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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
G6PD is validated prognostic, high expression is unfavorable in Liver Hepatocellular Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
25.0
Number of samples
362
Samples
Sample
Description
TPM
TCGA-YA-A8S7-01A
0 years, male, white, stage:Stage IIIA, dead, 412 days
439.9
TCGA-CC-A5UD-01A
0 years, male, asian, stage:Stage IIIA, dead, 304 days
261.4
TCGA-CC-A5UE-01A
0 years, male, asian, stage:Stage IIIB, dead, 272 days
257.6
TCGA-BC-A112-01A
0 years, male, white, stage:'--, dead, 153 days
207.7
TCGA-DD-A39Y-01A
0 years, male, asian, stage:Stage I, dead, 171 days
202.5
TCGA-CC-A7IJ-01A
0 years, male, asian, stage:Stage II, alive, 382 days
196.2
TCGA-DD-A4NQ-01A
0 years, male, white, stage:Stage II, dead, 373 days
195.7
TCGA-2Y-A9GY-01A
0 years, female, white, stage:Stage II, dead, 757 days
189.5
TCGA-BC-A8YO-01A
0 years, female, white, stage:Stage IIIC, alive, 562 days
189.5
TCGA-DD-A1EL-01A
0 years, male, black or african american, stage:Stage II, dead, 415 days
182.8
TCGA-CC-A1HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 101 days
182.5
TCGA-DD-AAD5-01A
0 years, male, asian, stage:Stage I, alive, 1345 days
175.5
TCGA-K7-AAU7-01A
0 years, male, white, stage:Stage II, alive, 359 days
166.9
TCGA-RC-A6M6-01A
0 years, male, white, stage:Stage II, alive, 9 days
162.2
TCGA-DD-A114-01A
0 years, male, black or african american, stage:Stage II, dead, 1149 days
144.7
TCGA-DD-AACH-01A
0 years, male, asian, stage:Stage II, dead, 195 days
135.9
TCGA-DD-AACZ-01A
0 years, female, asian, stage:Stage I, dead, 171 days
132.7
TCGA-CC-A7IG-01A
0 years, male, asian, stage:Stage II, dead, 299 days
119.1
TCGA-G3-AAV7-01A
0 years, male, asian, stage:Stage II, alive, 361 days
113.9
TCGA-BC-A10W-01A
0 years, male, asian, stage:'--, dead, 91 days
112.0
TCGA-CC-A8HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 140 days
81.7
TCGA-FV-A3I1-01A
0 years, female, white, stage:Stage II, dead, 247 days
79.9
TCGA-ZP-A9D2-01A
0 years, male, white, stage:'--, dead, 765 days
79.5
TCGA-DD-AACL-01A
0 years, female, asian, stage:Stage I, dead, 107 days
72.6
TCGA-G3-A7M9-01A
0 years, male, white, stage:Stage IIIB, dead, 56 days
71.1
TCGA-CC-A7IK-01A
0 years, male, asian, stage:Stage IIIA, dead, 262 days
69.8
TCGA-ED-A7PX-01A
0 years, female, asian, stage:Stage II, alive, 6 days
66.1
TCGA-G3-AAV5-01A
0 years, male, white, stage:Stage II, alive, 354 days
66.0
TCGA-CC-A3M9-01A
0 years, male, asian, stage:Stage IIIA, dead, 300 days
65.6
TCGA-EP-A2KA-01A
0 years, female, white, stage:Stage IIIA, dead, 627 days
65.1
TCGA-CC-A3MC-01A
0 years, male, asian, stage:Stage IIIA, alive, 363 days
64.4
TCGA-CC-5260-01A
0 years, female, asian, stage:Stage IIIC, dead, 87 days
62.0
TCGA-DD-AADB-01A
0 years, male, asian, stage:Stage I, alive, 1242 days
61.2
TCGA-2Y-A9GS-01A
0 years, male, white, stage:'--, dead, 724 days
59.3
TCGA-DD-AAD6-01A
0 years, male, asian, stage:Stage IIIA, alive, 672 days
58.4
TCGA-DD-AAC8-01A
0 years, male, asian, stage:Stage I, dead, 16 days
56.9
TCGA-DD-AA3A-01A
0 years, female, white, stage:Stage I, dead, 410 days
55.8
TCGA-GJ-A3OU-01A
0 years, male, white, stage:Stage I, alive, 879 days
55.1
TCGA-ED-A459-01A
0 years, male, asian, stage:Stage II, alive, 910 days
54.6
TCGA-DD-AACB-01A
0 years, female, asian, stage:Stage I, alive, 2324 days
54.5
TCGA-CC-5264-01A
0 years, male, asian, stage:Stage IIIA, dead, 102 days
53.1
TCGA-CC-A3MA-01A
0 years, male, asian, stage:Stage IIIA, dead, 303 days
52.3
TCGA-2Y-A9HA-01A
0 years, male, white, stage:Stage II, dead, 36 days
52.1
TCGA-CC-5263-01A
0 years, male, asian, stage:Stage IIIA, dead, 129 days
49.4
TCGA-CC-A8HV-01A
0 years, female, asian, stage:Stage II, dead, 279 days
48.5
TCGA-ED-A66Y-01A
0 years, female, asian, stage:Stage IIIA, dead, 296 days
45.5
TCGA-BC-A69H-01A
0 years, male, white, stage:Stage II, alive, 444 days
44.4
TCGA-2Y-A9H2-01A
0 years, female, white, stage:Stage I, alive, 1731 days
43.9
TCGA-DD-A1EJ-01A
0 years, female, white, stage:Stage IIIC, dead, 1005 days
42.1
TCGA-WX-AA44-01A
0 years, female, white, stage:Stage I, alive, 615 days
40.1
TCGA-CC-A3MB-01A
0 years, male, asian, stage:Stage IIIA, dead, 315 days
39.9
TCGA-5C-AAPD-01A
0 years, male, asian, stage:Stage II, alive, 20 days
39.7
TCGA-MI-A75C-01A
0 years, male, white, stage:Stage I, alive, 291 days
39.4
TCGA-FV-A4ZP-01A
0 years, male, white, stage:Stage IIIA, dead, 2486 days
39.1
TCGA-FV-A3I0-01A
0 years, female, white, stage:Stage II, alive, 848 days
36.8
TCGA-BC-A10U-01A
0 years, male, white, stage:'--, dead, 837 days
36.2
TCGA-DD-AADN-01A
0 years, male, asian, stage:Stage I, alive, 898 days
35.3
TCGA-G3-A25S-01A
0 years, male, white, stage:Stage I, dead, 416 days
34.5
TCGA-DD-A1EA-01A
0 years, male, asian, stage:Stage II, alive, 2415 days
34.2
TCGA-UB-A7MD-01A
0 years, male, black or african american, stage:Stage I, dead, 52 days
33.0
TCGA-ED-A7PZ-01A
0 years, male, asian, stage:Stage II, alive, 6 days
32.9
TCGA-CC-5262-01A
0 years, male, asian, stage:Stage IIIC, dead, 103 days
32.2
TCGA-KR-A7K7-01A
0 years, female, white, stage:Stage II, alive, 951 days
32.1
TCGA-DD-A1EG-01A
0 years, male, white, stage:Stage I, dead, 1372 days
31.5
TCGA-DD-A3A7-01A
0 years, male, stage:Stage IIIB, dead, 419 days
31.4
TCGA-DD-A3A1-01A
0 years, male, stage:Stage IIIA, dead, 233 days
30.9
TCGA-DD-A4NR-01A
0 years, female, white, stage:Stage I, dead, 9 days
30.5
TCGA-DD-AACK-01A
0 years, male, asian, stage:Stage I, alive, 9 days
30.3
TCGA-2Y-A9H0-01A
0 years, male, white, stage:Stage IIIA, alive, 3675 days
30.2
TCGA-G3-AAV1-01A
0 years, male, asian, stage:Stage IIIC, dead, 359 days
29.7
TCGA-ED-A97K-01A
0 years, male, asian, stage:Stage IIIA, alive, 6 days
29.6
TCGA-G3-A5SJ-01A
0 years, male, white, stage:Stage I, alive, 698 days
29.3
TCGA-RG-A7D4-01A
0 years, male, black or african american, stage:Stage II, alive, 1098 days
29.1
TCGA-DD-A4NB-01A
0 years, male, white, stage:Stage I, alive, 989 days
28.4
TCGA-DD-AACJ-01A
0 years, male, asian, stage:Stage II, alive, 2102 days
27.7
TCGA-FV-A496-01A
0 years, female, white, stage:Stage I, alive, 10 days
27.5
TCGA-DD-A1EI-01A
0 years, male, asian, stage:Stage I, alive, 183 days
26.8
TCGA-QA-A7B7-01A
0 years, male, black or african american, stage:Stage II, alive, 94 days
26.8
TCGA-DD-AACP-01A
0 years, male, asian, stage:Stage I, alive, 415 days
26.6
TCGA-MI-A75I-01A
0 years, male, black or african american, stage:'--, alive, 630 days
26.5
TCGA-2Y-A9GW-01A
0 years, male, white, stage:Stage I, dead, 1271 days
26.2
TCGA-WQ-A9G7-01A
0 years, female, white, stage:'--, alive, 30 days
26.2
TCGA-BD-A3EP-01A
0 years, female, black or african american, stage:Stage I, alive, 409 days
26.0
TCGA-CC-5258-01A
0 years, male, asian, stage:Stage II, dead, 129 days
26.0
TCGA-DD-AADC-01A
0 years, male, asian, stage:Stage I, dead, 425 days
25.9
TCGA-DD-AACX-01A
0 years, male, asian, stage:Stage II, alive, 170 days
25.8
TCGA-G3-A7M6-01A
0 years, female, white, stage:Stage I, alive, 632 days
25.1
TCGA-DD-AACG-01A
0 years, male, asian, stage:Stage II, dead, 469 days
25.0
TCGA-DD-AACU-01A
0 years, male, asian, stage:Stage I, alive, 1567 days
24.2
TCGA-DD-A4NA-01A
0 years, female, white, stage:Stage IIIC, alive, 1008 days
24.2
TCGA-UB-A7MF-01A
0 years, male, white, stage:Stage IIIA, dead, 214 days
23.6
TCGA-DD-AADV-01A
0 years, male, asian, stage:Stage I, alive, 574 days
23.4
TCGA-DD-A39V-01A
0 years, male, white, stage:Stage II, dead, 643 days
23.3
TCGA-DD-AAEI-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
23.2
TCGA-DD-AAE6-01A
0 years, female, asian, stage:Stage I, alive, 141 days
23.0
TCGA-HP-A5MZ-01A
0 years, male, stage:Stage I, dead, 91 days
22.9
TCGA-GJ-A9DB-01A
0 years, male, white, stage:Stage I, dead, 67 days
22.8
TCGA-ED-A82E-01A
0 years, female, asian, stage:Stage IIIA, alive, 408 days
22.7
TCGA-DD-AADD-01A
0 years, male, asian, stage:Stage I, alive, 1231 days
21.7
TCGA-CC-A8HU-01A
0 years, female, asian, stage:Stage IIIA, dead, 344 days
21.6
TCGA-K7-A5RG-01A
0 years, male, black or african american, stage:Stage I, alive, 519 days
21.4
TCGA-DD-A1EC-01A
0 years, female, white, stage:Stage I, alive, 602 days
21.3
TCGA-DD-A4NS-01A
0 years, female, white, stage:Stage I, dead, 2456 days
21.2
TCGA-DD-A1EE-01A
0 years, male, white, stage:Stage IIIA, dead, 349 days
21.1
TCGA-FV-A4ZQ-01A
0 years, male, white, stage:Stage I, alive, 12 days
21.0
TCGA-ED-A5KG-01A
0 years, female, asian, stage:Stage II, alive, 854 days
19.3
TCGA-KR-A7K8-01A
0 years, male, stage:Stage I, alive, 906 days
19.2
TCGA-EP-A3RK-01A
0 years, male, white, stage:Stage IIIA, alive, 363 days
19.2
TCGA-RC-A7SF-01A
0 years, male, asian, stage:Stage I, alive, 579 days
18.8
TCGA-CC-A7II-01A
0 years, male, asian, stage:Stage IIIA, alive, 399 days
18.7
TCGA-DD-AADW-01A
0 years, male, asian, stage:Stage I, alive, 587 days
18.7
TCGA-DD-AADR-01A
0 years, male, asian, stage:Stage I, alive, 2028 days
18.7
TCGA-ED-A7XP-01A
0 years, female, asian, stage:Stage II, alive, 400 days
18.5
TCGA-ED-A66X-01A
0 years, male, asian, stage:Stage IIIA, alive, 406 days
18.2
TCGA-5R-AA1C-01A
0 years, male, white, stage:Stage II, alive, 520 days
17.9
TCGA-DD-AAVU-01A
0 years, male, asian, stage:Stage II, alive, 2202 days
16.7
TCGA-EP-A2KC-01A
0 years, male, black or african american, stage:Stage I, dead, 19 days
16.6
TCGA-DD-AAEA-01A
0 years, male, asian, stage:Stage I, alive, 575 days
16.1
TCGA-G3-A25T-01A
0 years, female, white, stage:Stage IIIA, alive, 1553 days
16.0
TCGA-2Y-A9GX-01A
0 years, male, white, stage:Stage I, alive, 2442 days
15.8
TCGA-DD-AAD1-01A
0 years, female, asian, stage:Stage I, alive, 564 days
15.3
TCGA-CC-A9FW-01A
0 years, male, asian, stage:Stage IIIA, alive, 248 days
15.3
TCGA-DD-A4NJ-01A
0 years, female, white, stage:Stage II, alive, 928 days
15.0
TCGA-DD-AADJ-01A
0 years, female, asian, stage:Stage I, alive, 1066 days
14.9
TCGA-XR-A8TD-01A
0 years, female, white, stage:Stage IIIB, alive, 1030 days
14.9
TCGA-BC-A3KG-01A
0 years, female, white, stage:Stage II, alive, 680 days
14.7
TCGA-MR-A8JO-01A
0 years, male, white, stage:Stage I, alive, 330 days
14.5
TCGA-BC-A10Q-01A
0 years, female, white, stage:'--, dead, 1135 days
14.4
TCGA-DD-A3A6-01A
0 years, female, white, stage:Stage II, dead, 3258 days
14.3
TCGA-EP-A3JL-01A
0 years, male, white, stage:Stage I, alive, 303 days
14.3
TCGA-DD-AAVV-01A
0 years, male, asian, stage:Stage II, alive, 2455 days
14.2
TCGA-CC-5261-01A
0 years, male, asian, stage:Stage II, dead, 97 days
14.1
TCGA-DD-A118-01A
0 years, female, white, stage:Stage II, alive, 3437 days
14.0
TCGA-FV-A3R2-01A
0 years, male, white, stage:Stage I, dead, 194 days
13.7
TCGA-RC-A7S9-01A
0 years, female, asian, stage:Stage I, alive, 640 days
13.4
TCGA-BC-A10Y-01A
0 years, male, white, stage:'--, dead, 711 days
13.4
TCGA-O8-A75V-01A
0 years, male, stage:Stage I, alive, 538 days
13.3
TCGA-DD-AACQ-01A
0 years, male, asian, stage:Stage II, dead, 432 days
13.3
TCGA-BC-A3KF-01A
0 years, female, white, stage:Stage I, alive, 8 days
13.3
TCGA-DD-A1EF-01A
0 years, female, white, stage:Stage I, dead, 394 days
13.2
TCGA-ED-A8O6-01A
0 years, female, asian, stage:Stage IIIA, dead, 56 days
13.2
TCGA-G3-A25Y-01A
0 years, female, asian, stage:Stage I, dead, 452 days
13.0
TCGA-DD-A1EH-01A
0 years, male, white, stage:Stage III, alive, 1495 days
13.0
TCGA-DD-AACN-01A
0 years, male, asian, stage:Stage I, alive, 1302 days
13.0
TCGA-ZP-A9CZ-01A
0 years, male, asian, stage:'--, alive, 706 days
12.9
TCGA-G3-AAV4-01A
0 years, female, white, stage:Stage I, dead, 27 days
12.8
TCGA-DD-AACA-01A
0 years, male, asian, stage:Stage I, alive, 2301 days
12.7
TCGA-DD-A39X-01A
0 years, female, white, stage:Stage I, dead, 1694 days
12.5
TCGA-DD-AAD2-01A
0 years, male, asian, stage:Stage I, alive, 658 days
12.4
TCGA-WX-AA47-01A
0 years, female, white, stage:Stage IIIA, dead, 556 days
12.4
TCGA-DD-A4ND-01A
0 years, female, white, stage:Stage I, alive, 2746 days
12.4
TCGA-BC-A217-01A
0 years, female, white, stage:Stage II, dead, 1397 days
12.2
TCGA-G3-AAV6-01A
0 years, female, white, stage:Stage IIIA, dead, 65 days
12.0
TCGA-CC-A7IE-01A
0 years, male, asian, stage:Stage IIIA, dead, 217 days
11.9
TCGA-ZS-A9CD-01A
0 years, male, white, stage:Stage II, dead, 1386 days
11.9
TCGA-KR-A7K0-01A
0 years, male, white, stage:Stage I, dead, 65 days
11.6
TCGA-ZS-A9CF-01A
0 years, male, white, stage:Stage II, alive, 2412 days
11.6
TCGA-2Y-A9H8-01A
0 years, female, white, stage:'--, dead, 633 days
11.6
TCGA-DD-AAVQ-01A
0 years, male, asian, stage:Stage I, alive, 2728 days
11.4
TCGA-DD-A4NE-01A
0 years, female, white, stage:Stage IIIA, dead, 660 days
11.4
TCGA-DD-AACW-01A
0 years, male, asian, stage:Stage I, alive, 1424 days
11.2
TCGA-DD-A73F-01A
0 years, female, white, stage:Stage I, alive, 1085 days
11.1
TCGA-G3-AAV3-01A
0 years, female, white, stage:Stage II, alive, 412 days
10.9
TCGA-BD-A3ER-01A
0 years, male, white, stage:Stage II, alive, 1115 days
10.7
TCGA-G3-A25V-01A
0 years, male, white, stage:Stage I, alive, 860 days
10.7
TCGA-DD-AAE0-01A
0 years, female, asian, stage:Stage IIIA, alive, 555 days
10.6
TCGA-DD-A113-01A
0 years, female, white, stage:Stage II, alive, 2425 days
10.6
TCGA-BC-A10Z-01A
0 years, female, white, stage:Stage I, dead, 34 days
10.6
TCGA-DD-A1EK-01A
0 years, female, white, stage:Stage IVB, dead, 558 days
10.6
TCGA-DD-A4NN-01A
0 years, female, white, stage:Stage I, dead, 899 days
10.5
TCGA-DD-AAVP-01A
0 years, male, asian, stage:Stage I, alive, 2752 days
10.5
TCGA-K7-A6G5-01A
0 years, male, white, stage:Stage I, alive, 512 days
10.5
TCGA-RC-A6M5-01A
0 years, female, white, stage:Stage IVA, alive, 15 days
10.4
TCGA-ZP-A9CV-01A
0 years, male, white, stage:'--, dead, 1088 days
10.4
TCGA-ED-A627-01A
0 years, male, white, stage:Stage I, alive, 423 days
10.3
TCGA-DD-A73E-01A
0 years, male, white, stage:Stage I, alive, 44 days
10.3
TCGA-GJ-A6C0-01A
0 years, female, white, stage:Stage II, dead, 31 days
10.1
TCGA-MI-A75E-01A
0 years, male, white, stage:Stage IIIC, alive, 507 days
10.1
TCGA-G3-A5SM-01A
0 years, male, white, stage:Stage II, alive, 520 days
10.1
TCGA-5C-A9VG-01A
0 years, male, white, stage:Stage II, alive, 328 days
10.0
TCGA-DD-A4NH-01A
0 years, female, white, stage:Stage IIIB, alive, 917 days
9.8
TCGA-DD-AAW2-01A
0 years, male, asian, stage:Stage I, alive, 1855 days
9.8
TCGA-T1-A6J8-01A
0 years, male, white, stage:'--, alive, 23 days
9.7
TCGA-2Y-A9H4-01A
0 years, male, black or african american, stage:Stage I, alive, 1452 days
9.7
TCGA-BW-A5NO-01A
0 years, male, black or african american, stage:Stage IIIA, alive, 20 days
9.6
TCGA-CC-A9FS-01A
0 years, male, asian, stage:Stage II, alive, 211 days
9.5
TCGA-5C-A9VH-01A
0 years, male, white, stage:Stage I, alive, 322 days
9.4
TCGA-MI-A75H-01A
0 years, male, white, stage:'--, alive, 747 days
9.4
TCGA-DD-AAVY-01A
0 years, male, asian, stage:Stage IIIA, alive, 1970 days
9.4
TCGA-DD-A73A-01A
0 years, male, white, stage:Stage I, alive, 728 days
9.4
TCGA-DD-AAVS-01A
0 years, male, asian, stage:Stage I, alive, 1823 days
9.3
TCGA-DD-AACS-01A
0 years, male, asian, stage:Stage I, alive, 1804 days
9.3
TCGA-DD-AACV-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
9.2
TCGA-DD-AAVW-01A
0 years, male, asian, stage:Stage I, alive, 2317 days
9.1
TCGA-UB-A7MA-01A
0 years, female, white, stage:Stage II, alive, 848 days
9.0
TCGA-CC-A123-01A
0 years, female, asian, stage:Stage IIIA, alive, 219 days
9.0
TCGA-DD-AAW0-01A
0 years, male, asian, stage:Stage I, alive, 2015 days
9.0
TCGA-DD-AAVX-01A
0 years, male, asian, stage:Stage II, alive, 1718 days
9.0
TCGA-RC-A7SK-01A
0 years, male, asian, stage:Stage I, alive, 472 days
8.8
TCGA-DD-AADO-01A
0 years, male, asian, stage:Stage I, alive, 453 days
8.8
TCGA-FV-A3R3-01A
0 years, female, white, stage:Stage I, dead, 366 days
8.8
TCGA-G3-AAV2-01A
0 years, male, white, stage:Stage I, alive, 372 days
8.7
TCGA-CC-A7IH-01A
0 years, male, asian, stage:Stage IIIA, alive, 365 days
8.6
TCGA-XR-A8TE-01A
0 years, male, white, stage:Stage IIIA, alive, 925 days
8.5
TCGA-DD-AACC-01A
0 years, male, asian, stage:Stage I, dead, 1685 days
8.5
TCGA-G3-A25X-01A
0 years, male, asian, stage:Stage II, alive, 1779 days
8.4
TCGA-CC-A5UC-01A
0 years, male, asian, stage:Stage IIIA, dead, 347 days
8.3
TCGA-CC-A8HS-01A
0 years, male, asian, stage:Stage IIIC, dead, 300 days
8.2
TCGA-DD-AAE9-01A
0 years, male, asian, stage:Stage I, alive, 722 days
8.0
TCGA-5R-AA1D-01A
0 years, female, white, stage:Stage IIIA, alive, 449 days
8.0
TCGA-PD-A5DF-01A
0 years, female, white, stage:Stage IIIB, dead, 639 days
8.0
TCGA-DD-AACI-01A
0 years, male, asian, stage:Stage II, alive, 1618 days
7.9
TCGA-DD-AAE1-01A
0 years, male, asian, stage:Stage I, alive, 552 days
7.6
TCGA-FV-A2QR-01A
0 years, male, white, stage:Stage I, dead, 581 days
7.6
TCGA-DD-AADM-01A
0 years, male, asian, stage:Stage II, dead, 12 days
7.6
TCGA-ED-A4XI-01A
0 years, male, asian, stage:Stage II, alive, 819 days
7.6
TCGA-RC-A7SH-01A
0 years, male, asian, stage:Stage II, alive, 468 days
7.5
TCGA-DD-AADL-01A
0 years, male, asian, stage:Stage I, alive, 636 days
7.4
TCGA-LG-A6GG-01A
0 years, female, white, stage:Stage II, alive, 387 days
7.2
TCGA-DD-AADF-01A
0 years, female, asian, stage:Stage I, dead, 115 days
7.2
TCGA-DD-AAE2-01A
0 years, male, asian, stage:Stage I, alive, 638 days
7.1
TCGA-DD-AAD3-01A
0 years, male, asian, stage:Stage I, alive, 1295 days
7.1
TCGA-ED-A7XO-01A
0 years, male, asian, stage:Stage IIIA, alive, 427 days
7.1
TCGA-FV-A2QQ-01A
0 years, male, white, stage:Stage I, alive, 729 days
7.1
TCGA-FV-A23B-01A
0 years, female, white, stage:Stage II, dead, 1852 days
7.0
TCGA-DD-A3A9-01A
0 years, female, white, stage:Stage IVB, dead, 931 days
7.0
TCGA-DD-AAEK-01A
0 years, male, asian, stage:Stage II, alive, 1067 days
7.0
TCGA-5R-AAAM-01A
0 years, female, white, stage:Stage II, dead, 46 days
6.9
TCGA-UB-A7MC-01A
0 years, male, white, stage:Stage IIIA, alive, 500 days
6.9
TCGA-DD-AAW3-01A
0 years, male, asian, stage:Stage I, alive, 1633 days
6.8
TCGA-DD-AAD8-01A
0 years, female, asian, stage:Stage I, alive, 1219 days
6.8
TCGA-ZS-A9CG-01A
0 years, male, white, stage:Stage II, alive, 341 days
6.8
TCGA-DD-A39W-01A
0 years, female, white, stage:Stage III, dead, 827 days
6.8
TCGA-G3-A3CK-01A
0 years, male, asian, stage:Stage I, alive, 585 days
6.7
TCGA-UB-A7ME-01A
0 years, male, asian, stage:Stage I, alive, 486 days
6.7
TCGA-BC-A10T-01A
0 years, male, white, stage:'--, dead, 837 days
6.7
TCGA-MI-A75G-01A
0 years, male, white, stage:Stage II, alive, 698 days
6.6
TCGA-DD-A4NV-01A
0 years, male, white, stage:Stage IIIA, alive, 2398 days
6.6
TCGA-2Y-A9H5-01A
0 years, female, white, stage:Stage I, dead, 555 days
6.6
TCGA-DD-AAW1-01A
0 years, male, asian, stage:Stage IIIA, alive, 1989 days
6.4
TCGA-2Y-A9H7-01A
0 years, female, white, stage:Stage I, alive, 1168 days
6.4
TCGA-BC-A216-01A
0 years, female, white, stage:Stage IIIA, alive, 1351 days
6.4
TCGA-UB-AA0U-01A
0 years, male, white, stage:Stage II, alive, 327 days
6.3
TCGA-DD-AAD0-01A
0 years, female, asian, stage:Stage I, alive, 137 days
6.2
TCGA-DD-A11B-01A
0 years, male, white, stage:Stage I, dead, 14 days
6.2
TCGA-DD-A4NO-01A
0 years, male, white, stage:Stage I, alive, 2245 days
6.1
TCGA-G3-A25Z-01A
0 years, male, asian, stage:Stage I, alive, 655 days
6.0
TCGA-G3-A6UC-01A
0 years, male, white, stage:Stage IIIB, alive, 671 days
6.0
TCGA-DD-AACO-01A
0 years, male, asian, stage:Stage I, alive, 1876 days
5.9
TCGA-DD-AAEH-01A
0 years, male, asian, stage:Stage I, alive, 784 days
5.9
TCGA-DD-A4NF-01A
0 years, male, white, stage:Stage I, alive, 942 days
5.9
TCGA-DD-AAEG-01A
0 years, female, asian, stage:Stage I, alive, 719 days
5.8
TCGA-DD-AAVR-01A
0 years, male, asian, stage:Stage I, alive, 2513 days
5.8
TCGA-ZP-A9D1-01A
0 years, female, white, stage:'--, alive, 21 days
5.6
TCGA-WJ-A86L-01A
0 years, female, white, stage:Stage I, alive, 345 days
5.5
TCGA-RC-A7SB-01A
0 years, male, asian, stage:Stage II, alive, 588 days
5.5
TCGA-DD-A73B-01A
0 years, female, white, stage:Stage I, dead, 283 days
5.5
TCGA-DD-A115-01A
0 years, male, white, stage:Stage IIIA, dead, 2542 days
5.4
TCGA-XR-A8TG-01A
0 years, male, white, stage:Stage I, alive, 898 days
5.3
TCGA-ED-A8O5-01A
0 years, female, asian, stage:Stage IIIA, alive, 406 days
5.3
TCGA-DD-AACE-01A
0 years, male, asian, stage:Stage I, alive, 2184 days
5.3
TCGA-FV-A495-01A
0 years, female, white, stage:Stage II, alive, 1 days
5.3
TCGA-BC-A10R-01A
0 years, female, white, stage:'--, dead, 308 days
5.2
TCGA-DD-AACY-01A
0 years, male, asian, stage:Stage I, alive, 1450 days
5.2
TCGA-DD-A11C-01A
0 years, male, white, stage:Stage I, alive, 662 days
5.2
TCGA-EP-A2KB-01A
0 years, female, white, stage:Stage I, dead, 596 days
5.2
TCGA-CC-A7IL-01A
0 years, male, asian, stage:Stage IIIA, dead, 278 days
5.1
TCGA-BC-A5W4-01A
0 years, male, white, stage:Stage IIIA, dead, 547 days
5.1
TCGA-G3-A3CH-01A
0 years, male, asian, stage:Stage IIIA, alive, 780 days
5.1
TCGA-2Y-A9GZ-01A
0 years, female, white, stage:Stage II, dead, 848 days
5.1
TCGA-DD-AADI-01A
0 years, female, asian, stage:Stage I, alive, 1085 days
5.0
TCGA-2Y-A9H6-01A
0 years, female, white, stage:Stage I, alive, 357 days
5.0
TCGA-DD-AADP-01A
0 years, male, asian, stage:Stage I, alive, 458 days
4.9
TCGA-G3-A3CI-01A
0 years, male, white, stage:Stage I, alive, 180 days
4.9
TCGA-DD-AAEE-01A
0 years, male, asian, stage:Stage I, alive, 810 days
4.9
TCGA-3K-AAZ8-01A
0 years, male, black or african american, stage:Stage IIIB, alive, 396 days
4.8
TCGA-G3-A7M7-01A
0 years, male, white, stage:Stage I, alive, 361 days
4.8
TCGA-4R-AA8I-01A
0 years, male, white, stage:Stage II, dead, 262 days
4.7
TCGA-G3-A7M5-01A
0 years, male, asian, stage:Stage I, alive, 447 days
4.7
TCGA-2Y-A9GT-01A
0 years, male, white, stage:Stage I, dead, 1624 days
4.7
TCGA-BC-A10S-01A
0 years, male, white, stage:'--, dead, 1423 days
4.6
TCGA-XR-A8TC-01A
0 years, female, white, stage:Stage I, alive, 1339 days
4.5
TCGA-2Y-A9HB-01A
0 years, male, stage:Stage I, alive, 260 days
4.5
TCGA-BC-A110-01A
0 years, female, black or african american, stage:'--, dead, 2116 days
4.4
TCGA-BC-A69I-01A
0 years, male, white, stage:Stage I, alive, 387 days
4.4
TCGA-UB-A7MB-01A
0 years, male, white, stage:Stage II, alive, 601 days
4.4
TCGA-DD-AAVZ-01A
0 years, male, asian, stage:Stage I, alive, 1900 days
4.3
TCGA-2Y-A9H3-01A
0 years, male, white, stage:Stage II, alive, 1516 days
4.3
TCGA-G3-AAV0-01A
0 years, male, asian, stage:Stage I, alive, 476 days
4.2
TCGA-DD-AADA-01A
0 years, female, asian, stage:Stage I, alive, 1233 days
4.2
TCGA-2Y-A9H1-01A
0 years, male, white, stage:Stage I, dead, 1229 days
4.2
TCGA-G3-A5SL-01A
0 years, male, white, stage:Stage II, alive, 621 days
4.2
TCGA-DD-AADG-01A
0 years, male, asian, stage:Stage IIIA, alive, 1145 days
4.1
TCGA-ZP-A9CY-01A
0 years, female, white, stage:'--, alive, 782 days
4.1
TCGA-2Y-A9H9-01A
0 years, male, white, stage:Stage I, alive, 697 days
4.1
TCGA-G3-A3CG-01A
0 years, male, white, stage:Stage I, alive, 673 days
4.1
TCGA-DD-A73G-01A
0 years, female, white, stage:Stage I, alive, 3478 days
4.0
TCGA-LG-A9QC-01A
0 years, male, white, stage:Stage I, alive, 425 days
3.9
TCGA-K7-A5RF-01A
0 years, male, white, stage:Stage I, alive, 631 days
3.9
TCGA-HP-A5N0-01A
0 years, female, stage:'--, dead, 752 days
3.9
TCGA-G3-A5SI-01A
0 years, male, asian, stage:Stage II, dead, 768 days
3.9
TCGA-DD-A3A5-01A
0 years, female, white, stage:Stage III, dead, 3125 days
3.8
TCGA-ZP-A9D0-01A
0 years, female, black or african american, stage:'--, alive, 1091 days
3.8
TCGA-DD-AADU-01A
0 years, male, asian, stage:Stage II, alive, 554 days
3.8
TCGA-DD-AACD-01A
0 years, male, asian, stage:Stage I, dead, 381 days
3.8
TCGA-NI-A8LF-01A
0 years, male, white, stage:Stage I, alive, 799 days
3.8
TCGA-DD-AADK-01A
0 years, female, asian, stage:Stage II, alive, 1049 days
3.7
TCGA-CC-5259-01A
0 years, female, asian, stage:Stage IIIC, alive, 250 days
3.7
TCGA-XR-A8TF-01A
0 years, male, white, stage:Stage I, dead, 693 days
3.7
TCGA-CC-A7IF-01A
0 years, male, asian, stage:Stage IIIA, dead, 649 days
3.7
TCGA-DD-AADQ-01A
0 years, male, asian, stage:Stage II, alive, 436 days
3.6
TCGA-DD-A39Z-01A
0 years, female, stage:Stage II, dead, 601 days
3.5
TCGA-DD-A3A3-01A
0 years, male, asian, stage:Stage I, dead, 535 days
3.5
TCGA-ED-A7PY-01A
0 years, female, asian, stage:Stage II, alive, 390 days
3.4
TCGA-DD-A11D-01A
0 years, female, white, stage:Stage I, dead, 1560 days
3.4
TCGA-UB-AA0V-01A
0 years, female, white, stage:Stage I, alive, 314 days
3.4
TCGA-2Y-A9GV-01A
0 years, female, white, stage:Stage I, dead, 2532 days
3.4
TCGA-DD-A73D-01A
0 years, female, white, stage:Stage II, alive, 693 days
3.3
TCGA-DD-A4NK-01A
0 years, female, white, stage:Stage IIIA, dead, 1210 days
3.3
TCGA-EP-A12J-01A
0 years, male, black or african american, stage:Stage I, alive, 570 days
3.3
TCGA-DD-A119-01A
0 years, male, asian, stage:Stage IV, dead, 223 days
3.3
TCGA-BD-A2L6-01A
0 years, male, white, stage:'--, alive, 1363 days
3.3
TCGA-MR-A520-01A
0 years, male, white, stage:Stage I, alive, 229 days
3.3
TCGA-BC-A10X-01A
0 years, female, white, stage:Stage IIIA, dead, 770 days
3.3
TCGA-WQ-AB4B-01A
0 years, male, white, stage:Stage II, alive, 395 days
3.3
TCGA-G3-A7M8-01A
0 years, male, asian, stage:Stage I, alive, 430 days
3.2
TCGA-DD-A116-01A
0 years, male, asian, stage:Stage IIIA, dead, 1622 days
3.2
TCGA-2Y-A9GU-01A
0 years, female, white, stage:Stage I, alive, 1939 days
3.1
TCGA-DD-AACF-01A
0 years, male, asian, stage:Stage I, dead, 365 days
3.1
TCGA-DD-A73C-01A
0 years, female, white, stage:Stage IIIA, alive, 701 days
3.0
TCGA-DD-AACT-01A
0 years, female, asian, stage:Stage I, alive, 1562 days
3.0
TCGA-DD-AADY-01A
0 years, female, asian, stage:Stage I, alive, 555 days
3.0
TCGA-KR-A7K2-01A
0 years, male, white, stage:Stage I, alive, 829 days
2.9
TCGA-DD-AAE7-01A
0 years, male, asian, stage:Stage I, alive, 644 days
2.9
TCGA-DD-A3A8-01A
0 years, male, white, stage:Stage II, dead, 11 days
2.9
TCGA-DD-AAE4-01A
0 years, female, asian, stage:Stage I, alive, 608 days
2.9
TCGA-RC-A6M4-01A
0 years, female, white, stage:Stage IIIA, alive, 22 days
2.8
TCGA-LG-A9QD-01A
0 years, male, white, stage:Stage IIIA, alive, 366 days
2.8
TCGA-DD-AAED-01A
0 years, male, asian, stage:Stage I, alive, 763 days
2.6
TCGA-DD-A4NG-01A
0 years, male, white, stage:Stage IIIA, dead, 802 days
2.5
TCGA-EP-A26S-01A
0 years, male, white, stage:Stage I, alive, 608 days
2.5
TCGA-G3-AAUZ-01A
0 years, male, stage:Stage I, alive, 480 days
2.4
TCGA-DD-A4NI-01A
0 years, male, white, stage:Stage II, alive, 816 days
2.4
TCGA-DD-A1ED-01A
0 years, male, white, stage:Stage I, alive, 2301 days
2.4
TCGA-DD-AAC9-01A
0 years, male, asian, stage:Stage I, alive, 347 days
2.3
TCGA-DD-AAE3-01A
0 years, male, asian, stage:Stage I, alive, 566 days
2.3
TCGA-DD-A4NL-01A
0 years, male, white, stage:Stage I, alive, 1711 days
2.2
TCGA-DD-A4NP-01A
0 years, male, white, stage:Stage I, alive, 3308 days
2.2
TCGA-G3-A25U-01A
0 years, female, asian, stage:Stage I, alive, 1636 days
2.2
TCGA-NI-A4U2-01A
0 years, male, white, stage:Stage IIIA, dead, 1791 days
2.2
TCGA-ZP-A9D4-01A
0 years, female, white, stage:'--, alive, 395 days
2.2
TCGA-DD-A3A4-01A
0 years, male, white, stage:Stage IIIA, dead, 612 days
2.2
TCGA-ES-A2HS-01A
0 years, male, white, stage:Stage I, dead, 688 days
1.9
TCGA-ES-A2HT-01A
0 years, male, black or african american, stage:Stage I, dead, 438 days
1.9
TCGA-WX-AA46-01A
0 years, male, white, stage:Stage II, alive, 756 days
1.8
TCGA-DD-AAEB-01A
0 years, male, asian, stage:Stage I, alive, 478 days
1.7
TCGA-DD-A1EB-01A
0 years, female, stage:Stage I, alive, 2017 days
1.7
TCGA-ZS-A9CE-01A
0 years, female, white, stage:Stage II, alive, 1241 days
1.6
TCGA-DD-AADS-01A
0 years, male, asian, stage:Stage I, alive, 474 days
1.5
TCGA-G3-A3CJ-01A
0 years, male, american indian or alaska native, stage:Stage II, alive, 594 days
1.5
TCGA-G3-A5SK-01A
0 years, male, white, stage:Stage I, alive, 744 days
1.3
TCGA-DD-A3A2-01A
0 years, female, white, stage:Stage I, dead, 2131 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
G6PD is validated prognostic, high expression is unfavorable in Liver Hepatocellular Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
22.9
Number of samples
231
Samples
Sample
Description
TPM
DO50829
0 years, male, NA, stage:3, alive, 570 days
480.8
DO23519
0 years, male, NA, stage:3, alive, 630 days
337.7
DO45283
0 years, male, NA, stage:3, alive, 510 days
331.8
DO45093
0 years, male, NA, stage:2, dead, 720 days
200.0
DO45145
0 years, male, NA, stage:3, dead, 60 days
189.7
DO45267
0 years, male, NA, stage:3, dead, 570 days
175.0
DO45269
0 years, male, NA, stage:3, alive, 750 days
110.8
DO23521
0 years, male, NA, stage:3, alive, 1110 days
88.3
DO23526
0 years, male, NA, stage:3, alive, 1050 days
85.2
DO45205
0 years, female, NA, stage:2, dead, 90 days
76.7
DO23525
0 years, male, NA, stage:4, alive, 1050 days
71.8
DO45277
0 years, male, NA, stage:3, alive, 600 days
67.9
DO50778
0 years, male, NA, stage:4, alive, 630 days
63.0
DO45275
0 years, male, NA, stage:3, dead, 10 days
62.3
DO48723
0 years, male, NA, stage:1, alive, 600 days
60.3
DO45185
0 years, male, NA, stage:2, alive, 600 days
53.8
DO23508
0 years, female, NA, stage:2, alive, 390 days
51.8
DO45307
0 years, female, NA, stage:4, dead, 240 days
50.7
DO45139
0 years, male, NA, stage:3, alive, 1320 days
48.3
DO23523
0 years, male, NA, stage:3, alive, 1080 days
48.0
DO48728
0 years, female, NA, stage:2, alive, 150 days
44.4
DO45219
0 years, male, NA, stage:2, alive, 1080 days
43.1
DO50799
0 years, female, NA, stage:2, alive, 540 days
40.9
DO23511
0 years, female, NA, stage:3, dead, 180 days
39.8
DO23510
0 years, female, NA, stage:2, alive, 870 days
39.7
DO45211
0 years, male, NA, stage:3, alive, 240 days
39.3
DO45221
0 years, female, NA, stage:4, dead, 390 days
38.6
DO45092
0 years, male, NA, stage:4, dead, 1200 days
38.5
DO45245
0 years, female, NA, stage:2, dead, 240 days
37.9
DO48717
0 years, male, NA, stage:4, dead, 180 days
37.6
DO45135
0 years, male, NA, stage:1, alive, 1410 days
37.6
DO48747
0 years, male, NA, stage:3, alive, 540 days
33.3
DO45297
0 years, female, NA, stage:4, dead, 1260 days
33.2
DO48697
0 years, female, NA, stage:2, dead, 810 days
33.0
DO45225
0 years, male, NA, stage:1, alive, 1050 days
32.3
DO45217
0 years, female, NA, stage:3, dead, 270 days
30.4
DO23540
0 years, male, NA, stage:1, alive, 750 days
29.9
DO48704
0 years, female, NA, stage:3, alive, 750 days
29.7
DO48732
0 years, male, NA, stage:3, alive, 630 days
28.3
DO23547
0 years, male, NA, stage:1, alive, 1020 days
28.3
DO23542
0 years, male, NA, stage:3, alive, 960 days
28.2
DO48751
0 years, male, NA, stage:2, dead, 480 days
27.8
DO48757
0 years, female, NA, stage:3, alive, 480 days
27.7
DO45161
0 years, male, NA, stage:2, dead, 540 days
27.6
DO45131
0 years, male, NA, stage:4, dead, 360 days
27.3
DO48730
0 years, female, NA, stage:2, alive, 630 days
27.2
DO45155
0 years, male, NA, stage:2, alive, 2160 days
26.4
DO50859
0 years, male, NA, stage:2, alive, 180 days
26.2
DO45113
0 years, male, NA, stage:3, alive, 1560 days
25.8
DO45173
0 years, male, NA, stage:3, alive, 1170 days
25.4
DO45157
0 years, male, NA, stage:2, alive, 1980 days
25.1
DO45273
0 years, male, NA, stage:2, alive, 480 days
25.0
DO45149
0 years, female, NA, stage:2, alive, 1260 days
24.6
DO48682
0 years, female, NA, stage:3, dead, 120 days
24.2
DO50806
0 years, male, NA, stage:4, alive, 540 days
24.1
DO45265
0 years, male, NA, stage:3, alive, 1020 days
23.8
DO50785
0 years, male, NA, stage:4, dead, 90 days
23.3
DO45165
0 years, male, NA, stage:2, alive, 690 days
22.9
DO48725
0 years, male, NA, stage:1, alive, 780 days
22.8
DO45169
0 years, male, NA, stage:3, alive, 1350 days
22.3
DO45299
0 years, female, NA, stage:1, alive, 1440 days
21.4
DO50850
0 years, male, NA, stage:3, alive, 720 days
21.4
DO23549
0 years, male, NA, stage:3, alive, 990 days
21.1
DO50845
0 years, male, NA, stage:3, alive, 210 days
21.0
DO48700
0 years, female, NA, stage:2, alive, 810 days
20.4
DO50791
0 years, female, NA, stage:1, dead, 480 days
20.3
DO50805
0 years, male, NA, stage:2, alive, 690 days
19.8
DO50808
0 years, male, NA, stage:2, alive, 570 days
19.2
DO50809
0 years, male, NA, stage:3, dead, 720 days
19.2
DO23509
0 years, male, NA, stage:3, dead, 780 days
18.7
DO45287
0 years, male, NA, stage:1, alive, 390 days
18.6
DO45123
0 years, female, NA, stage:2, dead, 570 days
18.4
DO23535
0 years, male, NA, stage:1, alive, 960 days
18.3
DO50802
0 years, male, NA, stage:2, alive, 930 days
18.2
DO45163
0 years, male, NA, stage:2, alive, 960 days
18.1
DO45209
0 years, male, NA, stage:4, alive, 1350 days
16.2
DO45259
0 years, male, NA, stage:3, alive, 330 days
16.1
DO45305
0 years, male, NA, stage:4, alive, 300 days
15.6
DO23545
0 years, male, NA, stage:2, dead, 570 days
15.3
DO48720
0 years, female, NA, stage:2, alive, 570 days
15.3
DO45143
0 years, male, NA, stage:3, alive, 1290 days
15.3
DO48679
0 years, male, NA, stage:2, alive, 1200 days
15.2
DO48715
0 years, female, NA, stage:2, dead, 690 days
15.1
DO45237
0 years, male, NA, stage:2, alive, 900 days
14.9
DO50840
0 years, male, NA, stage:2, alive, 330 days
14.8
DO45239
0 years, male, NA, stage:2, alive, 870 days
14.3
DO45281
0 years, male, NA, stage:4, alive, 750 days
14.1
DO45199
0 years, female, NA, stage:2, alive, 1350 days
13.7
DO48716
0 years, male, NA, stage:2, alive, 720 days
13.7
DO45137
0 years, male, NA, stage:1, alive, 1320 days
12.8
DO45303
0 years, female, NA, stage:3, alive, 990 days
12.3
DO23533
0 years, male, NA, stage:2, alive, 900 days
12.3
DO45279
0 years, male, NA, stage:3, alive, 1290 days
11.9
DO23530
0 years, male, NA, stage:4, dead, 180 days
11.7
DO23546
0 years, male, NA, stage:2, alive, 1050 days
11.7
DO23513
0 years, male, NA, stage:3, alive, 1200 days
11.6
DO45127
0 years, male, NA, stage:3, dead, 420 days
11.5
DO50815
0 years, male, NA, stage:3, alive, 150 days
11.4
DO50820
0 years, female, NA, stage:3, alive, 510 days
11.3
DO23514
0 years, male, NA, stage:2, alive, 1290 days
11.2
DO23537
0 years, male, NA, stage:2, dead, 900 days
11.1
DO48737
0 years, male, NA, stage:1, alive, 720 days
11.0
DO45231
0 years, male, NA, stage:2, alive, 930 days
11.0
DO45183
0 years, female, NA, stage:2, dead, 570 days
11.0
DO45223
0 years, male, NA, stage:4, alive, 1020 days
10.7
DO50822
0 years, male, NA, stage:2, alive, 510 days
10.7
DO45141
0 years, male, NA, stage:2, alive, 1320 days
10.6
DO48681
0 years, male, NA, stage:2, alive, 900 days
10.6
DO23539
0 years, male, NA, stage:1, alive, 1110 days
10.4
DO45289
0 years, female, NA, stage:3, alive, 360 days
10.4
DO48743
0 years, female, NA, stage:2, alive, 570 days
10.2
DO45285
0 years, male, NA, stage:3, alive, 480 days
10.1
DO45257
0 years, male, NA, stage:3, alive, 810 days
10.0
DO45253
0 years, male, NA, stage:2, alive, 870 days
9.7
DO45301
0 years, male, NA, stage:2, dead, 1440 days
9.6
DO50800
0 years, male, NA, stage:2, alive, 510 days
9.6
DO45235
0 years, female, NA, stage:1, alive, 900 days
9.6
DO45175
0 years, male, NA, stage:2, alive, 1140 days
9.5
DO50819
0 years, female, NA, stage:2, alive, 510 days
9.5
DO45249
0 years, male, NA, stage:1, alive, 630 days
9.3
DO23524
0 years, female, NA, stage:2, alive, 1050 days
9.3
DO45105
0 years, male, NA, stage:1, alive, 1680 days
9.0
DO50803
0 years, female, NA, stage:1, alive, 540 days
8.9
DO227801
0 years, female, NA, stage:1, alive, 660 days
8.9
DO45251
0 years, female, NA, stage:2, alive, 900 days
8.8
DO45243
0 years, female, NA, stage:3, alive, 930 days
8.8
DO45229
0 years, male, NA, stage:1, alive, 990 days
8.7
DO50855
0 years, male, NA, stage:2, alive, 570 days
8.6
DO45119
0 years, male, NA, stage:3, dead, 510 days
8.4
DO50825
0 years, male, NA, stage:2, alive, 390 days
8.4
DO48761
0 years, male, NA, stage:2, alive, 870 days
8.4
DO23543
0 years, male, NA, stage:2, alive, 1020 days
8.3
DO50832
0 years, male, NA, stage:3, alive, 90 days
8.3
DO48712
0 years, male, NA, stage:2, alive, 810 days
8.3
DO23516
0 years, male, NA, stage:3, dead, 20 days
8.1
DO23541
0 years, male, NA, stage:2, alive, 930 days
8.1
DO50793
0 years, male, NA, stage:4, alive, 540 days
7.9
DO48695
0 years, male, NA, stage:2, alive, 720 days
7.9
DO45097
0 years, male, NA, stage:3, alive, 1620 days
7.7
DO45191
0 years, female, NA, stage:2, alive, 1200 days
7.5
DO45255
0 years, male, NA, stage:3, alive, 720 days
7.2
DO48693
0 years, male, NA, stage:2, alive, 900 days
7.2
DO45153
0 years, female, NA, stage:2, alive, 1380 days
7.2
DO45091
0 years, male, NA, stage:2, dead, 1320 days
7.1
DO48727
0 years, female, NA, stage:2, dead, 390 days
7.1
DO50787
0 years, male, NA, stage:3, alive, 480 days
7.0
DO45171
0 years, male, NA, stage:3, alive, 600 days
6.9
DO23515
0 years, male, NA, stage:2, alive, 1230 days
6.9
DO50798
0 years, male, NA, stage:3, dead, 30 days
6.6
DO45197
0 years, male, NA, stage:2, alive, 1170 days
6.6
DO50817
0 years, male, NA, stage:2, alive, 390 days
6.5
DO48736
0 years, female, NA, stage:1, alive, 600 days
6.4
DO45115
0 years, male, NA, stage:2, alive, 840 days
6.3
DO45125
0 years, male, NA, stage:3, alive, 1680 days
6.3
DO50776
0 years, male, NA, stage:1, alive, 690 days
6.3
DO45103
0 years, male, NA, stage:3, alive, 450 days
6.3
DO23544
0 years, male, NA, stage:2, alive, 960 days
6.3
DO45241
0 years, male, NA, stage:1, alive, 1080 days
6.1
DO45117
0 years, female, NA, stage:2, dead, 1110 days
6.1
DO45095
0 years, male, NA, stage:2, alive, 1620 days
6.1
DO23534
0 years, male, NA, stage:2, alive, 840 days
5.9
DO48733
0 years, male, NA, stage:2, alive, 600 days
5.8
DO48719
0 years, male, NA, stage:2, alive, 690 days
5.8
DO23529
0 years, male, NA, stage:4, alive, 930 days
5.8
DO23528
0 years, female, NA, stage:2, alive, 1020 days
5.7
DO45203
0 years, female, NA, stage:2, alive, 1170 days
5.7
DO23532
0 years, female, NA, stage:1, alive, 960 days
5.7
DO45099
0 years, male, NA, stage:3, alive, 1590 days
5.7
DO45263
0 years, male, NA, stage:3, dead, 270 days
5.7
DO48701
0 years, male, NA, stage:2, alive, 780 days
5.4
DO48672
0 years, male, NA, stage:2, alive, 450 days
5.3
DO23552
0 years, female, NA, stage:1, alive, 810 days
5.2
DO45233
0 years, male, NA, stage:3, alive, 900 days
5.1
DO45179
0 years, female, NA, stage:2, alive, 600 days
5.1
DO45187
0 years, female, NA, stage:1, alive, 1260 days
5.1
DO50814
0 years, male, NA, stage:3, alive, 420 days
5.0
DO23550
0 years, male, NA, stage:1, alive, 990 days
5.0
DO45101
0 years, male, NA, stage:2, alive, 1680 days
5.0
DO45177
0 years, female, NA, stage:3, alive, 1260 days
4.9
DO50813
0 years, male, NA, stage:2, alive, 420 days
4.9
DO45159
0 years, male, NA, stage:3, alive, 1470 days
4.8
DO45189
0 years, female, NA, stage:2, alive, 1200 days
4.7
DO23536
0 years, male, NA, stage:2, alive, 930 days
4.7
DO45261
0 years, male, NA, stage:3, alive, 990 days
4.7
DO50783
0 years, male, NA, stage:3, alive, 480 days
4.7
DO48759
0 years, male, NA, stage:3, alive, 720 days
4.6
DO45213
0 years, male, NA, stage:1, alive, 1200 days
4.6
DO50774
0 years, female, NA, stage:2, alive, 720 days
4.6
DO23548
0 years, female, NA, stage:1, alive, 840 days
4.6
DO45121
0 years, male, NA, stage:3, alive, 1530 days
4.5
DO45201
0 years, male, NA, stage:1, alive, 900 days
4.4
DO45094
0 years, male, NA, stage:3, alive, 1650 days
4.4
DO45193
0 years, female, NA, stage:4, dead, 120 days
4.4
DO45109
0 years, male, NA, stage:2, alive, 1590 days
4.4
DO45096
0 years, male, NA, stage:2, dead, 1290 days
4.3
DO45181
0 years, female, NA, stage:2, alive, 1200 days
4.3
DO45107
0 years, female, NA, stage:2, alive, 1710 days
4.2
DO50816
0 years, male, NA, stage:2, alive, 390 days
4.1
DO48706
0 years, male, NA, stage:2, alive, 870 days
4.0
DO50811
0 years, male, NA, stage:1, alive, 450 days
4.0
DO48741
0 years, male, NA, stage:3, alive, 240 days
3.9
DO23512
0 years, male, NA, stage:1, alive, 1260 days
3.6
DO50807
0 years, male, NA, stage:1, alive, 540 days
3.5
DO45129
0 years, male, NA, stage:3, alive, 1470 days
3.4
DO50789
0 years, female, NA, stage:2, alive, 570 days
3.4
DO45133
0 years, male, NA, stage:3, dead, 660 days
3.3
DO50818
0 years, male, NA, stage:2, alive, 510 days
3.2
DO50857
0 years, male, NA, stage:2, alive, 210 days
3.2
DO48721
0 years, female, NA, stage:1, alive, 900 days
3.1
DO48677
0 years, male, NA, stage:3, alive, 1140 days
3.1
DO23527
0 years, male, NA, stage:1, alive, 1050 days
2.9
DO48742
0 years, male, NA, stage:2, alive, 600 days
2.9
DO23551
0 years, male, NA, stage:3, dead, 150 days
2.9
DO45247
0 years, female, NA, stage:2, alive, 210 days
2.9
DO50839
0 years, female, NA, stage:3, alive, 330 days
2.9
DO45207
0 years, male, NA, stage:1, alive, 1050 days
2.8
DO48760
0 years, female, NA, stage:2, alive, 690 days
2.8
DO23518
0 years, male, NA, stage:2, alive, 1320 days
2.7
DO50844
0 years, male, NA, stage:4, alive, 300 days
2.6
DO23531
0 years, female, NA, stage:3, alive, 900 days
2.6
DO23517
0 years, male, NA, stage:2, alive, 1200 days
2.0
DO45167
0 years, male, NA, stage:2, dead, 1440 days
2.0
DO45215
0 years, male, NA, stage:2, alive, 1170 days
1.9
DO50804
0 years, male, NA, stage:2, alive, 720 days
1.8
DO45227
0 years, female, NA, stage:2, alive, 1020 days
1.7
DO45195
0 years, male, NA, stage:1, alive, 390 days
1.6
DO48674
0 years, male, NA, stage:2, alive, 1260 days
1.5
DO227643
0 years, male, NA, stage:2, alive, 1260 days
1.5
DO48746
0 years, male, NA, stage:3, alive, 570 days
1.4
DO45111
0 years, male, NA, stage:2, alive, 1590 days
1.3
DO23538
0 years, male, NA, stage:2, alive, 450 days
0.9
Show allShow less
LIVER HEPATOCELLULAR CARCINOMA - Protein relative expression (CPTAC)
Number of samples
330
Samples
Sample ID
Sample type
nRPX
427
Tumor
2.5
567
Tumor
2.2
685
Tumor
1.9
535
Tumor
1.7
313
Tumor
1.6
537
Tumor
1.6
367
Tumor
1.6
267
Tumor
1.5
573
Tumor
1.5
375
Tumor
1.4
311
Tumor
1.4
925
Tumor
1.3
112
Tumor
1.1
391
Tumor
1.1
351
Tumor
1.0
923
Tumor
1.0
331
Tumor
1.0
491
Tumor
0.9
127
Tumor
0.9
283
Tumor
0.9
135
Tumor
0.8
125
Tumor
0.8
483
Tumor
0.7
211
Tumor
0.7
663
Tumor
0.7
951
Tumor
0.6
525
Tumor
0.6
1021
Tumor
0.6
257
Tumor
0.6
533
Tumor
0.5
661
Tumor
0.5
231
Tumor
0.5
911
Tumor
0.5
917
Tumor
0.5
387
Tumor
0.4
285
Tumor
0.4
724
Normal
0.4
1027
Tumor
0.4
421
Tumor
0.3
217
Tumor
0.3
343
Tumor
0.3
161
Tumor
0.3
145
Tumor
0.3
913
Tumor
0.2
983
Tumor
0.2
865
Tumor
0.2
191
Tumor
0.2
953
Tumor
0.2
965
Tumor
0.2
813
Tumor
0.2
563
Tumor
0.2
527
Tumor
0.2
877
Tumor
0.1
473
Tumor
0.1
713
Tumor
0.1
671
Tumor
0.1
383
Tumor
0.1
814
Normal
0.1
428
Normal
0.0
413
Tumor
0.0
727
Tumor
0.0
1013
Tumor
0.0
113
Tumor
0.0
815
Tumor
0.0
568
Normal
0.0
851
Tumor
0.0
745
Tumor
-0.1
192
Normal
-0.1
497
Tumor
-0.1
314
Normal
-0.1
187
Tumor
-0.1
665
Tumor
-0.1
213
Tumor
-0.1
571
Tumor
-0.1
1041
Tumor
-0.1
617
Tumor
-0.1
641
Tumor
-0.1
185
Tumor
-0.2
141
Tumor
-0.2
467
Tumor
-0.2
574
Normal
-0.2
385
Tumor
-0.2
697
Tumor
-0.2
195
Tumor
-0.2
224
Normal
-0.2
261
Tumor
-0.2
957
Tumor
-0.2
171
Tumor
-0.2
498
Normal
-0.3
536
Normal
-0.3
743
Tumor
-0.3
857
Tumor
-0.3
447
Tumor
-0.3
223
Tumor
-0.3
395
Tumor
-0.3
817
Tumor
-0.3
312
Normal
-0.3
444
Normal
-0.3
1043
Tumor
-0.3
297
Tumor
-0.3
332
Normal
-0.3
517
Tumor
-0.3
435
Tumor
-0.3
268
Normal
-0.4
564
Normal
-0.4
262
Normal
-0.4
755
Tumor
-0.4
451
Tumor
-0.4
126
Normal
-0.4
368
Normal
-0.4
463
Tumor
-0.4
147
Tumor
-0.4
434
Normal
-0.4
384
Normal
-0.4
363
Tumor
-0.4
557
Tumor
-0.4
188
Normal
-0.4
492
Normal
-0.4
978
Normal
-0.4
366
Normal
-0.4
478
Normal
-0.4
943
Tumor
-0.4
424
Normal
-0.4
538
Normal
-0.4
227
Tumor
-0.4
963
Tumor
-0.4
883
Tumor
-0.4
558
Normal
-0.5
365
Tumor
-0.5
455
Tumor
-0.5
721
Tumor
-0.5
386
Normal
-0.5
361
Tumor
-0.5
284
Normal
-0.5
487
Tumor
-0.5
146
Normal
-0.5
977
Tumor
-0.5
376
Normal
-0.5
572
Normal
-0.5
414
Normal
-0.5
272
Normal
-0.5
916
Normal
-0.5
433
Tumor
-0.5
221
Tumor
-0.5
737
Tumor
-0.5
647
Tumor
-0.5
423
Tumor
-0.5
477
Tumor
-0.6
493
Tumor
-0.6
863
Tumor
-0.6
124
Normal
-0.6
137
Tumor
-0.6
715
Tumor
-0.6
131
Tumor
-0.6
823
Tumor
-0.6
352
Normal
-0.6
422
Normal
-0.6
138
Normal
-0.6
975
Tumor
-0.6
298
Normal
-0.6
524
Normal
-0.6
394
Normal
-0.6
426
Normal
-0.6
277
Tumor
-0.6
516
Normal
-0.6
362
Normal
-0.6
852
Normal
-0.6
966
Normal
-0.6
672
Normal
-0.6
523
Tumor
-0.6
976
Normal
-0.6
741
Tumor
-0.6
662
Normal
-0.7
212
Normal
-0.7
695
Tumor
-0.7
114
Normal
-0.7
128
Normal
-0.7
278
Normal
-0.7
111
Normal
-0.7
396
Normal
-0.7
488
Normal
-0.7
816
Normal
-0.7
716
Normal
-0.7
686
Normal
-0.7
881
Tumor
-0.7
232
Normal
-0.7
228
Normal
-0.7
328
Normal
-0.7
926
Normal
-0.7
778
Normal
-0.7
392
Normal
-0.7
136
Normal
-0.7
1016
Normal
-0.7
286
Normal
-0.7
258
Normal
-0.7
494
Normal
-0.7
271
Tumor
-0.7
1042
Normal
-0.7
142
Normal
-0.7
722
Normal
-0.7
666
Normal
-0.7
545
Tumor
-0.7
344
Normal
-0.7
388
Normal
-0.7
355
Tumor
-0.7
861
Tumor
-0.7
984
Normal
-0.7
425
Tumor
-0.7
818
Normal
-0.8
1031
Tumor
-0.8
1015
Tumor
-0.8
785
Tumor
-0.8
218
Normal
-0.8
635
Tumor
-0.8
393
Tumor
-0.8
664
Normal
-0.8
1044
Normal
-0.8
162
Normal
-0.8
858
Normal
-0.8
448
Normal
-0.8
358
Normal
-0.8
982
Normal
-0.8
468
Normal
-0.8
1028
Normal
-0.8
954
Normal
-0.8
357
Tumor
-0.8
132
Normal
-0.8
214
Normal
-0.8
884
Normal
-0.8
354
Normal
-0.8
914
Normal
-0.8
1026
Normal
-0.8
744
Normal
-0.8
958
Normal
-0.9
172
Normal
-0.9
528
Normal
-0.9
938
Normal
-0.9
534
Normal
-0.9
148
Normal
-0.9
918
Normal
-0.9
874
Normal
-0.9
824
Normal
-0.9
1046
Normal
-0.9
921
Tumor
-0.9
461
Tumor
-0.9
924
Normal
-0.9
432
Normal
-0.9
628
Normal
-0.9
364
Normal
-0.9
456
Normal
-0.9
968
Normal
-0.9
464
Normal
-0.9
342
Normal
-0.9
411
Tumor
-0.9
196
Normal
-0.9
1045
Tumor
-0.9
123
Tumor
-0.9
526
Normal
-0.9
786
Normal
-0.9
1014
Normal
-0.9
922
Normal
-0.9
964
Normal
-0.9
648
Normal
-0.9
186
Normal
-0.9
696
Normal
-0.9
443
Tumor
-0.9
868
Normal
-0.9
698
Normal
-0.9
484
Normal
-0.9
873
Tumor
-0.9
546
Normal
-0.9
738
Normal
-1.0
446
Normal
-1.0
967
Tumor
-1.0
222
Normal
-1.0
714
Normal
-1.0
956
Normal
-1.0
882
Normal
-1.0
415
Tumor
-1.0
756
Normal
-1.0
474
Normal
-1.0
353
Tumor
-1.0
518
Normal
-1.0
723
Tumor
-1.0
1032
Normal
-1.0
472
Normal
-1.0
866
Normal
-1.0
515
Tumor
-1.0
952
Normal
-1.0
742
Normal
-1.0
471
Tumor
-1.0
514
Normal
-1.0
466
Normal
-1.1
864
Normal
-1.1
356
Normal
-1.1
431
Tumor
-1.1
728
Normal
-1.1
416
Normal
-1.1
912
Normal
-1.1
636
Normal
-1.1
554
Normal
-1.1
341
Tumor
-1.1
862
Normal
-1.1
944
Normal
-1.1
627
Tumor
-1.1
642
Normal
-1.1
937
Tumor
-1.1
482
Normal
-1.1
746
Normal
-1.1
777
Tumor
-1.1
878
Normal
-1.1
915
Tumor
-1.2
412
Normal
-1.2
553
Tumor
-1.2
1022
Normal
-1.2
481
Tumor
-1.2
618
Normal
-1.2
462
Normal
-1.2
955
Tumor
-1.2
867
Tumor
-1.2
452
Normal
-1.3
981
Tumor
-1.3
436
Normal
-1.3
465
Tumor
-1.3
615
Tumor
-1.4
616
Normal
-1.4
513
Tumor
-1.4
327
Tumor
-1.5
1025
Tumor
-1.5
445
Tumor
-1.6
Show allShow less
LIVER CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
