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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
ZBTB7B is not prognostic in Liver Hepatocellular Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
22.6
Number of samples
362
Samples
Sample
Description
TPM
TCGA-BC-A112-01A
0 years, male, white, stage:'--, dead, 153 days
100.3
TCGA-DD-AACH-01A
0 years, male, asian, stage:Stage II, dead, 195 days
99.7
TCGA-CC-A3MC-01A
0 years, male, asian, stage:Stage IIIA, alive, 363 days
81.6
TCGA-UB-A7MC-01A
0 years, male, white, stage:Stage IIIA, alive, 500 days
76.9
TCGA-BC-A10R-01A
0 years, female, white, stage:'--, dead, 308 days
75.2
TCGA-CC-5263-01A
0 years, male, asian, stage:Stage IIIA, dead, 129 days
73.6
TCGA-ZP-A9CV-01A
0 years, male, white, stage:'--, dead, 1088 days
73.3
TCGA-BC-A3KG-01A
0 years, female, white, stage:Stage II, alive, 680 days
66.6
TCGA-LG-A9QC-01A
0 years, male, white, stage:Stage I, alive, 425 days
65.0
TCGA-DD-AAVV-01A
0 years, male, asian, stage:Stage II, alive, 2455 days
63.3
TCGA-G3-AAV7-01A
0 years, male, asian, stage:Stage II, alive, 361 days
62.8
TCGA-CC-A7IK-01A
0 years, male, asian, stage:Stage IIIA, dead, 262 days
60.5
TCGA-DD-AAEG-01A
0 years, female, asian, stage:Stage I, alive, 719 days
60.4
TCGA-BC-A216-01A
0 years, female, white, stage:Stage IIIA, alive, 1351 days
58.4
TCGA-FV-A2QR-01A
0 years, male, white, stage:Stage I, dead, 581 days
57.9
TCGA-DD-A1EE-01A
0 years, male, white, stage:Stage IIIA, dead, 349 days
57.8
TCGA-UB-A7MD-01A
0 years, male, black or african american, stage:Stage I, dead, 52 days
56.4
TCGA-DD-A73E-01A
0 years, male, white, stage:Stage I, alive, 44 days
56.3
TCGA-UB-A7MB-01A
0 years, male, white, stage:Stage II, alive, 601 days
55.7
TCGA-BC-A10W-01A
0 years, male, asian, stage:'--, dead, 91 days
53.0
TCGA-DD-AAVP-01A
0 years, male, asian, stage:Stage I, alive, 2752 days
52.1
TCGA-DD-A1EA-01A
0 years, male, asian, stage:Stage II, alive, 2415 days
51.9
TCGA-CC-5261-01A
0 years, male, asian, stage:Stage II, dead, 97 days
50.5
TCGA-ZP-A9D0-01A
0 years, female, black or african american, stage:'--, alive, 1091 days
49.0
TCGA-DD-AACS-01A
0 years, male, asian, stage:Stage I, alive, 1804 days
48.2
TCGA-CC-A5UD-01A
0 years, male, asian, stage:Stage IIIA, dead, 304 days
47.9
TCGA-DD-A39W-01A
0 years, female, white, stage:Stage III, dead, 827 days
47.1
TCGA-ED-A7XP-01A
0 years, female, asian, stage:Stage II, alive, 400 days
46.6
TCGA-RC-A7SH-01A
0 years, male, asian, stage:Stage II, alive, 468 days
46.0
TCGA-CC-A3MB-01A
0 years, male, asian, stage:Stage IIIA, dead, 315 days
43.7
TCGA-EP-A12J-01A
0 years, male, black or african american, stage:Stage I, alive, 570 days
42.9
TCGA-CC-A8HV-01A
0 years, female, asian, stage:Stage II, dead, 279 days
42.6
TCGA-CC-A7IH-01A
0 years, male, asian, stage:Stage IIIA, alive, 365 days
42.4
TCGA-DD-AADY-01A
0 years, female, asian, stage:Stage I, alive, 555 days
42.0
TCGA-WX-AA44-01A
0 years, female, white, stage:Stage I, alive, 615 days
41.8
TCGA-WJ-A86L-01A
0 years, female, white, stage:Stage I, alive, 345 days
41.6
TCGA-DD-A113-01A
0 years, female, white, stage:Stage II, alive, 2425 days
41.6
TCGA-CC-A3MA-01A
0 years, male, asian, stage:Stage IIIA, dead, 303 days
41.2
TCGA-ZP-A9D4-01A
0 years, female, white, stage:'--, alive, 395 days
40.3
TCGA-BC-A8YO-01A
0 years, female, white, stage:Stage IIIC, alive, 562 days
40.3
TCGA-BC-A10U-01A
0 years, male, white, stage:'--, dead, 837 days
40.0
TCGA-DD-AAD1-01A
0 years, female, asian, stage:Stage I, alive, 564 days
39.8
TCGA-QA-A7B7-01A
0 years, male, black or african american, stage:Stage II, alive, 94 days
38.7
TCGA-DD-AACQ-01A
0 years, male, asian, stage:Stage II, dead, 432 days
38.7
TCGA-YA-A8S7-01A
0 years, male, white, stage:Stage IIIA, dead, 412 days
38.7
TCGA-DD-A3A9-01A
0 years, female, white, stage:Stage IVB, dead, 931 days
38.0
TCGA-ZP-A9D1-01A
0 years, female, white, stage:'--, alive, 21 days
37.7
TCGA-DD-A4NF-01A
0 years, male, white, stage:Stage I, alive, 942 days
37.5
TCGA-DD-AADW-01A
0 years, male, asian, stage:Stage I, alive, 587 days
37.4
TCGA-CC-5264-01A
0 years, male, asian, stage:Stage IIIA, dead, 102 days
36.1
TCGA-XR-A8TE-01A
0 years, male, white, stage:Stage IIIA, alive, 925 days
36.1
TCGA-2Y-A9HA-01A
0 years, male, white, stage:Stage II, dead, 36 days
35.9
TCGA-DD-AAVZ-01A
0 years, male, asian, stage:Stage I, alive, 1900 days
35.7
TCGA-DD-A4NH-01A
0 years, female, white, stage:Stage IIIB, alive, 917 days
34.5
TCGA-ED-A4XI-01A
0 years, male, asian, stage:Stage II, alive, 819 days
34.3
TCGA-DD-A3A8-01A
0 years, male, white, stage:Stage II, dead, 11 days
34.2
TCGA-2Y-A9HB-01A
0 years, male, stage:Stage I, alive, 260 days
34.2
TCGA-DD-AAW0-01A
0 years, male, asian, stage:Stage I, alive, 2015 days
34.2
TCGA-DD-AAD0-01A
0 years, female, asian, stage:Stage I, alive, 137 days
33.3
TCGA-EP-A26S-01A
0 years, male, white, stage:Stage I, alive, 608 days
33.3
TCGA-DD-A1EH-01A
0 years, male, white, stage:Stage III, alive, 1495 days
33.2
TCGA-HP-A5N0-01A
0 years, female, stage:'--, dead, 752 days
33.1
TCGA-DD-A115-01A
0 years, male, white, stage:Stage IIIA, dead, 2542 days
32.9
TCGA-G3-A7M6-01A
0 years, female, white, stage:Stage I, alive, 632 days
32.9
TCGA-G3-A3CG-01A
0 years, male, white, stage:Stage I, alive, 673 days
32.6
TCGA-EP-A2KA-01A
0 years, female, white, stage:Stage IIIA, dead, 627 days
32.4
TCGA-KR-A7K8-01A
0 years, male, stage:Stage I, alive, 906 days
32.3
TCGA-DD-A114-01A
0 years, male, black or african american, stage:Stage II, dead, 1149 days
32.2
TCGA-G3-A25Y-01A
0 years, female, asian, stage:Stage I, dead, 452 days
32.0
TCGA-DD-AAE6-01A
0 years, female, asian, stage:Stage I, alive, 141 days
31.8
TCGA-KR-A7K0-01A
0 years, male, white, stage:Stage I, dead, 65 days
31.5
TCGA-DD-A4NK-01A
0 years, female, white, stage:Stage IIIA, dead, 1210 days
31.1
TCGA-FV-A3I1-01A
0 years, female, white, stage:Stage II, dead, 247 days
30.8
TCGA-2Y-A9H6-01A
0 years, female, white, stage:Stage I, alive, 357 days
30.7
TCGA-4R-AA8I-01A
0 years, male, white, stage:Stage II, dead, 262 days
30.7
TCGA-DD-AAVQ-01A
0 years, male, asian, stage:Stage I, alive, 2728 days
30.1
TCGA-DD-A73C-01A
0 years, female, white, stage:Stage IIIA, alive, 701 days
29.6
TCGA-DD-AAD3-01A
0 years, male, asian, stage:Stage I, alive, 1295 days
29.4
TCGA-5C-A9VG-01A
0 years, male, white, stage:Stage II, alive, 328 days
29.4
TCGA-DD-A11D-01A
0 years, female, white, stage:Stage I, dead, 1560 days
28.9
TCGA-DD-AAC8-01A
0 years, male, asian, stage:Stage I, dead, 16 days
28.9
TCGA-DD-AACN-01A
0 years, male, asian, stage:Stage I, alive, 1302 days
28.7
TCGA-2Y-A9GZ-01A
0 years, female, white, stage:Stage II, dead, 848 days
28.0
TCGA-G3-AAV3-01A
0 years, female, white, stage:Stage II, alive, 412 days
27.5
TCGA-DD-AADC-01A
0 years, male, asian, stage:Stage I, dead, 425 days
27.5
TCGA-MI-A75C-01A
0 years, male, white, stage:Stage I, alive, 291 days
27.5
TCGA-DD-A1EG-01A
0 years, male, white, stage:Stage I, dead, 1372 days
27.5
TCGA-2Y-A9GU-01A
0 years, female, white, stage:Stage I, alive, 1939 days
26.9
TCGA-2Y-A9GS-01A
0 years, male, white, stage:'--, dead, 724 days
26.7
TCGA-ED-A66X-01A
0 years, male, asian, stage:Stage IIIA, alive, 406 days
26.7
TCGA-G3-AAV2-01A
0 years, male, white, stage:Stage I, alive, 372 days
26.7
TCGA-DD-AACT-01A
0 years, female, asian, stage:Stage I, alive, 1562 days
26.5
TCGA-UB-A7MA-01A
0 years, female, white, stage:Stage II, alive, 848 days
26.5
TCGA-DD-AAVS-01A
0 years, male, asian, stage:Stage I, alive, 1823 days
26.4
TCGA-DD-AADD-01A
0 years, male, asian, stage:Stage I, alive, 1231 days
26.3
TCGA-5C-AAPD-01A
0 years, male, asian, stage:Stage II, alive, 20 days
26.3
TCGA-DD-AACU-01A
0 years, male, asian, stage:Stage I, alive, 1567 days
26.2
TCGA-DD-AAW1-01A
0 years, male, asian, stage:Stage IIIA, alive, 1989 days
26.2
TCGA-2Y-A9H5-01A
0 years, female, white, stage:Stage I, dead, 555 days
26.1
TCGA-CC-A5UE-01A
0 years, male, asian, stage:Stage IIIB, dead, 272 days
26.1
TCGA-DD-A4NV-01A
0 years, male, white, stage:Stage IIIA, alive, 2398 days
25.8
TCGA-GJ-A6C0-01A
0 years, female, white, stage:Stage II, dead, 31 days
25.7
TCGA-XR-A8TD-01A
0 years, female, white, stage:Stage IIIB, alive, 1030 days
25.6
TCGA-ED-A7PX-01A
0 years, female, asian, stage:Stage II, alive, 6 days
25.6
TCGA-DD-AAVY-01A
0 years, male, asian, stage:Stage IIIA, alive, 1970 days
25.6
TCGA-BC-A10Z-01A
0 years, female, white, stage:Stage I, dead, 34 days
25.5
TCGA-KR-A7K2-01A
0 years, male, white, stage:Stage I, alive, 829 days
25.5
TCGA-ZP-A9D2-01A
0 years, male, white, stage:'--, dead, 765 days
25.4
TCGA-G3-A5SI-01A
0 years, male, asian, stage:Stage II, dead, 768 days
25.2
TCGA-G3-AAV5-01A
0 years, male, white, stage:Stage II, alive, 354 days
25.2
TCGA-CC-A7IL-01A
0 years, male, asian, stage:Stage IIIA, dead, 278 days
25.2
TCGA-5R-AA1C-01A
0 years, male, white, stage:Stage II, alive, 520 days
25.1
TCGA-CC-A8HS-01A
0 years, male, asian, stage:Stage IIIC, dead, 300 days
25.1
TCGA-ED-A97K-01A
0 years, male, asian, stage:Stage IIIA, alive, 6 days
25.1
TCGA-G3-A6UC-01A
0 years, male, white, stage:Stage IIIB, alive, 671 days
25.1
TCGA-EP-A2KC-01A
0 years, male, black or african american, stage:Stage I, dead, 19 days
24.9
TCGA-DD-A118-01A
0 years, female, white, stage:Stage II, alive, 3437 days
24.7
TCGA-DD-AACF-01A
0 years, male, asian, stage:Stage I, dead, 365 days
24.6
TCGA-DD-A4NA-01A
0 years, female, white, stage:Stage IIIC, alive, 1008 days
24.5
TCGA-DD-AAD5-01A
0 years, male, asian, stage:Stage I, alive, 1345 days
24.4
TCGA-ED-A7PZ-01A
0 years, male, asian, stage:Stage II, alive, 6 days
24.4
TCGA-DD-AACX-01A
0 years, male, asian, stage:Stage II, alive, 170 days
24.2
TCGA-DD-AAVR-01A
0 years, male, asian, stage:Stage I, alive, 2513 days
24.1
TCGA-ZP-A9CZ-01A
0 years, male, asian, stage:'--, alive, 706 days
24.0
TCGA-XR-A8TG-01A
0 years, male, white, stage:Stage I, alive, 898 days
24.0
TCGA-DD-A1EK-01A
0 years, female, white, stage:Stage IVB, dead, 558 days
23.9
TCGA-2Y-A9GW-01A
0 years, male, white, stage:Stage I, dead, 1271 days
23.9
TCGA-BC-A217-01A
0 years, female, white, stage:Stage II, dead, 1397 days
23.8
TCGA-XR-A8TC-01A
0 years, female, white, stage:Stage I, alive, 1339 days
23.8
TCGA-LG-A6GG-01A
0 years, female, white, stage:Stage II, alive, 387 days
23.8
TCGA-DD-AAED-01A
0 years, male, asian, stage:Stage I, alive, 763 days
23.7
TCGA-DD-A4NJ-01A
0 years, female, white, stage:Stage II, alive, 928 days
23.5
TCGA-DD-AACY-01A
0 years, male, asian, stage:Stage I, alive, 1450 days
23.4
TCGA-DD-AA3A-01A
0 years, female, white, stage:Stage I, dead, 410 days
23.0
TCGA-DD-A4NN-01A
0 years, female, white, stage:Stage I, dead, 899 days
22.9
TCGA-RC-A6M4-01A
0 years, female, white, stage:Stage IIIA, alive, 22 days
22.9
TCGA-UB-A7MF-01A
0 years, male, white, stage:Stage IIIA, dead, 214 days
22.9
TCGA-ZS-A9CG-01A
0 years, male, white, stage:Stage II, alive, 341 days
22.8
TCGA-2Y-A9H2-01A
0 years, female, white, stage:Stage I, alive, 1731 days
22.7
TCGA-G3-A3CH-01A
0 years, male, asian, stage:Stage IIIA, alive, 780 days
22.7
TCGA-DD-A1EL-01A
0 years, male, black or african american, stage:Stage II, dead, 415 days
22.7
TCGA-ED-A66Y-01A
0 years, female, asian, stage:Stage IIIA, dead, 296 days
22.5
TCGA-O8-A75V-01A
0 years, male, stage:Stage I, alive, 538 days
22.5
TCGA-DD-AADA-01A
0 years, female, asian, stage:Stage I, alive, 1233 days
22.4
TCGA-CC-5262-01A
0 years, male, asian, stage:Stage IIIC, dead, 103 days
22.3
TCGA-DD-AAW3-01A
0 years, male, asian, stage:Stage I, alive, 1633 days
22.3
TCGA-UB-A7ME-01A
0 years, male, asian, stage:Stage I, alive, 486 days
22.2
TCGA-2Y-A9GX-01A
0 years, male, white, stage:Stage I, alive, 2442 days
22.2
TCGA-G3-AAV4-01A
0 years, female, white, stage:Stage I, dead, 27 days
22.2
TCGA-ED-A5KG-01A
0 years, female, asian, stage:Stage II, alive, 854 days
21.9
TCGA-DD-A4NR-01A
0 years, female, white, stage:Stage I, dead, 9 days
21.8
TCGA-2Y-A9H8-01A
0 years, female, white, stage:'--, dead, 633 days
21.7
TCGA-DD-A1EB-01A
0 years, female, stage:Stage I, alive, 2017 days
21.7
TCGA-ZS-A9CE-01A
0 years, female, white, stage:Stage II, alive, 1241 days
21.4
TCGA-CC-A1HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 101 days
21.4
TCGA-WQ-A9G7-01A
0 years, female, white, stage:'--, alive, 30 days
21.4
TCGA-DD-AAE1-01A
0 years, male, asian, stage:Stage I, alive, 552 days
21.2
TCGA-DD-AAEK-01A
0 years, male, asian, stage:Stage II, alive, 1067 days
21.1
TCGA-DD-AADG-01A
0 years, male, asian, stage:Stage IIIA, alive, 1145 days
21.0
TCGA-DD-AAVW-01A
0 years, male, asian, stage:Stage I, alive, 2317 days
21.0
TCGA-ED-A7PY-01A
0 years, female, asian, stage:Stage II, alive, 390 days
20.9
TCGA-DD-A39X-01A
0 years, female, white, stage:Stage I, dead, 1694 days
20.8
TCGA-DD-AAE9-01A
0 years, male, asian, stage:Stage I, alive, 722 days
20.6
TCGA-RC-A7SK-01A
0 years, male, asian, stage:Stage I, alive, 472 days
20.5
TCGA-FV-A2QQ-01A
0 years, male, white, stage:Stage I, alive, 729 days
20.4
TCGA-DD-AACE-01A
0 years, male, asian, stage:Stage I, alive, 2184 days
20.4
TCGA-K7-AAU7-01A
0 years, male, white, stage:Stage II, alive, 359 days
20.4
TCGA-G3-A25U-01A
0 years, female, asian, stage:Stage I, alive, 1636 days
20.4
TCGA-HP-A5MZ-01A
0 years, male, stage:Stage I, dead, 91 days
20.4
TCGA-CC-5260-01A
0 years, female, asian, stage:Stage IIIC, dead, 87 days
20.3
TCGA-DD-AADV-01A
0 years, male, asian, stage:Stage I, alive, 574 days
20.3
TCGA-5C-A9VH-01A
0 years, male, white, stage:Stage I, alive, 322 days
20.2
TCGA-ZS-A9CD-01A
0 years, male, white, stage:Stage II, dead, 1386 days
20.2
TCGA-DD-A4NE-01A
0 years, female, white, stage:Stage IIIA, dead, 660 days
19.9
TCGA-CC-A8HU-01A
0 years, female, asian, stage:Stage IIIA, dead, 344 days
19.8
TCGA-DD-AAD8-01A
0 years, female, asian, stage:Stage I, alive, 1219 days
19.8
TCGA-UB-AA0U-01A
0 years, male, white, stage:Stage II, alive, 327 days
19.7
TCGA-DD-A4NQ-01A
0 years, male, white, stage:Stage II, dead, 373 days
19.7
TCGA-DD-AACJ-01A
0 years, male, asian, stage:Stage II, alive, 2102 days
19.6
TCGA-DD-AAEE-01A
0 years, male, asian, stage:Stage I, alive, 810 days
19.6
TCGA-G3-A5SM-01A
0 years, male, white, stage:Stage II, alive, 520 days
19.5
TCGA-MI-A75G-01A
0 years, male, white, stage:Stage II, alive, 698 days
19.5
TCGA-DD-A4NS-01A
0 years, female, white, stage:Stage I, dead, 2456 days
19.4
TCGA-CC-A7IG-01A
0 years, male, asian, stage:Stage II, dead, 299 days
19.3
TCGA-DD-A1EC-01A
0 years, female, white, stage:Stage I, alive, 602 days
19.3
TCGA-EP-A3JL-01A
0 years, male, white, stage:Stage I, alive, 303 days
19.2
TCGA-K7-A6G5-01A
0 years, male, white, stage:Stage I, alive, 512 days
19.0
TCGA-FV-A3R2-01A
0 years, male, white, stage:Stage I, dead, 194 days
19.0
TCGA-DD-AAW2-01A
0 years, male, asian, stage:Stage I, alive, 1855 days
18.9
TCGA-G3-A25S-01A
0 years, male, white, stage:Stage I, dead, 416 days
18.8
TCGA-DD-A4NO-01A
0 years, male, white, stage:Stage I, alive, 2245 days
18.8
TCGA-G3-A7M9-01A
0 years, male, white, stage:Stage IIIB, dead, 56 days
18.8
TCGA-ED-A8O5-01A
0 years, female, asian, stage:Stage IIIA, alive, 406 days
18.6
TCGA-ES-A2HT-01A
0 years, male, black or african american, stage:Stage I, dead, 438 days
18.4
TCGA-2Y-A9H9-01A
0 years, male, white, stage:Stage I, alive, 697 days
18.3
TCGA-G3-A5SL-01A
0 years, male, white, stage:Stage II, alive, 621 days
18.3
TCGA-FV-A23B-01A
0 years, female, white, stage:Stage II, dead, 1852 days
18.2
TCGA-FV-A496-01A
0 years, female, white, stage:Stage I, alive, 10 days
17.9
TCGA-MI-A75I-01A
0 years, male, black or african american, stage:'--, alive, 630 days
17.9
TCGA-DD-AAE2-01A
0 years, male, asian, stage:Stage I, alive, 638 days
17.9
TCGA-G3-AAV1-01A
0 years, male, asian, stage:Stage IIIC, dead, 359 days
17.8
TCGA-GJ-A9DB-01A
0 years, male, white, stage:Stage I, dead, 67 days
17.7
TCGA-G3-A7M8-01A
0 years, male, asian, stage:Stage I, alive, 430 days
17.6
TCGA-BD-A3ER-01A
0 years, male, white, stage:Stage II, alive, 1115 days
17.6
TCGA-ED-A459-01A
0 years, male, asian, stage:Stage II, alive, 910 days
17.3
TCGA-2Y-A9GT-01A
0 years, male, white, stage:Stage I, dead, 1624 days
17.3
TCGA-RC-A7S9-01A
0 years, female, asian, stage:Stage I, alive, 640 days
17.2
TCGA-G3-A5SK-01A
0 years, male, white, stage:Stage I, alive, 744 days
17.1
TCGA-NI-A8LF-01A
0 years, male, white, stage:Stage I, alive, 799 days
17.0
TCGA-MI-A75E-01A
0 years, male, white, stage:Stage IIIC, alive, 507 days
17.0
TCGA-DD-A73F-01A
0 years, female, white, stage:Stage I, alive, 1085 days
16.9
TCGA-EP-A3RK-01A
0 years, male, white, stage:Stage IIIA, alive, 363 days
16.9
TCGA-DD-A73A-01A
0 years, male, white, stage:Stage I, alive, 728 days
16.8
TCGA-ED-A7XO-01A
0 years, male, asian, stage:Stage IIIA, alive, 427 days
16.8
TCGA-DD-AAE7-01A
0 years, male, asian, stage:Stage I, alive, 644 days
16.7
TCGA-BC-A10Y-01A
0 years, male, white, stage:'--, dead, 711 days
16.6
TCGA-3K-AAZ8-01A
0 years, male, black or african american, stage:Stage IIIB, alive, 396 days
16.6
TCGA-2Y-A9H0-01A
0 years, male, white, stage:Stage IIIA, alive, 3675 days
16.5
TCGA-DD-AADL-01A
0 years, male, asian, stage:Stage I, alive, 636 days
16.5
TCGA-DD-AAEH-01A
0 years, male, asian, stage:Stage I, alive, 784 days
16.4
TCGA-BD-A2L6-01A
0 years, male, white, stage:'--, alive, 1363 days
16.3
TCGA-DD-AAD2-01A
0 years, male, asian, stage:Stage I, alive, 658 days
16.2
TCGA-DD-AADI-01A
0 years, female, asian, stage:Stage I, alive, 1085 days
16.2
TCGA-DD-A39Y-01A
0 years, male, asian, stage:Stage I, dead, 171 days
16.1
TCGA-DD-A4ND-01A
0 years, female, white, stage:Stage I, alive, 2746 days
16.1
TCGA-BC-A10T-01A
0 years, male, white, stage:'--, dead, 837 days
16.0
TCGA-G3-A25X-01A
0 years, male, asian, stage:Stage II, alive, 1779 days
15.8
TCGA-DD-AADK-01A
0 years, female, asian, stage:Stage II, alive, 1049 days
15.6
TCGA-DD-A116-01A
0 years, male, asian, stage:Stage IIIA, dead, 1622 days
15.5
TCGA-CC-5258-01A
0 years, male, asian, stage:Stage II, dead, 129 days
15.5
TCGA-DD-AACB-01A
0 years, female, asian, stage:Stage I, alive, 2324 days
15.4
TCGA-FV-A3R3-01A
0 years, female, white, stage:Stage I, dead, 366 days
15.4
TCGA-DD-A3A4-01A
0 years, male, white, stage:Stage IIIA, dead, 612 days
15.4
TCGA-BD-A3EP-01A
0 years, female, black or african american, stage:Stage I, alive, 409 days
15.3
TCGA-DD-AADU-01A
0 years, male, asian, stage:Stage II, alive, 554 days
15.2
TCGA-BC-A10Q-01A
0 years, female, white, stage:'--, dead, 1135 days
15.2
TCGA-CC-A9FW-01A
0 years, male, asian, stage:Stage IIIA, alive, 248 days
15.2
TCGA-RC-A6M6-01A
0 years, male, white, stage:Stage II, alive, 9 days
14.9
TCGA-T1-A6J8-01A
0 years, male, white, stage:'--, alive, 23 days
14.9
TCGA-DD-AADP-01A
0 years, male, asian, stage:Stage I, alive, 458 days
14.8
TCGA-CC-A8HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 140 days
14.6
TCGA-GJ-A3OU-01A
0 years, male, white, stage:Stage I, alive, 879 days
14.4
TCGA-DD-AACK-01A
0 years, male, asian, stage:Stage I, alive, 9 days
14.3
TCGA-G3-AAV0-01A
0 years, male, asian, stage:Stage I, alive, 476 days
14.3
TCGA-BC-A10S-01A
0 years, male, white, stage:'--, dead, 1423 days
14.3
TCGA-G3-A3CK-01A
0 years, male, asian, stage:Stage I, alive, 585 days
14.3
TCGA-ED-A82E-01A
0 years, female, asian, stage:Stage IIIA, alive, 408 days
14.2
TCGA-K7-A5RF-01A
0 years, male, white, stage:Stage I, alive, 631 days
14.2
TCGA-DD-A1EJ-01A
0 years, female, white, stage:Stage IIIC, dead, 1005 days
14.2
TCGA-DD-A1EF-01A
0 years, female, white, stage:Stage I, dead, 394 days
14.2
TCGA-RC-A6M5-01A
0 years, female, white, stage:Stage IVA, alive, 15 days
14.1
TCGA-DD-A11C-01A
0 years, male, white, stage:Stage I, alive, 662 days
14.1
TCGA-DD-A4NI-01A
0 years, male, white, stage:Stage II, alive, 816 days
14.0
TCGA-CC-A7IF-01A
0 years, male, asian, stage:Stage IIIA, dead, 649 days
14.0
TCGA-DD-AADF-01A
0 years, female, asian, stage:Stage I, dead, 115 days
13.9
TCGA-2Y-A9GV-01A
0 years, female, white, stage:Stage I, dead, 2532 days
13.9
TCGA-DD-AACW-01A
0 years, male, asian, stage:Stage I, alive, 1424 days
13.9
TCGA-DD-A1EI-01A
0 years, male, asian, stage:Stage I, alive, 183 days
13.9
TCGA-2Y-A9H7-01A
0 years, female, white, stage:Stage I, alive, 1168 days
13.8
TCGA-DD-A4NB-01A
0 years, male, white, stage:Stage I, alive, 989 days
13.8
TCGA-DD-A73D-01A
0 years, female, white, stage:Stage II, alive, 693 days
13.7
TCGA-G3-A5SJ-01A
0 years, male, white, stage:Stage I, alive, 698 days
13.3
TCGA-ED-A8O6-01A
0 years, female, asian, stage:Stage IIIA, dead, 56 days
13.2
TCGA-DD-A3A7-01A
0 years, male, stage:Stage IIIB, dead, 419 days
13.1
TCGA-DD-A3A1-01A
0 years, male, stage:Stage IIIA, dead, 233 days
13.1
TCGA-DD-AACZ-01A
0 years, female, asian, stage:Stage I, dead, 171 days
13.1
TCGA-ZP-A9CY-01A
0 years, female, white, stage:'--, alive, 782 days
13.1
TCGA-BC-A5W4-01A
0 years, male, white, stage:Stage IIIA, dead, 547 days
13.0
TCGA-ZS-A9CF-01A
0 years, male, white, stage:Stage II, alive, 2412 days
13.0
TCGA-BW-A5NO-01A
0 years, male, black or african american, stage:Stage IIIA, alive, 20 days
13.0
TCGA-DD-A73B-01A
0 years, female, white, stage:Stage I, dead, 283 days
13.0
TCGA-FV-A3I0-01A
0 years, female, white, stage:Stage II, alive, 848 days
12.9
TCGA-DD-A39Z-01A
0 years, female, stage:Stage II, dead, 601 days
12.7
TCGA-G3-A7M7-01A
0 years, male, white, stage:Stage I, alive, 361 days
12.7
TCGA-ED-A627-01A
0 years, male, white, stage:Stage I, alive, 423 days
12.7
TCGA-DD-AADB-01A
0 years, male, asian, stage:Stage I, alive, 1242 days
12.6
TCGA-DD-A3A2-01A
0 years, female, white, stage:Stage I, dead, 2131 days
12.6
TCGA-DD-AAC9-01A
0 years, male, asian, stage:Stage I, alive, 347 days
12.5
TCGA-PD-A5DF-01A
0 years, female, white, stage:Stage IIIB, dead, 639 days
12.4
TCGA-DD-AADJ-01A
0 years, female, asian, stage:Stage I, alive, 1066 days
12.2
TCGA-G3-A25V-01A
0 years, male, white, stage:Stage I, alive, 860 days
12.1
TCGA-DD-AACV-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
12.1
TCGA-DD-A3A3-01A
0 years, male, asian, stage:Stage I, dead, 535 days
11.9
TCGA-DD-A1ED-01A
0 years, male, white, stage:Stage I, alive, 2301 days
11.8
TCGA-DD-AACI-01A
0 years, male, asian, stage:Stage II, alive, 1618 days
11.7
TCGA-DD-AADM-01A
0 years, male, asian, stage:Stage II, dead, 12 days
11.4
TCGA-MI-A75H-01A
0 years, male, white, stage:'--, alive, 747 days
11.3
TCGA-G3-A25T-01A
0 years, female, white, stage:Stage IIIA, alive, 1553 days
11.2
TCGA-DD-A3A5-01A
0 years, female, white, stage:Stage III, dead, 3125 days
11.2
TCGA-DD-AACP-01A
0 years, male, asian, stage:Stage I, alive, 415 days
11.1
TCGA-FV-A495-01A
0 years, female, white, stage:Stage II, alive, 1 days
11.1
TCGA-KR-A7K7-01A
0 years, female, white, stage:Stage II, alive, 951 days
11.1
TCGA-K7-A5RG-01A
0 years, male, black or african american, stage:Stage I, alive, 519 days
11.0
TCGA-EP-A2KB-01A
0 years, female, white, stage:Stage I, dead, 596 days
11.0
TCGA-DD-A4NG-01A
0 years, male, white, stage:Stage IIIA, dead, 802 days
11.0
TCGA-DD-A11B-01A
0 years, male, white, stage:Stage I, dead, 14 days
11.0
TCGA-DD-AAEA-01A
0 years, male, asian, stage:Stage I, alive, 575 days
10.9
TCGA-G3-A25Z-01A
0 years, male, asian, stage:Stage I, alive, 655 days
10.8
TCGA-UB-AA0V-01A
0 years, female, white, stage:Stage I, alive, 314 days
10.7
TCGA-5R-AAAM-01A
0 years, female, white, stage:Stage II, dead, 46 days
10.7
TCGA-CC-A7IJ-01A
0 years, male, asian, stage:Stage II, alive, 382 days
10.7
TCGA-WX-AA47-01A
0 years, female, white, stage:Stage IIIA, dead, 556 days
10.7
TCGA-DD-AAEI-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
10.3
TCGA-DD-A119-01A
0 years, male, asian, stage:Stage IV, dead, 223 days
10.3
TCGA-RG-A7D4-01A
0 years, male, black or african american, stage:Stage II, alive, 1098 days
10.0
TCGA-RC-A7SB-01A
0 years, male, asian, stage:Stage II, alive, 588 days
10.0
TCGA-DD-AACA-01A
0 years, male, asian, stage:Stage I, alive, 2301 days
9.9
TCGA-2Y-A9H4-01A
0 years, male, black or african american, stage:Stage I, alive, 1452 days
9.8
TCGA-DD-AAE0-01A
0 years, female, asian, stage:Stage IIIA, alive, 555 days
9.8
TCGA-G3-AAUZ-01A
0 years, male, stage:Stage I, alive, 480 days
9.8
TCGA-RC-A7SF-01A
0 years, male, asian, stage:Stage I, alive, 579 days
9.3
TCGA-XR-A8TF-01A
0 years, male, white, stage:Stage I, dead, 693 days
9.3
TCGA-G3-A7M5-01A
0 years, male, asian, stage:Stage I, alive, 447 days
9.2
TCGA-2Y-A9GY-01A
0 years, female, white, stage:Stage II, dead, 757 days
9.1
TCGA-FV-A4ZQ-01A
0 years, male, white, stage:Stage I, alive, 12 days
9.0
TCGA-DD-A73G-01A
0 years, female, white, stage:Stage I, alive, 3478 days
8.4
TCGA-BC-A3KF-01A
0 years, female, white, stage:Stage I, alive, 8 days
8.3
TCGA-CC-A3M9-01A
0 years, male, asian, stage:Stage IIIA, dead, 300 days
8.3
TCGA-DD-AACL-01A
0 years, female, asian, stage:Stage I, dead, 107 days
8.2
TCGA-DD-A4NL-01A
0 years, male, white, stage:Stage I, alive, 1711 days
8.2
TCGA-LG-A9QD-01A
0 years, male, white, stage:Stage IIIA, alive, 366 days
8.1
TCGA-BC-A10X-01A
0 years, female, white, stage:Stage IIIA, dead, 770 days
8.1
TCGA-2Y-A9H3-01A
0 years, male, white, stage:Stage II, alive, 1516 days
8.1
TCGA-BC-A69I-01A
0 years, male, white, stage:Stage I, alive, 387 days
8.0
TCGA-MR-A8JO-01A
0 years, male, white, stage:Stage I, alive, 330 days
8.0
TCGA-CC-A9FS-01A
0 years, male, asian, stage:Stage II, alive, 211 days
7.7
TCGA-MR-A520-01A
0 years, male, white, stage:Stage I, alive, 229 days
7.2
TCGA-NI-A4U2-01A
0 years, male, white, stage:Stage IIIA, dead, 1791 days
7.2
TCGA-DD-AACC-01A
0 years, male, asian, stage:Stage I, dead, 1685 days
7.1
TCGA-BC-A69H-01A
0 years, male, white, stage:Stage II, alive, 444 days
7.0
TCGA-DD-A4NP-01A
0 years, male, white, stage:Stage I, alive, 3308 days
6.9
TCGA-DD-A39V-01A
0 years, male, white, stage:Stage II, dead, 643 days
6.9
TCGA-G3-A3CJ-01A
0 years, male, american indian or alaska native, stage:Stage II, alive, 594 days
6.6
TCGA-DD-AAD6-01A
0 years, male, asian, stage:Stage IIIA, alive, 672 days
6.6
TCGA-DD-A3A6-01A
0 years, female, white, stage:Stage II, dead, 3258 days
6.6
TCGA-DD-AAVX-01A
0 years, male, asian, stage:Stage II, alive, 1718 days
6.5
TCGA-WQ-AB4B-01A
0 years, male, white, stage:Stage II, alive, 395 days
6.5
TCGA-BC-A110-01A
0 years, female, black or african american, stage:'--, dead, 2116 days
6.5
TCGA-CC-A5UC-01A
0 years, male, asian, stage:Stage IIIA, dead, 347 days
6.4
TCGA-5R-AA1D-01A
0 years, female, white, stage:Stage IIIA, alive, 449 days
6.1
TCGA-DD-AADQ-01A
0 years, male, asian, stage:Stage II, alive, 436 days
6.0
TCGA-2Y-A9H1-01A
0 years, male, white, stage:Stage I, dead, 1229 days
5.9
TCGA-DD-AADR-01A
0 years, male, asian, stage:Stage I, alive, 2028 days
5.9
TCGA-G3-AAV6-01A
0 years, female, white, stage:Stage IIIA, dead, 65 days
5.8
TCGA-G3-A3CI-01A
0 years, male, white, stage:Stage I, alive, 180 days
5.8
TCGA-WX-AA46-01A
0 years, male, white, stage:Stage II, alive, 756 days
5.6
TCGA-FV-A4ZP-01A
0 years, male, white, stage:Stage IIIA, dead, 2486 days
5.4
TCGA-DD-AAE3-01A
0 years, male, asian, stage:Stage I, alive, 566 days
5.3
TCGA-CC-A7IE-01A
0 years, male, asian, stage:Stage IIIA, dead, 217 days
5.3
TCGA-DD-AAEB-01A
0 years, male, asian, stage:Stage I, alive, 478 days
5.2
TCGA-CC-5259-01A
0 years, female, asian, stage:Stage IIIC, alive, 250 days
4.9
TCGA-DD-AACG-01A
0 years, male, asian, stage:Stage II, dead, 469 days
4.7
TCGA-CC-A7II-01A
0 years, male, asian, stage:Stage IIIA, alive, 399 days
4.6
TCGA-DD-AAE4-01A
0 years, female, asian, stage:Stage I, alive, 608 days
4.4
TCGA-DD-AACO-01A
0 years, male, asian, stage:Stage I, alive, 1876 days
3.8
TCGA-DD-AAVU-01A
0 years, male, asian, stage:Stage II, alive, 2202 days
3.7
TCGA-DD-AADO-01A
0 years, male, asian, stage:Stage I, alive, 453 days
3.7
TCGA-DD-AACD-01A
0 years, male, asian, stage:Stage I, dead, 381 days
3.2
TCGA-ES-A2HS-01A
0 years, male, white, stage:Stage I, dead, 688 days
3.1
TCGA-DD-AADS-01A
0 years, male, asian, stage:Stage I, alive, 474 days
2.0
TCGA-DD-AADN-01A
0 years, male, asian, stage:Stage I, alive, 898 days
2.0
TCGA-CC-A123-01A
0 years, female, asian, stage:Stage IIIA, alive, 219 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
ZBTB7B is not prognostic in Liver Hepatocellular Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
23.7
Number of samples
231
Samples
Sample
Description
TPM
DO45159
0 years, male, NA, stage:3, alive, 1470 days
73.5
DO45263
0 years, male, NA, stage:3, dead, 270 days
65.5
DO48732
0 years, male, NA, stage:3, alive, 630 days
63.8
DO50816
0 years, male, NA, stage:2, alive, 390 days
63.7
DO23532
0 years, female, NA, stage:1, alive, 960 days
61.3
DO45107
0 years, female, NA, stage:2, alive, 1710 days
57.2
DO45253
0 years, male, NA, stage:2, alive, 870 days
56.6
DO23513
0 years, male, NA, stage:3, alive, 1200 days
52.4
DO50793
0 years, male, NA, stage:4, alive, 540 days
46.5
DO45249
0 years, male, NA, stage:1, alive, 630 days
44.7
DO45125
0 years, male, NA, stage:3, alive, 1680 days
43.6
DO48679
0 years, male, NA, stage:2, alive, 1200 days
43.5
DO45163
0 years, male, NA, stage:2, alive, 960 days
43.3
DO50809
0 years, male, NA, stage:3, dead, 720 days
42.8
DO45209
0 years, male, NA, stage:4, alive, 1350 days
42.5
DO23540
0 years, male, NA, stage:1, alive, 750 days
42.1
DO23512
0 years, male, NA, stage:1, alive, 1260 days
41.7
DO23518
0 years, male, NA, stage:2, alive, 1320 days
41.3
DO50844
0 years, male, NA, stage:4, alive, 300 days
41.2
DO23526
0 years, male, NA, stage:3, alive, 1050 days
41.2
DO45225
0 years, male, NA, stage:1, alive, 1050 days
40.9
DO48751
0 years, male, NA, stage:2, dead, 480 days
40.9
DO45099
0 years, male, NA, stage:3, alive, 1590 days
40.8
DO23533
0 years, male, NA, stage:2, alive, 900 days
40.0
DO48717
0 years, male, NA, stage:4, dead, 180 days
39.5
DO45205
0 years, female, NA, stage:2, dead, 90 days
39.2
DO48736
0 years, female, NA, stage:1, alive, 600 days
38.8
DO50811
0 years, male, NA, stage:1, alive, 450 days
38.7
DO23516
0 years, male, NA, stage:3, dead, 20 days
38.3
DO48701
0 years, male, NA, stage:2, alive, 780 days
37.5
DO45095
0 years, male, NA, stage:2, alive, 1620 days
37.2
DO45267
0 years, male, NA, stage:3, dead, 570 days
37.2
DO23528
0 years, female, NA, stage:2, alive, 1020 days
36.7
DO45241
0 years, male, NA, stage:1, alive, 1080 days
36.6
DO45243
0 years, female, NA, stage:3, alive, 930 days
36.2
DO23521
0 years, male, NA, stage:3, alive, 1110 days
36.0
DO50822
0 years, male, NA, stage:2, alive, 510 days
36.0
DO50829
0 years, male, NA, stage:3, alive, 570 days
35.6
DO48733
0 years, male, NA, stage:2, alive, 600 days
35.1
DO48672
0 years, male, NA, stage:2, alive, 450 days
34.7
DO50840
0 years, male, NA, stage:2, alive, 330 days
34.5
DO48682
0 years, female, NA, stage:3, dead, 120 days
34.3
DO45275
0 years, male, NA, stage:3, dead, 10 days
34.3
DO45215
0 years, male, NA, stage:2, alive, 1170 days
33.3
DO48700
0 years, female, NA, stage:2, alive, 810 days
33.1
DO45094
0 years, male, NA, stage:3, alive, 1650 days
32.9
DO45115
0 years, male, NA, stage:2, alive, 840 days
32.8
DO45257
0 years, male, NA, stage:3, alive, 810 days
32.7
DO45121
0 years, male, NA, stage:3, alive, 1530 days
32.5
DO45123
0 years, female, NA, stage:2, dead, 570 days
32.0
DO23529
0 years, male, NA, stage:4, alive, 930 days
31.6
DO227801
0 years, female, NA, stage:1, alive, 660 days
31.1
DO50798
0 years, male, NA, stage:3, dead, 30 days
30.8
DO50783
0 years, male, NA, stage:3, alive, 480 days
30.5
DO45277
0 years, male, NA, stage:3, alive, 600 days
30.2
DO50839
0 years, female, NA, stage:3, alive, 330 days
30.2
DO23527
0 years, male, NA, stage:1, alive, 1050 days
30.0
DO50804
0 years, male, NA, stage:2, alive, 720 days
29.9
DO23548
0 years, female, NA, stage:1, alive, 840 days
29.8
DO45281
0 years, male, NA, stage:4, alive, 750 days
29.8
DO48719
0 years, male, NA, stage:2, alive, 690 days
29.4
DO50791
0 years, female, NA, stage:1, dead, 480 days
29.2
DO48743
0 years, female, NA, stage:2, alive, 570 days
28.8
DO23541
0 years, male, NA, stage:2, alive, 930 days
28.7
DO50799
0 years, female, NA, stage:2, alive, 540 days
28.5
DO23511
0 years, female, NA, stage:3, dead, 180 days
28.5
DO48704
0 years, female, NA, stage:3, alive, 750 days
28.4
DO23543
0 years, male, NA, stage:2, alive, 1020 days
28.4
DO45185
0 years, male, NA, stage:2, alive, 600 days
28.1
DO45237
0 years, male, NA, stage:2, alive, 900 days
27.9
DO45101
0 years, male, NA, stage:2, alive, 1680 days
27.8
DO227643
0 years, male, NA, stage:2, alive, 1260 days
27.7
DO50857
0 years, male, NA, stage:2, alive, 210 days
27.7
DO48725
0 years, male, NA, stage:1, alive, 780 days
27.3
DO45259
0 years, male, NA, stage:3, alive, 330 days
26.9
DO23542
0 years, male, NA, stage:3, alive, 960 days
26.8
DO48706
0 years, male, NA, stage:2, alive, 870 days
26.6
DO50855
0 years, male, NA, stage:2, alive, 570 days
26.6
DO45193
0 years, female, NA, stage:4, dead, 120 days
26.5
DO23538
0 years, male, NA, stage:2, alive, 450 days
26.4
DO50803
0 years, female, NA, stage:1, alive, 540 days
26.3
DO45207
0 years, male, NA, stage:1, alive, 1050 days
26.2
DO23549
0 years, male, NA, stage:3, alive, 990 days
26.2
DO45113
0 years, male, NA, stage:3, alive, 1560 days
26.2
DO45092
0 years, male, NA, stage:4, dead, 1200 days
26.1
DO45235
0 years, female, NA, stage:1, alive, 900 days
25.9
DO23515
0 years, male, NA, stage:2, alive, 1230 days
25.9
DO48746
0 years, male, NA, stage:3, alive, 570 days
25.8
DO23534
0 years, male, NA, stage:2, alive, 840 days
25.8
DO45287
0 years, male, NA, stage:1, alive, 390 days
25.0
DO48723
0 years, male, NA, stage:1, alive, 600 days
24.8
DO45137
0 years, male, NA, stage:1, alive, 1320 days
24.7
DO23539
0 years, male, NA, stage:1, alive, 1110 days
24.6
DO45301
0 years, male, NA, stage:2, dead, 1440 days
24.3
DO45157
0 years, male, NA, stage:2, alive, 1980 days
24.1
DO50817
0 years, male, NA, stage:2, alive, 390 days
24.1
DO48747
0 years, male, NA, stage:3, alive, 540 days
23.8
DO50845
0 years, male, NA, stage:3, alive, 210 days
23.6
DO45117
0 years, female, NA, stage:2, dead, 1110 days
23.4
DO45279
0 years, male, NA, stage:3, alive, 1290 days
23.4
DO23519
0 years, male, NA, stage:3, alive, 630 days
23.3
DO50850
0 years, male, NA, stage:3, alive, 720 days
23.1
DO45169
0 years, male, NA, stage:3, alive, 1350 days
22.8
DO45227
0 years, female, NA, stage:2, alive, 1020 days
22.8
DO48737
0 years, male, NA, stage:1, alive, 720 days
22.7
DO45273
0 years, male, NA, stage:2, alive, 480 days
22.7
DO50832
0 years, male, NA, stage:3, alive, 90 days
22.7
DO23525
0 years, male, NA, stage:4, alive, 1050 days
22.5
DO48727
0 years, female, NA, stage:2, dead, 390 days
22.1
DO45165
0 years, male, NA, stage:2, alive, 690 days
21.9
DO23509
0 years, male, NA, stage:3, dead, 780 days
21.8
DO45153
0 years, female, NA, stage:2, alive, 1380 days
21.7
DO50802
0 years, male, NA, stage:2, alive, 930 days
21.6
DO48693
0 years, male, NA, stage:2, alive, 900 days
21.6
DO23545
0 years, male, NA, stage:2, dead, 570 days
21.2
DO45213
0 years, male, NA, stage:1, alive, 1200 days
21.0
DO48695
0 years, male, NA, stage:2, alive, 720 days
21.0
DO45203
0 years, female, NA, stage:2, alive, 1170 days
20.8
DO50805
0 years, male, NA, stage:2, alive, 690 days
20.8
DO45219
0 years, male, NA, stage:2, alive, 1080 days
20.7
DO23524
0 years, female, NA, stage:2, alive, 1050 days
20.5
DO45149
0 years, female, NA, stage:2, alive, 1260 days
20.5
DO23546
0 years, male, NA, stage:2, alive, 1050 days
20.1
DO23510
0 years, female, NA, stage:2, alive, 870 days
20.0
DO45097
0 years, male, NA, stage:3, alive, 1620 days
20.0
DO45139
0 years, male, NA, stage:3, alive, 1320 days
19.9
DO45171
0 years, male, NA, stage:3, alive, 600 days
19.8
DO45245
0 years, female, NA, stage:2, dead, 240 days
19.8
DO48677
0 years, male, NA, stage:3, alive, 1140 days
19.8
DO23517
0 years, male, NA, stage:2, alive, 1200 days
19.6
DO50800
0 years, male, NA, stage:2, alive, 510 days
19.5
DO45133
0 years, male, NA, stage:3, dead, 660 days
19.2
DO45155
0 years, male, NA, stage:2, alive, 2160 days
19.2
DO45131
0 years, male, NA, stage:4, dead, 360 days
19.1
DO48697
0 years, female, NA, stage:2, dead, 810 days
19.1
DO45197
0 years, male, NA, stage:2, alive, 1170 days
19.1
DO45096
0 years, male, NA, stage:2, dead, 1290 days
18.9
DO23536
0 years, male, NA, stage:2, alive, 930 days
18.8
DO48716
0 years, male, NA, stage:2, alive, 720 days
18.8
DO45141
0 years, male, NA, stage:2, alive, 1320 days
18.4
DO45111
0 years, male, NA, stage:2, alive, 1590 days
18.3
DO50825
0 years, male, NA, stage:2, alive, 390 days
18.3
DO45187
0 years, female, NA, stage:1, alive, 1260 days
18.2
DO45251
0 years, female, NA, stage:2, alive, 900 days
18.2
DO45189
0 years, female, NA, stage:2, alive, 1200 days
18.2
DO45231
0 years, male, NA, stage:2, alive, 930 days
18.1
DO45183
0 years, female, NA, stage:2, dead, 570 days
17.9
DO48742
0 years, male, NA, stage:2, alive, 600 days
17.8
DO50789
0 years, female, NA, stage:2, alive, 570 days
17.7
DO23547
0 years, male, NA, stage:1, alive, 1020 days
17.5
DO50814
0 years, male, NA, stage:3, alive, 420 days
17.4
DO45299
0 years, female, NA, stage:1, alive, 1440 days
17.4
DO50818
0 years, male, NA, stage:2, alive, 510 days
17.4
DO50859
0 years, male, NA, stage:2, alive, 180 days
17.2
DO45105
0 years, male, NA, stage:1, alive, 1680 days
17.1
DO45191
0 years, female, NA, stage:2, alive, 1200 days
16.6
DO45199
0 years, female, NA, stage:2, alive, 1350 days
16.5
DO45173
0 years, male, NA, stage:3, alive, 1170 days
16.4
DO45229
0 years, male, NA, stage:1, alive, 990 days
16.4
DO45179
0 years, female, NA, stage:2, alive, 600 days
16.2
DO45303
0 years, female, NA, stage:3, alive, 990 days
16.1
DO45181
0 years, female, NA, stage:2, alive, 1200 days
15.9
DO45103
0 years, male, NA, stage:3, alive, 450 days
15.9
DO50819
0 years, female, NA, stage:2, alive, 510 days
15.9
DO23544
0 years, male, NA, stage:2, alive, 960 days
15.7
DO45233
0 years, male, NA, stage:3, alive, 900 days
15.6
DO45283
0 years, male, NA, stage:3, alive, 510 days
15.6
DO23535
0 years, male, NA, stage:1, alive, 960 days
15.4
DO50776
0 years, male, NA, stage:1, alive, 690 days
15.4
DO23508
0 years, female, NA, stage:2, alive, 390 days
15.1
DO50820
0 years, female, NA, stage:3, alive, 510 days
15.0
DO45177
0 years, female, NA, stage:3, alive, 1260 days
14.9
DO48728
0 years, female, NA, stage:2, alive, 150 days
14.6
DO48712
0 years, male, NA, stage:2, alive, 810 days
14.6
DO45239
0 years, male, NA, stage:2, alive, 870 days
14.6
DO45297
0 years, female, NA, stage:4, dead, 1260 days
14.4
DO45175
0 years, male, NA, stage:2, alive, 1140 days
14.3
DO45261
0 years, male, NA, stage:3, alive, 990 days
14.1
DO45307
0 years, female, NA, stage:4, dead, 240 days
14.0
DO45211
0 years, male, NA, stage:3, alive, 240 days
13.8
DO48757
0 years, female, NA, stage:3, alive, 480 days
13.8
DO48760
0 years, female, NA, stage:2, alive, 690 days
13.6
DO45167
0 years, male, NA, stage:2, dead, 1440 days
13.3
DO50787
0 years, male, NA, stage:3, alive, 480 days
13.2
DO23523
0 years, male, NA, stage:3, alive, 1080 days
13.2
DO45221
0 years, female, NA, stage:4, dead, 390 days
13.1
DO48720
0 years, female, NA, stage:2, alive, 570 days
13.0
DO50778
0 years, male, NA, stage:4, alive, 630 days
13.0
DO48721
0 years, female, NA, stage:1, alive, 900 days
12.9
DO45269
0 years, male, NA, stage:3, alive, 750 days
12.7
DO48741
0 years, male, NA, stage:3, alive, 240 days
12.6
DO23514
0 years, male, NA, stage:2, alive, 1290 days
12.3
DO23531
0 years, female, NA, stage:3, alive, 900 days
12.2
DO48681
0 years, male, NA, stage:2, alive, 900 days
12.1
DO50774
0 years, female, NA, stage:2, alive, 720 days
11.9
DO45109
0 years, male, NA, stage:2, alive, 1590 days
11.8
DO50808
0 years, male, NA, stage:2, alive, 570 days
11.8
DO45201
0 years, male, NA, stage:1, alive, 900 days
11.7
DO50813
0 years, male, NA, stage:2, alive, 420 days
11.6
DO23537
0 years, male, NA, stage:2, dead, 900 days
11.6
DO50806
0 years, male, NA, stage:4, alive, 540 days
11.2
DO48674
0 years, male, NA, stage:2, alive, 1260 days
11.2
DO45247
0 years, female, NA, stage:2, alive, 210 days
11.2
DO45289
0 years, female, NA, stage:3, alive, 360 days
10.9
DO23530
0 years, male, NA, stage:4, dead, 180 days
10.9
DO50807
0 years, male, NA, stage:1, alive, 540 days
10.7
DO50785
0 years, male, NA, stage:4, dead, 90 days
10.6
DO45143
0 years, male, NA, stage:3, alive, 1290 days
10.5
DO45223
0 years, male, NA, stage:4, alive, 1020 days
10.4
DO45129
0 years, male, NA, stage:3, alive, 1470 days
10.2
DO45305
0 years, male, NA, stage:4, alive, 300 days
10.1
DO45255
0 years, male, NA, stage:3, alive, 720 days
10.0
DO48759
0 years, male, NA, stage:3, alive, 720 days
10.0
DO48730
0 years, female, NA, stage:2, alive, 630 days
9.9
DO45135
0 years, male, NA, stage:1, alive, 1410 days
9.9
DO23550
0 years, male, NA, stage:1, alive, 990 days
9.8
DO50815
0 years, male, NA, stage:3, alive, 150 days
9.6
DO23552
0 years, female, NA, stage:1, alive, 810 days
9.6
DO45161
0 years, male, NA, stage:2, dead, 540 days
9.5
DO48715
0 years, female, NA, stage:2, dead, 690 days
9.2
DO48761
0 years, male, NA, stage:2, alive, 870 days
8.8
DO45265
0 years, male, NA, stage:3, alive, 1020 days
8.8
DO45093
0 years, male, NA, stage:2, dead, 720 days
8.4
DO45145
0 years, male, NA, stage:3, dead, 60 days
8.3
DO45119
0 years, male, NA, stage:3, dead, 510 days
8.2
DO45091
0 years, male, NA, stage:2, dead, 1320 days
7.8
DO45127
0 years, male, NA, stage:3, dead, 420 days
7.8
DO45217
0 years, female, NA, stage:3, dead, 270 days
7.8
DO23551
0 years, male, NA, stage:3, dead, 150 days
7.7
DO45195
0 years, male, NA, stage:1, alive, 390 days
7.1
DO45285
0 years, male, NA, stage:3, alive, 480 days
3.8
Show allShow less
LIVER HEPATOCELLULAR CARCINOMA - Protein relative expression (CPTAC)
Number of samples
330
Samples
Sample ID
Sample type
nRPX
573
Tumor
1.1
951
Tumor
1.0
1021
Tumor
0.9
777
Tumor
0.9
523
Tumor
0.9
147
Tumor
0.9
527
Tumor
0.9
135
Tumor
0.9
445
Tumor
0.8
813
Tumor
0.8
647
Tumor
0.8
343
Tumor
0.8
574
Normal
0.8
741
Tumor
0.7
865
Tumor
0.7
525
Tumor
0.7
218
Normal
0.7
957
Tumor
0.7
217
Tumor
0.6
473
Tumor
0.6
823
Tumor
0.6
191
Tumor
0.6
635
Tumor
0.6
533
Tumor
0.6
515
Tumor
0.6
383
Tumor
0.6
357
Tumor
0.6
161
Tumor
0.6
1027
Tumor
0.5
953
Tumor
0.5
431
Tumor
0.5
451
Tumor
0.5
481
Tumor
0.5
257
Tumor
0.5
443
Tumor
0.5
497
Tumor
0.5
721
Tumor
0.5
915
Tumor
0.5
427
Tumor
0.5
975
Tumor
0.4
642
Normal
0.4
1025
Tumor
0.4
361
Tumor
0.4
955
Tumor
0.4
227
Tumor
0.4
814
Normal
0.4
728
Normal
0.4
471
Tumor
0.4
697
Tumor
0.4
415
Tumor
0.4
1031
Tumor
0.4
817
Tumor
0.4
393
Tumor
0.4
271
Tumor
0.4
553
Tumor
0.4
487
Tumor
0.4
663
Tumor
0.4
723
Tumor
0.4
231
Tumor
0.4
918
Normal
0.3
455
Tumor
0.3
922
Normal
0.3
745
Tumor
0.3
331
Tumor
0.3
863
Tumor
0.3
171
Tumor
0.3
355
Tumor
0.3
641
Tumor
0.3
327
Tumor
0.3
924
Normal
0.3
514
Normal
0.3
513
Tumor
0.3
141
Tumor
0.3
433
Tumor
0.3
921
Tumor
0.3
524
Normal
0.3
881
Tumor
0.3
911
Tumor
0.3
435
Tumor
0.3
926
Normal
0.3
461
Tumor
0.3
742
Normal
0.2
123
Tumor
0.2
963
Tumor
0.2
857
Tumor
0.2
313
Tumor
0.2
883
Tumor
0.2
738
Normal
0.2
818
Normal
0.2
187
Tumor
0.2
411
Tumor
0.2
824
Normal
0.2
387
Tumor
0.2
131
Tumor
0.2
882
Normal
0.2
195
Tumor
0.2
884
Normal
0.2
557
Tumor
0.2
858
Normal
0.2
545
Tumor
0.2
965
Tumor
0.2
923
Tumor
0.1
943
Tumor
0.1
977
Tumor
0.1
713
Tumor
0.1
916
Normal
0.1
755
Tumor
0.1
516
Normal
0.1
866
Normal
0.1
1026
Normal
0.1
816
Normal
0.1
1022
Normal
0.1
447
Tumor
0.1
395
Tumor
0.1
127
Tumor
0.1
952
Normal
0.1
436
Normal
0.1
615
Tumor
0.1
862
Normal
0.1
786
Normal
0.1
867
Tumor
0.1
213
Tumor
0.1
944
Normal
0.1
534
Normal
0.1
851
Tumor
0.1
756
Normal
0.1
1032
Normal
0.1
938
Normal
0.1
526
Normal
0.1
425
Tumor
0.1
966
Normal
0.1
125
Tumor
0.1
528
Normal
0.1
448
Normal
0.0
636
Normal
0.0
1041
Tumor
0.0
426
Normal
0.0
1044
Normal
0.0
113
Tumor
0.0
518
Normal
0.0
873
Tumor
0.0
554
Normal
0.0
396
Normal
0.0
964
Normal
0.0
696
Normal
0.0
185
Tumor
0.0
267
Tumor
0.0
394
Normal
0.0
111
Normal
0.0
375
Tumor
0.0
1028
Normal
0.0
277
Tumor
0.0
568
Normal
0.0
258
Normal
0.0
214
Normal
0.0
956
Normal
0.0
517
Tumor
0.0
493
Tumor
0.0
537
Tumor
0.0
686
Normal
0.0
145
Tumor
0.0
428
Normal
0.0
616
Normal
0.0
212
Normal
0.0
852
Normal
0.0
222
Normal
0.0
341
Tumor
0.0
698
Normal
0.0
136
Normal
0.0
861
Tumor
0.0
1013
Tumor
0.0
937
Tumor
0.0
868
Normal
-0.1
228
Normal
-0.1
223
Tumor
-0.1
477
Tumor
-0.1
925
Tumor
-0.1
137
Tumor
-0.1
414
Normal
-0.1
954
Normal
-0.1
1045
Tumor
-0.1
567
Tumor
-0.1
864
Normal
-0.1
912
Normal
-0.1
297
Tumor
-0.1
1042
Normal
-0.1
462
Normal
-0.1
467
Tumor
-0.1
546
Normal
-0.1
968
Normal
-0.1
232
Normal
-0.1
446
Normal
-0.1
564
Normal
-0.1
388
Normal
-0.1
286
Normal
-0.1
976
Normal
-0.1
492
Normal
-0.1
628
Normal
-0.1
1046
Normal
-0.1
785
Tumor
-0.1
386
Normal
-0.1
285
Tumor
-0.1
314
Normal
-0.1
432
Normal
-0.1
328
Normal
-0.1
356
Normal
-0.1
468
Normal
-0.1
572
Normal
-0.1
332
Normal
-0.1
422
Normal
-0.1
483
Tumor
-0.1
744
Normal
-0.1
434
Normal
-0.1
474
Normal
-0.1
452
Normal
-0.1
392
Normal
-0.1
484
Normal
-0.1
114
Normal
-0.1
353
Tumor
-0.1
464
Normal
-0.1
1043
Tumor
-0.1
743
Tumor
-0.1
722
Normal
-0.1
424
Normal
-0.2
172
Normal
-0.2
535
Tumor
-0.2
878
Normal
-0.2
618
Normal
-0.2
456
Normal
-0.2
283
Tumor
-0.2
778
Normal
-0.2
746
Normal
-0.2
112
Tumor
-0.2
376
Normal
-0.2
162
Normal
-0.2
298
Normal
-0.2
664
Normal
-0.2
196
Normal
-0.2
958
Normal
-0.2
221
Tumor
-0.2
558
Normal
-0.2
536
Normal
-0.2
727
Tumor
-0.2
364
Normal
-0.2
494
Normal
-0.2
358
Normal
-0.2
423
Tumor
-0.2
261
Tumor
-0.2
874
Normal
-0.2
716
Normal
-0.2
482
Normal
-0.2
472
Normal
-0.2
617
Tumor
-0.2
488
Normal
-0.2
126
Normal
-0.2
128
Normal
-0.2
284
Normal
-0.2
262
Normal
-0.2
714
Normal
-0.2
342
Normal
-0.3
312
Normal
-0.3
648
Normal
-0.3
491
Tumor
-0.3
344
Normal
-0.3
1014
Normal
-0.3
412
Normal
-0.3
365
Tumor
-0.3
278
Normal
-0.3
983
Tumor
-0.3
498
Normal
-0.3
917
Tumor
-0.3
352
Normal
-0.3
142
Normal
-0.3
538
Normal
-0.3
132
Normal
-0.3
268
Normal
-0.3
465
Tumor
-0.3
666
Normal
-0.3
186
Normal
-0.3
466
Normal
-0.3
272
Normal
-0.3
138
Normal
-0.3
463
Tumor
-0.3
148
Normal
-0.3
1015
Tumor
-0.3
362
Normal
-0.3
984
Normal
-0.3
224
Normal
-0.3
627
Tumor
-0.4
413
Tumor
-0.4
416
Normal
-0.4
978
Normal
-0.4
188
Normal
-0.4
877
Tumor
-0.4
913
Tumor
-0.4
662
Normal
-0.4
478
Normal
-0.4
367
Tumor
-0.4
384
Normal
-0.4
672
Normal
-0.4
354
Normal
-0.4
421
Tumor
-0.4
311
Tumor
-0.4
914
Normal
-0.4
366
Normal
-0.4
982
Normal
-0.4
981
Tumor
-0.4
444
Normal
-0.5
563
Tumor
-0.5
1016
Normal
-0.5
124
Normal
-0.5
967
Tumor
-0.5
665
Tumor
-0.5
715
Tumor
-0.5
351
Tumor
-0.5
737
Tumor
-0.6
385
Tumor
-0.6
146
Normal
-0.6
815
Tumor
-0.6
192
Normal
-0.6
685
Tumor
-0.6
211
Tumor
-0.6
661
Tumor
-0.6
671
Tumor
-0.6
368
Normal
-0.7
391
Tumor
-0.7
363
Tumor
-0.7
724
Normal
-0.9
571
Tumor
-0.9
695
Tumor
-0.9
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LIVER CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
