian, stage:Stage I, alive, 2324 days
15.0
TCGA-DD-A4NE-01A
0 years, female, white, stage:Stage IIIA, dead, 660 days
14.9
TCGA-DD-A114-01A
0 years, male, black or african american, stage:Stage II, dead, 1149 days
14.9
TCGA-DD-AAVQ-01A
0 years, male, asian, stage:Stage I, alive, 2728 days
14.4
TCGA-DD-AADC-01A
0 years, male, asian, stage:Stage I, dead, 425 days
14.4
TCGA-G3-AAV7-01A
0 years, male, asian, stage:Stage II, alive, 361 days
14.4
TCGA-DD-AADF-01A
0 years, female, asian, stage:Stage I, dead, 115 days
14.3
TCGA-EP-A2KA-01A
0 years, female, white, stage:Stage IIIA, dead, 627 days
14.1
TCGA-HP-A5MZ-01A
0 years, male, stage:Stage I, dead, 91 days
14.1
TCGA-2Y-A9HB-01A
0 years, male, stage:Stage I, alive, 260 days
14.0
TCGA-5R-AAAM-01A
0 years, female, white, stage:Stage II, dead, 46 days
13.9
TCGA-KR-A7K2-01A
0 years, male, white, stage:Stage I, alive, 829 days
13.9
TCGA-BD-A3EP-01A
0 years, female, black or african american, stage:Stage I, alive, 409 days
13.8
TCGA-DD-A1ED-01A
0 years, male, white, stage:Stage I, alive, 2301 days
13.7
TCGA-DD-AAE7-01A
0 years, male, asian, stage:Stage I, alive, 644 days
13.5
TCGA-CC-A7IE-01A
0 years, male, asian, stage:Stage IIIA, dead, 217 days
13.4
TCGA-2Y-A9GS-01A
0 years, male, white, stage:'--, dead, 724 days
13.3
TCGA-5C-AAPD-01A
0 years, male, asian, stage:Stage II, alive, 20 days
13.3
TCGA-EP-A3JL-01A
0 years, male, white, stage:Stage I, alive, 303 days
13.0
TCGA-G3-A5SM-01A
0 years, male, white, stage:Stage II, alive, 520 days
13.0
TCGA-KR-A7K7-01A
0 years, female, white, stage:Stage II, alive, 951 days
13.0
TCGA-2Y-A9H5-01A
0 years, female, white, stage:Stage I, dead, 555 days
13.0
TCGA-DD-AAVR-01A
0 years, male, asian, stage:Stage I, alive, 2513 days
12.9
TCGA-G3-A7M6-01A
0 years, female, white, stage:Stage I, alive, 632 days
12.7
TCGA-G3-AAUZ-01A
0 years, male, stage:Stage I, alive, 480 days
12.6
TCGA-DD-AAVX-01A
0 years, male, asian, stage:Stage II, alive, 1718 days
12.5
TCGA-G3-A25Z-01A
0 years, male, asian, stage:Stage I, alive, 655 days
12.5
TCGA-CC-A5UE-01A
0 years, male, asian, stage:Stage IIIB, dead, 272 days
12.1
TCGA-DD-AAD8-01A
0 years, female, asian, stage:Stage I, alive, 1219 days
12.1
TCGA-UB-A7MF-01A
0 years, male, white, stage:Stage IIIA, dead, 214 days
12.1
TCGA-CC-A3MB-01A
0 years, male, asian, stage:Stage IIIA, dead, 315 days
12.1
TCGA-RC-A7SF-01A
0 years, male, asian, stage:Stage I, alive, 579 days
12.0
TCGA-GJ-A3OU-01A
0 years, male, white, stage:Stage I, alive, 879 days
11.9
TCGA-K7-A5RF-01A
0 years, male, white, stage:Stage I, alive, 631 days
11.9
TCGA-DD-AAD1-01A
0 years, female, asian, stage:Stage I, alive, 564 days
11.7
TCGA-O8-A75V-01A
0 years, male, stage:Stage I, alive, 538 days
11.5
TCGA-DD-AADB-01A
0 years, male, asian, stage:Stage I, alive, 1242 days
11.4
TCGA-DD-A1EK-01A
0 years, female, white, stage:Stage IVB, dead, 558 days
11.4
TCGA-RC-A7S9-01A
0 years, female, asian, stage:Stage I, alive, 640 days
11.1
TCGA-DD-A4NQ-01A
0 years, male, white, stage:Stage II, dead, 373 days
11.1
TCGA-K7-A6G5-01A
0 years, male, white, stage:Stage I, alive, 512 days
11.0
TCGA-DD-AAD2-01A
0 years, male, asian, stage:Stage I, alive, 658 days
11.0
TCGA-WX-AA46-01A
0 years, male, white, stage:Stage II, alive, 756 days
10.9
TCGA-CC-A9FW-01A
0 years, male, asian, stage:Stage IIIA, alive, 248 days
10.9
TCGA-FV-A23B-01A
0 years, female, white, stage:Stage II, dead, 1852 days
10.7
TCGA-G3-A7M8-01A
0 years, male, asian, stage:Stage I, alive, 430 days
10.7
TCGA-NI-A4U2-01A
0 years, male, white, stage:Stage IIIA, dead, 1791 days
10.7
TCGA-EP-A3RK-01A
0 years, male, white, stage:Stage IIIA, alive, 363 days
10.7
TCGA-DD-A116-01A
0 years, male, asian, stage:Stage IIIA, dead, 1622 days
10.7
TCGA-BC-A10S-01A
0 years, male, white, stage:'--, dead, 1423 days
10.6
TCGA-DD-AACZ-01A
0 years, female, asian, stage:Stage I, dead, 171 days
10.6
TCGA-DD-A39V-01A
0 years, male, white, stage:Stage II, dead, 643 days
10.5
TCGA-DD-AAC9-01A
0 years, male, asian, stage:Stage I, alive, 347 days
10.4
TCGA-DD-A3A2-01A
0 years, female, white, stage:Stage I, dead, 2131 days
10.4
TCGA-G3-A3CI-01A
0 years, male, white, stage:Stage I, alive, 180 days
10.4
TCGA-DD-A3A5-01A
0 years, female, white, stage:Stage III, dead, 3125 days
10.2
TCGA-BC-A112-01A
0 years, male, white, stage:'--, dead, 153 days
10.1
TCGA-CC-5262-01A
0 years, male, asian, stage:Stage IIIC, dead, 103 days
10.1
TCGA-K7-A5RG-01A
0 years, male, black or african american, stage:Stage I, alive, 519 days
10.1
TCGA-DD-A4NN-01A
0 years, female, white, stage:Stage I, dead, 899 days
10.0
TCGA-G3-A7M7-01A
0 years, male, white, stage:Stage I, alive, 361 days
9.9
TCGA-UB-AA0V-01A
0 years, female, white, stage:Stage I, alive, 314 days
9.8
TCGA-DD-A119-01A
0 years, male, asian, stage:Stage IV, dead, 223 days
9.8
TCGA-DD-A1EH-01A
0 years, male, white, stage:Stage III, alive, 1495 days
9.8
TCGA-DD-AAD6-01A
0 years, male, asian, stage:Stage IIIA, alive, 672 days
9.7
TCGA-ED-A66Y-01A
0 years, female, asian, stage:Stage IIIA, dead, 296 days
9.6
TCGA-MI-A75C-01A
0 years, male, white, stage:Stage I, alive, 291 days
9.6
TCGA-ED-A7PZ-01A
0 years, male, asian, stage:Stage II, alive, 6 days
9.6
TCGA-DD-AAVU-01A
0 years, male, asian, stage:Stage II, alive, 2202 days
9.4
TCGA-BD-A2L6-01A
0 years, male, white, stage:'--, alive, 1363 days
9.4
TCGA-DD-AAE4-01A
0 years, female, asian, stage:Stage I, alive, 608 days
9.3
TCGA-DD-A1EI-01A
0 years, male, asian, stage:Stage I, alive, 183 days
9.2
TCGA-ED-A459-01A
0 years, male, asian, stage:Stage II, alive, 910 days
8.8
TCGA-DD-AAE2-01A
0 years, male, asian, stage:Stage I, alive, 638 days
8.6
TCGA-BC-A10T-01A
0 years, male, white, stage:'--, dead, 837 days
8.4
TCGA-CC-A8HV-01A
0 years, female, asian, stage:Stage II, dead, 279 days
8.4
TCGA-CC-A5UC-01A
0 years, male, asian, stage:Stage IIIA, dead, 347 days
8.3
TCGA-K7-AAU7-01A
0 years, male, white, stage:Stage II, alive, 359 days
8.3
TCGA-DD-A4NG-01A
0 years, male, white, stage:Stage IIIA, dead, 802 days
8.2
TCGA-2Y-A9H3-01A
0 years, male, white, stage:Stage II, alive, 1516 days
8.2
TCGA-CC-A7IG-01A
0 years, male, asian, stage:Stage II, dead, 299 days
8.2
TCGA-2Y-A9H4-01A
0 years, male, black or african american, stage:Stage I, alive, 1452 days
8.2
TCGA-DD-AAD5-01A
0 years, male, asian, stage:Stage I, alive, 1345 days
8.1
TCGA-FV-A3I0-01A
0 years, female, white, stage:Stage II, alive, 848 days
8.1
TCGA-2Y-A9H2-01A
0 years, female, white, stage:Stage I, alive, 1731 days
8.1
TCGA-2Y-A9GY-01A
0 years, female, white, stage:Stage II, dead, 757 days
8.1
TCGA-DD-AADM-01A
0 years, male, asian, stage:Stage II, dead, 12 days
8.1
TCGA-UB-A7MA-01A
0 years, female, white, stage:Stage II, alive, 848 days
8.0
TCGA-FV-A4ZQ-01A
0 years, male, white, stage:Stage I, alive, 12 days
8.0
TCGA-G3-AAV6-01A
0 years, female, white, stage:Stage IIIA, dead, 65 days
7.9
TCGA-DD-AACO-01A
0 years, male, asian, stage:Stage I, alive, 1876 days
7.9
TCGA-2Y-A9GV-01A
0 years, female, white, stage:Stage I, dead, 2532 days
7.8
TCGA-ED-A627-01A
0 years, male, white, stage:Stage I, alive, 423 days
7.8
TCGA-G3-A25V-01A
0 years, male, white, stage:Stage I, alive, 860 days
7.7
TCGA-DD-AACK-01A
0 years, male, asian, stage:Stage I, alive, 9 days
7.7
TCGA-DD-A39Y-01A
0 years, male, asian, stage:Stage I, dead, 171 days
7.7
TCGA-DD-AADW-01A
0 years, male, asian, stage:Stage I, alive, 587 days
7.5
TCGA-DD-AAVV-01A
0 years, male, asian, stage:Stage II, alive, 2455 days
7.5
TCGA-PD-A5DF-01A
0 years, female, white, stage:Stage IIIB, dead, 639 days
7.5
TCGA-DD-A4NP-01A
0 years, male, white, stage:Stage I, alive, 3308 days
7.4
TCGA-DD-A3A3-01A
0 years, male, asian, stage:Stage I, dead, 535 days
7.3
TCGA-5R-AA1D-01A
0 years, female, white, stage:Stage IIIA, alive, 449 days
7.2
TCGA-ES-A2HT-01A
0 years, male, black or african american, stage:Stage I, dead, 438 days
7.2
TCGA-DD-AAE3-01A
0 years, male, asian, stage:Stage I, alive, 566 days
7.1
TCGA-G3-AAV0-01A
0 years, male, asian, stage:Stage I, alive, 476 days
7.0
TCGA-DD-AAEB-01A
0 years, male, asian, stage:Stage I, alive, 478 days
7.0
TCGA-DD-AADI-01A
0 years, female, asian, stage:Stage I, alive, 1085 days
7.0
TCGA-DD-A39Z-01A
0 years, female, stage:Stage II, dead, 601 days
6.9
TCGA-BC-A10Q-01A
0 years, female, white, stage:'--, dead, 1135 days
6.8
TCGA-DD-AACP-01A
0 years, male, asian, stage:Stage I, alive, 415 days
6.8
TCGA-DD-AADK-01A
0 years, female, asian, stage:Stage II, alive, 1049 days
6.7
TCGA-DD-A4NL-01A
0 years, male, white, stage:Stage I, alive, 1711 days
6.6
TCGA-LG-A9QD-01A
0 years, male, white, stage:Stage IIIA, alive, 366 days
6.5
TCGA-ED-A82E-01A
0 years, female, asian, stage:Stage IIIA, alive, 408 days
6.4
TCGA-BC-A10X-01A
0 years, female, white, stage:Stage IIIA, dead, 770 days
6.3
TCGA-DD-AACY-01A
0 years, male, asian, stage:Stage I, alive, 1450 days
6.2
TCGA-G3-A25T-01A
0 years, female, white, stage:Stage IIIA, alive, 1553 days
6.2
TCGA-ES-A2HS-01A
0 years, male, white, stage:Stage I, dead, 688 days
6.1
TCGA-DD-AA3A-01A
0 years, female, white, stage:Stage I, dead, 410 days
5.7
TCGA-WQ-AB4B-01A
0 years, male, white, stage:Stage II, alive, 395 days
5.7
TCGA-DD-AACG-01A
0 years, male, asian, stage:Stage II, dead, 469 days
5.5
TCGA-WX-AA47-01A
0 years, female, white, stage:Stage IIIA, dead, 556 days
5.4
TCGA-ED-A97K-01A
0 years, male, asian, stage:Stage IIIA, alive, 6 days
5.4
TCGA-BD-A3ER-01A
0 years, male, white, stage:Stage II, alive, 1115 days
5.2
TCGA-DD-A3A7-01A
0 years, male, stage:Stage IIIB, dead, 419 days
5.2
TCGA-DD-A1EJ-01A
0 years, female, white, stage:Stage IIIC, dead, 1005 days
5.0
TCGA-G3-A25X-01A
0 years, male, asian, stage:Stage II, alive, 1779 days
4.7
TCGA-DD-AACI-01A
0 years, male, asian, stage:Stage II, alive, 1618 days
4.6
TCGA-CC-5260-01A
0 years, female, asian, stage:Stage IIIC, dead, 87 days
4.6
TCGA-DD-A3A9-01A
0 years, female, white, stage:Stage IVB, dead, 931 days
4.3
TCGA-DD-AACT-01A
0 years, female, asian, stage:Stage I, alive, 1562 days
4.1
TCGA-BC-A110-01A
0 years, female, black or african american, stage:'--, dead, 2116 days
4.0
TCGA-DD-AACD-01A
0 years, male, asian, stage:Stage I, dead, 381 days
4.0
TCGA-ED-A7PX-01A
0 years, female, asian, stage:Stage II, alive, 6 days
3.6
TCGA-MR-A8JO-01A
0 years, male, white, stage:Stage I, alive, 330 days
3.4
TCGA-DD-A3A1-01A
0 years, male, stage:Stage IIIA, dead, 233 days
3.3
TCGA-CC-A5UD-01A
0 years, male, asian, stage:Stage IIIA, dead, 304 days
3.2
TCGA-DD-AADN-01A
0 years, male, asian, stage:Stage I, alive, 898 days
3.1
TCGA-WQ-A9G7-01A
0 years, female, white, stage:'--, alive, 30 days
3.1
TCGA-DD-A73G-01A
0 years, female, white, stage:Stage I, alive, 3478 days
3.1
TCGA-CC-A3M9-01A
0 years, male, asian, stage:Stage IIIA, dead, 300 days
3.0
TCGA-DD-AAE0-01A
0 years, female, asian, stage:Stage IIIA, alive, 555 days
2.8
TCGA-DD-AADQ-01A
0 years, male, asian, stage:Stage II, alive, 436 days
2.8
TCGA-DD-AADS-01A
0 years, male, asian, stage:Stage I, alive, 474 days
2.6
TCGA-2Y-A9H1-01A
0 years, male, white, stage:Stage I, dead, 1229 days
2.5
TCGA-G3-A5SJ-01A
0 years, male, white, stage:Stage I, alive, 698 days
2.3
TCGA-CC-A7IJ-01A
0 years, male, asian, stage:Stage II, alive, 382 days
2.3
TCGA-DD-AADO-01A
0 years, male, asian, stage:Stage I, alive, 453 days
2.1
TCGA-CC-5259-01A
0 years, female, asian, stage:Stage IIIC, alive, 250 days
1.7
TCGA-CC-A123-01A
0 years, female, asian, stage:Stage IIIA, alive, 219 days
1.6
TCGA-BC-A69H-01A
0 years, male, white, stage:Stage II, alive, 444 days
1.2
TCGA-FV-A4ZP-01A
0 years, male, white, stage:Stage IIIA, dead, 2486 days
1.0
TCGA-CC-A3MA-01A
0 years, male, asian, stage:Stage IIIA, dead, 303 days
1.0
TCGA-DD-A3A6-01A
0 years, female, white, stage:Stage II, dead, 3258 days
1.0
TCGA-CC-A7II-01A
0 years, male, asian, stage:Stage IIIA, alive, 399 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
IL6R is not prognostic in Liver Hepatocellular Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
26.5
Number of samples
231
Samples
Sample
Description
TPM
DO45253
0 years, male, NA, stage:2, alive, 870 days
134.2
DO23509
0 years, male, NA, stage:3, dead, 780 days
113.1
DO45237
0 years, male, NA, stage:2, alive, 900 days
112.5
DO23528
0 years, female, NA, stage:2, alive, 1020 days
103.0
DO45117
0 years, female, NA, stage:2, dead, 1110 days
102.8
DO50817
0 years, male, NA, stage:2, alive, 390 days
102.3
DO23533
0 years, male, NA, stage:2, alive, 900 days
92.5
DO50816
0 years, male, NA, stage:2, alive, 390 days
83.3
DO23516
0 years, male, NA, stage:3, dead, 20 days
78.2
DO45171
0 years, male, NA, stage:3, alive, 600 days
77.4
DO50844
0 years, male, NA, stage:4, alive, 300 days
71.7
DO48746
0 years, male, NA, stage:3, alive, 570 days
71.4
DO23512
0 years, male, NA, stage:1, alive, 1260 days
68.8
DO45115
0 years, male, NA, stage:2, alive, 840 days
66.3
DO45197
0 years, male, NA, stage:2, alive, 1170 days
63.4
DO45209
0 years, male, NA, stage:4, alive, 1350 days
63.0
DO45175
0 years, male, NA, stage:2, alive, 1140 days
60.8
DO23513
0 years, male, NA, stage:3, alive, 1200 days
60.2
DO45225
0 years, male, NA, stage:1, alive, 1050 days
59.0
DO45125
0 years, male, NA, stage:3, alive, 1680 days
55.8
DO45133
0 years, male, NA, stage:3, dead, 660 days
55.3
DO48706
0 years, male, NA, stage:2, alive, 870 days
55.1
DO45193
0 years, female, NA, stage:4, dead, 120 days
53.4
DO50809
0 years, male, NA, stage:3, dead, 720 days
53.3
DO23529
0 years, male, NA, stage:4, alive, 930 days
52.7
DO45131
0 years, male, NA, stage:4, dead, 360 days
52.6
DO48732
0 years, male, NA, stage:3, alive, 630 days
52.5
DO45257
0 years, male, NA, stage:3, alive, 810 days
52.2
DO45123
0 years, female, NA, stage:2, dead, 570 days
51.7
DO45113
0 years, male, NA, stage:3, alive, 1560 days
50.5
DO23536
0 years, male, NA, stage:2, alive, 930 days
49.0
DO45163
0 years, male, NA, stage:2, alive, 960 days
49.0
DO45207
0 years, male, NA, stage:1, alive, 1050 days
48.6
DO45096
0 years, male, NA, stage:2, dead, 1290 days
48.3
DO50802
0 years, male, NA, stage:2, alive, 930 days
46.8
DO50814
0 years, male, NA, stage:3, alive, 420 days
46.5
DO45191
0 years, female, NA, stage:2, alive, 1200 days
46.3
DO50859
0 years, male, NA, stage:2, alive, 180 days
45.8
DO48721
0 years, female, NA, stage:1, alive, 900 days
44.5
DO48672
0 years, male, NA, stage:2, alive, 450 days
42.1
DO23541
0 years, male, NA, stage:2, alive, 930 days
41.1
DO23543
0 years, male, NA, stage:2, alive, 1020 days
41.0
DO45159
0 years, male, NA, stage:3, alive, 1470 days
40.6
DO23537
0 years, male, NA, stage:2, dead, 900 days
40.2
DO45141
0 years, male, NA, stage:2, alive, 1320 days
38.8
DO23534
0 years, male, NA, stage:2, alive, 840 days
38.7
DO23548
0 years, female, NA, stage:1, alive, 840 days
38.5
DO48695
0 years, male, NA, stage:2, alive, 720 days
38.3
DO45179
0 years, female, NA, stage:2, alive, 600 days
37.8
DO23511
0 years, female, NA, stage:3, dead, 180 days
37.5
DO45099
0 years, male, NA, stage:3, alive, 1590 days
36.5
DO50857
0 years, male, NA, stage:2, alive, 210 days
36.5
DO50799
0 years, female, NA, stage:2, alive, 540 days
35.7
DO45227
0 years, female, NA, stage:2, alive, 1020 days
35.4
DO45217
0 years, female, NA, stage:3, dead, 270 days
35.3
DO48677
0 years, male, NA, stage:3, alive, 1140 days
35.3
DO45121
0 years, male, NA, stage:3, alive, 1530 days
34.7
DO23521
0 years, male, NA, stage:3, alive, 1110 days
34.2
DO45187
0 years, female, NA, stage:1, alive, 1260 days
33.5
DO45105
0 years, male, NA, stage:1, alive, 1680 days
33.4
DO45215
0 years, male, NA, stage:2, alive, 1170 days
33.3
DO45091
0 years, male, NA, stage:2, dead, 1320 days
32.6
DO48736
0 years, female, NA, stage:1, alive, 600 days
32.3
DO45111
0 years, male, NA, stage:2, alive, 1590 days
32.3
DO45265
0 years, male, NA, stage:3, alive, 1020 days
32.2
DO23545
0 years, male, NA, stage:2, dead, 570 days
31.7
DO23532
0 years, female, NA, stage:1, alive, 960 days
31.6
DO45247
0 years, female, NA, stage:2, alive, 210 days
31.4
DO45101
0 years, male, NA, stage:2, alive, 1680 days
30.9
DO48681
0 years, male, NA, stage:2, alive, 900 days
30.6
DO45273
0 years, male, NA, stage:2, alive, 480 days
30.4
DO50783
0 years, male, NA, stage:3, alive, 480 days
29.8
DO45203
0 years, female, NA, stage:2, alive, 1170 days
29.7
DO48723
0 years, male, NA, stage:1, alive, 600 days
29.6
DO45107
0 years, female, NA, stage:2, alive, 1710 days
29.2
DO50820
0 years, female, NA, stage:3, alive, 510 days
29.1
DO50791
0 years, female, NA, stage:1, dead, 480 days
28.5
DO23538
0 years, male, NA, stage:2, alive, 450 days
28.1
DO48704
0 years, female, NA, stage:3, alive, 750 days
28.1
DO45281
0 years, male, NA, stage:4, alive, 750 days
27.8
DO45097
0 years, male, NA, stage:3, alive, 1620 days
27.3
DO50829
0 years, male, NA, stage:3, alive, 570 days
26.8
DO45235
0 years, female, NA, stage:1, alive, 900 days
26.6
DO23552
0 years, female, NA, stage:1, alive, 810 days
26.6
DO45219
0 years, male, NA, stage:2, alive, 1080 days
26.5
DO50793
0 years, male, NA, stage:4, alive, 540 days
25.7
DO45261
0 years, male, NA, stage:3, alive, 990 days
25.4
DO45199
0 years, female, NA, stage:2, alive, 1350 days
25.1
DO45267
0 years, male, NA, stage:3, dead, 570 days
24.9
DO45263
0 years, male, NA, stage:3, dead, 270 days
24.6
DO45095
0 years, male, NA, stage:2, alive, 1620 days
24.3
DO45149
0 years, female, NA, stage:2, alive, 1260 days
24.1
DO45161
0 years, male, NA, stage:2, dead, 540 days
23.7
DO45183
0 years, female, NA, stage:2, dead, 570 days
23.5
DO50813
0 years, male, NA, stage:2, alive, 420 days
23.4
DO45229
0 years, male, NA, stage:1, alive, 990 days
23.1
DO48715
0 years, female, NA, stage:2, dead, 690 days
23.1
DO48727
0 years, female, NA, stage:2, dead, 390 days
23.1
DO227643
0 years, male, NA, stage:2, alive, 1260 days
22.7
DO45153
0 years, female, NA, stage:2, alive, 1380 days
22.3
DO45169
0 years, male, NA, stage:3, alive, 1350 days
22.2
DO23539
0 years, male, NA, stage:1, alive, 1110 days
22.1
DO50798
0 years, male, NA, stage:3, dead, 30 days
21.9
DO23524
0 years, female, NA, stage:2, alive, 1050 days
21.7
DO45275
0 years, male, NA, stage:3, dead, 10 days
21.6
DO48743
0 years, female, NA, stage:2, alive, 570 days
21.2
DO48701
0 years, male, NA, stage:2, alive, 780 days
20.9
DO23508
0 years, female, NA, stage:2, alive, 390 days
20.7
DO50819
0 years, female, NA, stage:2, alive, 510 days
20.5
DO45129
0 years, male, NA, stage:3, alive, 1470 days
20.5
DO48751
0 years, male, NA, stage:2, dead, 480 days
20.3
DO45094
0 years, male, NA, stage:3, alive, 1650 days
20.3
DO48725
0 years, male, NA, stage:1, alive, 780 days
20.2
DO50803
0 years, female, NA, stage:1, alive, 540 days
20.0
DO50800
0 years, male, NA, stage:2, alive, 510 days
19.9
DO48757
0 years, female, NA, stage:3, alive, 480 days
19.7
DO50811
0 years, male, NA, stage:1, alive, 450 days
19.7
DO45173
0 years, male, NA, stage:3, alive, 1170 days
19.6
DO23527
0 years, male, NA, stage:1, alive, 1050 days
19.5
DO48719
0 years, male, NA, stage:2, alive, 690 days
19.5
DO50845
0 years, male, NA, stage:3, alive, 210 days
19.4
DO23517
0 years, male, NA, stage:2, alive, 1200 days
19.2
DO23514
0 years, male, NA, stage:2, alive, 1290 days
19.2
DO45139
0 years, male, NA, stage:3, alive, 1320 days
19.0
DO50787
0 years, male, NA, stage:3, alive, 480 days
18.5
DO23518
0 years, male, NA, stage:2, alive, 1320 days
18.4
DO45165
0 years, male, NA, stage:2, alive, 690 days
18.2
DO48742
0 years, male, NA, stage:2, alive, 600 days
18.0
DO23510
0 years, female, NA, stage:2, alive, 870 days
18.0
DO50774
0 years, female, NA, stage:2, alive, 720 days
17.9
DO48741
0 years, male, NA, stage:3, alive, 240 days
17.8
DO48716
0 years, male, NA, stage:2, alive, 720 days
17.7
DO23546
0 years, male, NA, stage:2, alive, 1050 days
17.7
DO48679
0 years, male, NA, stage:2, alive, 1200 days
17.5
DO23525
0 years, male, NA, stage:4, alive, 1050 days
17.5
DO45213
0 years, male, NA, stage:1, alive, 1200 days
17.2
DO23540
0 years, male, NA, stage:1, alive, 750 days
17.0
DO50825
0 years, male, NA, stage:2, alive, 390 days
16.9
DO48697
0 years, female, NA, stage:2, dead, 810 days
16.8
DO45103
0 years, male, NA, stage:3, alive, 450 days
16.8
DO45201
0 years, male, NA, stage:1, alive, 900 days
16.4
DO48737
0 years, male, NA, stage:1, alive, 720 days
16.3
DO45157
0 years, male, NA, stage:2, alive, 1980 days
16.3
DO45221
0 years, female, NA, stage:4, dead, 390 days
16.0
DO48682
0 years, female, NA, stage:3, dead, 120 days
16.0
DO45255
0 years, male, NA, stage:3, alive, 720 days
15.4
DO45231
0 years, male, NA, stage:2, alive, 930 days
14.8
DO23550
0 years, male, NA, stage:1, alive, 990 days
14.7
DO23519
0 years, male, NA, stage:3, alive, 630 days
14.7
DO23542
0 years, male, NA, stage:3, alive, 960 days
14.7
DO50785
0 years, male, NA, stage:4, dead, 90 days
14.6
DO50832
0 years, male, NA, stage:3, alive, 90 days
14.5
DO45177
0 years, female, NA, stage:3, alive, 1260 days
14.4
DO23535
0 years, male, NA, stage:1, alive, 960 days
14.3
DO45137
0 years, male, NA, stage:1, alive, 1320 days
14.0
DO45269
0 years, male, NA, stage:3, alive, 750 days
13.8
DO48717
0 years, male, NA, stage:4, dead, 180 days
13.8
DO48674
0 years, male, NA, stage:2, alive, 1260 days
13.6
DO48760
0 years, female, NA, stage:2, alive, 690 days
13.4
DO45223
0 years, male, NA, stage:4, alive, 1020 days
13.3
DO50789
0 years, female, NA, stage:2, alive, 570 days
13.1
DO23523
0 years, male, NA, stage:3, alive, 1080 days
13.0
DO48728
0 years, female, NA, stage:2, alive, 150 days
12.9
DO23549
0 years, male, NA, stage:3, alive, 990 days
12.8
DO50804
0 years, male, NA, stage:2, alive, 720 days
12.8
DO50818
0 years, male, NA, stage:2, alive, 510 days
12.7
DO50776
0 years, male, NA, stage:1, alive, 690 days
12.6
DO48730
0 years, female, NA, stage:2, alive, 630 days
12.3
DO50807
0 years, male, NA, stage:1, alive, 540 days
12.1
DO45145
0 years, male, NA, stage:3, dead, 60 days
12.0
DO48700
0 years, female, NA, stage:2, alive, 810 days
11.9
DO48693
0 years, male, NA, stage:2, alive, 900 days
11.8
DO23547
0 years, male, NA, stage:1, alive, 1020 days
11.7
DO45241
0 years, male, NA, stage:1, alive, 1080 days
11.6
DO50815
0 years, male, NA, stage:3, alive, 150 days
11.5
DO45135
0 years, male, NA, stage:1, alive, 1410 days
11.5
DO50806
0 years, male, NA, stage:4, alive, 540 days
11.3
DO23526
0 years, male, NA, stage:3, alive, 1050 days
11.3
DO48747
0 years, male, NA, stage:3, alive, 540 days
11.0
DO50840
0 years, male, NA, stage:2, alive, 330 days
10.9
DO50778
0 years, male, NA, stage:4, alive, 630 days
10.9
DO45092
0 years, male, NA, stage:4, dead, 1200 days
10.8
DO45093
0 years, male, NA, stage:2, dead, 720 days
10.7
DO48733
0 years, male, NA, stage:2, alive, 600 days
10.7
DO45243
0 years, female, NA, stage:3, alive, 930 days
10.0
DO45195
0 years, male, NA, stage:1, alive, 390 days
9.8
DO45119
0 years, male, NA, stage:3, dead, 510 days
9.6
DO23531
0 years, female, NA, stage:3, alive, 900 days
9.5
DO45277
0 years, male, NA, stage:3, alive, 600 days
9.5
DO50822
0 years, male, NA, stage:2, alive, 510 days
9.5
DO48720
0 years, female, NA, stage:2, alive, 570 days
9.4
DO45143
0 years, male, NA, stage:3, alive, 1290 days
9.2
DO45239
0 years, male, NA, stage:2, alive, 870 days
9.0
DO50839
0 years, female, NA, stage:3, alive, 330 days
8.9
DO45109
0 years, male, NA, stage:2, alive, 1590 days
8.8
DO48712
0 years, male, NA, stage:2, alive, 810 days
8.7
DO23544
0 years, male, NA, stage:2, alive, 960 days
8.7
DO23515
0 years, male, NA, stage:2, alive, 1230 days
8.6
DO48759
0 years, male, NA, stage:3, alive, 720 days
8.5
DO50850
0 years, male, NA, stage:3, alive, 720 days
8.4
DO23530
0 years, male, NA, stage:4, dead, 180 days
8.2
DO45287
0 years, male, NA, stage:1, alive, 390 days
8.2
DO45167
0 years, male, NA, stage:2, dead, 1440 days
7.9
DO45303
0 years, female, NA, stage:3, alive, 990 days
7.8
DO45155
0 years, male, NA, stage:2, alive, 2160 days
7.8
DO50855
0 years, male, NA, stage:2, alive, 570 days
7.6
DO45181
0 years, female, NA, stage:2, alive, 1200 days
7.4
DO45233
0 years, male, NA, stage:3, alive, 900 days
6.5
DO50805
0 years, male, NA, stage:2, alive, 690 days
6.2
DO45283
0 years, male, NA, stage:3, alive, 510 days
6.2
DO45205
0 years, female, NA, stage:2, dead, 90 days
6.1
DO50808
0 years, male, NA, stage:2, alive, 570 days
5.9
DO45305
0 years, male, NA, stage:4, alive, 300 days
5.9
DO227801
0 years, female, NA, stage:1, alive, 660 days
5.5
DO48761
0 years, male, NA, stage:2, alive, 870 days
5.3
DO45249
0 years, male, NA, stage:1, alive, 630 days
5.1
DO45127
0 years, male, NA, stage:3, dead, 420 days
5.1
DO45307
0 years, female, NA, stage:4, dead, 240 days
5.0
DO45279
0 years, male, NA, stage:3, alive, 1290 days
5.0
DO45251
0 years, female, NA, stage:2, alive, 900 days
4.5
DO23551
0 years, male, NA, stage:3, dead, 150 days
4.2
DO45185
0 years, male, NA, stage:2, alive, 600 days
3.5
DO45297
0 years, female, NA, stage:4, dead, 1260 days
2.8
DO45289
0 years, female, NA, stage:3, alive, 360 days
2.6
DO45301
0 years, male, NA, stage:2, dead, 1440 days
2.5
DO45285
0 years, male, NA, stage:3, alive, 480 days
2.2
DO45245
0 years, female, NA, stage:2, dead, 240 days
2.0
DO45259
0 years, male, NA, stage:3, alive, 330 days
2.0
DO45189
0 years, female, NA, stage:2, alive, 1200 days
1.6
DO45211
0 years, male, NA, stage:3, alive, 240 days
1.2
DO45299
0 years, female, NA, stage:1, alive, 1440 days
1.0
Show allShow less
LIVER HEPATOCELLULAR CARCINOMA - Protein relative expression (CPTAC)
Number of samples
330
Samples
Sample ID
Sample type
nRPX
431
Tumor
1.7
425
Tumor
1.7
435
Tumor
1.3
665
Tumor
1.3
445
Tumor
1.3
1025
Tumor
1.3
715
Tumor
1.2
517
Tumor
1.2
957
Tumor
1.1
112
Tumor
1.0
1031
Tumor
0.9
131
Tumor
0.9
313
Tumor
0.8
427
Tumor
0.8
487
Tumor
0.8
1021
Tumor
0.7
387
Tumor
0.7
222
Normal
0.7
695
Tumor
0.6
975
Tumor
0.6
1027
Tumor
0.6
553
Tumor
0.6
877
Tumor
0.6
393
Tumor
0.6
191
Tumor
0.6
967
Tumor
0.6
258
Normal
0.6
647
Tumor
0.6
911
Tumor
0.5
192
Normal
0.5
423
Tumor
0.5
232
Normal
0.5
573
Tumor
0.5
272
Normal
0.5
217
Tumor
0.5
1041
Tumor
0.5
328
Normal
0.4
262
Normal
0.4
912
Normal
0.4
385
Tumor
0.4
267
Tumor
0.4
412
Normal
0.4
142
Normal
0.4
185
Tumor
0.4
426
Normal
0.4
713
Tumor
0.4
214
Normal
0.4
554
Normal
0.4
218
Normal
0.4
443
Tumor
0.4
364
Normal
0.4
914
Normal
0.3
268
Normal
0.3
213
Tumor
0.3
432
Normal
0.3
356
Normal
0.3
697
Tumor
0.3
863
Tumor
0.3
147
Tumor
0.3
963
Tumor
0.3
196
Normal
0.3
483
Tumor
0.3
1013
Tumor
0.3
965
Tumor
0.3
171
Tumor
0.2
722
Normal
0.2
161
Tumor
0.2
884
Normal
0.2
721
Tumor
0.2
883
Tumor
0.2
271
Tumor
0.2
882
Normal
0.2
515
Tumor
0.2
187
Tumor
0.2
686
Normal
0.2
564
Normal
0.2
873
Tumor
0.2
416
Normal
0.2
125
Tumor
0.2
127
Tumor
0.2
568
Normal
0.2
572
Normal
0.2
523
Tumor
0.2
491
Tumor
0.2
571
Tumor
0.1
534
Normal
0.1
977
Tumor
0.1
574
Normal
0.1
257
Tumor
0.1
867
Tumor
0.1
685
Tumor
0.1
422
Normal
0.1
525
Tumor
0.1
135
Tumor
0.1
818
Normal
0.1
446
Normal
0.1
484
Normal
0.1
332
Normal
0.1
146
Normal
0.1
221
Tumor
0.1
862
Normal
0.1
123
Tumor
0.1
415
Tumor
0.1
137
Tumor
0.1
513
Tumor
0.1
524
Normal
0.1
858
Normal
0.1
514
Normal
0.0
433
Tumor
0.0
666
Normal
0.0
696
Normal
0.0
516
Normal
0.0
1016
Normal
0.0
518
Normal
0.0
421
Tumor
0.0
1022
Normal
0.0
913
Tumor
0.0
714
Normal
0.0
563
Tumor
0.0
141
Tumor
0.0
546
Normal
0.0
186
Normal
0.0
1043
Tumor
0.0
231
Tumor
0.0
298
Normal
0.0
824
Normal
0.0
663
Tumor
0.0
1026
Normal
0.0
436
Normal
0.0
261
Tumor
0.0
414
Normal
0.0
1028
Normal
0.0
864
Normal
0.0
424
Normal
0.0
528
Normal
0.0
1032
Normal
0.0
538
Normal
0.0
648
Normal
0.0
816
Normal
0.0
672
Normal
-0.1
567
Tumor
-0.1
881
Tumor
-0.1
526
Normal
-0.1
297
Tumor
-0.1
111
Normal
-0.1
148
Normal
-0.1
132
Normal
-0.1
136
Normal
-0.1
1045
Tumor
-0.1
982
Normal
-0.1
1014
Normal
-0.1
195
Tumor
-0.1
331
Tumor
-0.1
428
Normal
-0.1
392
Normal
-0.1
664
Normal
-0.1
314
Normal
-0.1
984
Normal
-0.1
327
Tumor
-0.1
716
Normal
-0.1
1046
Normal
-0.1
413
Tumor
-0.1
557
Tumor
-0.1
926
Normal
-0.1
878
Normal
-0.1
363
Tumor
-0.1
868
Normal
-0.1
874
Normal
-0.2
851
Tumor
-0.2
434
Normal
-0.2
494
Normal
-0.2
444
Normal
-0.2
861
Tumor
-0.2
488
Normal
-0.2
277
Tumor
-0.2
662
Normal
-0.2
536
Normal
-0.2
1042
Normal
-0.2
493
Tumor
-0.2
128
Normal
-0.2
394
Normal
-0.2
823
Tumor
-0.2
925
Tumor
-0.2
448
Normal
-0.2
918
Normal
-0.2
312
Normal
-0.2
865
Tumor
-0.3
396
Normal
-0.3
558
Normal
-0.3
857
Tumor
-0.3
138
Normal
-0.3
278
Normal
-0.3
866
Normal
-0.3
535
Tumor
-0.3
537
Tumor
-0.3
698
Normal
-0.3
311
Tumor
-0.3
983
Tumor
-0.3
852
Normal
-0.3
162
Normal
-0.3
1044
Normal
-0.3
498
Normal
-0.3
981
Tumor
-0.3
968
Normal
-0.3
671
Tumor
-0.3
533
Tumor
-0.3
386
Normal
-0.4
388
Normal
-0.4
492
Normal
-0.4
411
Tumor
-0.4
966
Normal
-0.4
124
Normal
-0.4
447
Tumor
-0.4
922
Normal
-0.4
545
Tumor
-0.4
114
Normal
-0.4
172
Normal
-0.4
126
Normal
-0.4
815
Tumor
-0.5
527
Tumor
-0.5
188
Normal
-0.5
817
Tumor
-0.5
355
Tumor
-0.6
978
Normal
-0.6
976
Normal
-0.6
661
Tumor
-0.6
964
Normal
-0.6
391
Tumor
-0.6
145
Tumor
-0.6
958
Normal
-0.7
924
Normal
-0.7
113
Tumor
-0.7
915
Tumor
-0.7
921
Tumor
-0.8
1015
Tumor
-0.9
917
Tumor
-0.9
395
Tumor
-1.0
923
Tumor
-1.1
916
Normal
-1.1
497
Tumor
-1.3
471
Tumor
N/A
351
Tumor
N/A
472
Normal
N/A
352
Normal
N/A
473
Tumor
N/A
353
Tumor
N/A
474
Normal
N/A
354
Normal
N/A
477
Tumor
N/A
357
Tumor
N/A
478
Normal
N/A
358
Normal
N/A
481
Tumor
N/A
361
Tumor
N/A
482
Normal
N/A
362
Normal
N/A
365
Tumor
N/A
366
Normal
N/A
367
Tumor
N/A
368
Normal
N/A
375
Tumor
N/A
376
Normal
N/A
813
Tumor
N/A
814
Normal
N/A
937
Tumor
N/A
938
Normal
N/A
383
Tumor
N/A
384
Normal
N/A
943
Tumor
N/A
944
Normal
N/A
951
Tumor
N/A
952
Normal
N/A
953
Tumor
N/A
954
Normal
N/A
955
Tumor
N/A
956
Normal
N/A
283
Tumor
N/A
284
Normal
N/A
285
Tumor
N/A
286
Normal
N/A
723
Tumor
N/A
724
Normal
N/A
727
Tumor
N/A
728
Normal
N/A
615
Tumor
N/A
616
Normal
N/A
737
Tumor
N/A
617
Tumor
N/A
738
Normal
N/A
618
Normal
N/A
741
Tumor
N/A
742
Normal
N/A
743
Tumor
N/A
744
Normal
N/A
745
Tumor
N/A
746
Normal
N/A
627
Tumor
N/A
628
Normal
N/A
755
Tumor
N/A
635
Tumor
N/A
756
Normal
N/A
636
Normal
N/A
641
Tumor
N/A
642
Normal
N/A
777
Tumor
N/A
778
Normal
N/A
785
Tumor
N/A
786
Normal
N/A
451
Tumor
N/A
452
Normal
N/A
211
Tumor
N/A
212
Normal
N/A
455
Tumor
N/A
456
Normal
N/A
461
Tumor
N/A
341
Tumor
N/A
462
Normal
N/A
342
Normal
N/A
463
Tumor
N/A
343
Tumor
N/A
464
Normal
N/A
223
Tumor
N/A
344
Normal
N/A
465
Tumor
N/A
224
Normal
N/A
466
Normal
N/A
467
Tumor
N/A
468
Normal
N/A
227
Tumor
N/A
228
Normal
N/A
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LIVER CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.