We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
CFAP410 is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
17.7
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
77.5
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
58.4
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
38.3
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
37.5
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
37.2
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
32.8
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
32.0
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
30.6
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
29.8
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
27.4
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
27.1
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
25.6
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
25.6
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
24.9
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
24.5
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
24.3
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
22.3
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
19.8
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
19.3
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
18.9
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
18.6
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
18.0
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
17.9
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
17.8
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
17.4
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
16.7
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
15.8
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
15.5
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
15.3
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
15.1
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
14.8
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
14.7
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
13.8
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
13.8
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
13.3
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
13.2
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
12.5
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
12.5
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
12.5
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
11.5
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
11.4
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
11.3
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
11.2
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
11.1
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
11.1
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
10.8
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
10.6
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
10.4
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
10.3
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
9.8
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
9.7
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
9.0
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
8.2
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
7.8
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
7.8
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
7.7
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
6.7
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
6.2
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
6.1
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
5.3
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
5.1
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
4.5
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
3.9
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
CFAP410 is not prognostic in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
12.5
Number of samples
521
Samples
Sample
Description
TPM
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
53.5
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
30.8
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
30.7
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
29.9
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
27.5
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
27.3
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
25.0
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
24.9
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
24.0
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
23.9
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
23.9
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
22.8
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
22.7
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
22.7
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
22.6
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
22.6
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
22.5
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
22.5
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
22.2
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
22.1
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
22.1
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
22.1
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
22.0
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
21.7
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
21.7
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
21.5
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
21.5
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
21.4
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
21.2
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
21.2
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
21.2
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
21.1
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
20.9
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
20.7
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
20.7
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
20.6
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
20.5
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
20.4
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
20.3
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
20.1
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
20.1
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
19.8
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
19.8
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
19.7
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
19.6
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
19.4
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
19.3
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
19.3
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
19.2
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
19.2
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
19.1
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
19.1
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
19.1
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
19.1
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
19.0
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
19.0
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
18.9
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
18.9
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
18.7
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
18.6
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
18.6
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
18.4
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
18.4
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
18.2
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
18.1
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
18.1
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
18.1
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
18.1
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
18.0
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
18.0
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
18.0
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
18.0
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
17.9
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
17.9
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
17.9
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
17.9
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
17.8
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
17.7
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
17.7
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
17.6
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
17.5
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
17.4
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
17.3
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
17.3
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
17.3
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
17.2
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
17.2
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
17.2
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
17.1
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
17.1
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
16.8
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
16.8
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
16.8
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
16.7
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
16.7
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
16.7
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
16.6
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
16.5
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
16.4
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
16.4
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
16.3
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
16.2
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
16.2
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
16.1
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
16.0
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
16.0
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
16.0
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
16.0
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
15.9
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
15.8
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
15.8
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
15.8
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
15.8
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
15.8
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
15.6
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
15.5
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
15.5
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
15.5
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
15.5
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
15.5
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
15.4
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
15.4
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
15.3
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
15.1
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
15.1
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
15.1
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
15.1
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
15.1
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
15.1
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
15.0
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
15.0
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
15.0
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
15.0
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
15.0
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
14.9
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
14.9
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
14.9
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
14.8
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
14.8
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
14.8
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
14.7
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
14.7
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
14.7
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
14.6
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
14.6
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
14.6
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
14.6
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
14.6
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
14.6
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
14.6
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
14.5
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
14.5
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
14.5
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
14.5
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
14.5
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
14.4
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
14.4
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
14.4
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
14.3
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
14.3
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
14.3
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
14.3
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
14.3
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
14.2
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
14.2
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
14.2
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
14.2
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
14.1
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
14.1
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
14.1
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
14.1
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
14.0
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
14.0
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
14.0
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
13.9
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
13.9
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
13.9
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
13.8
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
13.8
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
13.8
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
13.7
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
13.7
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
13.7
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
13.7
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
13.7
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
13.6
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
13.6
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
13.6
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
13.6
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
13.5
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
13.5
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
13.5
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
13.4
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
13.4
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
13.4
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
13.4
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
13.4
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
13.4
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
13.3
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
13.3
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
13.3
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
13.3
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
13.2
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
13.2
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
13.2
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
13.2
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
13.2
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
13.1
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
13.1
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
13.1
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
13.1
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
13.1
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
13.1
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
13.0
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
13.0
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
13.0
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
13.0
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
13.0
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
12.9
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
12.9
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
12.9
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
12.9
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
12.9
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
12.8
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
12.8
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
12.8
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
12.8
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
12.8
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
12.7
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
12.7
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
12.7
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
12.7
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
12.7
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
12.6
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
12.6
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
12.6
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
12.6
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
12.5
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
12.5
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
12.5
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
12.4
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
12.4
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
12.4
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
12.4
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
12.4
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
12.4
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
12.3
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
12.3
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
12.3
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
12.3
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
12.3
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
12.3
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
12.3
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
12.2
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
12.2
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
12.1
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
12.1
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
12.1
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
12.1
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
12.0
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
12.0
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
12.0
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
12.0
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
11.9
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
11.9
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
11.9
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
11.9
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
11.9
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
11.8
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
11.7
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
11.7
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
11.7
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
11.7
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
11.7
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
11.7
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
11.7
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
11.7
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
11.6
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
11.6
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
11.6
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
11.6
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
11.6
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
11.6
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
11.6
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
11.6
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
11.5
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
11.5
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
11.5
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
11.5
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
11.4
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
11.4
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
11.4
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
11.4
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
11.4
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
11.3
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
11.3
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
11.3
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
11.2
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
11.2
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
11.2
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
11.2
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
11.2
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
11.2
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
11.2
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
11.1
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
11.0
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
11.0
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
11.0
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
11.0
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
10.9
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
10.9
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
10.9
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
10.9
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
10.9
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
10.9
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
10.8
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
10.8
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
10.8
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
10.8
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
10.8
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
10.8
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
10.8
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
10.8
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
10.7
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
10.7
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
10.7
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
10.7
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
10.7
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
10.6
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
10.6
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
10.6
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
10.6
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
10.6
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
10.5
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
10.5
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
10.4
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
10.4
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
10.4
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
10.4
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
10.4
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
10.4
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
10.3
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
10.3
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
10.3
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
10.3
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
10.3
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
10.2
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
10.2
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
10.2
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
10.2
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
10.1
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
10.1
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
10.1
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
10.1
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
10.0
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
10.0
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
10.0
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
9.9
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
9.9
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
9.9
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
9.8
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
9.8
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
9.8
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
9.8
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
9.7
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
9.7
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
9.7
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
9.7
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
9.7
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
9.7
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
9.7
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
9.6
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
9.6
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
9.5
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
9.5
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
9.5
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
9.5
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
9.4
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
9.4
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
9.4
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
9.3
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
9.3
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
9.3
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
9.3
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
9.2
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
9.2
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
9.2
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
9.1
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
9.1
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
9.1
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
9.1
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
9.1
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
9.1
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
9.0
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
9.0
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
9.0
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
9.0
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
9.0
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
9.0
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
9.0
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
9.0
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
8.9
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
8.9
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
8.9
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
8.8
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
8.8
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
8.7
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
8.7
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
8.7
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
8.7
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
8.7
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
8.6
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
8.5
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
8.5
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
8.5
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
8.5
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
8.5
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
8.5
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
8.5
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
8.4
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
8.4
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
8.4
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
8.4
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
8.4
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
8.3
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
8.3
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
8.2
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
8.2
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
8.2
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
8.2
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
8.1
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
8.1
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
8.1
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
8.1
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
8.0
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
8.0
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
7.9
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
7.8
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
7.8
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
7.8
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
7.8
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
7.8
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
7.7
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
7.7
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
7.6
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
7.6
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
7.5
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
7.5
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
7.5
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
7.5
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
7.4
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
7.4
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
7.4
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
7.4
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
7.3
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
7.3
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
7.3
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
7.2
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
7.2
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
7.1
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
7.1
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
7.1
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
6.9
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
6.9
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
6.7
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
6.6
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
6.6
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
6.5
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
6.5
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
6.5
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
6.4
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
6.3
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
6.3
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
6.2
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
6.2
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
6.1
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
6.1
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
6.1
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
6.1
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
6.0
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
5.9
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
5.9
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
5.9
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
5.9
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
5.9
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
5.9
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
5.9
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
5.9
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
5.8
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
5.8
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
5.8
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
5.8
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
5.7
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
5.7
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
5.7
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
5.5
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
5.5
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
5.5
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
5.4
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
5.4
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
5.3
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
5.3
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
5.3
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
5.2
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
5.1
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
5.0
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
5.0
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
5.0
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
5.0
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
4.8
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
4.5
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
4.3
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
4.0
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
3.9
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
3.7
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
3.6
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
3.5
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
3.3
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
2.0
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
0.8
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
CFAP410 is not prognostic in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
15.3
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
38.8
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
34.1
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
28.6
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
26.1
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
24.5
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
23.6
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
22.8
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
22.8
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
22.7
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
22.3
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
21.8
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
20.7
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
20.7
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
20.5
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
20.4
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
20.3
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
20.1
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
19.9
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
19.6
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
19.4
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
18.9
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
18.9
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
18.9
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
18.9
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
18.7
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
18.6
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
18.4
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
18.2
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
18.1
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
18.1
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
17.9
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
17.7
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
17.5
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
17.5
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
17.3
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
17.1
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
16.9
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
16.8
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
16.5
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
16.5
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
15.8
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
15.8
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
15.8
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
15.5
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
15.5
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
15.5
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
15.4
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
15.4
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
15.1
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
15.0
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
14.7
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
14.7
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
14.6
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
14.5
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
14.5
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
14.4
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
14.4
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
13.9
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
13.9
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
13.9
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
13.8
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
13.7
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
13.6
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
13.6
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
13.3
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
13.1
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
13.1
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
12.9
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
12.9
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
12.8
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
12.7
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
12.6
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
12.2
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
11.8
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
11.4
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
11.3
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
11.3
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
11.2
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
11.1
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
11.1
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
11.0
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
10.6
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
10.2
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
10.1
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
9.9
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
9.8
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
9.2
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
9.1
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
8.2
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
8.1
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
8.0
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
7.5
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
7.1
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
6.9
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
6.7
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
6.5
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
5.6
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
5.2
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
4.0
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
CFAP410 is potential prognostic, high expression is favorable in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
17.2
Number of samples
282
Samples
Sample
Description
TPM
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
45.6
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
42.5
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
41.5
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
38.8
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
36.9
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
36.3
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
34.8
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
34.2
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
34.2
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
33.9
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
33.3
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
33.1
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
33.0
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
32.8
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
32.6
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
32.4
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
32.2
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
31.5
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
31.4
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
31.1
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
31.0
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
30.9
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
30.3
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
30.3
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
29.7
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
29.6
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
29.4
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
29.4
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
27.8
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
27.5
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
27.4
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
27.2
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
27.1
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
26.9
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
26.8
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
26.8
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
26.7
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
26.6
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
26.4
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
26.4
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
26.4
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
26.1
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
25.5
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
25.3
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
25.1
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
25.1
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
25.1
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
24.8
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
24.8
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
24.6
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
24.4
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
24.2
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
24.0
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
24.0
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
23.9
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
23.9
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
23.8
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
23.6
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
23.5
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
23.4
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
23.4
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
23.3
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
23.3
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
23.1
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
22.8
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
22.7
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
22.4
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
22.2
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
22.0
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
21.9
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
21.9
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
21.6
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
21.5
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
21.5
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
21.2
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
21.1
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
21.0
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
20.9
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
20.9
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
20.8
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
20.8
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
20.8
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
20.7
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
20.7
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
20.5
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
20.5
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
20.5
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
20.4
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
20.3
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
20.1
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
20.0
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
20.0
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
20.0
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
20.0
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
19.7
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
19.6
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
19.5
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
19.5
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
19.5
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
19.4
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
19.4
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
19.4
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
19.4
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
19.2
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
19.2
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
19.2
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
19.0
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
18.9
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
18.9
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
18.8
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
18.7
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
18.7
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
18.6
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
18.5
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
18.5
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
18.5
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
18.5
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
18.4
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
18.2
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
18.1
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
18.1
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
18.0
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
17.9
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
17.9
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
17.8
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
17.8
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
17.7
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
17.7
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
17.6
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
17.5
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
17.5
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
17.5
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
17.3
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
17.3
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
17.2
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
17.1
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
16.7
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
16.7
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
16.7
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
16.6
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
16.6
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
16.5
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
16.5
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
16.4
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
16.3
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
16.3
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
16.1
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
16.0
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
16.0
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
15.9
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
15.8
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
15.8
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
15.7
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
15.7
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
15.6
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
15.5
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
15.5
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
15.5
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
15.5
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
15.4
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
15.3
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
15.2
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
15.0
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
14.9
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
14.7
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
14.6
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
14.6
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
14.3
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
14.2
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
14.2
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
14.1
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
14.0
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
14.0
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
13.6
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
13.6
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
13.6
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
13.5
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
13.4
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
13.4
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
13.4
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
13.3
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
13.2
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
13.2
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
13.2
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
13.2
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
13.1
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
13.0
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
12.8
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
12.7
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
12.7
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
12.7
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
12.6
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
12.6
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
12.6
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
12.5
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
12.5
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
12.4
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
12.4
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
12.4
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
12.4
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
12.4
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
12.3
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
12.3
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
12.1
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
12.1
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
12.1
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
12.0
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
12.0
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
12.0
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
11.9
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
11.8
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
11.6
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
11.4
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
11.4
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
11.3
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
11.3
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
11.0
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
10.9
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
10.6
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
10.5
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
10.4
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
10.4
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
10.4
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
10.2
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
10.2
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
10.0
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
9.9
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
9.8
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
9.8
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
9.7
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
9.6
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
9.5
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
9.5
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
9.5
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
9.4
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
9.3
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
9.3
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
9.1
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
9.1
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
9.0
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
8.9
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
8.9
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
8.8
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
8.5
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
8.5
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
8.2
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
8.1
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
8.0
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
8.0
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
7.9
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
7.8
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
7.5
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
7.4
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
7.3
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
7.2
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
7.2
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
7.1
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
7.1
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
7.0
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
6.9
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
6.9
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
6.8
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
6.7
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
6.7
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
6.6
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
6.5
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
6.1
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
5.8
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
5.7
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
5.7
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
5.4
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
5.4
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
5.2
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
5.1
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
4.8
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
3.9
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
3.5
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
3.0
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
0.0
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
0.0
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
0.0
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
0.0
Show allShow less
RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0011410003
Tumor
0.8
CPT0086370003
Normal
0.7
CPT0002270011
Tumor
0.7
CPT0078800003
Tumor
0.7
CPT0092160003
Tumor
0.6
CPT0092740003
Normal
0.6
CPT0001340003
Tumor
0.6
CPT0088970003
Tumor
0.5
CPT0001540009
Tumor
0.5
CPT0001550001
Normal
0.5
CPT0086360003
Tumor
0.5
CPT0001500009
Tumor
0.4
CPT0087050003
Normal
0.4
CPT0064370003
Tumor
0.4
CPT0085670003
Tumor
0.4
CPT0088630003
Tumor
0.4
CPT0069000003
Tumor
0.4
CPT0025920001
Normal
0.4
CPT0078940001
Normal
0.4
CPT0000790001
Normal
0.4
CPT0015730003
Tumor
0.3
CPT0012640003
Normal
0.3
CPT0076350001
Normal
0.3
CPT0088690003
Tumor
0.3
CPT0000660001
Normal
0.3
CPT0019130003
Tumor
0.3
CPT0014470001
Normal
0.3
CPT0023360001
Normal
0.3
CPT0092730003
Tumor
0.3
CPT0006630003
Tumor
0.3
CPT0088500001
Normal
0.3
CPT0078530001
Normal
0.3
CPT0025050003
Tumor
0.3
CPT0025230003
Tumor
0.3
CPT0081600003
Tumor
0.2
CPT0006440003
Tumor
0.2
CPT0088480003
Tumor
0.2
CPT0012900004
Tumor
0.2
CPT0086870003
Tumor
0.2
CPT0088710001
Normal
0.2
CPT0025880003
Tumor
0.2
CPT0078510003
Tumor
0.2
CPT0007320003
Tumor
0.2
CPT0026420001
Normal
0.2
CPT0026410003
Tumor
0.2
CPT0002370001
Normal
0.2
CPT0078930003
Tumor
0.2
CPT0009000003
Tumor
0.2
CPT0065810003
Tumor
0.2
CPT0064400001
Normal
0.2
CPT0075130003
Tumor
0.2
CPT0069190001
Normal
0.2
CPT0009060003
Tumor
0.2
CPT0063330001
Normal
0.2
CPT0063640001
Normal
0.2
CPT0025290003
Tumor
0.2
CPT0012370003
Tumor
0.2
CPT0092310003
Normal
0.2
CPT0088640003
Normal
0.2
CPT0088780001
Normal
0.2
CPT0009080003
Normal
0.2
CPT0025170003
Tumor
0.2
CPT0001510001
Normal
0.1
CPT0082010001
Normal
0.1
CPT0079480003
Tumor
0.1
CPT0092190003
Normal
0.1
CPT0065750003
Tumor
0.1
CPT0081990003
Tumor
0.1
CPT0012180003
Tumor
0.1
CPT0092290003
Tumor
0.1
CPT0010120001
Normal
0.1
CPT0086830003
Normal
0.1
CPT0065930003
Tumor
0.1
CPT0086890003
Normal
0.1
CPT0019160001
Normal
0.1
CPT0023350003
Tumor
0.1
CPT0010170001
Normal
0.1
CPT0012080003
Tumor
0.1
CPT0020120003
Tumor
0.1
CPT0088900003
Tumor
0.1
CPT0006950001
Normal
0.1
CPT0025610001
Normal
0.1
CPT0007870001
Normal
0.1
CPT0012090003
Normal
0.1
CPT0012770003
Normal
0.1
CPT0012280003
Tumor
0.1
CPT0012570003
Normal
0.1
CPT0084590001
Normal
0.1
CPT0081620001
Normal
0.1
CPT0081880003
Tumor
0.1
CPT0092790003
Tumor
0.1
CPT0014350001
Normal
0.1
CPT0007470001
Normal
0.1
CPT0079230003
Tumor
0.1
CPT0001230001
Normal
0.1
CPT0077310003
Tumor
0.1
CPT0000890001
Normal
0.1
CPT0012290003
Normal
0.1
CPT0017850003
Tumor
0.0
CPT0000870016
Tumor
0.0
CPT0012920003
Normal
0.0
CPT0006730001
Normal
0.0
CPT0020020001
Normal
0.0
CPT0089040001
Normal
0.0
CPT0065690003
Tumor
0.0
CPT0023710001
Normal
0.0
CPT0087040003
Tumor
0.0
CPT0015810003
Tumor
0.0
CPT0010110003
Tumor
0.0
CPT0025110003
Tumor
0.0
CPT0086970003
Normal
0.0
CPT0001220008
Tumor
0.0
CPT0014370004
Tumor
0.0
CPT0078990003
Tumor
0.0
CPT0078670001
Normal
0.0
CPT0065870003
Tumor
0.0
CPT0084560003
Tumor
0.0
CPT0079000001
Normal
0.0
CPT0000780007
Tumor
0.0
CPT0014130001
Normal
0.0
CPT0006530001
Normal
0.0
CPT0086030003
Tumor
0.0
CPT0066430001
Normal
0.0
CPT0089480003
Normal
0.0
CPT0001190001
Normal
0.0
CPT0079430001
Normal
0.0
CPT0079270003
Tumor
0.0
CPT0014160003
Tumor
0.0
CPT0024680001
Normal
0.0
CPT0025060001
Normal
0.0
CPT0065450001
Normal
0.0
CPT0077140001
Normal
0.0
CPT0066520001
Normal
0.0
CPT0069010001
Normal
0.0
CPT0077500001
Normal
0.0
CPT0088760003
Tumor
0.0
CPT0079300001
Normal
0.0
CPT0078840001
Normal
0.0
CPT0001350001
Normal
0.0
CPT0086950003
Tumor
-0.1
CPT0009020003
Normal
-0.1
CPT0078830003
Tumor
-0.1
CPT0077320001
Normal
-0.1
CPT0014450004
Tumor
-0.1
CPT0018250001
Normal
-0.1
CPT0065820001
Normal
-0.1
CPT0010160003
Tumor
-0.1
CPT0071150004
Tumor
-0.1
CPT0089460004
Tumor
-0.1
CPT0089020003
Tumor
-0.1
CPT0024670003
Tumor
-0.1
CPT0021240003
Tumor
-0.1
CPT0076330003
Tumor
-0.1
CPT0075720003
Tumor
-0.1
CPT0001260009
Tumor
-0.1
CPT0025350003
Tumor
-0.1
CPT0075570001
Normal
-0.1
CPT0012670003
Tumor
-0.1
CPT0020130001
Normal
-0.1
CPT0077490003
Tumor
-0.1
CPT0006900003
Tumor
-0.1
CPT0088920001
Normal
-0.1
CPT0002350011
Tumor
-0.1
CPT0065430003
Tumor
-0.1
CPT0023690003
Tumor
-0.1
CPT0015910003
Tumor
-0.1
CPT0079380003
Tumor
-0.1
CPT0013790003
Normal
-0.2
CPT0078660003
Tumor
-0.2
CPT0011240003
Tumor
-0.2
CPT0092800003
Normal
-0.2
CPT0086820003
Tumor
-0.2
CPT0063320003
Tumor
-0.2
CPT0017450001
Normal
-0.2
CPT0079510001
Normal
-0.2
CPT0088570001
Normal
-0.2
CPT0017410003
Tumor
-0.2
CPT0069160003
Tumor
-0.2
CPT0019990003
Tumor
-0.2
CPT0063630003
Tumor
-0.3
CPT0001270001
Normal
-0.3
CPT0075560003
Tumor
-0.3
CPT0079180003
Tumor
-0.3
CPT0000640003
Tumor
-0.3
CPT0025580004
Tumor
-0.3
CPT0088550004
Tumor
-0.3
CPT0079410003
Tumor
-0.3
CPT0066470004
Tumor
-0.4
CPT0012550003
Tumor
-0.4
CPT0007860003
Tumor
-0.5
CPT0075170001
Normal
-0.5
CPT0066480003
Tumor
-0.6
CPT0077110003
Tumor
-0.6
CPT0001180009
Tumor
-0.7
Show allShow less
RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.