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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
FCN2 is not prognostic in Liver Hepatocellular Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
2.4
Number of samples
362
Samples
Sample
Description
TPM
TCGA-BC-A110-01A
0 years, female, black or african american, stage:'--, dead, 2116 days
57.2
TCGA-BC-A10X-01A
0 years, female, white, stage:Stage IIIA, dead, 770 days
55.6
TCGA-DD-A4NS-01A
0 years, female, white, stage:Stage I, dead, 2456 days
43.2
TCGA-ED-A627-01A
0 years, male, white, stage:Stage I, alive, 423 days
42.2
TCGA-K7-A5RF-01A
0 years, male, white, stage:Stage I, alive, 631 days
41.1
TCGA-WX-AA46-01A
0 years, male, white, stage:Stage II, alive, 756 days
33.4
TCGA-ED-A7XO-01A
0 years, male, asian, stage:Stage IIIA, alive, 427 days
28.5
TCGA-G3-A5SK-01A
0 years, male, white, stage:Stage I, alive, 744 days
27.7
TCGA-ZS-A9CF-01A
0 years, male, white, stage:Stage II, alive, 2412 days
26.2
TCGA-DD-A3A2-01A
0 years, female, white, stage:Stage I, dead, 2131 days
17.4
TCGA-ED-A97K-01A
0 years, male, asian, stage:Stage IIIA, alive, 6 days
16.3
TCGA-5R-AAAM-01A
0 years, female, white, stage:Stage II, dead, 46 days
16.2
TCGA-2Y-A9GZ-01A
0 years, female, white, stage:Stage II, dead, 848 days
13.8
TCGA-XR-A8TD-01A
0 years, female, white, stage:Stage IIIB, alive, 1030 days
13.2
TCGA-DD-A4NP-01A
0 years, male, white, stage:Stage I, alive, 3308 days
12.3
TCGA-DD-A4NV-01A
0 years, male, white, stage:Stage IIIA, alive, 2398 days
11.7
TCGA-DD-A1EA-01A
0 years, male, asian, stage:Stage II, alive, 2415 days
11.6
TCGA-UB-AA0U-01A
0 years, male, white, stage:Stage II, alive, 327 days
11.5
TCGA-UB-AA0V-01A
0 years, female, white, stage:Stage I, alive, 314 days
11.0
TCGA-BC-A10U-01A
0 years, male, white, stage:'--, dead, 837 days
10.9
TCGA-ZP-A9CY-01A
0 years, female, white, stage:'--, alive, 782 days
10.1
TCGA-DD-AACT-01A
0 years, female, asian, stage:Stage I, alive, 1562 days
9.8
TCGA-DD-A1EK-01A
0 years, female, white, stage:Stage IVB, dead, 558 days
9.0
TCGA-2Y-A9GV-01A
0 years, female, white, stage:Stage I, dead, 2532 days
8.7
TCGA-DD-AACN-01A
0 years, male, asian, stage:Stage I, alive, 1302 days
8.3
TCGA-UB-A7MD-01A
0 years, male, black or african american, stage:Stage I, dead, 52 days
8.2
TCGA-DD-AAE2-01A
0 years, male, asian, stage:Stage I, alive, 638 days
8.0
TCGA-DD-AACD-01A
0 years, male, asian, stage:Stage I, dead, 381 days
7.3
TCGA-DD-A1ED-01A
0 years, male, white, stage:Stage I, alive, 2301 days
7.1
TCGA-ED-A4XI-01A
0 years, male, asian, stage:Stage II, alive, 819 days
7.0
TCGA-BC-A5W4-01A
0 years, male, white, stage:Stage IIIA, dead, 547 days
6.7
TCGA-DD-AADF-01A
0 years, female, asian, stage:Stage I, dead, 115 days
6.7
TCGA-DD-AADG-01A
0 years, male, asian, stage:Stage IIIA, alive, 1145 days
6.5
TCGA-MI-A75E-01A
0 years, male, white, stage:Stage IIIC, alive, 507 days
6.4
TCGA-DD-A4NI-01A
0 years, male, white, stage:Stage II, alive, 816 days
6.3
TCGA-DD-A4ND-01A
0 years, female, white, stage:Stage I, alive, 2746 days
6.1
TCGA-BC-A10T-01A
0 years, male, white, stage:'--, dead, 837 days
5.9
TCGA-XR-A8TE-01A
0 years, male, white, stage:Stage IIIA, alive, 925 days
5.3
TCGA-CC-A9FS-01A
0 years, male, asian, stage:Stage II, alive, 211 days
5.0
TCGA-DD-A1EI-01A
0 years, male, asian, stage:Stage I, alive, 183 days
4.9
TCGA-G3-AAUZ-01A
0 years, male, stage:Stage I, alive, 480 days
4.8
TCGA-2Y-A9HA-01A
0 years, male, white, stage:Stage II, dead, 36 days
4.8
TCGA-DD-AACC-01A
0 years, male, asian, stage:Stage I, dead, 1685 days
4.8
TCGA-YA-A8S7-01A
0 years, male, white, stage:Stage IIIA, dead, 412 days
4.7
TCGA-2Y-A9GX-01A
0 years, male, white, stage:Stage I, alive, 2442 days
4.6
TCGA-RC-A7SB-01A
0 years, male, asian, stage:Stage II, alive, 588 days
4.5
TCGA-MI-A75G-01A
0 years, male, white, stage:Stage II, alive, 698 days
4.5
TCGA-DD-AACV-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
4.3
TCGA-CC-A3MB-01A
0 years, male, asian, stage:Stage IIIA, dead, 315 days
4.2
TCGA-G3-A25U-01A
0 years, female, asian, stage:Stage I, alive, 1636 days
4.2
TCGA-DD-A73E-01A
0 years, male, white, stage:Stage I, alive, 44 days
4.2
TCGA-DD-AAD1-01A
0 years, female, asian, stage:Stage I, alive, 564 days
4.1
TCGA-WQ-A9G7-01A
0 years, female, white, stage:'--, alive, 30 days
4.0
TCGA-G3-A25V-01A
0 years, male, white, stage:Stage I, alive, 860 days
3.9
TCGA-BC-A8YO-01A
0 years, female, white, stage:Stage IIIC, alive, 562 days
3.9
TCGA-G3-A6UC-01A
0 years, male, white, stage:Stage IIIB, alive, 671 days
3.8
TCGA-DD-A3A4-01A
0 years, male, white, stage:Stage IIIA, dead, 612 days
3.8
TCGA-DD-A1EE-01A
0 years, male, white, stage:Stage IIIA, dead, 349 days
3.5
TCGA-BD-A2L6-01A
0 years, male, white, stage:'--, alive, 1363 days
3.3
TCGA-G3-A3CG-01A
0 years, male, white, stage:Stage I, alive, 673 days
3.3
TCGA-HP-A5N0-01A
0 years, female, stage:'--, dead, 752 days
3.1
TCGA-2Y-A9GT-01A
0 years, male, white, stage:Stage I, dead, 1624 days
3.1
TCGA-G3-A7M5-01A
0 years, male, asian, stage:Stage I, alive, 447 days
3.1
TCGA-KR-A7K2-01A
0 years, male, white, stage:Stage I, alive, 829 days
3.0
TCGA-DD-AAVX-01A
0 years, male, asian, stage:Stage II, alive, 1718 days
2.9
TCGA-DD-AADV-01A
0 years, male, asian, stage:Stage I, alive, 574 days
2.8
TCGA-G3-AAV0-01A
0 years, male, asian, stage:Stage I, alive, 476 days
2.8
TCGA-CC-A7IH-01A
0 years, male, asian, stage:Stage IIIA, alive, 365 days
2.8
TCGA-DD-AAW0-01A
0 years, male, asian, stage:Stage I, alive, 2015 days
2.7
TCGA-G3-A25T-01A
0 years, female, white, stage:Stage IIIA, alive, 1553 days
2.6
TCGA-G3-A7M6-01A
0 years, female, white, stage:Stage I, alive, 632 days
2.6
TCGA-DD-AAE4-01A
0 years, female, asian, stage:Stage I, alive, 608 days
2.4
TCGA-FV-A495-01A
0 years, female, white, stage:Stage II, alive, 1 days
2.4
TCGA-DD-AAVP-01A
0 years, male, asian, stage:Stage I, alive, 2752 days
2.4
TCGA-UB-A7MC-01A
0 years, male, white, stage:Stage IIIA, alive, 500 days
2.3
TCGA-DD-A4NF-01A
0 years, male, white, stage:Stage I, alive, 942 days
2.2
TCGA-BC-A217-01A
0 years, female, white, stage:Stage II, dead, 1397 days
2.1
TCGA-DD-AAVY-01A
0 years, male, asian, stage:Stage IIIA, alive, 1970 days
2.0
TCGA-CC-A7IE-01A
0 years, male, asian, stage:Stage IIIA, dead, 217 days
2.0
TCGA-DD-A1EB-01A
0 years, female, stage:Stage I, alive, 2017 days
2.0
TCGA-DD-AAC9-01A
0 years, male, asian, stage:Stage I, alive, 347 days
2.0
TCGA-DD-A114-01A
0 years, male, black or african american, stage:Stage II, dead, 1149 days
1.9
TCGA-BC-A216-01A
0 years, female, white, stage:Stage IIIA, alive, 1351 days
1.9
TCGA-LG-A9QC-01A
0 years, male, white, stage:Stage I, alive, 425 days
1.9
TCGA-G3-AAV4-01A
0 years, female, white, stage:Stage I, dead, 27 days
1.9
TCGA-ZP-A9D2-01A
0 years, male, white, stage:'--, dead, 765 days
1.7
TCGA-DD-AADA-01A
0 years, female, asian, stage:Stage I, alive, 1233 days
1.6
TCGA-ZS-A9CG-01A
0 years, male, white, stage:Stage II, alive, 341 days
1.6
TCGA-G3-A3CH-01A
0 years, male, asian, stage:Stage IIIA, alive, 780 days
1.5
TCGA-EP-A12J-01A
0 years, male, black or african american, stage:Stage I, alive, 570 days
1.5
TCGA-KR-A7K0-01A
0 years, male, white, stage:Stage I, dead, 65 days
1.5
TCGA-CC-A3MA-01A
0 years, male, asian, stage:Stage IIIA, dead, 303 days
1.5
TCGA-DD-AAEI-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
1.5
TCGA-DD-A39X-01A
0 years, female, white, stage:Stage I, dead, 1694 days
1.4
TCGA-2Y-A9H9-01A
0 years, male, white, stage:Stage I, alive, 697 days
1.4
TCGA-NI-A4U2-01A
0 years, male, white, stage:Stage IIIA, dead, 1791 days
1.3
TCGA-FV-A3R2-01A
0 years, male, white, stage:Stage I, dead, 194 days
1.3
TCGA-EP-A26S-01A
0 years, male, white, stage:Stage I, alive, 608 days
1.3
TCGA-HP-A5MZ-01A
0 years, male, stage:Stage I, dead, 91 days
1.3
TCGA-DD-AAE7-01A
0 years, male, asian, stage:Stage I, alive, 644 days
1.2
TCGA-G3-A5SL-01A
0 years, male, white, stage:Stage II, alive, 621 days
1.1
TCGA-EP-A3JL-01A
0 years, male, white, stage:Stage I, alive, 303 days
1.1
TCGA-DD-AADC-01A
0 years, male, asian, stage:Stage I, dead, 425 days
1.1
TCGA-WX-AA47-01A
0 years, female, white, stage:Stage IIIA, dead, 556 days
1.1
TCGA-BC-A10Y-01A
0 years, male, white, stage:'--, dead, 711 days
1.0
TCGA-MI-A75H-01A
0 years, male, white, stage:'--, alive, 747 days
1.0
TCGA-UB-A7ME-01A
0 years, male, asian, stage:Stage I, alive, 486 days
1.0
TCGA-ED-A66Y-01A
0 years, female, asian, stage:Stage IIIA, dead, 296 days
1.0
TCGA-O8-A75V-01A
0 years, male, stage:Stage I, alive, 538 days
1.0
TCGA-DD-AAE3-01A
0 years, male, asian, stage:Stage I, alive, 566 days
0.9
TCGA-CC-5262-01A
0 years, male, asian, stage:Stage IIIC, dead, 103 days
0.9
TCGA-ZS-A9CE-01A
0 years, female, white, stage:Stage II, alive, 1241 days
0.9
TCGA-ZP-A9CV-01A
0 years, male, white, stage:'--, dead, 1088 days
0.9
TCGA-2Y-A9H5-01A
0 years, female, white, stage:Stage I, dead, 555 days
0.9
TCGA-DD-AAEH-01A
0 years, male, asian, stage:Stage I, alive, 784 days
0.9
TCGA-CC-A5UC-01A
0 years, male, asian, stage:Stage IIIA, dead, 347 days
0.8
TCGA-BW-A5NO-01A
0 years, male, black or african american, stage:Stage IIIA, alive, 20 days
0.8
TCGA-DD-AACH-01A
0 years, male, asian, stage:Stage II, dead, 195 days
0.8
TCGA-UB-A7MB-01A
0 years, male, white, stage:Stage II, alive, 601 days
0.8
TCGA-2Y-A9GY-01A
0 years, female, white, stage:Stage II, dead, 757 days
0.8
TCGA-G3-A3CK-01A
0 years, male, asian, stage:Stage I, alive, 585 days
0.8
TCGA-ED-A459-01A
0 years, male, asian, stage:Stage II, alive, 910 days
0.8
TCGA-DD-A116-01A
0 years, male, asian, stage:Stage IIIA, dead, 1622 days
0.8
TCGA-DD-AACJ-01A
0 years, male, asian, stage:Stage II, alive, 2102 days
0.8
TCGA-K7-A6G5-01A
0 years, male, white, stage:Stage I, alive, 512 days
0.8
TCGA-DD-AAE1-01A
0 years, male, asian, stage:Stage I, alive, 552 days
0.8
TCGA-DD-AAEB-01A
0 years, male, asian, stage:Stage I, alive, 478 days
0.7
TCGA-NI-A8LF-01A
0 years, male, white, stage:Stage I, alive, 799 days
0.7
TCGA-ZP-A9D0-01A
0 years, female, black or african american, stage:'--, alive, 1091 days
0.7
TCGA-CC-A3M9-01A
0 years, male, asian, stage:Stage IIIA, dead, 300 days
0.7
TCGA-QA-A7B7-01A
0 years, male, black or african american, stage:Stage II, alive, 94 days
0.7
TCGA-BC-A69I-01A
0 years, male, white, stage:Stage I, alive, 387 days
0.7
TCGA-DD-AADI-01A
0 years, female, asian, stage:Stage I, alive, 1085 days
0.7
TCGA-ES-A2HT-01A
0 years, male, black or african american, stage:Stage I, dead, 438 days
0.6
TCGA-DD-AACW-01A
0 years, male, asian, stage:Stage I, alive, 1424 days
0.6
TCGA-DD-AAD8-01A
0 years, female, asian, stage:Stage I, alive, 1219 days
0.6
TCGA-GJ-A3OU-01A
0 years, male, white, stage:Stage I, alive, 879 days
0.6
TCGA-DD-AAEE-01A
0 years, male, asian, stage:Stage I, alive, 810 days
0.6
TCGA-5R-AA1C-01A
0 years, male, white, stage:Stage II, alive, 520 days
0.6
TCGA-FV-A496-01A
0 years, female, white, stage:Stage I, alive, 10 days
0.6
TCGA-2Y-A9H1-01A
0 years, male, white, stage:Stage I, dead, 1229 days
0.5
TCGA-DD-AACK-01A
0 years, male, asian, stage:Stage I, alive, 9 days
0.5
TCGA-DD-AAW1-01A
0 years, male, asian, stage:Stage IIIA, alive, 1989 days
0.5
TCGA-XR-A8TG-01A
0 years, male, white, stage:Stage I, alive, 898 days
0.5
TCGA-CC-5261-01A
0 years, male, asian, stage:Stage II, dead, 97 days
0.5
TCGA-ED-A7PX-01A
0 years, female, asian, stage:Stage II, alive, 6 days
0.5
TCGA-DD-A3A5-01A
0 years, female, white, stage:Stage III, dead, 3125 days
0.5
TCGA-DD-A4NL-01A
0 years, male, white, stage:Stage I, alive, 1711 days
0.5
TCGA-DD-AACS-01A
0 years, male, asian, stage:Stage I, alive, 1804 days
0.5
TCGA-XR-A8TF-01A
0 years, male, white, stage:Stage I, dead, 693 days
0.5
TCGA-EP-A2KA-01A
0 years, female, white, stage:Stage IIIA, dead, 627 days
0.5
TCGA-DD-AAVS-01A
0 years, male, asian, stage:Stage I, alive, 1823 days
0.5
TCGA-FV-A23B-01A
0 years, female, white, stage:Stage II, dead, 1852 days
0.5
TCGA-DD-AAE0-01A
0 years, female, asian, stage:Stage IIIA, alive, 555 days
0.5
TCGA-DD-AAD6-01A
0 years, male, asian, stage:Stage IIIA, alive, 672 days
0.5
TCGA-DD-AAW2-01A
0 years, male, asian, stage:Stage I, alive, 1855 days
0.5
TCGA-DD-A11D-01A
0 years, female, white, stage:Stage I, dead, 1560 days
0.5
TCGA-K7-AAU7-01A
0 years, male, white, stage:Stage II, alive, 359 days
0.5
TCGA-DD-AADP-01A
0 years, male, asian, stage:Stage I, alive, 458 days
0.5
TCGA-EP-A2KC-01A
0 years, male, black or african american, stage:Stage I, dead, 19 days
0.5
TCGA-2Y-A9H4-01A
0 years, male, black or african american, stage:Stage I, alive, 1452 days
0.5
TCGA-DD-AAD5-01A
0 years, male, asian, stage:Stage I, alive, 1345 days
0.5
TCGA-DD-A1EH-01A
0 years, male, white, stage:Stage III, alive, 1495 days
0.5
TCGA-2Y-A9H2-01A
0 years, female, white, stage:Stage I, alive, 1731 days
0.5
TCGA-CC-5264-01A
0 years, male, asian, stage:Stage IIIA, dead, 102 days
0.4
TCGA-RC-A7S9-01A
0 years, female, asian, stage:Stage I, alive, 640 days
0.4
TCGA-G3-A25Y-01A
0 years, female, asian, stage:Stage I, dead, 452 days
0.4
TCGA-DD-AACP-01A
0 years, male, asian, stage:Stage I, alive, 415 days
0.4
TCGA-DD-AAD2-01A
0 years, male, asian, stage:Stage I, alive, 658 days
0.4
TCGA-DD-AADL-01A
0 years, male, asian, stage:Stage I, alive, 636 days
0.4
TCGA-DD-A115-01A
0 years, male, white, stage:Stage IIIA, dead, 2542 days
0.4
TCGA-ZP-A9D4-01A
0 years, female, white, stage:'--, alive, 395 days
0.4
TCGA-ES-A2HS-01A
0 years, male, white, stage:Stage I, dead, 688 days
0.3
TCGA-G3-A25S-01A
0 years, male, white, stage:Stage I, dead, 416 days
0.3
TCGA-DD-A39W-01A
0 years, female, white, stage:Stage III, dead, 827 days
0.3
TCGA-DD-A1EJ-01A
0 years, female, white, stage:Stage IIIC, dead, 1005 days
0.3
TCGA-BC-A10Z-01A
0 years, female, white, stage:Stage I, dead, 34 days
0.3
TCGA-DD-A11C-01A
0 years, male, white, stage:Stage I, alive, 662 days
0.3
TCGA-DD-AAVV-01A
0 years, male, asian, stage:Stage II, alive, 2455 days
0.3
TCGA-ED-A7XP-01A
0 years, female, asian, stage:Stage II, alive, 400 days
0.3
TCGA-2Y-A9HB-01A
0 years, male, stage:Stage I, alive, 260 days
0.3
TCGA-DD-AADJ-01A
0 years, female, asian, stage:Stage I, alive, 1066 days
0.3
TCGA-DD-A4NK-01A
0 years, female, white, stage:Stage IIIA, dead, 1210 days
0.3
TCGA-G3-A3CJ-01A
0 years, male, american indian or alaska native, stage:Stage II, alive, 594 days
0.3
TCGA-DD-A4NE-01A
0 years, female, white, stage:Stage IIIA, dead, 660 days
0.3
TCGA-CC-A7IK-01A
0 years, male, asian, stage:Stage IIIA, dead, 262 days
0.3
TCGA-G3-AAV5-01A
0 years, male, white, stage:Stage II, alive, 354 days
0.3
TCGA-MR-A8JO-01A
0 years, male, white, stage:Stage I, alive, 330 days
0.3
TCGA-FV-A2QQ-01A
0 years, male, white, stage:Stage I, alive, 729 days
0.3
TCGA-DD-AACU-01A
0 years, male, asian, stage:Stage I, alive, 1567 days
0.3
TCGA-DD-AADM-01A
0 years, male, asian, stage:Stage II, dead, 12 days
0.3
TCGA-WX-AA44-01A
0 years, female, white, stage:Stage I, alive, 615 days
0.3
TCGA-DD-AAEK-01A
0 years, male, asian, stage:Stage II, alive, 1067 days
0.3
TCGA-RC-A6M6-01A
0 years, male, white, stage:Stage II, alive, 9 days
0.3
TCGA-EP-A3RK-01A
0 years, male, white, stage:Stage IIIA, alive, 363 days
0.3
TCGA-DD-A3A8-01A
0 years, male, white, stage:Stage II, dead, 11 days
0.3
TCGA-CC-A8HS-01A
0 years, male, asian, stage:Stage IIIC, dead, 300 days
0.3
TCGA-DD-A73F-01A
0 years, female, white, stage:Stage I, alive, 1085 days
0.3
TCGA-BC-A10W-01A
0 years, male, asian, stage:'--, dead, 91 days
0.3
TCGA-DD-AADY-01A
0 years, female, asian, stage:Stage I, alive, 555 days
0.3
TCGA-DD-AACA-01A
0 years, male, asian, stage:Stage I, alive, 2301 days
0.2
TCGA-DD-AAE9-01A
0 years, male, asian, stage:Stage I, alive, 722 days
0.2
TCGA-G3-AAV1-01A
0 years, male, asian, stage:Stage IIIC, dead, 359 days
0.2
TCGA-DD-A4NN-01A
0 years, female, white, stage:Stage I, dead, 899 days
0.2
TCGA-2Y-A9GW-01A
0 years, male, white, stage:Stage I, dead, 1271 days
0.2
TCGA-DD-A3A9-01A
0 years, female, white, stage:Stage IVB, dead, 931 days
0.2
TCGA-DD-AADQ-01A
0 years, male, asian, stage:Stage II, alive, 436 days
0.2
TCGA-DD-A39Z-01A
0 years, female, stage:Stage II, dead, 601 days
0.2
TCGA-DD-AADB-01A
0 years, male, asian, stage:Stage I, alive, 1242 days
0.2
TCGA-EP-A2KB-01A
0 years, female, white, stage:Stage I, dead, 596 days
0.2
TCGA-DD-AACX-01A
0 years, male, asian, stage:Stage II, alive, 170 days
0.2
TCGA-2Y-A9H7-01A
0 years, female, white, stage:Stage I, alive, 1168 days
0.2
TCGA-DD-A4NA-01A
0 years, female, white, stage:Stage IIIC, alive, 1008 days
0.2
TCGA-BC-A10S-01A
0 years, male, white, stage:'--, dead, 1423 days
0.2
TCGA-DD-A11B-01A
0 years, male, white, stage:Stage I, dead, 14 days
0.2
TCGA-ED-A7PY-01A
0 years, female, asian, stage:Stage II, alive, 390 days
0.2
TCGA-BC-A3KF-01A
0 years, female, white, stage:Stage I, alive, 8 days
0.2
TCGA-RC-A7SK-01A
0 years, male, asian, stage:Stage I, alive, 472 days
0.2
TCGA-DD-AAD3-01A
0 years, male, asian, stage:Stage I, alive, 1295 days
0.2
TCGA-2Y-A9GU-01A
0 years, female, white, stage:Stage I, alive, 1939 days
0.2
TCGA-G3-A7M9-01A
0 years, male, white, stage:Stage IIIB, dead, 56 days
0.2
TCGA-DD-A4NG-01A
0 years, male, white, stage:Stage IIIA, dead, 802 days
0.2
TCGA-2Y-A9H6-01A
0 years, female, white, stage:Stage I, alive, 357 days
0.2
TCGA-GJ-A6C0-01A
0 years, female, white, stage:Stage II, dead, 31 days
0.2
TCGA-5R-AA1D-01A
0 years, female, white, stage:Stage IIIA, alive, 449 days
0.2
TCGA-DD-AAE6-01A
0 years, female, asian, stage:Stage I, alive, 141 days
0.1
TCGA-DD-AADU-01A
0 years, male, asian, stage:Stage II, alive, 554 days
0.1
TCGA-G3-AAV6-01A
0 years, female, white, stage:Stage IIIA, dead, 65 days
0.1
TCGA-G3-AAV2-01A
0 years, male, white, stage:Stage I, alive, 372 days
0.1
TCGA-DD-A73A-01A
0 years, male, white, stage:Stage I, alive, 728 days
0.1
TCGA-XR-A8TC-01A
0 years, female, white, stage:Stage I, alive, 1339 days
0.1
TCGA-CC-5258-01A
0 years, male, asian, stage:Stage II, dead, 129 days
0.1
TCGA-FV-A3I0-01A
0 years, female, white, stage:Stage II, alive, 848 days
0.1
TCGA-5C-A9VG-01A
0 years, male, white, stage:Stage II, alive, 328 days
0.1
TCGA-DD-AADW-01A
0 years, male, asian, stage:Stage I, alive, 587 days
0.1
TCGA-KR-A7K7-01A
0 years, female, white, stage:Stage II, alive, 951 days
0.1
TCGA-DD-A39V-01A
0 years, male, white, stage:Stage II, dead, 643 days
0.1
TCGA-DD-AA3A-01A
0 years, female, white, stage:Stage I, dead, 410 days
0.1
TCGA-BC-A3KG-01A
0 years, female, white, stage:Stage II, alive, 680 days
0.1
TCGA-DD-AACY-01A
0 years, male, asian, stage:Stage I, alive, 1450 days
0.1
TCGA-5C-A9VH-01A
0 years, male, white, stage:Stage I, alive, 322 days
0.1
TCGA-RC-A6M4-01A
0 years, female, white, stage:Stage IIIA, alive, 22 days
0.1
TCGA-DD-A1EG-01A
0 years, male, white, stage:Stage I, dead, 1372 days
0.1
TCGA-DD-A4NJ-01A
0 years, female, white, stage:Stage II, alive, 928 days
0.1
TCGA-G3-AAV3-01A
0 years, female, white, stage:Stage II, alive, 412 days
0.1
TCGA-DD-AACZ-01A
0 years, female, asian, stage:Stage I, dead, 171 days
0.1
TCGA-GJ-A9DB-01A
0 years, male, white, stage:Stage I, dead, 67 days
0.1
TCGA-FV-A3R3-01A
0 years, female, white, stage:Stage I, dead, 366 days
0.1
TCGA-ZP-A9CZ-01A
0 years, male, asian, stage:'--, alive, 706 days
0.1
TCGA-G3-A5SM-01A
0 years, male, white, stage:Stage II, alive, 520 days
0.1
TCGA-DD-A73B-01A
0 years, female, white, stage:Stage I, dead, 283 days
0.1
TCGA-DD-AADR-01A
0 years, male, asian, stage:Stage I, alive, 2028 days
0.1
TCGA-CC-A5UD-01A
0 years, male, asian, stage:Stage IIIA, dead, 304 days
0.1
TCGA-RC-A6M5-01A
0 years, female, white, stage:Stage IVA, alive, 15 days
0.1
TCGA-RC-A7SF-01A
0 years, male, asian, stage:Stage I, alive, 579 days
0.1
TCGA-3K-AAZ8-01A
0 years, male, black or african american, stage:Stage IIIB, alive, 396 days
0.1
TCGA-2Y-A9GS-01A
0 years, male, white, stage:'--, dead, 724 days
0.1
TCGA-DD-A3A6-01A
0 years, female, white, stage:Stage II, dead, 3258 days
0.1
TCGA-CC-5260-01A
0 years, female, asian, stage:Stage IIIC, dead, 87 days
0.1
TCGA-DD-A39Y-01A
0 years, male, asian, stage:Stage I, dead, 171 days
0.1
TCGA-BD-A3EP-01A
0 years, female, black or african american, stage:Stage I, alive, 409 days
0.1
TCGA-KR-A7K8-01A
0 years, male, stage:Stage I, alive, 906 days
0.1
TCGA-ED-A7PZ-01A
0 years, male, asian, stage:Stage II, alive, 6 days
0.1
TCGA-DD-AAVR-01A
0 years, male, asian, stage:Stage I, alive, 2513 days
0.1
TCGA-G3-A3CI-01A
0 years, male, white, stage:Stage I, alive, 180 days
0.1
TCGA-DD-AADK-01A
0 years, female, asian, stage:Stage II, alive, 1049 days
0.1
TCGA-LG-A9QD-01A
0 years, male, white, stage:Stage IIIA, alive, 366 days
0.1
TCGA-G3-A7M7-01A
0 years, male, white, stage:Stage I, alive, 361 days
0.1
TCGA-DD-AACL-01A
0 years, female, asian, stage:Stage I, dead, 107 days
0.1
TCGA-DD-A1EL-01A
0 years, male, black or african american, stage:Stage II, dead, 415 days
0.1
TCGA-DD-AACQ-01A
0 years, male, asian, stage:Stage II, dead, 432 days
0.1
TCGA-DD-A4NR-01A
0 years, female, white, stage:Stage I, dead, 9 days
0.1
TCGA-BC-A10Q-01A
0 years, female, white, stage:'--, dead, 1135 days
0.1
TCGA-MI-A75C-01A
0 years, male, white, stage:Stage I, alive, 291 days
0.1
TCGA-DD-A4NO-01A
0 years, male, white, stage:Stage I, alive, 2245 days
0.1
TCGA-G3-A25Z-01A
0 years, male, asian, stage:Stage I, alive, 655 days
0.1
TCGA-K7-A5RG-01A
0 years, male, black or african american, stage:Stage I, alive, 519 days
0.1
TCGA-ED-A66X-01A
0 years, male, asian, stage:Stage IIIA, alive, 406 days
0.1
TCGA-DD-AAVQ-01A
0 years, male, asian, stage:Stage I, alive, 2728 days
0.1
TCGA-DD-AADS-01A
0 years, male, asian, stage:Stage I, alive, 474 days
0.1
TCGA-T1-A6J8-01A
0 years, male, white, stage:'--, alive, 23 days
0.1
TCGA-CC-A7II-01A
0 years, male, asian, stage:Stage IIIA, alive, 399 days
0.1
TCGA-DD-A73D-01A
0 years, female, white, stage:Stage II, alive, 693 days
0.1
TCGA-CC-A7IL-01A
0 years, male, asian, stage:Stage IIIA, dead, 278 days
0.1
TCGA-DD-A113-01A
0 years, female, white, stage:Stage II, alive, 2425 days
0.1
TCGA-G3-A5SI-01A
0 years, male, asian, stage:Stage II, dead, 768 days
0.1
TCGA-DD-AACO-01A
0 years, male, asian, stage:Stage I, alive, 1876 days
0.1
TCGA-CC-A7IG-01A
0 years, male, asian, stage:Stage II, dead, 299 days
0.1
TCGA-DD-AADD-01A
0 years, male, asian, stage:Stage I, alive, 1231 days
0.1
TCGA-ZP-A9D1-01A
0 years, female, white, stage:'--, alive, 21 days
0.1
TCGA-FV-A2QR-01A
0 years, male, white, stage:Stage I, dead, 581 days
0.1
TCGA-ZS-A9CD-01A
0 years, male, white, stage:Stage II, dead, 1386 days
0.1
TCGA-BC-A112-01A
0 years, male, white, stage:'--, dead, 153 days
0.1
TCGA-WQ-AB4B-01A
0 years, male, white, stage:Stage II, alive, 395 days
0.1
TCGA-CC-A3MC-01A
0 years, male, asian, stage:Stage IIIA, alive, 363 days
0.1
TCGA-DD-AACE-01A
0 years, male, asian, stage:Stage I, alive, 2184 days
0.1
TCGA-CC-5259-01A
0 years, female, asian, stage:Stage IIIC, alive, 250 days
0.1
TCGA-DD-A118-01A
0 years, female, white, stage:Stage II, alive, 3437 days
0.1
TCGA-CC-A123-01A
0 years, female, asian, stage:Stage IIIA, alive, 219 days
0.1
TCGA-G3-A7M8-01A
0 years, male, asian, stage:Stage I, alive, 430 days
0.0
TCGA-DD-AAC8-01A
0 years, male, asian, stage:Stage I, dead, 16 days
0.0
TCGA-DD-A3A7-01A
0 years, male, stage:Stage IIIB, dead, 419 days
0.0
TCGA-DD-A1EC-01A
0 years, female, white, stage:Stage I, alive, 602 days
0.0
TCGA-DD-A1EF-01A
0 years, female, white, stage:Stage I, dead, 394 days
0.0
TCGA-CC-A7IF-01A
0 years, male, asian, stage:Stage IIIA, dead, 649 days
0.0
TCGA-DD-A73G-01A
0 years, female, white, stage:Stage I, alive, 3478 days
0.0
TCGA-DD-AACI-01A
0 years, male, asian, stage:Stage II, alive, 1618 days
0.0
TCGA-DD-AACB-01A
0 years, female, asian, stage:Stage I, alive, 2324 days
0.0
TCGA-DD-AAW3-01A
0 years, male, asian, stage:Stage I, alive, 1633 days
0.0
TCGA-ED-A5KG-01A
0 years, female, asian, stage:Stage II, alive, 854 days
0.0
TCGA-DD-A119-01A
0 years, male, asian, stage:Stage IV, dead, 223 days
0.0
TCGA-G3-AAV7-01A
0 years, male, asian, stage:Stage II, alive, 361 days
0.0
TCGA-CC-A7IJ-01A
0 years, male, asian, stage:Stage II, alive, 382 days
0.0
TCGA-DD-AADO-01A
0 years, male, asian, stage:Stage I, alive, 453 days
0.0
TCGA-DD-A4NB-01A
0 years, male, white, stage:Stage I, alive, 989 days
0.0
TCGA-DD-AAED-01A
0 years, male, asian, stage:Stage I, alive, 763 days
0.0
TCGA-DD-A4NH-01A
0 years, female, white, stage:Stage IIIB, alive, 917 days
0.0
TCGA-2Y-A9H3-01A
0 years, male, white, stage:Stage II, alive, 1516 days
0.0
TCGA-RC-A7SH-01A
0 years, male, asian, stage:Stage II, alive, 468 days
0.0
TCGA-2Y-A9H8-01A
0 years, female, white, stage:'--, dead, 633 days
0.0
TCGA-CC-5263-01A
0 years, male, asian, stage:Stage IIIA, dead, 129 days
0.0
TCGA-CC-A8HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 140 days
0.0
TCGA-CC-A5UE-01A
0 years, male, asian, stage:Stage IIIB, dead, 272 days
0.0
TCGA-DD-AAD0-01A
0 years, female, asian, stage:Stage I, alive, 137 days
0.0
TCGA-DD-AACG-01A
0 years, male, asian, stage:Stage II, dead, 469 days
0.0
TCGA-DD-A3A3-01A
0 years, male, asian, stage:Stage I, dead, 535 days
0.0
TCGA-DD-A3A1-01A
0 years, male, stage:Stage IIIA, dead, 233 days
0.0
TCGA-LG-A6GG-01A
0 years, female, white, stage:Stage II, alive, 387 days
0.0
TCGA-CC-A8HV-01A
0 years, female, asian, stage:Stage II, dead, 279 days
0.0
TCGA-BD-A3ER-01A
0 years, male, white, stage:Stage II, alive, 1115 days
0.0
TCGA-DD-AACF-01A
0 years, male, asian, stage:Stage I, dead, 365 days
0.0
TCGA-DD-AAVU-01A
0 years, male, asian, stage:Stage II, alive, 2202 days
0.0
TCGA-BC-A10R-01A
0 years, female, white, stage:'--, dead, 308 days
0.0
TCGA-BC-A69H-01A
0 years, male, white, stage:Stage II, alive, 444 days
0.0
TCGA-UB-A7MF-01A
0 years, male, white, stage:Stage IIIA, dead, 214 days
0.0
TCGA-CC-A9FW-01A
0 years, male, asian, stage:Stage IIIA, alive, 248 days
0.0
TCGA-FV-A4ZP-01A
0 years, male, white, stage:Stage IIIA, dead, 2486 days
0.0
TCGA-G3-A25X-01A
0 years, male, asian, stage:Stage II, alive, 1779 days
0.0
TCGA-FV-A4ZQ-01A
0 years, male, white, stage:Stage I, alive, 12 days
0.0
TCGA-5C-AAPD-01A
0 years, male, asian, stage:Stage II, alive, 20 days
0.0
TCGA-CC-A8HU-01A
0 years, female, asian, stage:Stage IIIA, dead, 344 days
0.0
TCGA-DD-AAVW-01A
0 years, male, asian, stage:Stage I, alive, 2317 days
0.0
TCGA-ED-A82E-01A
0 years, female, asian, stage:Stage IIIA, alive, 408 days
0.0
TCGA-G3-A5SJ-01A
0 years, male, white, stage:Stage I, alive, 698 days
0.0
TCGA-DD-A73C-01A
0 years, female, white, stage:Stage IIIA, alive, 701 days
0.0
TCGA-PD-A5DF-01A
0 years, female, white, stage:Stage IIIB, dead, 639 days
0.0
TCGA-DD-AAEG-01A
0 years, female, asian, stage:Stage I, alive, 719 days
0.0
TCGA-MI-A75I-01A
0 years, male, black or african american, stage:'--, alive, 630 days
0.0
TCGA-DD-AAEA-01A
0 years, male, asian, stage:Stage I, alive, 575 days
0.0
TCGA-UB-A7MA-01A
0 years, female, white, stage:Stage II, alive, 848 days
0.0
TCGA-DD-AADN-01A
0 years, male, asian, stage:Stage I, alive, 898 days
0.0
TCGA-ED-A8O5-01A
0 years, female, asian, stage:Stage IIIA, alive, 406 days
0.0
TCGA-ED-A8O6-01A
0 years, female, asian, stage:Stage IIIA, dead, 56 days
0.0
TCGA-DD-A4NQ-01A
0 years, male, white, stage:Stage II, dead, 373 days
0.0
TCGA-RG-A7D4-01A
0 years, male, black or african american, stage:Stage II, alive, 1098 days
0.0
TCGA-WJ-A86L-01A
0 years, female, white, stage:Stage I, alive, 345 days
0.0
TCGA-4R-AA8I-01A
0 years, male, white, stage:Stage II, dead, 262 days
0.0
TCGA-FV-A3I1-01A
0 years, female, white, stage:Stage II, dead, 247 days
0.0
TCGA-MR-A520-01A
0 years, male, white, stage:Stage I, alive, 229 days
0.0
TCGA-DD-AAVZ-01A
0 years, male, asian, stage:Stage I, alive, 1900 days
0.0
TCGA-CC-A1HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 101 days
0.0
TCGA-2Y-A9H0-01A
0 years, male, white, stage:Stage IIIA, alive, 3675 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
FCN2 is not prognostic in Liver Hepatocellular Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
3.5
Number of samples
231
Samples
Sample
Description
TPM
DO23551
0 years, male, NA, stage:3, dead, 150 days
104.6
DO23531
0 years, female, NA, stage:3, alive, 900 days
85.2
DO23550
0 years, male, NA, stage:1, alive, 990 days
49.1
DO45229
0 years, male, NA, stage:1, alive, 990 days
44.1
DO48760
0 years, female, NA, stage:2, alive, 690 days
38.0
DO50803
0 years, female, NA, stage:1, alive, 540 days
37.3
DO23532
0 years, female, NA, stage:1, alive, 960 days
36.8
DO45215
0 years, male, NA, stage:2, alive, 1170 days
26.8
DO50774
0 years, female, NA, stage:2, alive, 720 days
26.1
DO45195
0 years, male, NA, stage:1, alive, 390 days
18.6
DO227643
0 years, male, NA, stage:2, alive, 1260 days
17.7
DO23544
0 years, male, NA, stage:2, alive, 960 days
16.9
DO227801
0 years, female, NA, stage:1, alive, 660 days
15.7
DO23512
0 years, male, NA, stage:1, alive, 1260 days
15.0
DO48674
0 years, male, NA, stage:2, alive, 1260 days
15.0
DO45101
0 years, male, NA, stage:2, alive, 1680 days
14.5
DO45107
0 years, female, NA, stage:2, alive, 1710 days
14.0
DO50814
0 years, male, NA, stage:3, alive, 420 days
13.9
DO45181
0 years, female, NA, stage:2, alive, 1200 days
13.5
DO23538
0 years, male, NA, stage:2, alive, 450 days
12.4
DO45235
0 years, female, NA, stage:1, alive, 900 days
10.5
DO48701
0 years, male, NA, stage:2, alive, 780 days
10.3
DO45167
0 years, male, NA, stage:2, dead, 1440 days
9.1
DO45233
0 years, male, NA, stage:3, alive, 900 days
9.0
DO23517
0 years, male, NA, stage:2, alive, 1200 days
8.8
DO45231
0 years, male, NA, stage:2, alive, 930 days
8.0
DO23513
0 years, male, NA, stage:3, alive, 1200 days
6.9
DO45153
0 years, female, NA, stage:2, alive, 1380 days
6.3
DO45201
0 years, male, NA, stage:1, alive, 900 days
6.3
DO23546
0 years, male, NA, stage:2, alive, 1050 days
5.9
DO50825
0 years, male, NA, stage:2, alive, 390 days
5.5
DO45251
0 years, female, NA, stage:2, alive, 900 days
5.3
DO48733
0 years, male, NA, stage:2, alive, 600 days
4.7
DO45253
0 years, male, NA, stage:2, alive, 870 days
4.4
DO23535
0 years, male, NA, stage:1, alive, 960 days
4.3
DO23514
0 years, male, NA, stage:2, alive, 1290 days
3.5
DO23527
0 years, male, NA, stage:1, alive, 1050 days
3.3
DO23545
0 years, male, NA, stage:2, dead, 570 days
3.3
DO23530
0 years, male, NA, stage:4, dead, 180 days
3.2
DO50807
0 years, male, NA, stage:1, alive, 540 days
3.1
DO45097
0 years, male, NA, stage:3, alive, 1620 days
2.9
DO45135
0 years, male, NA, stage:1, alive, 1410 days
2.9
DO50787
0 years, male, NA, stage:3, alive, 480 days
2.8
DO45301
0 years, male, NA, stage:2, dead, 1440 days
2.8
DO48719
0 years, male, NA, stage:2, alive, 690 days
2.8
DO23548
0 years, female, NA, stage:1, alive, 840 days
2.7
DO45223
0 years, male, NA, stage:4, alive, 1020 days
2.7
DO45267
0 years, male, NA, stage:3, dead, 570 days
2.2
DO48721
0 years, female, NA, stage:1, alive, 900 days
2.1
DO45169
0 years, male, NA, stage:3, alive, 1350 days
2.1
DO50850
0 years, male, NA, stage:3, alive, 720 days
1.9
DO45305
0 years, male, NA, stage:4, alive, 300 days
1.5
DO48717
0 years, male, NA, stage:4, dead, 180 days
1.5
DO50829
0 years, male, NA, stage:3, alive, 570 days
1.5
DO45263
0 years, male, NA, stage:3, dead, 270 days
1.5
DO48679
0 years, male, NA, stage:2, alive, 1200 days
1.3
DO45155
0 years, male, NA, stage:2, alive, 2160 days
1.2
DO45247
0 years, female, NA, stage:2, alive, 210 days
1.1
DO45105
0 years, male, NA, stage:1, alive, 1680 days
1.1
DO45125
0 years, male, NA, stage:3, alive, 1680 days
1.1
DO45243
0 years, female, NA, stage:3, alive, 930 days
1.1
DO48742
0 years, male, NA, stage:2, alive, 600 days
1.1
DO48725
0 years, male, NA, stage:1, alive, 780 days
1.0
DO45149
0 years, female, NA, stage:2, alive, 1260 days
1.0
DO50817
0 years, male, NA, stage:2, alive, 390 days
1.0
DO45139
0 years, male, NA, stage:3, alive, 1320 days
1.0
DO50802
0 years, male, NA, stage:2, alive, 930 days
1.0
DO45123
0 years, female, NA, stage:2, dead, 570 days
0.9
DO45133
0 years, male, NA, stage:3, dead, 660 days
0.9
DO45171
0 years, male, NA, stage:3, alive, 600 days
0.9
DO23518
0 years, male, NA, stage:2, alive, 1320 days
0.9
DO50809
0 years, male, NA, stage:3, dead, 720 days
0.8
DO23508
0 years, female, NA, stage:2, alive, 390 days
0.8
DO50845
0 years, male, NA, stage:3, alive, 210 days
0.8
DO48743
0 years, female, NA, stage:2, alive, 570 days
0.8
DO23543
0 years, male, NA, stage:2, alive, 1020 days
0.7
DO45177
0 years, female, NA, stage:3, alive, 1260 days
0.7
DO23511
0 years, female, NA, stage:3, dead, 180 days
0.7
DO48716
0 years, male, NA, stage:2, alive, 720 days
0.7
DO45165
0 years, male, NA, stage:2, alive, 690 days
0.7
DO48693
0 years, male, NA, stage:2, alive, 900 days
0.7
DO45255
0 years, male, NA, stage:3, alive, 720 days
0.7
DO23534
0 years, male, NA, stage:2, alive, 840 days
0.6
DO50816
0 years, male, NA, stage:2, alive, 390 days
0.6
DO23533
0 years, male, NA, stage:2, alive, 900 days
0.6
DO23525
0 years, male, NA, stage:4, alive, 1050 days
0.6
DO45111
0 years, male, NA, stage:2, alive, 1590 days
0.6
DO45241
0 years, male, NA, stage:1, alive, 1080 days
0.5
DO45249
0 years, male, NA, stage:1, alive, 630 days
0.5
DO45099
0 years, male, NA, stage:3, alive, 1590 days
0.5
DO45257
0 years, male, NA, stage:3, alive, 810 days
0.5
DO48759
0 years, male, NA, stage:3, alive, 720 days
0.4
DO45285
0 years, male, NA, stage:3, alive, 480 days
0.4
DO23540
0 years, male, NA, stage:1, alive, 750 days
0.4
DO48706
0 years, male, NA, stage:2, alive, 870 days
0.4
DO45157
0 years, male, NA, stage:2, alive, 1980 days
0.4
DO23539
0 years, male, NA, stage:1, alive, 1110 days
0.4
DO48737
0 years, male, NA, stage:1, alive, 720 days
0.4
DO48672
0 years, male, NA, stage:2, alive, 450 days
0.4
DO50798
0 years, male, NA, stage:3, dead, 30 days
0.4
DO50818
0 years, male, NA, stage:2, alive, 510 days
0.4
DO45129
0 years, male, NA, stage:3, alive, 1470 days
0.4
DO48746
0 years, male, NA, stage:3, alive, 570 days
0.4
DO45261
0 years, male, NA, stage:3, alive, 990 days
0.4
DO45095
0 years, male, NA, stage:2, alive, 1620 days
0.4
DO50840
0 years, male, NA, stage:2, alive, 330 days
0.3
DO45287
0 years, male, NA, stage:1, alive, 390 days
0.3
DO50800
0 years, male, NA, stage:2, alive, 510 days
0.3
DO23536
0 years, male, NA, stage:2, alive, 930 days
0.3
DO48677
0 years, male, NA, stage:3, alive, 1140 days
0.3
DO45103
0 years, male, NA, stage:3, alive, 450 days
0.3
DO45207
0 years, male, NA, stage:1, alive, 1050 days
0.3
DO50808
0 years, male, NA, stage:2, alive, 570 days
0.3
DO48741
0 years, male, NA, stage:3, alive, 240 days
0.3
DO45245
0 years, female, NA, stage:2, dead, 240 days
0.3
DO50820
0 years, female, NA, stage:3, alive, 510 days
0.3
DO23523
0 years, male, NA, stage:3, alive, 1080 days
0.3
DO45205
0 years, female, NA, stage:2, dead, 90 days
0.3
DO45197
0 years, male, NA, stage:2, alive, 1170 days
0.2
DO45094
0 years, male, NA, stage:3, alive, 1650 days
0.2
DO45193
0 years, female, NA, stage:4, dead, 120 days
0.2
DO45225
0 years, male, NA, stage:1, alive, 1050 days
0.2
DO45281
0 years, male, NA, stage:4, alive, 750 days
0.2
DO48727
0 years, female, NA, stage:2, dead, 390 days
0.2
DO45213
0 years, male, NA, stage:1, alive, 1200 days
0.2
DO50855
0 years, male, NA, stage:2, alive, 570 days
0.2
DO45127
0 years, male, NA, stage:3, dead, 420 days
0.2
DO45143
0 years, male, NA, stage:3, alive, 1290 days
0.2
DO50805
0 years, male, NA, stage:2, alive, 690 days
0.2
DO23541
0 years, male, NA, stage:2, alive, 930 days
0.2
DO45259
0 years, male, NA, stage:3, alive, 330 days
0.2
DO48751
0 years, male, NA, stage:2, dead, 480 days
0.2
DO45221
0 years, female, NA, stage:4, dead, 390 days
0.2
DO23547
0 years, male, NA, stage:1, alive, 1020 days
0.2
DO48736
0 years, female, NA, stage:1, alive, 600 days
0.2
DO45273
0 years, male, NA, stage:2, alive, 480 days
0.2
DO45131
0 years, male, NA, stage:4, dead, 360 days
0.2
DO45297
0 years, female, NA, stage:4, dead, 1260 days
0.2
DO50791
0 years, female, NA, stage:1, dead, 480 days
0.2
DO50857
0 years, male, NA, stage:2, alive, 210 days
0.2
DO50804
0 years, male, NA, stage:2, alive, 720 days
0.2
DO45163
0 years, male, NA, stage:2, alive, 960 days
0.2
DO50783
0 years, male, NA, stage:3, alive, 480 days
0.2
DO45145
0 years, male, NA, stage:3, dead, 60 days
0.2
DO23526
0 years, male, NA, stage:3, alive, 1050 days
0.2
DO50822
0 years, male, NA, stage:2, alive, 510 days
0.2
DO45289
0 years, female, NA, stage:3, alive, 360 days
0.2
DO23542
0 years, male, NA, stage:3, alive, 960 days
0.2
DO45159
0 years, male, NA, stage:3, alive, 1470 days
0.2
DO50813
0 years, male, NA, stage:2, alive, 420 days
0.2
DO50793
0 years, male, NA, stage:4, alive, 540 days
0.2
DO50819
0 years, female, NA, stage:2, alive, 510 days
0.2
DO48695
0 years, male, NA, stage:2, alive, 720 days
0.2
DO48747
0 years, male, NA, stage:3, alive, 540 days
0.2
DO45191
0 years, female, NA, stage:2, alive, 1200 days
0.2
DO45307
0 years, female, NA, stage:4, dead, 240 days
0.2
DO50806
0 years, male, NA, stage:4, alive, 540 days
0.1
DO45141
0 years, male, NA, stage:2, alive, 1320 days
0.1
DO48681
0 years, male, NA, stage:2, alive, 900 days
0.1
DO45187
0 years, female, NA, stage:1, alive, 1260 days
0.1
DO45109
0 years, male, NA, stage:2, alive, 1590 days
0.1
DO45091
0 years, male, NA, stage:2, dead, 1320 days
0.1
DO45275
0 years, male, NA, stage:3, dead, 10 days
0.1
DO45217
0 years, female, NA, stage:3, dead, 270 days
0.1
DO45283
0 years, male, NA, stage:3, alive, 510 days
0.1
DO48715
0 years, female, NA, stage:2, dead, 690 days
0.1
DO45119
0 years, male, NA, stage:3, dead, 510 days
0.1
DO48720
0 years, female, NA, stage:2, alive, 570 days
0.1
DO50859
0 years, male, NA, stage:2, alive, 180 days
0.1
DO45279
0 years, male, NA, stage:3, alive, 1290 days
0.1
DO45303
0 years, female, NA, stage:3, alive, 990 days
0.1
DO45277
0 years, male, NA, stage:3, alive, 600 days
0.1
DO48704
0 years, female, NA, stage:3, alive, 750 days
0.1
DO45175
0 years, male, NA, stage:2, alive, 1140 days
0.1
DO48697
0 years, female, NA, stage:2, dead, 810 days
0.1
DO45299
0 years, female, NA, stage:1, alive, 1440 days
0.1
DO48761
0 years, male, NA, stage:2, alive, 870 days
0.1
DO23528
0 years, female, NA, stage:2, alive, 1020 days
0.1
DO48700
0 years, female, NA, stage:2, alive, 810 days
0.1
DO48732
0 years, male, NA, stage:3, alive, 630 days
0.1
DO23529
0 years, male, NA, stage:4, alive, 930 days
0.1
DO45219
0 years, male, NA, stage:2, alive, 1080 days
0.1
DO45239
0 years, male, NA, stage:2, alive, 870 days
0.1
DO23519
0 years, male, NA, stage:3, alive, 630 days
0.1
DO48728
0 years, female, NA, stage:2, alive, 150 days
0.1
DO23515
0 years, male, NA, stage:2, alive, 1230 days
0.1
DO45179
0 years, female, NA, stage:2, alive, 600 days
0.1
DO23549
0 years, male, NA, stage:3, alive, 990 days
0.1
DO45121
0 years, male, NA, stage:3, alive, 1530 days
0.1
DO48712
0 years, male, NA, stage:2, alive, 810 days
0.1
DO45185
0 years, male, NA, stage:2, alive, 600 days
0.1
DO45096
0 years, male, NA, stage:2, dead, 1290 days
0.1
DO50811
0 years, male, NA, stage:1, alive, 450 days
0.1
DO50799
0 years, female, NA, stage:2, alive, 540 days
0.1
DO50839
0 years, female, NA, stage:3, alive, 330 days
0.1
DO45211
0 years, male, NA, stage:3, alive, 240 days
0.1
DO45093
0 years, male, NA, stage:2, dead, 720 days
0.1
DO23537
0 years, male, NA, stage:2, dead, 900 days
0.1
DO45189
0 years, female, NA, stage:2, alive, 1200 days
0.1
DO50789
0 years, female, NA, stage:2, alive, 570 days
0.1
DO48723
0 years, male, NA, stage:1, alive, 600 days
0.1
DO45092
0 years, male, NA, stage:4, dead, 1200 days
0.1
DO50832
0 years, male, NA, stage:3, alive, 90 days
0.1
DO45113
0 years, male, NA, stage:3, alive, 1560 days
0.1
DO45227
0 years, female, NA, stage:2, alive, 1020 days
0.1
DO45117
0 years, female, NA, stage:2, dead, 1110 days
0.1
DO23521
0 years, male, NA, stage:3, alive, 1110 days
0.1
DO45265
0 years, male, NA, stage:3, alive, 1020 days
0.1
DO50778
0 years, male, NA, stage:4, alive, 630 days
0.1
DO23524
0 years, female, NA, stage:2, alive, 1050 days
0.1
DO48730
0 years, female, NA, stage:2, alive, 630 days
0.1
DO45237
0 years, male, NA, stage:2, alive, 900 days
0.1
DO45209
0 years, male, NA, stage:4, alive, 1350 days
0.1
DO23516
0 years, male, NA, stage:3, dead, 20 days
0.1
DO45115
0 years, male, NA, stage:2, alive, 840 days
0.1
DO45173
0 years, male, NA, stage:3, alive, 1170 days
0.0
DO23552
0 years, female, NA, stage:1, alive, 810 days
0.0
DO48757
0 years, female, NA, stage:3, alive, 480 days
0.0
DO50776
0 years, male, NA, stage:1, alive, 690 days
0.0
DO45183
0 years, female, NA, stage:2, dead, 570 days
0.0
DO45161
0 years, male, NA, stage:2, dead, 540 days
0.0
DO50844
0 years, male, NA, stage:4, alive, 300 days
0.0
DO23510
0 years, female, NA, stage:2, alive, 870 days
0.0
DO48682
0 years, female, NA, stage:3, dead, 120 days
0.0
DO45269
0 years, male, NA, stage:3, alive, 750 days
0.0
DO23509
0 years, male, NA, stage:3, dead, 780 days
0.0
DO45137
0 years, male, NA, stage:1, alive, 1320 days
0.0
DO45199
0 years, female, NA, stage:2, alive, 1350 days
0.0
DO50815
0 years, male, NA, stage:3, alive, 150 days
0.0
DO45203
0 years, female, NA, stage:2, alive, 1170 days
0.0
DO50785
0 years, male, NA, stage:4, dead, 90 days
0.0
Show allShow less
LIVER HEPATOCELLULAR CARCINOMA - Protein relative expression (CPTAC)
Number of samples
330
Samples
Sample ID
Sample type
nRPX
536
Normal
2.0
344
Normal
1.8
394
Normal
1.7
224
Normal
1.6
352
Normal
1.6
778
Normal
1.6
498
Normal
1.5
568
Normal
1.5
984
Normal
1.4
672
Normal
1.4
686
Normal
1.3
148
Normal
1.3
328
Normal
1.2
462
Normal
1.2
528
Normal
1.2
436
Normal
1.2
744
Normal
1.2
376
Normal
1.2
954
Normal
1.2
488
Normal
1.2
1028
Normal
1.1
866
Normal
1.1
868
Normal
1.1
696
Normal
1.1
424
Normal
1.1
446
Normal
1.1
636
Normal
1.1
926
Normal
1.1
314
Normal
1.1
616
Normal
1.1
368
Normal
1.0
1014
Normal
1.0
142
Normal
1.0
1042
Normal
1.0
478
Normal
1.0
922
Normal
1.0
756
Normal
1.0
332
Normal
0.9
111
Normal
0.9
968
Normal
0.9
464
Normal
0.9
914
Normal
0.9
298
Normal
0.9
538
Normal
0.9
466
Normal
0.9
642
Normal
0.9
258
Normal
0.9
124
Normal
0.9
1022
Normal
0.8
384
Normal
0.8
218
Normal
0.8
818
Normal
0.8
162
Normal
0.8
944
Normal
0.8
342
Normal
0.8
952
Normal
0.8
482
Normal
0.8
824
Normal
0.8
564
Normal
0.8
816
Normal
0.8
714
Normal
0.8
966
Normal
0.8
222
Normal
0.7
358
Normal
0.7
978
Normal
0.7
452
Normal
0.7
186
Normal
0.7
526
Normal
0.7
916
Normal
0.7
474
Normal
0.7
212
Normal
0.7
272
Normal
0.7
862
Normal
0.7
284
Normal
0.7
172
Normal
0.7
546
Normal
0.6
414
Normal
0.6
882
Normal
0.6
416
Normal
0.6
434
Normal
0.6
514
Normal
0.6
1026
Normal
0.6
468
Normal
0.6
716
Normal
0.6
572
Normal
0.6
618
Normal
0.6
534
Normal
0.6
874
Normal
0.6
742
Normal
0.6
518
Normal
0.5
196
Normal
0.5
786
Normal
0.5
362
Normal
0.5
388
Normal
0.5
286
Normal
0.5
662
Normal
0.5
188
Normal
0.5
262
Normal
0.5
448
Normal
0.5
1016
Normal
0.5
126
Normal
0.5
392
Normal
0.5
524
Normal
0.5
698
Normal
0.5
396
Normal
0.5
312
Normal
0.5
858
Normal
0.5
1046
Normal
0.5
1044
Normal
0.5
938
Normal
0.4
746
Normal
0.4
114
Normal
0.4
494
Normal
0.4
484
Normal
0.4
964
Normal
0.4
364
Normal
0.4
722
Normal
0.4
554
Normal
0.4
666
Normal
0.4
278
Normal
0.4
864
Normal
0.4
268
Normal
0.4
918
Normal
0.3
912
Normal
0.3
884
Normal
0.3
386
Normal
0.3
444
Normal
0.3
146
Normal
0.3
878
Normal
0.3
192
Normal
0.3
492
Normal
0.3
738
Normal
0.3
574
Normal
0.3
1032
Normal
0.3
415
Tumor
0.3
356
Normal
0.2
354
Normal
0.2
728
Normal
0.2
217
Tumor
0.2
516
Normal
0.2
558
Normal
0.2
958
Normal
0.2
924
Normal
0.2
664
Normal
0.2
956
Normal
0.2
721
Tumor
0.1
128
Normal
0.1
955
Tumor
0.1
232
Normal
0.1
366
Normal
0.1
867
Tumor
0.1
136
Normal
0.1
713
Tumor
0.1
428
Normal
0.1
422
Normal
0.1
461
Tumor
0.1
432
Normal
0.0
877
Tumor
0.0
648
Normal
0.0
472
Normal
0.0
615
Tumor
0.0
976
Normal
0.0
456
Normal
0.0
343
Tumor
0.0
943
Tumor
0.0
723
Tumor
0.0
426
Normal
0.0
214
Normal
0.0
138
Normal
0.0
481
Tumor
0.0
617
Tumor
-0.1
412
Normal
-0.1
271
Tumor
-0.1
873
Tumor
-0.2
982
Normal
-0.2
447
Tumor
-0.2
261
Tumor
-0.3
917
Tumor
-0.3
228
Normal
-0.3
1045
Tumor
-0.3
491
Tumor
-0.3
697
Tumor
-0.3
823
Tumor
-0.3
628
Normal
-0.3
185
Tumor
-0.3
814
Normal
-0.4
881
Tumor
-0.4
297
Tumor
-0.4
852
Normal
-0.4
132
Normal
-0.4
785
Tumor
-0.5
563
Tumor
-0.5
353
Tumor
-0.5
671
Tumor
-0.5
351
Tumor
-0.5
913
Tumor
-0.5
365
Tumor
-0.5
857
Tumor
-0.6
383
Tumor
-0.6
257
Tumor
-0.7
685
Tumor
-0.7
231
Tumor
-0.7
145
Tumor
-0.7
187
Tumor
-0.7
195
Tumor
-0.7
1041
Tumor
-0.7
467
Tumor
-0.7
967
Tumor
-0.7
953
Tumor
-0.7
361
Tumor
-0.8
915
Tumor
-0.8
147
Tumor
-0.8
911
Tumor
-0.8
513
Tumor
-0.8
493
Tumor
-0.8
535
Tumor
-0.8
423
Tumor
-0.8
817
Tumor
-0.8
327
Tumor
-0.8
641
Tumor
-0.8
815
Tumor
-0.8
223
Tumor
-0.9
161
Tumor
-0.9
951
Tumor
-0.9
925
Tumor
-0.9
283
Tumor
-0.9
375
Tumor
-0.9
777
Tumor
-0.9
515
Tumor
-1.0
341
Tumor
-1.0
331
Tumor
-1.0
527
Tumor
-1.0
963
Tumor
-1.0
487
Tumor
-1.0
221
Tumor
-1.0
267
Tumor
-1.0
883
Tumor
-1.0
497
Tumor
-1.0
545
Tumor
-1.1
413
Tumor
-1.1
695
Tumor
-1.1
861
Tumor
-1.1
525
Tumor
-1.1
367
Tumor
-1.1
1025
Tumor
-1.1
171
Tumor
-1.1
553
Tumor
-1.1
523
Tumor
-1.1
357
Tumor
-1.1
191
Tumor
-1.1
937
Tumor
-1.2
465
Tumor
-1.2
567
Tumor
-1.2
421
Tumor
-1.2
435
Tumor
-1.2
141
Tumor
-1.2
391
Tumor
-1.2
433
Tumor
-1.2
311
Tumor
-1.2
483
Tumor
-1.2
627
Tumor
-1.2
517
Tumor
-1.2
355
Tumor
-1.3
213
Tumor
-1.3
571
Tumor
-1.3
813
Tumor
-1.3
965
Tumor
-1.4
1043
Tumor
-1.4
393
Tumor
-1.4
463
Tumor
-1.4
737
Tumor
-1.4
427
Tumor
-1.4
573
Tumor
-1.4
865
Tumor
-1.4
451
Tumor
-1.4
557
Tumor
-1.4
727
Tumor
-1.5
313
Tumor
-1.5
921
Tumor
-1.5
125
Tumor
-1.5
363
Tumor
-1.5
975
Tumor
-1.5
277
Tumor
-1.5
741
Tumor
-1.5
715
Tumor
-1.6
923
Tumor
-1.6
113
Tumor
-1.6
473
Tumor
-1.6
455
Tumor
-1.6
724
Normal
-1.6
863
Tumor
-1.6
477
Tumor
-1.6
1031
Tumor
-1.6
425
Tumor
-1.6
135
Tumor
-1.7
227
Tumor
-1.7
211
Tumor
-1.7
127
Tumor
-1.7
755
Tumor
-1.7
411
Tumor
-1.7
983
Tumor
-1.7
112
Tumor
-1.8
137
Tumor
-1.8
445
Tumor
-1.8
533
Tumor
-1.9
1021
Tumor
-1.9
1015
Tumor
-1.9
395
Tumor
-1.9
431
Tumor
-1.9
285
Tumor
-1.9
1027
Tumor
-1.9
385
Tumor
-1.9
537
Tumor
-2.0
745
Tumor
-2.0
977
Tumor
-2.0
663
Tumor
-2.0
981
Tumor
-2.0
635
Tumor
-2.0
661
Tumor
-2.0
131
Tumor
-2.1
123
Tumor
-2.1
665
Tumor
-2.1
387
Tumor
-2.2
957
Tumor
-2.2
471
Tumor
-2.2
443
Tumor
-2.2
647
Tumor
-2.3
851
Tumor
-2.4
1013
Tumor
-2.4
743
Tumor
-2.8
Show allShow less
LIVER CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.