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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
MIX23 is potential prognostic, high expression is unfavorable in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
33.7
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
100.8
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
99.9
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
80.2
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
74.0
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
63.5
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
63.2
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
60.6
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
58.4
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
52.3
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
50.8
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
49.5
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
45.9
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
45.7
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
45.2
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
44.7
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
44.3
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
41.5
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
38.1
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
37.8
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
36.1
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
35.9
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
35.8
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
35.8
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
33.5
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
32.9
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
32.8
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
32.8
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
32.0
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
31.8
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
31.7
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
31.3
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
30.7
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
30.3
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
30.1
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
29.8
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
29.5
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
26.3
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
25.5
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
25.4
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
25.1
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
25.0
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
24.2
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
24.2
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
23.2
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
22.8
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
21.6
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
21.4
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
20.4
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
20.1
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
19.5
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
18.1
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
17.8
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
17.4
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
16.1
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
15.9
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
15.1
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
14.8
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
14.5
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
14.1
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
11.7
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
11.5
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
10.2
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
7.2
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
MIX23 is not prognostic in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
29.7
Number of samples
521
Samples
Sample
Description
TPM
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
81.7
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
77.1
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
70.3
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
66.1
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
65.6
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
64.6
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
63.4
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
61.9
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
61.0
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
60.5
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
59.9
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
59.3
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
56.0
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
55.9
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
55.4
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
54.4
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
54.0
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
53.0
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
52.6
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
52.0
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
50.6
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
50.6
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
50.5
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
50.4
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
50.1
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
49.6
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
49.6
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
49.5
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
49.4
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
49.4
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
49.1
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
48.9
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
48.8
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
48.3
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
48.3
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
48.2
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
47.9
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
47.7
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
47.7
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
47.4
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
47.1
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
47.0
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
46.9
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
46.1
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
45.8
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
45.3
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
45.3
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
44.9
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
44.9
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
44.8
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
44.7
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
44.6
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
44.5
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
44.4
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
44.2
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
44.1
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
44.1
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
44.0
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
43.8
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
43.7
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
43.4
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
43.4
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
43.3
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
43.1
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
43.1
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
43.0
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
42.9
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
42.7
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
42.7
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
42.6
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
42.5
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
42.4
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
42.3
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
42.3
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
42.0
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
41.9
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
41.4
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
41.1
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
40.9
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
40.8
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
40.7
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
40.7
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
40.6
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
40.6
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
40.5
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
40.1
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
40.0
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
39.9
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
39.8
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
39.6
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
39.5
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
39.3
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
39.2
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
39.2
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
39.1
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
39.0
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
38.9
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
38.7
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
38.7
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
38.6
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
38.4
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
38.4
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
38.1
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
38.1
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
38.0
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
37.9
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
37.8
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
37.8
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
37.8
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
37.8
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
37.6
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
37.5
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
37.5
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
37.5
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
37.4
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
37.4
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
37.4
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
37.4
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
37.3
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
37.3
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
37.2
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
37.1
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
37.0
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
36.9
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
36.9
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
36.9
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
36.6
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
36.6
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
36.5
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
36.5
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
36.5
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
36.3
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
36.2
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
36.2
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
36.2
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
36.1
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
36.1
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
36.1
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
36.1
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
36.0
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
36.0
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
35.8
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
35.8
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
35.6
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
35.5
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
35.5
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
35.3
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
35.2
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
35.2
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
35.1
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
35.1
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
34.9
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
34.9
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
34.9
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
34.9
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
34.8
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
34.8
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
34.8
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
34.7
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
34.6
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
34.5
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
34.5
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
34.4
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
34.4
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
34.2
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
34.2
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
34.1
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
34.1
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
34.1
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
34.0
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
33.8
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
33.7
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
33.7
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
33.5
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
33.5
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
33.4
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
33.4
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
33.3
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
33.3
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
33.3
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
33.2
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
33.1
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
33.0
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
33.0
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
32.9
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
32.8
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
32.7
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
32.6
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
32.5
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
32.5
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
32.5
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
32.2
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
32.1
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
31.9
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
31.8
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
31.7
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
31.7
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
31.6
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
31.5
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
31.5
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
31.4
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
31.4
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
31.4
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
31.4
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
31.3
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
31.2
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
31.2
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
31.0
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
30.9
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
30.9
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
30.9
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
30.9
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
30.9
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
30.8
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
30.8
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
30.8
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
30.7
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
30.7
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
30.7
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
30.6
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
30.6
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
30.5
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
30.4
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
30.4
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
30.4
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
30.3
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
30.2
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
30.2
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
30.0
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
30.0
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
30.0
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
29.9
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
29.9
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
29.9
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
29.8
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
29.8
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
29.7
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
29.7
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
29.6
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
29.6
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
29.6
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
29.5
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
29.5
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
29.4
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
29.4
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
29.3
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
29.3
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
29.1
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
29.1
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
29.1
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
29.0
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
29.0
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
28.9
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
28.8
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
28.8
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
28.7
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
28.7
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
28.7
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
28.6
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
28.5
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
28.3
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
28.3
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
28.2
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
28.1
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
28.1
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
28.1
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
27.8
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
27.8
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
27.7
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
27.6
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
27.6
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
27.6
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
27.4
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
27.3
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
27.3
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
27.3
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
27.2
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
27.1
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
27.1
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
27.1
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
26.9
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
26.8
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
26.8
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
26.8
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
26.8
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
26.7
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
26.7
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
26.6
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
26.5
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
26.5
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
26.5
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
26.5
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
26.3
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
26.3
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
26.2
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
26.2
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
26.1
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
26.1
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
26.1
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
26.1
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
26.0
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
25.9
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
25.9
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
25.9
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
25.8
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
25.7
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
25.7
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
25.6
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
25.5
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
25.5
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
25.5
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
25.5
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
25.4
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
25.4
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
25.4
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
25.4
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
25.4
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
25.3
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
25.3
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
25.2
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
25.2
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
25.1
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
25.1
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
25.1
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
25.0
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
25.0
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
24.9
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
24.8
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
24.8
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
24.8
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
24.8
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
24.7
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
24.7
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
24.7
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
24.7
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
24.5
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
24.5
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
24.5
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
24.4
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
24.3
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
24.2
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
24.2
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
24.2
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
24.2
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
24.1
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
24.1
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
24.0
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
23.9
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
23.9
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
23.9
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
23.9
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
23.9
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
23.7
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
23.6
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
23.6
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
23.5
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
23.4
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
23.3
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
23.2
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
23.1
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
23.1
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
23.1
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
23.0
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
22.9
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
22.9
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
22.8
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
22.8
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
22.7
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
22.6
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
22.6
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
22.5
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
22.5
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
22.5
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
22.4
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
22.4
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
22.1
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
22.0
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
21.9
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
21.8
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
21.8
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
21.8
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
21.8
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
21.7
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
21.7
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
21.6
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
21.5
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
21.4
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
21.3
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
21.2
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
21.2
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
21.2
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
21.0
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
20.9
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
20.8
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
20.7
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
20.5
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
20.4
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
20.3
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
20.3
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
20.3
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
20.2
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
20.2
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
20.2
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
20.2
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
20.2
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
20.2
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
20.2
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
20.1
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
20.1
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
20.0
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
20.0
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
20.0
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
20.0
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
19.8
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
19.7
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
19.6
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
19.5
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
19.4
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
19.4
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
19.3
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
19.2
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
19.2
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
19.2
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
19.2
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
19.2
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
19.0
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
19.0
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
19.0
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
19.0
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
18.9
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
18.9
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
18.7
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
18.7
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
18.7
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
18.6
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
18.6
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
18.5
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
18.5
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
18.4
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
18.3
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
18.1
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
18.1
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
18.1
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
18.1
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
18.0
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
18.0
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
18.0
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
18.0
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
17.9
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
17.8
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
17.8
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
17.8
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
17.8
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
17.8
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
17.8
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
17.7
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
17.6
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
17.5
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
17.2
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
17.2
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
17.1
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
17.1
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
17.1
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
17.0
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
16.7
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
16.4
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
16.4
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
16.3
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
16.3
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
16.3
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
15.9
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
15.9
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
15.8
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
15.7
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
15.7
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
15.6
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
15.5
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
15.3
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
15.3
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
15.2
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
15.2
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
15.2
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
15.1
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
15.0
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
15.0
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
15.0
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
14.8
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
14.8
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
14.8
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
14.8
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
14.7
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
14.6
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
14.3
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
14.3
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
14.2
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
14.1
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
14.1
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
14.0
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
13.9
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
13.9
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
13.9
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
13.7
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
13.4
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
13.2
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
12.9
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
12.8
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
12.5
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
12.2
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
12.1
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
11.9
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
11.8
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
11.6
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
11.3
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
11.0
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
11.0
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
10.7
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
10.7
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
9.9
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
9.2
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
9.0
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
MIX23 is not prognostic in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
34.0
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
73.9
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
63.1
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
61.6
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
60.7
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
60.2
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
59.1
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
58.5
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
56.9
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
56.1
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
55.9
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
54.1
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
53.4
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
52.9
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
50.2
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
50.0
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
49.9
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
48.7
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
47.0
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
45.8
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
45.6
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
44.6
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
43.7
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
43.6
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
43.1
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
42.9
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
42.3
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
42.2
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
42.1
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
41.9
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
40.9
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
40.3
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
39.4
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
39.2
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
38.7
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
38.3
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
38.1
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
37.7
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
36.8
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
36.4
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
36.4
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
36.3
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
34.9
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
34.8
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
34.8
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
34.6
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
34.6
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
34.5
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
34.3
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
34.1
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
33.9
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
33.3
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
33.1
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
33.1
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
32.5
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
31.9
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
31.2
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
30.7
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
30.5
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
29.8
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
29.7
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
29.3
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
29.3
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
28.2
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
27.9
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
27.5
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
27.3
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
26.9
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
26.8
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
26.8
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
26.7
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
26.1
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
26.0
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
25.8
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
23.5
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
23.1
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
23.1
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
22.7
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
21.9
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
21.1
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
20.7
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
20.7
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
20.6
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
19.9
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
19.8
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
18.5
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
18.3
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
17.4
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
16.4
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
16.4
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
16.1
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
15.5
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
15.2
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
15.0
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
13.7
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
13.4
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
13.4
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
13.1
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
12.3
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
11.7
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
MIX23 is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
29.9
Number of samples
282
Samples
Sample
Description
TPM
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
135.3
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
105.5
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
92.8
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
72.1
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
67.0
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
65.3
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
64.8
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
64.5
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
64.4
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
63.5
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
60.2
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
59.7
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
59.7
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
59.6
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
56.9
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
56.3
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
56.1
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
55.7
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
55.6
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
53.3
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
52.5
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
52.1
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
51.2
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
50.9
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
50.9
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
50.0
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
50.0
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
49.8
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
49.7
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
49.6
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
49.5
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
49.4
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
48.9
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
48.8
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
48.5
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
47.7
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
47.0
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
46.0
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
45.7
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
44.6
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
44.0
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
43.7
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
43.5
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
43.4
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
43.0
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
41.9
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
41.7
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
41.7
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
40.2
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
40.2
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
39.5
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
39.4
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
39.0
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
38.8
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
38.8
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
38.6
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
38.6
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
38.4
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
38.4
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
38.4
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
38.3
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
38.2
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
38.0
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
37.9
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
37.7
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
37.5
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
37.3
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
37.3
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
37.2
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
37.1
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
37.0
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
36.9
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
36.7
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
36.6
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
36.5
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
35.8
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
35.6
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
35.5
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
35.5
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
35.3
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
35.1
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
35.1
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
34.9
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
34.8
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
34.4
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
34.2
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
34.1
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
33.9
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
33.8
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
33.6
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
33.5
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
33.3
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
33.3
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
33.0
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
32.9
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
32.9
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
32.8
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
32.8
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
32.7
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
32.7
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
32.6
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
32.4
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
32.2
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
32.2
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
32.0
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
31.7
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
31.7
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
31.6
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
31.1
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
31.1
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
31.1
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
30.8
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
30.5
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
30.5
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
30.4
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
30.2
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
30.1
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
30.1
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
30.0
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
29.9
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
29.9
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
29.8
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
29.8
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
29.8
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
29.6
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
29.6
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
29.5
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
29.4
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
29.3
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
29.2
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
28.9
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
28.9
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
28.6
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
28.6
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
28.6
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
28.6
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
28.4
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
28.4
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
28.3
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
28.2
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
28.1
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
28.0
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
27.6
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
27.4
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
27.4
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
27.3
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
27.3
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
27.3
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
27.2
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
26.8
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
26.4
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
26.4
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
26.1
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
26.0
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
26.0
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
25.8
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
25.6
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
25.5
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
25.2
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
25.2
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
25.2
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
25.1
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
25.1
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
25.1
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
25.1
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
25.0
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
25.0
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
24.7
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
24.5
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
24.4
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
24.3
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
24.3
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
24.2
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
24.2
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
24.2
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
24.1
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
23.9
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
23.9
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
23.7
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
23.3
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
23.3
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
23.2
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
23.1
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
23.0
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
23.0
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
23.0
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
22.9
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
22.4
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
22.2
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
22.1
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
22.0
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
22.0
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
22.0
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
22.0
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
21.8
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
21.8
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
21.7
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
21.6
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
21.5
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
21.3
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
21.2
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
20.8
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
20.8
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
20.7
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
20.7
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
20.4
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
20.3
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
20.3
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
20.3
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
20.2
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
20.1
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
19.8
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
19.6
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
19.4
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
19.4
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
19.3
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
19.2
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
19.1
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
19.0
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
18.9
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
18.8
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
18.7
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
18.6
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
18.5
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
18.5
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
18.4
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
18.3
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
18.3
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
17.9
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
17.7
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
17.7
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
17.4
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
17.3
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
17.3
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
17.1
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
16.8
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
16.7
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
16.6
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
16.5
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
16.5
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
16.3
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
16.2
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
16.2
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
16.1
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
15.9
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
15.6
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
15.6
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
15.5
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
15.1
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
15.0
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
15.0
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
14.9
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
14.6
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
14.3
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
13.9
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
13.8
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
13.7
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
12.7
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
12.5
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
12.3
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
11.9
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
11.9
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
11.3
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
11.1
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
11.0
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
10.7
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
10.0
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
9.5
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
9.1
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
8.8
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
8.8
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
8.4
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
8.0
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
5.3
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
3.6
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
0.0
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
0.0
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
0.0
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
0.0
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
0.0
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
0.0
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
0.0
Show allShow less
RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0026410003
Tumor
N/A
CPT0002370001
Normal
N/A
CPT0000790001
Normal
N/A
CPT0019130003
Tumor
N/A
CPT0088570001
Normal
N/A
CPT0065820001
Normal
N/A
CPT0025880003
Tumor
N/A
CPT0076330003
Tumor
N/A
CPT0001180009
Tumor
N/A
CPT0078800003
Tumor
N/A
CPT0078660003
Tumor
N/A
CPT0065690003
Tumor
N/A
CPT0078930003
Tumor
N/A
CPT0011240003
Tumor
N/A
CPT0084560003
Tumor
N/A
CPT0012670003
Tumor
N/A
CPT0002350011
Tumor
N/A
CPT0012920003
Normal
N/A
CPT0064370003
Tumor
N/A
CPT0088900003
Tumor
N/A
CPT0006730001
Normal
N/A
CPT0007870001
Normal
N/A
CPT0087040003
Tumor
N/A
CPT0079380003
Tumor
N/A
CPT0025170003
Tumor
N/A
CPT0024670003
Tumor
N/A
CPT0012640003
Normal
N/A
CPT0078830003
Tumor
N/A
CPT0021240003
Tumor
N/A
CPT0071150004
Tumor
N/A
CPT0089020003
Tumor
N/A
CPT0088970003
Tumor
N/A
CPT0066480003
Tumor
N/A
CPT0000870016
Tumor
N/A
CPT0092790003
Tumor
N/A
CPT0025610001
Normal
N/A
CPT0063330001
Normal
N/A
CPT0001350001
Normal
N/A
CPT0078940001
Normal
N/A
CPT0086830003
Normal
N/A
CPT0088760003
Tumor
N/A
CPT0092190003
Normal
N/A
CPT0002270011
Tumor
N/A
CPT0088550004
Tumor
N/A
CPT0023710001
Normal
N/A
CPT0077140001
Normal
N/A
CPT0025230003
Tumor
N/A
CPT0025050003
Tumor
N/A
CPT0075720003
Tumor
N/A
CPT0012570003
Normal
N/A
CPT0089040001
Normal
N/A
CPT0017850003
Tumor
N/A
CPT0019990003
Tumor
N/A
CPT0012900004
Tumor
N/A
CPT0000780007
Tumor
N/A
CPT0023360001
Normal
N/A
CPT0001510001
Normal
N/A
CPT0078840001
Normal
N/A
CPT0010110003
Tumor
N/A
CPT0086890003
Normal
N/A
CPT0092290003
Tumor
N/A
CPT0020120003
Tumor
N/A
CPT0088640003
Normal
N/A
CPT0088500001
Normal
N/A
CPT0069010001
Normal
N/A
CPT0006440003
Tumor
N/A
CPT0063630003
Tumor
N/A
CPT0001550001
Normal
N/A
CPT0086950003
Tumor
N/A
CPT0014350001
Normal
N/A
CPT0014470001
Normal
N/A
CPT0086360003
Tumor
N/A
CPT0069160003
Tumor
N/A
CPT0006950001
Normal
N/A
CPT0007860003
Tumor
N/A
CPT0082010001
Normal
N/A
CPT0079230003
Tumor
N/A
CPT0001340003
Tumor
N/A
CPT0011410003
Tumor
N/A
CPT0079180003
Tumor
N/A
CPT0012080003
Tumor
N/A
CPT0084590001
Normal
N/A
CPT0063640001
Normal
N/A
CPT0009000003
Tumor
N/A
CPT0010170001
Normal
N/A
CPT0079270003
Tumor
N/A
CPT0069190001
Normal
N/A
CPT0001270001
Normal
N/A
CPT0015810003
Tumor
N/A
CPT0025110003
Tumor
N/A
CPT0024680001
Normal
N/A
CPT0012090003
Normal
N/A
CPT0009020003
Normal
N/A
CPT0077310003
Tumor
N/A
CPT0077490003
Tumor
N/A
CPT0014160003
Tumor
N/A
CPT0078530001
Normal
N/A
CPT0020020001
Normal
N/A
CPT0066520001
Normal
N/A
CPT0014370004
Tumor
N/A
CPT0001500009
Tumor
N/A
CPT0081600003
Tumor
N/A
CPT0001190001
Normal
N/A
CPT0088630003
Tumor
N/A
CPT0069000003
Tumor
N/A
CPT0088710001
Normal
N/A
CPT0092160003
Tumor
N/A
CPT0006630003
Tumor
N/A
CPT0001260009
Tumor
N/A
CPT0065750003
Tumor
N/A
CPT0065930003
Tumor
N/A
CPT0012770003
Normal
N/A
CPT0012180003
Tumor
N/A
CPT0017410003
Tumor
N/A
CPT0023350003
Tumor
N/A
CPT0075570001
Normal
N/A
CPT0014130001
Normal
N/A
CPT0078510003
Tumor
N/A
CPT0066470004
Tumor
N/A
CPT0065450001
Normal
N/A
CPT0079000001
Normal
N/A
CPT0092800003
Normal
N/A
CPT0006900003
Tumor
N/A
CPT0015910003
Tumor
N/A
CPT0020130001
Normal
N/A
CPT0089480003
Normal
N/A
CPT0007470001
Normal
N/A
CPT0064400001
Normal
N/A
CPT0088920001
Normal
N/A
CPT0092730003
Tumor
N/A
CPT0077110003
Tumor
N/A
CPT0086030003
Tumor
N/A
CPT0025290003
Tumor
N/A
CPT0012550003
Tumor
N/A
CPT0018250001
Normal
N/A
CPT0017450001
Normal
N/A
CPT0077320001
Normal
N/A
CPT0077500001
Normal
N/A
CPT0092310003
Normal
N/A
CPT0079480003
Tumor
N/A
CPT0006530001
Normal
N/A
CPT0065430003
Tumor
N/A
CPT0019160001
Normal
N/A
CPT0081620001
Normal
N/A
CPT0063320003
Tumor
N/A
CPT0078670001
Normal
N/A
CPT0089460004
Tumor
N/A
CPT0007320003
Tumor
N/A
CPT0088690003
Tumor
N/A
CPT0010160003
Tumor
N/A
CPT0014450004
Tumor
N/A
CPT0025920001
Normal
N/A
CPT0076350001
Normal
N/A
CPT0015730003
Tumor
N/A
CPT0025350003
Tumor
N/A
CPT0012370003
Tumor
N/A
CPT0012280003
Tumor
N/A
CPT0009080003
Normal
N/A
CPT0079410003
Tumor
N/A
CPT0075560003
Tumor
N/A
CPT0001230001
Normal
N/A
CPT0079510001
Normal
N/A
CPT0066430001
Normal
N/A
CPT0001540009
Tumor
N/A
CPT0078990003
Tumor
N/A
CPT0065810003
Tumor
N/A
CPT0010120001
Normal
N/A
CPT0086870003
Tumor
N/A
CPT0075170001
Normal
N/A
CPT0000640003
Tumor
N/A
CPT0065870003
Tumor
N/A
CPT0088780001
Normal
N/A
CPT0086970003
Normal
N/A
CPT0079300001
Normal
N/A
CPT0092740003
Normal
N/A
CPT0085670003
Tumor
N/A
CPT0081880003
Tumor
N/A
CPT0013790003
Normal
N/A
CPT0012290003
Normal
N/A
CPT0087050003
Normal
N/A
CPT0009060003
Tumor
N/A
CPT0023690003
Tumor
N/A
CPT0001220008
Tumor
N/A
CPT0088480003
Tumor
N/A
CPT0026420001
Normal
N/A
CPT0079430001
Normal
N/A
CPT0000890001
Normal
N/A
CPT0086370003
Normal
N/A
CPT0025580004
Tumor
N/A
CPT0081990003
Tumor
N/A
CPT0025060001
Normal
N/A
CPT0075130003
Tumor
N/A
CPT0000660001
Normal
N/A
CPT0086820003
Tumor
N/A
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
