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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
TOR2A is potential prognostic, high expression is unfavorable in Liver Hepatocellular Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
8.9
Number of samples
362
Samples
Sample
Description
TPM
TCGA-CC-5263-01A
0 years, male, asian, stage:Stage IIIA, dead, 129 days
28.1
TCGA-DD-A4NN-01A
0 years, female, white, stage:Stage I, dead, 899 days
24.1
TCGA-EP-A2KA-01A
0 years, female, white, stage:Stage IIIA, dead, 627 days
21.8
TCGA-CC-A8HU-01A
0 years, female, asian, stage:Stage IIIA, dead, 344 days
21.6
TCGA-BC-A8YO-01A
0 years, female, white, stage:Stage IIIC, alive, 562 days
20.9
TCGA-WX-AA44-01A
0 years, female, white, stage:Stage I, alive, 615 days
20.8
TCGA-DD-A4NH-01A
0 years, female, white, stage:Stage IIIB, alive, 917 days
20.2
TCGA-G3-A25X-01A
0 years, male, asian, stage:Stage II, alive, 1779 days
20.2
TCGA-KR-A7K8-01A
0 years, male, stage:Stage I, alive, 906 days
20.1
TCGA-CC-5264-01A
0 years, male, asian, stage:Stage IIIA, dead, 102 days
20.0
TCGA-DD-AAD5-01A
0 years, male, asian, stage:Stage I, alive, 1345 days
19.8
TCGA-RC-A7SH-01A
0 years, male, asian, stage:Stage II, alive, 468 days
19.1
TCGA-CC-5260-01A
0 years, female, asian, stage:Stage IIIC, dead, 87 days
18.5
TCGA-G3-AAV7-01A
0 years, male, asian, stage:Stage II, alive, 361 days
18.3
TCGA-DD-A114-01A
0 years, male, black or african american, stage:Stage II, dead, 1149 days
18.3
TCGA-DD-AACY-01A
0 years, male, asian, stage:Stage I, alive, 1450 days
17.0
TCGA-DD-A4NR-01A
0 years, female, white, stage:Stage I, dead, 9 days
16.7
TCGA-ZS-A9CF-01A
0 years, male, white, stage:Stage II, alive, 2412 days
16.7
TCGA-DD-AAE6-01A
0 years, female, asian, stage:Stage I, alive, 141 days
16.5
TCGA-DD-AACQ-01A
0 years, male, asian, stage:Stage II, dead, 432 days
16.5
TCGA-CC-5261-01A
0 years, male, asian, stage:Stage II, dead, 97 days
15.9
TCGA-BC-A216-01A
0 years, female, white, stage:Stage IIIA, alive, 1351 days
15.9
TCGA-CC-A7IG-01A
0 years, male, asian, stage:Stage II, dead, 299 days
15.6
TCGA-DD-AADY-01A
0 years, female, asian, stage:Stage I, alive, 555 days
15.6
TCGA-BD-A2L6-01A
0 years, male, white, stage:'--, alive, 1363 days
15.5
TCGA-CC-A5UD-01A
0 years, male, asian, stage:Stage IIIA, dead, 304 days
15.4
TCGA-G3-A3CG-01A
0 years, male, white, stage:Stage I, alive, 673 days
15.4
TCGA-DD-AAVS-01A
0 years, male, asian, stage:Stage I, alive, 1823 days
15.3
TCGA-DD-AAVV-01A
0 years, male, asian, stage:Stage II, alive, 2455 days
15.0
TCGA-DD-AAD1-01A
0 years, female, asian, stage:Stage I, alive, 564 days
14.6
TCGA-PD-A5DF-01A
0 years, female, white, stage:Stage IIIB, dead, 639 days
14.5
TCGA-CC-A3MB-01A
0 years, male, asian, stage:Stage IIIA, dead, 315 days
14.5
TCGA-FV-A4ZQ-01A
0 years, male, white, stage:Stage I, alive, 12 days
14.2
TCGA-UB-A7MF-01A
0 years, male, white, stage:Stage IIIA, dead, 214 days
14.2
TCGA-DD-AACU-01A
0 years, male, asian, stage:Stage I, alive, 1567 days
14.1
TCGA-DD-A73B-01A
0 years, female, white, stage:Stage I, dead, 283 days
14.0
TCGA-UB-A7MA-01A
0 years, female, white, stage:Stage II, alive, 848 days
13.8
TCGA-DD-A3A9-01A
0 years, female, white, stage:Stage IVB, dead, 931 days
13.7
TCGA-DD-A1EC-01A
0 years, female, white, stage:Stage I, alive, 602 days
13.7
TCGA-ZP-A9CV-01A
0 years, male, white, stage:'--, dead, 1088 days
13.5
TCGA-CC-A3M9-01A
0 years, male, asian, stage:Stage IIIA, dead, 300 days
13.4
TCGA-BC-A10Y-01A
0 years, male, white, stage:'--, dead, 711 days
13.4
TCGA-XR-A8TD-01A
0 years, female, white, stage:Stage IIIB, alive, 1030 days
13.3
TCGA-DD-AACL-01A
0 years, female, asian, stage:Stage I, dead, 107 days
13.3
TCGA-FV-A2QR-01A
0 years, male, white, stage:Stage I, dead, 581 days
13.3
TCGA-DD-A11D-01A
0 years, female, white, stage:Stage I, dead, 1560 days
13.3
TCGA-DD-A1EH-01A
0 years, male, white, stage:Stage III, alive, 1495 days
13.1
TCGA-DD-A118-01A
0 years, female, white, stage:Stage II, alive, 3437 days
13.0
TCGA-ED-A5KG-01A
0 years, female, asian, stage:Stage II, alive, 854 days
12.9
TCGA-G3-A25U-01A
0 years, female, asian, stage:Stage I, alive, 1636 days
12.8
TCGA-DD-AACK-01A
0 years, male, asian, stage:Stage I, alive, 9 days
12.8
TCGA-GJ-A6C0-01A
0 years, female, white, stage:Stage II, dead, 31 days
12.8
TCGA-5C-AAPD-01A
0 years, male, asian, stage:Stage II, alive, 20 days
12.7
TCGA-G3-A25Y-01A
0 years, female, asian, stage:Stage I, dead, 452 days
12.7
TCGA-KR-A7K7-01A
0 years, female, white, stage:Stage II, alive, 951 days
12.7
TCGA-DD-A39Y-01A
0 years, male, asian, stage:Stage I, dead, 171 days
12.6
TCGA-DD-AACH-01A
0 years, male, asian, stage:Stage II, dead, 195 days
12.6
TCGA-DD-A4NA-01A
0 years, female, white, stage:Stage IIIC, alive, 1008 days
12.4
TCGA-BC-A3KF-01A
0 years, female, white, stage:Stage I, alive, 8 days
12.3
TCGA-3K-AAZ8-01A
0 years, male, black or african american, stage:Stage IIIB, alive, 396 days
12.3
TCGA-LG-A9QC-01A
0 years, male, white, stage:Stage I, alive, 425 days
12.2
TCGA-GJ-A9DB-01A
0 years, male, white, stage:Stage I, dead, 67 days
12.2
TCGA-ED-A66Y-01A
0 years, female, asian, stage:Stage IIIA, dead, 296 days
12.2
TCGA-FV-A495-01A
0 years, female, white, stage:Stage II, alive, 1 days
12.2
TCGA-YA-A8S7-01A
0 years, male, white, stage:Stage IIIA, dead, 412 days
12.1
TCGA-DD-A3A4-01A
0 years, male, white, stage:Stage IIIA, dead, 612 days
12.0
TCGA-UB-A7MD-01A
0 years, male, black or african american, stage:Stage I, dead, 52 days
12.0
TCGA-KR-A7K2-01A
0 years, male, white, stage:Stage I, alive, 829 days
12.0
TCGA-4R-AA8I-01A
0 years, male, white, stage:Stage II, dead, 262 days
12.0
TCGA-DD-AADP-01A
0 years, male, asian, stage:Stage I, alive, 458 days
11.9
TCGA-ED-A4XI-01A
0 years, male, asian, stage:Stage II, alive, 819 days
11.9
TCGA-DD-AACF-01A
0 years, male, asian, stage:Stage I, dead, 365 days
11.7
TCGA-G3-A7M9-01A
0 years, male, white, stage:Stage IIIB, dead, 56 days
11.7
TCGA-UB-A7MB-01A
0 years, male, white, stage:Stage II, alive, 601 days
11.6
TCGA-K7-A6G5-01A
0 years, male, white, stage:Stage I, alive, 512 days
11.6
TCGA-DD-AADW-01A
0 years, male, asian, stage:Stage I, alive, 587 days
11.6
TCGA-2Y-A9H5-01A
0 years, female, white, stage:Stage I, dead, 555 days
11.5
TCGA-FV-A3R2-01A
0 years, male, white, stage:Stage I, dead, 194 days
11.5
TCGA-DD-A73E-01A
0 years, male, white, stage:Stage I, alive, 44 days
11.4
TCGA-DD-AADI-01A
0 years, female, asian, stage:Stage I, alive, 1085 days
11.4
TCGA-BW-A5NO-01A
0 years, male, black or african american, stage:Stage IIIA, alive, 20 days
11.4
TCGA-UB-AA0U-01A
0 years, male, white, stage:Stage II, alive, 327 days
11.3
TCGA-BD-A3EP-01A
0 years, female, black or african american, stage:Stage I, alive, 409 days
11.3
TCGA-DD-AADD-01A
0 years, male, asian, stage:Stage I, alive, 1231 days
11.2
TCGA-WQ-A9G7-01A
0 years, female, white, stage:'--, alive, 30 days
11.2
TCGA-ED-A627-01A
0 years, male, white, stage:Stage I, alive, 423 days
11.1
TCGA-CC-A1HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 101 days
11.0
TCGA-DD-A73A-01A
0 years, male, white, stage:Stage I, alive, 728 days
11.0
TCGA-BC-A10W-01A
0 years, male, asian, stage:'--, dead, 91 days
11.0
TCGA-DD-A4NB-01A
0 years, male, white, stage:Stage I, alive, 989 days
10.9
TCGA-G3-A7M6-01A
0 years, female, white, stage:Stage I, alive, 632 days
10.8
TCGA-DD-AAW3-01A
0 years, male, asian, stage:Stage I, alive, 1633 days
10.7
TCGA-MI-A75E-01A
0 years, male, white, stage:Stage IIIC, alive, 507 days
10.7
TCGA-FV-A3R3-01A
0 years, female, white, stage:Stage I, dead, 366 days
10.6
TCGA-BC-A217-01A
0 years, female, white, stage:Stage II, dead, 1397 days
10.5
TCGA-ZS-A9CD-01A
0 years, male, white, stage:Stage II, dead, 1386 days
10.5
TCGA-CC-5262-01A
0 years, male, asian, stage:Stage IIIC, dead, 103 days
10.5
TCGA-2Y-A9H8-01A
0 years, female, white, stage:'--, dead, 633 days
10.5
TCGA-CC-A3MC-01A
0 years, male, asian, stage:Stage IIIA, alive, 363 days
10.4
TCGA-ED-A7XO-01A
0 years, male, asian, stage:Stage IIIA, alive, 427 days
10.4
TCGA-ES-A2HT-01A
0 years, male, black or african american, stage:Stage I, dead, 438 days
10.4
TCGA-G3-AAV6-01A
0 years, female, white, stage:Stage IIIA, dead, 65 days
10.3
TCGA-DD-AACS-01A
0 years, male, asian, stage:Stage I, alive, 1804 days
10.3
TCGA-GJ-A3OU-01A
0 years, male, white, stage:Stage I, alive, 879 days
10.3
TCGA-CC-A7IJ-01A
0 years, male, asian, stage:Stage II, alive, 382 days
10.2
TCGA-RC-A6M6-01A
0 years, male, white, stage:Stage II, alive, 9 days
10.2
TCGA-G3-AAUZ-01A
0 years, male, stage:Stage I, alive, 480 days
10.1
TCGA-2Y-A9GS-01A
0 years, male, white, stage:'--, dead, 724 days
10.1
TCGA-DD-A39Z-01A
0 years, female, stage:Stage II, dead, 601 days
10.1
TCGA-2Y-A9H0-01A
0 years, male, white, stage:Stage IIIA, alive, 3675 days
10.0
TCGA-G3-AAV5-01A
0 years, male, white, stage:Stage II, alive, 354 days
10.0
TCGA-2Y-A9H6-01A
0 years, female, white, stage:Stage I, alive, 357 days
10.0
TCGA-CC-A9FW-01A
0 years, male, asian, stage:Stage IIIA, alive, 248 days
10.0
TCGA-DD-AAD0-01A
0 years, female, asian, stage:Stage I, alive, 137 days
9.9
TCGA-MR-A8JO-01A
0 years, male, white, stage:Stage I, alive, 330 days
9.9
TCGA-5C-A9VH-01A
0 years, male, white, stage:Stage I, alive, 322 days
9.9
TCGA-MI-A75G-01A
0 years, male, white, stage:Stage II, alive, 698 days
9.9
TCGA-DD-AAEH-01A
0 years, male, asian, stage:Stage I, alive, 784 days
9.9
TCGA-DD-AACN-01A
0 years, male, asian, stage:Stage I, alive, 1302 days
9.9
TCGA-HP-A5N0-01A
0 years, female, stage:'--, dead, 752 days
9.9
TCGA-G3-A5SI-01A
0 years, male, asian, stage:Stage II, dead, 768 days
9.8
TCGA-FV-A3I1-01A
0 years, female, white, stage:Stage II, dead, 247 days
9.8
TCGA-BC-A3KG-01A
0 years, female, white, stage:Stage II, alive, 680 days
9.8
TCGA-2Y-A9GY-01A
0 years, female, white, stage:Stage II, dead, 757 days
9.8
TCGA-DD-AAD2-01A
0 years, male, asian, stage:Stage I, alive, 658 days
9.7
TCGA-EP-A3RK-01A
0 years, male, white, stage:Stage IIIA, alive, 363 days
9.7
TCGA-CC-A5UE-01A
0 years, male, asian, stage:Stage IIIB, dead, 272 days
9.7
TCGA-DD-A73G-01A
0 years, female, white, stage:Stage I, alive, 3478 days
9.6
TCGA-BC-A10Q-01A
0 years, female, white, stage:'--, dead, 1135 days
9.5
TCGA-DD-A4NG-01A
0 years, male, white, stage:Stage IIIA, dead, 802 days
9.5
TCGA-EP-A2KC-01A
0 years, male, black or african american, stage:Stage I, dead, 19 days
9.5
TCGA-RC-A7SF-01A
0 years, male, asian, stage:Stage I, alive, 579 days
9.5
TCGA-DD-AA3A-01A
0 years, female, white, stage:Stage I, dead, 410 days
9.5
TCGA-DD-AACP-01A
0 years, male, asian, stage:Stage I, alive, 415 days
9.4
TCGA-FV-A4ZP-01A
0 years, male, white, stage:Stage IIIA, dead, 2486 days
9.4
TCGA-ED-A97K-01A
0 years, male, asian, stage:Stage IIIA, alive, 6 days
9.4
TCGA-EP-A2KB-01A
0 years, female, white, stage:Stage I, dead, 596 days
9.4
TCGA-DD-AAVZ-01A
0 years, male, asian, stage:Stage I, alive, 1900 days
9.4
TCGA-G3-A3CH-01A
0 years, male, asian, stage:Stage IIIA, alive, 780 days
9.4
TCGA-2Y-A9HB-01A
0 years, male, stage:Stage I, alive, 260 days
9.3
TCGA-MI-A75H-01A
0 years, male, white, stage:'--, alive, 747 days
9.3
TCGA-DD-AAVQ-01A
0 years, male, asian, stage:Stage I, alive, 2728 days
9.3
TCGA-DD-A1EE-01A
0 years, male, white, stage:Stage IIIA, dead, 349 days
9.3
TCGA-MI-A75I-01A
0 years, male, black or african american, stage:'--, alive, 630 days
9.2
TCGA-DD-A1EG-01A
0 years, male, white, stage:Stage I, dead, 1372 days
9.2
TCGA-XR-A8TG-01A
0 years, male, white, stage:Stage I, alive, 898 days
9.1
TCGA-O8-A75V-01A
0 years, male, stage:Stage I, alive, 538 days
9.1
TCGA-WJ-A86L-01A
0 years, female, white, stage:Stage I, alive, 345 days
9.0
TCGA-DD-AACW-01A
0 years, male, asian, stage:Stage I, alive, 1424 days
9.0
TCGA-DD-AAE0-01A
0 years, female, asian, stage:Stage IIIA, alive, 555 days
9.0
TCGA-CC-A5UC-01A
0 years, male, asian, stage:Stage IIIA, dead, 347 days
8.8
TCGA-DD-AACB-01A
0 years, female, asian, stage:Stage I, alive, 2324 days
8.8
TCGA-DD-A4NS-01A
0 years, female, white, stage:Stage I, dead, 2456 days
8.8
TCGA-G3-A7M7-01A
0 years, male, white, stage:Stage I, alive, 361 days
8.8
TCGA-K7-AAU7-01A
0 years, male, white, stage:Stage II, alive, 359 days
8.7
TCGA-HP-A5MZ-01A
0 years, male, stage:Stage I, dead, 91 days
8.7
TCGA-ED-A7PY-01A
0 years, female, asian, stage:Stage II, alive, 390 days
8.7
TCGA-DD-A1EJ-01A
0 years, female, white, stage:Stage IIIC, dead, 1005 days
8.7
TCGA-G3-A3CI-01A
0 years, male, white, stage:Stage I, alive, 180 days
8.7
TCGA-DD-A73F-01A
0 years, female, white, stage:Stage I, alive, 1085 days
8.7
TCGA-DD-AAEG-01A
0 years, female, asian, stage:Stage I, alive, 719 days
8.7
TCGA-DD-AADJ-01A
0 years, female, asian, stage:Stage I, alive, 1066 days
8.6
TCGA-ZP-A9CZ-01A
0 years, male, asian, stage:'--, alive, 706 days
8.6
TCGA-DD-A4NJ-01A
0 years, female, white, stage:Stage II, alive, 928 days
8.6
TCGA-5R-AA1D-01A
0 years, female, white, stage:Stage IIIA, alive, 449 days
8.6
TCGA-FV-A23B-01A
0 years, female, white, stage:Stage II, dead, 1852 days
8.6
TCGA-DD-A39X-01A
0 years, female, white, stage:Stage I, dead, 1694 days
8.5
TCGA-XR-A8TC-01A
0 years, female, white, stage:Stage I, alive, 1339 days
8.5
TCGA-DD-AADC-01A
0 years, male, asian, stage:Stage I, dead, 425 days
8.5
TCGA-LG-A6GG-01A
0 years, female, white, stage:Stage II, alive, 387 days
8.5
TCGA-DD-AACX-01A
0 years, male, asian, stage:Stage II, alive, 170 days
8.5
TCGA-CC-A7IH-01A
0 years, male, asian, stage:Stage IIIA, alive, 365 days
8.5
TCGA-DD-A4NP-01A
0 years, male, white, stage:Stage I, alive, 3308 days
8.5
TCGA-DD-AACC-01A
0 years, male, asian, stage:Stage I, dead, 1685 days
8.4
TCGA-DD-A4ND-01A
0 years, female, white, stage:Stage I, alive, 2746 days
8.4
TCGA-RC-A6M5-01A
0 years, female, white, stage:Stage IVA, alive, 15 days
8.4
TCGA-DD-A115-01A
0 years, male, white, stage:Stage IIIA, dead, 2542 days
8.4
TCGA-2Y-A9GT-01A
0 years, male, white, stage:Stage I, dead, 1624 days
8.4
TCGA-DD-AADQ-01A
0 years, male, asian, stage:Stage II, alive, 436 days
8.3
TCGA-BC-A69H-01A
0 years, male, white, stage:Stage II, alive, 444 days
8.3
TCGA-DD-A4NE-01A
0 years, female, white, stage:Stage IIIA, dead, 660 days
8.2
TCGA-DD-A1EA-01A
0 years, male, asian, stage:Stage II, alive, 2415 days
8.1
TCGA-ED-A8O6-01A
0 years, female, asian, stage:Stage IIIA, dead, 56 days
8.1
TCGA-DD-A1EL-01A
0 years, male, black or african american, stage:Stage II, dead, 415 days
8.1
TCGA-G3-A25T-01A
0 years, female, white, stage:Stage IIIA, alive, 1553 days
8.1
TCGA-G3-A25S-01A
0 years, male, white, stage:Stage I, dead, 416 days
8.1
TCGA-FV-A2QQ-01A
0 years, male, white, stage:Stage I, alive, 729 days
8.0
TCGA-DD-AACT-01A
0 years, female, asian, stage:Stage I, alive, 1562 days
8.0
TCGA-CC-A8HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 140 days
8.0
TCGA-K7-A5RF-01A
0 years, male, white, stage:Stage I, alive, 631 days
8.0
TCGA-DD-A1EI-01A
0 years, male, asian, stage:Stage I, alive, 183 days
7.9
TCGA-2Y-A9H3-01A
0 years, male, white, stage:Stage II, alive, 1516 days
7.9
TCGA-DD-A4NO-01A
0 years, male, white, stage:Stage I, alive, 2245 days
7.9
TCGA-XR-A8TE-01A
0 years, male, white, stage:Stage IIIA, alive, 925 days
7.9
TCGA-2Y-A9H2-01A
0 years, female, white, stage:Stage I, alive, 1731 days
7.8
TCGA-DD-AADA-01A
0 years, female, asian, stage:Stage I, alive, 1233 days
7.8
TCGA-FV-A3I0-01A
0 years, female, white, stage:Stage II, alive, 848 days
7.8
TCGA-2Y-A9GW-01A
0 years, male, white, stage:Stage I, dead, 1271 days
7.8
TCGA-MI-A75C-01A
0 years, male, white, stage:Stage I, alive, 291 days
7.8
TCGA-DD-A3A3-01A
0 years, male, asian, stage:Stage I, dead, 535 days
7.8
TCGA-5R-AA1C-01A
0 years, male, white, stage:Stage II, alive, 520 days
7.8
TCGA-RC-A7S9-01A
0 years, female, asian, stage:Stage I, alive, 640 days
7.7
TCGA-DD-AACD-01A
0 years, male, asian, stage:Stage I, dead, 381 days
7.7
TCGA-DD-AAEE-01A
0 years, male, asian, stage:Stage I, alive, 810 days
7.7
TCGA-DD-A3A5-01A
0 years, female, white, stage:Stage III, dead, 3125 days
7.7
TCGA-G3-A6UC-01A
0 years, male, white, stage:Stage IIIB, alive, 671 days
7.6
TCGA-ZP-A9CY-01A
0 years, female, white, stage:'--, alive, 782 days
7.6
TCGA-G3-AAV2-01A
0 years, male, white, stage:Stage I, alive, 372 days
7.6
TCGA-BC-A10R-01A
0 years, female, white, stage:'--, dead, 308 days
7.6
TCGA-BC-A10S-01A
0 years, male, white, stage:'--, dead, 1423 days
7.6
TCGA-5R-AAAM-01A
0 years, female, white, stage:Stage II, dead, 46 days
7.6
TCGA-DD-AAVY-01A
0 years, male, asian, stage:Stage IIIA, alive, 1970 days
7.5
TCGA-CC-A8HS-01A
0 years, male, asian, stage:Stage IIIC, dead, 300 days
7.5
TCGA-LG-A9QD-01A
0 years, male, white, stage:Stage IIIA, alive, 366 days
7.5
TCGA-G3-A25V-01A
0 years, male, white, stage:Stage I, alive, 860 days
7.5
TCGA-ZP-A9D1-01A
0 years, female, white, stage:'--, alive, 21 days
7.5
TCGA-CC-A7IF-01A
0 years, male, asian, stage:Stage IIIA, dead, 649 days
7.4
TCGA-CC-A7IL-01A
0 years, male, asian, stage:Stage IIIA, dead, 278 days
7.4
TCGA-DD-A1EK-01A
0 years, female, white, stage:Stage IVB, dead, 558 days
7.3
TCGA-G3-AAV3-01A
0 years, female, white, stage:Stage II, alive, 412 days
7.3
TCGA-ES-A2HS-01A
0 years, male, white, stage:Stage I, dead, 688 days
7.3
TCGA-DD-A39W-01A
0 years, female, white, stage:Stage III, dead, 827 days
7.3
TCGA-ED-A66X-01A
0 years, male, asian, stage:Stage IIIA, alive, 406 days
7.3
TCGA-DD-AADO-01A
0 years, male, asian, stage:Stage I, alive, 453 days
7.3
TCGA-CC-A8HV-01A
0 years, female, asian, stage:Stage II, dead, 279 days
7.3
TCGA-XR-A8TF-01A
0 years, male, white, stage:Stage I, dead, 693 days
7.3
TCGA-DD-AACJ-01A
0 years, male, asian, stage:Stage II, alive, 2102 days
7.3
TCGA-G3-A5SL-01A
0 years, male, white, stage:Stage II, alive, 621 days
7.2
TCGA-DD-AAVR-01A
0 years, male, asian, stage:Stage I, alive, 2513 days
7.2
TCGA-EP-A12J-01A
0 years, male, black or african american, stage:Stage I, alive, 570 days
7.1
TCGA-DD-AACI-01A
0 years, male, asian, stage:Stage II, alive, 1618 days
7.1
TCGA-G3-A3CK-01A
0 years, male, asian, stage:Stage I, alive, 585 days
7.1
TCGA-ED-A82E-01A
0 years, female, asian, stage:Stage IIIA, alive, 408 days
7.1
TCGA-G3-AAV1-01A
0 years, male, asian, stage:Stage IIIC, dead, 359 days
7.1
TCGA-2Y-A9H4-01A
0 years, male, black or african american, stage:Stage I, alive, 1452 days
7.1
TCGA-ED-A459-01A
0 years, male, asian, stage:Stage II, alive, 910 days
7.0
TCGA-DD-AADB-01A
0 years, male, asian, stage:Stage I, alive, 1242 days
7.0
TCGA-G3-A5SM-01A
0 years, male, white, stage:Stage II, alive, 520 days
7.0
TCGA-DD-A4NV-01A
0 years, male, white, stage:Stage IIIA, alive, 2398 days
7.0
TCGA-BC-A10Z-01A
0 years, female, white, stage:Stage I, dead, 34 days
6.9
TCGA-EP-A3JL-01A
0 years, male, white, stage:Stage I, alive, 303 days
6.9
TCGA-DD-AAD8-01A
0 years, female, asian, stage:Stage I, alive, 1219 days
6.8
TCGA-DD-AADL-01A
0 years, male, asian, stage:Stage I, alive, 636 days
6.7
TCGA-G3-AAV0-01A
0 years, male, asian, stage:Stage I, alive, 476 days
6.7
TCGA-DD-A3A8-01A
0 years, male, white, stage:Stage II, dead, 11 days
6.7
TCGA-ED-A7PX-01A
0 years, female, asian, stage:Stage II, alive, 6 days
6.7
TCGA-DD-AAW2-01A
0 years, male, asian, stage:Stage I, alive, 1855 days
6.7
TCGA-DD-AAE2-01A
0 years, male, asian, stage:Stage I, alive, 638 days
6.6
TCGA-DD-AAE1-01A
0 years, male, asian, stage:Stage I, alive, 552 days
6.6
TCGA-CC-A7IK-01A
0 years, male, asian, stage:Stage IIIA, dead, 262 days
6.6
TCGA-2Y-A9H7-01A
0 years, female, white, stage:Stage I, alive, 1168 days
6.6
TCGA-CC-A3MA-01A
0 years, male, asian, stage:Stage IIIA, dead, 303 days
6.6
TCGA-DD-AADG-01A
0 years, male, asian, stage:Stage IIIA, alive, 1145 days
6.6
TCGA-DD-AAD3-01A
0 years, male, asian, stage:Stage I, alive, 1295 days
6.6
TCGA-UB-A7ME-01A
0 years, male, asian, stage:Stage I, alive, 486 days
6.5
TCGA-WX-AA47-01A
0 years, female, white, stage:Stage IIIA, dead, 556 days
6.5
TCGA-DD-A4NQ-01A
0 years, male, white, stage:Stage II, dead, 373 days
6.5
TCGA-ED-A8O5-01A
0 years, female, asian, stage:Stage IIIA, alive, 406 days
6.5
TCGA-RG-A7D4-01A
0 years, male, black or african american, stage:Stage II, alive, 1098 days
6.5
TCGA-BC-A112-01A
0 years, male, white, stage:'--, dead, 153 days
6.5
TCGA-G3-AAV4-01A
0 years, female, white, stage:Stage I, dead, 27 days
6.5
TCGA-BC-A5W4-01A
0 years, male, white, stage:Stage IIIA, dead, 547 days
6.4
TCGA-DD-AAE9-01A
0 years, male, asian, stage:Stage I, alive, 722 days
6.4
TCGA-DD-AACV-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
6.4
TCGA-2Y-A9GV-01A
0 years, female, white, stage:Stage I, dead, 2532 days
6.4
TCGA-DD-A113-01A
0 years, female, white, stage:Stage II, alive, 2425 days
6.4
TCGA-DD-AADF-01A
0 years, female, asian, stage:Stage I, dead, 115 days
6.3
TCGA-DD-AAVP-01A
0 years, male, asian, stage:Stage I, alive, 2752 days
6.2
TCGA-BD-A3ER-01A
0 years, male, white, stage:Stage II, alive, 1115 days
6.2
TCGA-2Y-A9GU-01A
0 years, female, white, stage:Stage I, alive, 1939 days
6.2
TCGA-MR-A520-01A
0 years, male, white, stage:Stage I, alive, 229 days
6.2
TCGA-G3-A5SJ-01A
0 years, male, white, stage:Stage I, alive, 698 days
6.2
TCGA-KR-A7K0-01A
0 years, male, white, stage:Stage I, dead, 65 days
6.1
TCGA-DD-AAEA-01A
0 years, male, asian, stage:Stage I, alive, 575 days
6.1
TCGA-DD-AAVU-01A
0 years, male, asian, stage:Stage II, alive, 2202 days
6.1
TCGA-DD-A1EF-01A
0 years, female, white, stage:Stage I, dead, 394 days
6.0
TCGA-CC-A7II-01A
0 years, male, asian, stage:Stage IIIA, alive, 399 days
6.0
TCGA-G3-A7M8-01A
0 years, male, asian, stage:Stage I, alive, 430 days
6.0
TCGA-DD-A73C-01A
0 years, female, white, stage:Stage IIIA, alive, 701 days
6.0
TCGA-DD-A119-01A
0 years, male, asian, stage:Stage IV, dead, 223 days
6.0
TCGA-DD-AAE7-01A
0 years, male, asian, stage:Stage I, alive, 644 days
5.9
TCGA-DD-AADK-01A
0 years, female, asian, stage:Stage II, alive, 1049 days
5.9
TCGA-DD-AAE3-01A
0 years, male, asian, stage:Stage I, alive, 566 days
5.9
TCGA-WQ-AB4B-01A
0 years, male, white, stage:Stage II, alive, 395 days
5.9
TCGA-DD-A73D-01A
0 years, female, white, stage:Stage II, alive, 693 days
5.9
TCGA-UB-A7MC-01A
0 years, male, white, stage:Stage IIIA, alive, 500 days
5.9
TCGA-K7-A5RG-01A
0 years, male, black or african american, stage:Stage I, alive, 519 days
5.9
TCGA-DD-AADN-01A
0 years, male, asian, stage:Stage I, alive, 898 days
5.9
TCGA-ZS-A9CE-01A
0 years, female, white, stage:Stage II, alive, 1241 days
5.9
TCGA-DD-A39V-01A
0 years, male, white, stage:Stage II, dead, 643 days
5.9
TCGA-DD-A3A1-01A
0 years, male, stage:Stage IIIA, dead, 233 days
5.8
TCGA-QA-A7B7-01A
0 years, male, black or african american, stage:Stage II, alive, 94 days
5.8
TCGA-DD-A4NK-01A
0 years, female, white, stage:Stage IIIA, dead, 1210 days
5.7
TCGA-2Y-A9GX-01A
0 years, male, white, stage:Stage I, alive, 2442 days
5.7
TCGA-DD-AAVX-01A
0 years, male, asian, stage:Stage II, alive, 1718 days
5.7
TCGA-DD-AAEI-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
5.6
TCGA-5C-A9VG-01A
0 years, male, white, stage:Stage II, alive, 328 days
5.6
TCGA-DD-AACA-01A
0 years, male, asian, stage:Stage I, alive, 2301 days
5.6
TCGA-DD-AACZ-01A
0 years, female, asian, stage:Stage I, dead, 171 days
5.6
TCGA-BC-A69I-01A
0 years, male, white, stage:Stage I, alive, 387 days
5.6
TCGA-DD-AAW0-01A
0 years, male, asian, stage:Stage I, alive, 2015 days
5.6
TCGA-T1-A6J8-01A
0 years, male, white, stage:'--, alive, 23 days
5.6
TCGA-BC-A110-01A
0 years, female, black or african american, stage:'--, dead, 2116 days
5.6
TCGA-DD-AAC8-01A
0 years, male, asian, stage:Stage I, dead, 16 days
5.5
TCGA-BC-A10X-01A
0 years, female, white, stage:Stage IIIA, dead, 770 days
5.5
TCGA-DD-AAVW-01A
0 years, male, asian, stage:Stage I, alive, 2317 days
5.5
TCGA-DD-AAEK-01A
0 years, male, asian, stage:Stage II, alive, 1067 days
5.5
TCGA-DD-A1EB-01A
0 years, female, stage:Stage I, alive, 2017 days
5.4
TCGA-ZS-A9CG-01A
0 years, male, white, stage:Stage II, alive, 341 days
5.3
TCGA-DD-A116-01A
0 years, male, asian, stage:Stage IIIA, dead, 1622 days
5.3
TCGA-UB-AA0V-01A
0 years, female, white, stage:Stage I, alive, 314 days
5.2
TCGA-DD-AADV-01A
0 years, male, asian, stage:Stage I, alive, 574 days
5.2
TCGA-RC-A6M4-01A
0 years, female, white, stage:Stage IIIA, alive, 22 days
5.2
TCGA-2Y-A9HA-01A
0 years, male, white, stage:Stage II, dead, 36 days
5.2
TCGA-ZP-A9D2-01A
0 years, male, white, stage:'--, dead, 765 days
5.2
TCGA-DD-A4NL-01A
0 years, male, white, stage:Stage I, alive, 1711 days
5.2
TCGA-CC-A7IE-01A
0 years, male, asian, stage:Stage IIIA, dead, 217 days
5.1
TCGA-DD-AACO-01A
0 years, male, asian, stage:Stage I, alive, 1876 days
5.1
TCGA-BC-A10U-01A
0 years, male, white, stage:'--, dead, 837 days
5.1
TCGA-ZP-A9D0-01A
0 years, female, black or african american, stage:'--, alive, 1091 days
5.0
TCGA-CC-A9FS-01A
0 years, male, asian, stage:Stage II, alive, 211 days
5.0
TCGA-CC-A123-01A
0 years, female, asian, stage:Stage IIIA, alive, 219 days
4.9
TCGA-EP-A26S-01A
0 years, male, white, stage:Stage I, alive, 608 days
4.9
TCGA-DD-AACG-01A
0 years, male, asian, stage:Stage II, dead, 469 days
4.9
TCGA-DD-AAD6-01A
0 years, male, asian, stage:Stage IIIA, alive, 672 days
4.8
TCGA-G3-A7M5-01A
0 years, male, asian, stage:Stage I, alive, 447 days
4.8
TCGA-DD-A3A6-01A
0 years, female, white, stage:Stage II, dead, 3258 days
4.8
TCGA-2Y-A9GZ-01A
0 years, female, white, stage:Stage II, dead, 848 days
4.8
TCGA-DD-A4NI-01A
0 years, male, white, stage:Stage II, alive, 816 days
4.7
TCGA-BC-A10T-01A
0 years, male, white, stage:'--, dead, 837 days
4.7
TCGA-DD-AADU-01A
0 years, male, asian, stage:Stage II, alive, 554 days
4.7
TCGA-DD-A11B-01A
0 years, male, white, stage:Stage I, dead, 14 days
4.7
TCGA-G3-A3CJ-01A
0 years, male, american indian or alaska native, stage:Stage II, alive, 594 days
4.6
TCGA-DD-A4NF-01A
0 years, male, white, stage:Stage I, alive, 942 days
4.6
TCGA-DD-AADR-01A
0 years, male, asian, stage:Stage I, alive, 2028 days
4.5
TCGA-DD-A3A7-01A
0 years, male, stage:Stage IIIB, dead, 419 days
4.4
TCGA-G3-A25Z-01A
0 years, male, asian, stage:Stage I, alive, 655 days
4.4
TCGA-ED-A7XP-01A
0 years, female, asian, stage:Stage II, alive, 400 days
4.4
TCGA-DD-AADM-01A
0 years, male, asian, stage:Stage II, dead, 12 days
4.4
TCGA-DD-AAED-01A
0 years, male, asian, stage:Stage I, alive, 763 days
4.3
TCGA-2Y-A9H1-01A
0 years, male, white, stage:Stage I, dead, 1229 days
4.3
TCGA-NI-A8LF-01A
0 years, male, white, stage:Stage I, alive, 799 days
4.3
TCGA-DD-AAEB-01A
0 years, male, asian, stage:Stage I, alive, 478 days
4.2
TCGA-WX-AA46-01A
0 years, male, white, stage:Stage II, alive, 756 days
4.2
TCGA-CC-5259-01A
0 years, female, asian, stage:Stage IIIC, alive, 250 days
4.0
TCGA-DD-AAE4-01A
0 years, female, asian, stage:Stage I, alive, 608 days
3.9
TCGA-DD-A1ED-01A
0 years, male, white, stage:Stage I, alive, 2301 days
3.8
TCGA-NI-A4U2-01A
0 years, male, white, stage:Stage IIIA, dead, 1791 days
3.8
TCGA-RC-A7SB-01A
0 years, male, asian, stage:Stage II, alive, 588 days
3.8
TCGA-CC-5258-01A
0 years, male, asian, stage:Stage II, dead, 129 days
3.7
TCGA-ZP-A9D4-01A
0 years, female, white, stage:'--, alive, 395 days
3.7
TCGA-2Y-A9H9-01A
0 years, male, white, stage:Stage I, alive, 697 days
3.7
TCGA-RC-A7SK-01A
0 years, male, asian, stage:Stage I, alive, 472 days
3.6
TCGA-DD-AADS-01A
0 years, male, asian, stage:Stage I, alive, 474 days
3.6
TCGA-ED-A7PZ-01A
0 years, male, asian, stage:Stage II, alive, 6 days
3.6
TCGA-DD-AAC9-01A
0 years, male, asian, stage:Stage I, alive, 347 days
3.6
TCGA-DD-A3A2-01A
0 years, female, white, stage:Stage I, dead, 2131 days
3.5
TCGA-DD-A11C-01A
0 years, male, white, stage:Stage I, alive, 662 days
3.4
TCGA-G3-A5SK-01A
0 years, male, white, stage:Stage I, alive, 744 days
3.3
TCGA-DD-AAW1-01A
0 years, male, asian, stage:Stage IIIA, alive, 1989 days
3.3
TCGA-DD-AACE-01A
0 years, male, asian, stage:Stage I, alive, 2184 days
3.1
TCGA-FV-A496-01A
0 years, female, white, stage:Stage I, alive, 10 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
TOR2A is not prognostic in Liver Hepatocellular Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
6.8
Number of samples
231
Samples
Sample
Description
TPM
DO23525
0 years, male, NA, stage:4, alive, 1050 days
18.5
DO45259
0 years, male, NA, stage:3, alive, 330 days
16.1
DO45211
0 years, male, NA, stage:3, alive, 240 days
16.0
DO45299
0 years, female, NA, stage:1, alive, 1440 days
15.2
DO45307
0 years, female, NA, stage:4, dead, 240 days
14.5
DO50809
0 years, male, NA, stage:3, dead, 720 days
14.5
DO48717
0 years, male, NA, stage:4, dead, 180 days
14.5
DO23528
0 years, female, NA, stage:2, alive, 1020 days
14.2
DO45217
0 years, female, NA, stage:3, dead, 270 days
14.1
DO45131
0 years, male, NA, stage:4, dead, 360 days
13.7
DO50844
0 years, male, NA, stage:4, alive, 300 days
13.3
DO23515
0 years, male, NA, stage:2, alive, 1230 days
13.2
DO45275
0 years, male, NA, stage:3, dead, 10 days
13.2
DO45301
0 years, male, NA, stage:2, dead, 1440 days
13.0
DO45209
0 years, male, NA, stage:4, alive, 1350 days
12.7
DO48751
0 years, male, NA, stage:2, dead, 480 days
12.3
DO48747
0 years, male, NA, stage:3, alive, 540 days
11.3
DO45121
0 years, male, NA, stage:3, alive, 1530 days
11.1
DO48741
0 years, male, NA, stage:3, alive, 240 days
11.1
DO50855
0 years, male, NA, stage:2, alive, 570 days
10.9
DO23519
0 years, male, NA, stage:3, alive, 630 days
10.8
DO45287
0 years, male, NA, stage:1, alive, 390 days
10.8
DO23511
0 years, female, NA, stage:3, dead, 180 days
10.7
DO23547
0 years, male, NA, stage:1, alive, 1020 days
10.7
DO23523
0 years, male, NA, stage:3, alive, 1080 days
10.6
DO45277
0 years, male, NA, stage:3, alive, 600 days
10.4
DO45249
0 years, male, NA, stage:1, alive, 630 days
10.3
DO48737
0 years, male, NA, stage:1, alive, 720 days
10.3
DO45273
0 years, male, NA, stage:2, alive, 480 days
10.0
DO23508
0 years, female, NA, stage:2, alive, 390 days
10.0
DO50816
0 years, male, NA, stage:2, alive, 390 days
9.9
DO45153
0 years, female, NA, stage:2, alive, 1380 days
9.8
DO23532
0 years, female, NA, stage:1, alive, 960 days
9.6
DO45225
0 years, male, NA, stage:1, alive, 1050 days
9.5
DO50806
0 years, male, NA, stage:4, alive, 540 days
9.5
DO50840
0 years, male, NA, stage:2, alive, 330 days
9.3
DO45191
0 years, female, NA, stage:2, alive, 1200 days
9.2
DO45269
0 years, male, NA, stage:3, alive, 750 days
9.2
DO23540
0 years, male, NA, stage:1, alive, 750 days
9.2
DO48719
0 years, male, NA, stage:2, alive, 690 days
9.2
DO45237
0 years, male, NA, stage:2, alive, 900 days
9.2
DO50811
0 years, male, NA, stage:1, alive, 450 days
9.1
DO48736
0 years, female, NA, stage:1, alive, 600 days
9.0
DO23518
0 years, male, NA, stage:2, alive, 1320 days
8.8
DO48700
0 years, female, NA, stage:2, alive, 810 days
8.8
DO45263
0 years, male, NA, stage:3, dead, 270 days
8.7
DO45305
0 years, male, NA, stage:4, alive, 300 days
8.6
DO45092
0 years, male, NA, stage:4, dead, 1200 days
8.5
DO50799
0 years, female, NA, stage:2, alive, 540 days
8.5
DO45159
0 years, male, NA, stage:3, alive, 1470 days
8.5
DO45267
0 years, male, NA, stage:3, dead, 570 days
8.4
DO45165
0 years, male, NA, stage:2, alive, 690 days
8.4
DO23516
0 years, male, NA, stage:3, dead, 20 days
8.0
DO48697
0 years, female, NA, stage:2, dead, 810 days
8.0
DO50805
0 years, male, NA, stage:2, alive, 690 days
8.0
DO45243
0 years, female, NA, stage:3, alive, 930 days
8.0
DO45227
0 years, female, NA, stage:2, alive, 1020 days
7.9
DO45149
0 years, female, NA, stage:2, alive, 1260 days
7.9
DO45241
0 years, male, NA, stage:1, alive, 1080 days
7.8
DO45155
0 years, male, NA, stage:2, alive, 2160 days
7.8
DO48715
0 years, female, NA, stage:2, dead, 690 days
7.7
DO48712
0 years, male, NA, stage:2, alive, 810 days
7.6
DO23537
0 years, male, NA, stage:2, dead, 900 days
7.6
DO45127
0 years, male, NA, stage:3, dead, 420 days
7.6
DO45099
0 years, male, NA, stage:3, alive, 1590 days
7.5
DO50839
0 years, female, NA, stage:3, alive, 330 days
7.5
DO45139
0 years, male, NA, stage:3, alive, 1320 days
7.4
DO45095
0 years, male, NA, stage:2, alive, 1620 days
7.4
DO23526
0 years, male, NA, stage:3, alive, 1050 days
7.4
DO48701
0 years, male, NA, stage:2, alive, 780 days
7.4
DO50829
0 years, male, NA, stage:3, alive, 570 days
7.4
DO48716
0 years, male, NA, stage:2, alive, 720 days
7.4
DO48730
0 years, female, NA, stage:2, alive, 630 days
7.4
DO48704
0 years, female, NA, stage:3, alive, 750 days
7.3
DO48682
0 years, female, NA, stage:3, dead, 120 days
7.3
DO23535
0 years, male, NA, stage:1, alive, 960 days
7.3
DO45207
0 years, male, NA, stage:1, alive, 1050 days
7.2
DO50822
0 years, male, NA, stage:2, alive, 510 days
7.2
DO48721
0 years, female, NA, stage:1, alive, 900 days
7.2
DO45183
0 years, female, NA, stage:2, dead, 570 days
7.2
DO45097
0 years, male, NA, stage:3, alive, 1620 days
7.1
DO23524
0 years, female, NA, stage:2, alive, 1050 days
7.0
DO23533
0 years, male, NA, stage:2, alive, 900 days
7.0
DO45143
0 years, male, NA, stage:3, alive, 1290 days
7.0
DO227801
0 years, female, NA, stage:1, alive, 660 days
7.0
DO45115
0 years, male, NA, stage:2, alive, 840 days
7.0
DO45253
0 years, male, NA, stage:2, alive, 870 days
6.9
DO23510
0 years, female, NA, stage:2, alive, 870 days
6.9
DO23552
0 years, female, NA, stage:1, alive, 810 days
6.9
DO50785
0 years, male, NA, stage:4, dead, 90 days
6.9
DO50845
0 years, male, NA, stage:3, alive, 210 days
6.9
DO23545
0 years, male, NA, stage:2, dead, 570 days
6.9
DO48681
0 years, male, NA, stage:2, alive, 900 days
6.9
DO45235
0 years, female, NA, stage:1, alive, 900 days
6.8
DO48728
0 years, female, NA, stage:2, alive, 150 days
6.8
DO48759
0 years, male, NA, stage:3, alive, 720 days
6.7
DO45161
0 years, male, NA, stage:2, dead, 540 days
6.6
DO45303
0 years, female, NA, stage:3, alive, 990 days
6.6
DO45093
0 years, male, NA, stage:2, dead, 720 days
6.5
DO50776
0 years, male, NA, stage:1, alive, 690 days
6.5
DO45107
0 years, female, NA, stage:2, alive, 1710 days
6.5
DO50850
0 years, male, NA, stage:3, alive, 720 days
6.4
DO45255
0 years, male, NA, stage:3, alive, 720 days
6.4
DO50793
0 years, male, NA, stage:4, alive, 540 days
6.4
DO23539
0 years, male, NA, stage:1, alive, 1110 days
6.4
DO50791
0 years, female, NA, stage:1, dead, 480 days
6.4
DO45283
0 years, male, NA, stage:3, alive, 510 days
6.4
DO45231
0 years, male, NA, stage:2, alive, 930 days
6.4
DO45094
0 years, male, NA, stage:3, alive, 1650 days
6.4
DO45257
0 years, male, NA, stage:3, alive, 810 days
6.4
DO45101
0 years, male, NA, stage:2, alive, 1680 days
6.4
DO23513
0 years, male, NA, stage:3, alive, 1200 days
6.4
DO23521
0 years, male, NA, stage:3, alive, 1110 days
6.4
DO45145
0 years, male, NA, stage:3, dead, 60 days
6.3
DO50802
0 years, male, NA, stage:2, alive, 930 days
6.3
DO45096
0 years, male, NA, stage:2, dead, 1290 days
6.3
DO45239
0 years, male, NA, stage:2, alive, 870 days
6.2
DO45213
0 years, male, NA, stage:1, alive, 1200 days
6.2
DO23529
0 years, male, NA, stage:4, alive, 930 days
6.2
DO48720
0 years, female, NA, stage:2, alive, 570 days
6.1
DO45163
0 years, male, NA, stage:2, alive, 960 days
6.0
DO50804
0 years, male, NA, stage:2, alive, 720 days
6.0
DO45109
0 years, male, NA, stage:2, alive, 1590 days
6.0
DO50817
0 years, male, NA, stage:2, alive, 390 days
6.0
DO50818
0 years, male, NA, stage:2, alive, 510 days
6.0
DO50813
0 years, male, NA, stage:2, alive, 420 days
6.0
DO45157
0 years, male, NA, stage:2, alive, 1980 days
6.0
DO45171
0 years, male, NA, stage:3, alive, 600 days
6.0
DO23549
0 years, male, NA, stage:3, alive, 990 days
5.9
DO45197
0 years, male, NA, stage:2, alive, 1170 days
5.9
DO48725
0 years, male, NA, stage:1, alive, 780 days
5.9
DO50803
0 years, female, NA, stage:1, alive, 540 days
5.9
DO23542
0 years, male, NA, stage:3, alive, 960 days
5.9
DO50787
0 years, male, NA, stage:3, alive, 480 days
5.8
DO48743
0 years, female, NA, stage:2, alive, 570 days
5.8
DO50819
0 years, female, NA, stage:2, alive, 510 days
5.8
DO45103
0 years, male, NA, stage:3, alive, 450 days
5.8
DO50778
0 years, male, NA, stage:4, alive, 630 days
5.8
DO50825
0 years, male, NA, stage:2, alive, 390 days
5.8
DO45201
0 years, male, NA, stage:1, alive, 900 days
5.8
DO50814
0 years, male, NA, stage:3, alive, 420 days
5.7
DO23530
0 years, male, NA, stage:4, dead, 180 days
5.7
DO45215
0 years, male, NA, stage:2, alive, 1170 days
5.7
DO45233
0 years, male, NA, stage:3, alive, 900 days
5.6
DO50800
0 years, male, NA, stage:2, alive, 510 days
5.6
DO45205
0 years, female, NA, stage:2, dead, 90 days
5.6
DO50783
0 years, male, NA, stage:3, alive, 480 days
5.6
DO48757
0 years, female, NA, stage:3, alive, 480 days
5.6
DO45135
0 years, male, NA, stage:1, alive, 1410 days
5.6
DO45193
0 years, female, NA, stage:4, dead, 120 days
5.5
DO45177
0 years, female, NA, stage:3, alive, 1260 days
5.5
DO50832
0 years, male, NA, stage:3, alive, 90 days
5.5
DO48732
0 years, male, NA, stage:3, alive, 630 days
5.4
DO45141
0 years, male, NA, stage:2, alive, 1320 days
5.4
DO48679
0 years, male, NA, stage:2, alive, 1200 days
5.4
DO45199
0 years, female, NA, stage:2, alive, 1350 days
5.4
DO45265
0 years, male, NA, stage:3, alive, 1020 days
5.4
DO23534
0 years, male, NA, stage:2, alive, 840 days
5.4
DO23546
0 years, male, NA, stage:2, alive, 1050 days
5.3
DO50807
0 years, male, NA, stage:1, alive, 540 days
5.3
DO23514
0 years, male, NA, stage:2, alive, 1290 days
5.3
DO48733
0 years, male, NA, stage:2, alive, 600 days
5.1
DO48693
0 years, male, NA, stage:2, alive, 900 days
5.1
DO45179
0 years, female, NA, stage:2, alive, 600 days
5.1
DO48695
0 years, male, NA, stage:2, alive, 720 days
5.0
DO45119
0 years, male, NA, stage:3, dead, 510 days
5.0
DO45281
0 years, male, NA, stage:4, alive, 750 days
5.0
DO45173
0 years, male, NA, stage:3, alive, 1170 days
5.0
DO23527
0 years, male, NA, stage:1, alive, 1050 days
5.0
DO45125
0 years, male, NA, stage:3, alive, 1680 days
5.0
DO50820
0 years, female, NA, stage:3, alive, 510 days
4.9
DO48706
0 years, male, NA, stage:2, alive, 870 days
4.9
DO45229
0 years, male, NA, stage:1, alive, 990 days
4.8
DO45181
0 years, female, NA, stage:2, alive, 1200 days
4.8
DO48761
0 years, male, NA, stage:2, alive, 870 days
4.8
DO50815
0 years, male, NA, stage:3, alive, 150 days
4.8
DO45203
0 years, female, NA, stage:2, alive, 1170 days
4.8
DO45187
0 years, female, NA, stage:1, alive, 1260 days
4.8
DO50798
0 years, male, NA, stage:3, dead, 30 days
4.7
DO45185
0 years, male, NA, stage:2, alive, 600 days
4.7
DO45251
0 years, female, NA, stage:2, alive, 900 days
4.7
DO48746
0 years, male, NA, stage:3, alive, 570 days
4.7
DO45221
0 years, female, NA, stage:4, dead, 390 days
4.6
DO45133
0 years, male, NA, stage:3, dead, 660 days
4.6
DO45169
0 years, male, NA, stage:3, alive, 1350 days
4.6
DO45091
0 years, male, NA, stage:2, dead, 1320 days
4.5
DO45123
0 years, female, NA, stage:2, dead, 570 days
4.5
DO50859
0 years, male, NA, stage:2, alive, 180 days
4.5
DO23512
0 years, male, NA, stage:1, alive, 1260 days
4.5
DO45219
0 years, male, NA, stage:2, alive, 1080 days
4.5
DO45105
0 years, male, NA, stage:1, alive, 1680 days
4.5
DO45117
0 years, female, NA, stage:2, dead, 1110 days
4.5
DO45245
0 years, female, NA, stage:2, dead, 240 days
4.5
DO45167
0 years, male, NA, stage:2, dead, 1440 days
4.4
DO48674
0 years, male, NA, stage:2, alive, 1260 days
4.4
DO23543
0 years, male, NA, stage:2, alive, 1020 days
4.4
DO45113
0 years, male, NA, stage:3, alive, 1560 days
4.3
DO45261
0 years, male, NA, stage:3, alive, 990 days
4.3
DO48672
0 years, male, NA, stage:2, alive, 450 days
4.2
DO48760
0 years, female, NA, stage:2, alive, 690 days
4.2
DO45297
0 years, female, NA, stage:4, dead, 1260 days
4.1
DO48723
0 years, male, NA, stage:1, alive, 600 days
4.1
DO50774
0 years, female, NA, stage:2, alive, 720 days
4.1
DO23544
0 years, male, NA, stage:2, alive, 960 days
4.1
DO45137
0 years, male, NA, stage:1, alive, 1320 days
4.1
DO45285
0 years, male, NA, stage:3, alive, 480 days
4.0
DO48742
0 years, male, NA, stage:2, alive, 600 days
3.8
DO50857
0 years, male, NA, stage:2, alive, 210 days
3.8
DO50808
0 years, male, NA, stage:2, alive, 570 days
3.7
DO45289
0 years, female, NA, stage:3, alive, 360 days
3.7
DO23548
0 years, female, NA, stage:1, alive, 840 days
3.6
DO45279
0 years, male, NA, stage:3, alive, 1290 days
3.6
DO227643
0 years, male, NA, stage:2, alive, 1260 days
3.6
DO45223
0 years, male, NA, stage:4, alive, 1020 days
3.5
DO45189
0 years, female, NA, stage:2, alive, 1200 days
3.5
DO48677
0 years, male, NA, stage:3, alive, 1140 days
3.5
DO23541
0 years, male, NA, stage:2, alive, 930 days
3.5
DO50789
0 years, female, NA, stage:2, alive, 570 days
3.5
DO45247
0 years, female, NA, stage:2, alive, 210 days
3.5
DO23531
0 years, female, NA, stage:3, alive, 900 days
3.4
DO23550
0 years, male, NA, stage:1, alive, 990 days
3.2
DO23509
0 years, male, NA, stage:3, dead, 780 days
2.9
DO23517
0 years, male, NA, stage:2, alive, 1200 days
2.9
DO45129
0 years, male, NA, stage:3, alive, 1470 days
2.9
DO23538
0 years, male, NA, stage:2, alive, 450 days
2.9
DO45195
0 years, male, NA, stage:1, alive, 390 days
2.8
DO23536
0 years, male, NA, stage:2, alive, 930 days
2.8
DO45175
0 years, male, NA, stage:2, alive, 1140 days
2.5
DO23551
0 years, male, NA, stage:3, dead, 150 days
2.5
DO48727
0 years, female, NA, stage:2, dead, 390 days
2.2
DO45111
0 years, male, NA, stage:2, alive, 1590 days
1.3
Show allShow less
LIVER HEPATOCELLULAR CARCINOMA - Protein relative expression (CPTAC)
Number of samples
330
Samples
Sample ID
Sample type
nRPX
937
Tumor
0.9
277
Tumor
0.8
465
Tumor
0.8
392
Normal
0.8
695
Tumor
0.8
755
Tumor
0.7
857
Tumor
0.7
257
Tumor
0.7
953
Tumor
0.6
342
Normal
0.6
355
Tumor
0.6
922
Normal
0.6
1028
Normal
0.6
744
Normal
0.6
124
Normal
0.6
954
Normal
0.6
672
Normal
0.6
376
Normal
0.6
358
Normal
0.6
1043
Tumor
0.6
663
Tumor
0.6
568
Normal
0.6
267
Tumor
0.6
446
Normal
0.5
641
Tumor
0.5
351
Tumor
0.5
445
Tumor
0.5
354
Normal
0.5
344
Normal
0.5
423
Tumor
0.5
926
Normal
0.5
411
Tumor
0.5
558
Normal
0.5
435
Tumor
0.5
352
Normal
0.5
686
Normal
0.5
384
Normal
0.5
161
Tumor
0.4
1026
Normal
0.4
388
Normal
0.4
636
Normal
0.4
426
Normal
0.4
262
Normal
0.4
865
Tumor
0.4
128
Normal
0.4
497
Tumor
0.4
662
Normal
0.4
132
Normal
0.4
341
Tumor
0.4
368
Normal
0.4
224
Normal
0.4
195
Tumor
0.4
1046
Normal
0.4
138
Normal
0.4
414
Normal
0.4
1022
Normal
0.4
696
Normal
0.4
112
Tumor
0.4
984
Normal
0.4
488
Normal
0.4
572
Normal
0.4
125
Tumor
0.4
232
Normal
0.4
1032
Normal
0.4
394
Normal
0.4
466
Normal
0.4
332
Normal
0.3
722
Normal
0.3
955
Tumor
0.3
114
Normal
0.3
524
Normal
0.3
284
Normal
0.3
815
Tumor
0.3
862
Normal
0.3
313
Tumor
0.3
742
Normal
0.3
357
Tumor
0.3
353
Tumor
0.3
491
Tumor
0.3
258
Normal
0.3
557
Tumor
0.3
448
Normal
0.3
196
Normal
0.3
126
Normal
0.3
186
Normal
0.3
298
Normal
0.3
142
Normal
0.3
366
Normal
0.3
698
Normal
0.3
868
Normal
0.3
468
Normal
0.3
864
Normal
0.3
866
Normal
0.3
642
Normal
0.3
648
Normal
0.3
916
Normal
0.3
738
Normal
0.3
1014
Normal
0.3
918
Normal
0.3
664
Normal
0.3
343
Tumor
0.3
111
Normal
0.3
214
Normal
0.3
915
Tumor
0.3
536
Normal
0.3
714
Normal
0.3
272
Normal
0.3
452
Normal
0.3
447
Tumor
0.3
861
Tumor
0.3
628
Normal
0.3
146
Normal
0.3
914
Normal
0.3
666
Normal
0.3
912
Normal
0.3
268
Normal
0.3
978
Normal
0.2
135
Tumor
0.2
383
Tumor
0.2
618
Normal
0.2
218
Normal
0.2
944
Normal
0.2
434
Normal
0.2
1044
Normal
0.2
924
Normal
0.2
362
Normal
0.2
571
Tumor
0.2
365
Tumor
0.2
396
Normal
0.2
538
Normal
0.2
286
Normal
0.2
436
Normal
0.2
493
Tumor
0.2
136
Normal
0.2
464
Normal
0.2
1016
Normal
0.2
721
Tumor
0.2
913
Tumor
0.2
723
Tumor
0.2
444
Normal
0.2
976
Normal
0.2
471
Tumor
0.2
228
Normal
0.2
494
Normal
0.2
356
Normal
0.2
145
Tumor
0.2
818
Normal
0.2
671
Tumor
0.2
528
Normal
0.2
422
Normal
0.2
778
Normal
0.2
213
Tumor
0.2
713
Tumor
0.2
271
Tumor
0.2
172
Normal
0.2
526
Normal
0.2
1013
Tumor
0.2
424
Normal
0.1
217
Tumor
0.1
863
Tumor
0.1
647
Tumor
0.1
162
Normal
0.1
523
Tumor
0.1
564
Normal
0.1
492
Normal
0.1
966
Normal
0.1
878
Normal
0.1
192
Normal
0.1
147
Tumor
0.1
627
Tumor
0.1
187
Tumor
0.1
858
Normal
0.1
432
Normal
0.1
716
Normal
0.1
361
Tumor
0.1
968
Normal
0.1
786
Normal
0.1
484
Normal
0.1
148
Normal
0.1
498
Normal
0.1
785
Tumor
0.1
478
Normal
0.1
616
Normal
0.1
852
Normal
0.1
824
Normal
0.1
314
Normal
0.1
943
Tumor
0.1
375
Tumor
0.1
127
Tumor
0.1
661
Tumor
0.1
278
Normal
0.1
921
Tumor
0.0
191
Tumor
0.0
964
Normal
0.0
463
Tumor
0.0
756
Normal
0.0
1015
Tumor
0.0
386
Normal
0.0
513
Tumor
0.0
982
Normal
0.0
261
Tumor
0.0
728
Normal
0.0
428
Normal
0.0
877
Tumor
0.0
416
Normal
0.0
574
Normal
0.0
222
Normal
0.0
952
Normal
0.0
462
Normal
0.0
412
Normal
0.0
311
Tumor
0.0
1041
Tumor
0.0
873
Tumor
0.0
746
Normal
0.0
328
Normal
0.0
958
Normal
0.0
212
Normal
0.0
938
Normal
0.0
518
Normal
0.0
188
Normal
0.0
777
Tumor
0.0
882
Normal
0.0
816
Normal
0.0
981
Tumor
0.0
113
Tumor
0.0
1045
Tumor
0.0
635
Tumor
0.0
851
Tumor
0.0
141
Tumor
-0.1
745
Tumor
-0.1
433
Tumor
-0.1
312
Normal
-0.1
467
Tumor
-0.1
364
Normal
-0.1
533
Tumor
-0.1
884
Normal
-0.1
741
Tumor
-0.1
573
Tumor
-0.1
456
Normal
-0.1
223
Tumor
-0.1
617
Tumor
-0.1
956
Normal
-0.1
977
Tumor
-0.1
514
Normal
-0.1
874
Normal
-0.1
473
Tumor
-0.1
554
Normal
-0.1
221
Tumor
-0.1
923
Tumor
-0.1
867
Tumor
-0.1
911
Tumor
-0.1
1031
Tumor
-0.1
983
Tumor
-0.1
477
Tumor
-0.1
395
Tumor
-0.1
171
Tumor
-0.1
546
Normal
-0.2
482
Normal
-0.2
227
Tumor
-0.2
123
Tumor
-0.2
814
Normal
-0.2
393
Tumor
-0.2
283
Tumor
-0.2
917
Tumor
-0.2
737
Tumor
-0.2
297
Tumor
-0.2
1042
Normal
-0.2
231
Tumor
-0.2
615
Tumor
-0.2
534
Normal
-0.2
131
Tumor
-0.2
516
Normal
-0.2
817
Tumor
-0.3
455
Tumor
-0.3
823
Tumor
-0.3
427
Tumor
-0.3
472
Normal
-0.3
385
Tumor
-0.3
137
Tumor
-0.3
925
Tumor
-0.3
724
Normal
-0.3
957
Tumor
-0.3
487
Tumor
-0.3
331
Tumor
-0.3
665
Tumor
-0.3
883
Tumor
-0.3
975
Tumor
-0.3
563
Tumor
-0.3
391
Tumor
-0.3
697
Tumor
-0.3
1021
Tumor
-0.3
881
Tumor
-0.4
474
Normal
-0.4
185
Tumor
-0.4
1027
Tumor
-0.4
963
Tumor
-0.4
327
Tumor
-0.4
413
Tumor
-0.4
415
Tumor
-0.4
567
Tumor
-0.4
527
Tumor
-0.4
421
Tumor
-0.4
367
Tumor
-0.5
727
Tumor
-0.5
461
Tumor
-0.5
813
Tumor
-0.5
451
Tumor
-0.5
211
Tumor
-0.5
431
Tumor
-0.5
425
Tumor
-0.5
525
Tumor
-0.5
967
Tumor
-0.5
285
Tumor
-0.6
715
Tumor
-0.6
481
Tumor
-0.6
553
Tumor
-0.6
515
Tumor
-0.6
1025
Tumor
-0.6
535
Tumor
-0.6
443
Tumor
-0.6
685
Tumor
-0.7
545
Tumor
-0.7
483
Tumor
-0.8
517
Tumor
-0.8
743
Tumor
-0.8
951
Tumor
-0.8
363
Tumor
-0.9
965
Tumor
-0.9
387
Tumor
-1.0
537
Tumor
-1.0
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LIVER CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
