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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
CALM3 is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
334.7
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
881.9
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
864.6
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
794.4
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
756.0
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
745.4
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
745.0
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
688.6
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
658.8
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
628.2
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
613.5
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
605.8
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
576.3
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
518.0
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
476.6
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
469.2
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
460.3
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
448.3
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
432.9
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
399.9
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
368.3
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
362.0
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
360.7
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
346.2
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
345.4
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
343.0
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
342.0
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
338.6
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
331.4
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
324.9
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
315.3
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
308.9
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
283.5
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
269.8
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
267.8
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
255.2
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
231.5
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
223.8
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
223.0
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
222.2
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
222.0
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
218.3
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
215.8
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
189.6
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
187.7
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
185.2
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
176.4
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
174.3
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
162.4
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
158.4
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
155.3
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
150.5
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
136.8
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
129.7
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
128.9
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
128.6
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
128.0
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
121.3
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
103.4
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
95.9
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
91.0
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
89.0
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
87.8
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
87.0
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
CALM3 is potential prognostic, high expression is favorable in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
225.9
Number of samples
521
Samples
Sample
Description
TPM
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
457.1
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
446.3
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
426.8
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
420.3
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
408.1
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
399.9
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
396.2
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
394.0
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
382.2
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
379.6
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
378.0
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
368.1
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
367.2
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
367.1
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
362.7
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
362.2
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
360.5
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
358.0
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
357.7
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
355.5
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
354.7
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
353.8
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
353.7
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
353.5
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
353.1
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
352.7
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
351.5
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
349.3
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
348.5
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
348.1
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
346.2
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
346.0
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
345.8
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
343.0
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
342.8
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
341.0
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
340.6
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
340.6
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
340.2
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
340.0
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
338.6
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
338.1
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
335.5
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
334.7
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
333.4
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
332.9
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
332.0
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
329.9
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
327.1
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
325.1
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
324.5
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
323.8
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
320.1
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
319.8
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
319.8
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
319.4
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
318.9
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
317.6
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
317.1
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
315.8
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
315.3
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
315.2
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
315.2
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
315.1
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
314.2
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
312.8
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
312.7
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
312.4
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
312.4
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
311.8
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
311.7
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
311.4
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
311.3
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
311.1
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
310.4
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
307.2
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
307.0
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
305.5
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
304.9
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
304.2
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
304.1
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
303.8
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
301.2
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
300.3
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
299.2
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
299.1
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
298.5
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
298.0
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
297.2
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
297.2
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
296.6
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
296.3
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
296.3
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
296.3
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
296.1
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
296.0
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
295.6
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
294.8
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
294.1
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
293.2
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
293.2
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
293.1
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
293.1
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
292.1
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
291.9
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
290.9
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
290.2
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
290.1
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
290.0
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
289.8
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
289.4
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
289.2
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
289.1
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
289.0
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
286.9
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
286.9
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
286.1
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
286.0
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
285.7
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
285.1
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
284.6
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
281.2
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
281.0
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
280.8
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
280.7
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
279.4
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
278.3
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
278.2
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
277.0
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
276.6
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
276.3
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
276.1
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
275.7
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
275.0
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
274.8
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
274.4
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
274.1
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
273.3
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
273.2
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
272.9
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
272.9
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
271.2
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
271.2
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
271.1
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
270.9
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
270.4
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
269.2
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
268.8
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
268.5
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
268.3
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
267.5
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
266.9
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
266.6
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
265.9
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
265.8
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
265.5
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
265.1
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
264.7
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
263.4
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
263.1
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
263.0
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
262.8
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
261.7
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
261.7
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
261.1
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
260.9
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
260.4
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
260.1
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
260.0
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
259.9
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
259.4
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
259.0
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
258.1
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
257.9
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
257.8
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
257.6
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
257.5
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
257.5
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
257.4
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
256.6
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
256.2
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
256.2
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
255.7
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
255.6
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
255.3
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
255.1
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
255.0
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
254.9
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
254.8
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
254.8
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
253.1
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
252.2
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
252.0
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
251.9
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
251.9
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
251.8
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
251.3
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
251.1
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
250.9
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
250.6
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
250.5
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
250.3
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
249.5
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
249.3
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
247.1
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
247.0
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
246.9
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
245.7
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
244.6
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
244.4
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
243.8
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
243.7
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
243.4
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
243.1
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
242.8
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
241.9
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
241.8
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
241.7
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
241.7
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
241.0
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
241.0
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
240.7
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
240.3
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
240.1
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
239.9
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
239.7
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
239.5
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
239.5
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
239.2
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
239.1
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
238.9
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
238.0
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
237.9
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
236.6
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
236.3
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
235.7
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
235.2
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
234.9
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
234.2
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
233.9
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
233.8
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
233.7
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
233.6
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
233.2
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
232.7
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
232.6
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
232.5
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
232.5
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
232.2
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
232.1
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
231.9
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
230.7
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
230.5
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
230.3
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
230.1
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
229.0
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
228.5
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
228.1
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
227.4
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
227.1
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
226.9
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
226.8
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
226.7
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
226.6
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
226.5
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
226.0
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
225.9
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
225.6
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
225.4
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
225.3
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
224.9
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
224.8
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
223.9
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
223.7
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
223.0
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
222.9
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
222.8
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
222.3
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
222.3
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
222.0
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
221.9
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
221.9
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
221.7
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
221.5
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
221.4
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
220.7
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
220.6
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
220.4
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
220.0
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
219.5
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
219.4
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
219.4
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
219.1
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
217.8
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
217.0
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
216.8
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
216.7
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
216.5
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
216.4
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
215.1
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
214.0
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
213.6
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
213.3
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
212.7
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
212.7
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
211.9
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
211.1
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
211.0
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
210.7
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
210.6
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
210.2
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
209.6
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
209.3
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
209.1
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
208.4
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
208.1
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
208.0
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
207.7
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
207.4
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
207.3
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
207.3
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
206.8
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
206.6
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
206.4
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
206.2
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
206.0
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
205.6
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
205.3
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
205.2
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
204.5
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
204.4
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
203.5
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
203.4
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
202.5
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
201.7
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
201.7
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
201.5
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
201.1
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
201.0
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
201.0
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
200.8
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
200.1
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
199.2
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
198.3
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
197.8
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
197.7
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
196.8
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
196.5
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
194.3
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
194.1
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
193.9
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
193.8
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
193.0
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
192.9
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
192.7
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
191.7
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
191.4
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
191.1
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
190.0
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
189.6
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
187.3
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
187.0
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
186.0
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
186.0
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
185.1
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
184.6
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
184.4
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
184.2
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
183.6
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
183.6
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
182.4
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
182.2
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
182.2
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
181.9
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
181.6
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
180.5
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
180.5
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
180.1
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
179.9
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
179.8
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
179.4
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
178.5
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
177.7
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
177.7
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
177.6
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
177.4
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
176.9
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
176.8
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
174.6
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
174.3
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
174.0
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
173.9
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
173.6
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
173.5
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
173.2
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
172.0
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
171.8
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
171.6
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
171.4
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
171.2
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
171.2
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
170.8
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
170.7
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
168.7
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
167.7
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
167.4
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
166.1
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
165.3
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
165.0
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
164.3
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
163.9
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
163.2
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
162.4
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
162.2
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
162.0
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
161.5
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
160.1
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
158.6
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
158.4
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
156.8
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
155.8
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
154.3
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
154.2
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
152.9
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
152.7
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
151.9
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
151.6
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
151.1
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
151.1
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
149.9
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
149.7
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
148.8
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
148.0
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
148.0
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
147.0
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
146.4
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
145.1
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
144.8
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
144.7
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
144.0
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
143.2
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
142.4
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
142.1
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
141.7
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
141.4
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
140.7
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
140.4
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
140.3
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
139.8
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
139.8
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
139.4
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
139.3
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
139.2
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
139.1
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
139.0
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
136.5
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
132.5
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
131.4
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
130.6
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
129.5
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
128.8
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
127.7
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
126.3
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
126.0
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
125.8
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
125.0
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
123.9
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
121.5
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
120.1
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
119.6
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
117.3
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
117.2
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
116.0
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
115.0
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
114.6
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
113.4
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
112.5
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
111.4
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
111.2
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
111.2
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
110.9
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
108.6
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
107.8
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
107.3
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
106.8
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
105.6
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
104.0
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
103.8
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
103.6
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
101.1
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
99.8
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
99.7
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
98.1
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
97.7
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
95.8
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
93.5
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
91.6
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
91.4
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
91.1
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
90.9
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
90.5
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
89.3
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
86.2
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
82.7
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
82.3
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
81.2
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
79.5
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
77.9
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
74.0
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
69.8
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
67.0
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
61.6
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
61.2
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
57.7
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
56.6
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
56.6
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
54.2
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
51.5
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
49.8
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
48.1
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
CALM3 is not prognostic in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
242.5
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
403.2
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
366.2
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
359.9
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
348.4
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
345.3
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
345.1
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
343.6
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
340.8
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
337.6
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
336.6
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
333.2
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
323.4
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
322.6
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
320.7
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
320.0
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
313.7
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
310.9
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
308.3
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
305.3
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
302.4
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
299.2
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
296.4
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
295.2
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
288.1
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
283.1
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
276.3
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
275.5
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
274.7
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
274.1
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
272.2
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
272.2
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
271.5
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
267.4
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
265.6
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
264.7
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
261.0
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
260.6
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
259.8
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
259.7
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
259.7
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
259.1
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
258.3
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
255.2
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
255.2
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
246.8
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
243.7
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
242.6
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
242.4
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
241.5
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
240.7
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
240.0
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
237.3
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
234.1
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
227.0
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
226.9
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
226.7
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
226.7
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
226.6
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
226.2
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
226.2
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
224.1
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
223.2
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
223.2
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
218.2
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
217.0
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
215.9
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
213.6
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
212.4
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
210.8
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
210.5
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
209.8
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
206.7
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
204.3
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
202.2
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
202.0
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
201.9
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
201.3
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
201.2
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
199.6
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
193.4
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
191.1
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
190.9
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
190.3
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
188.3
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
183.9
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
179.8
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
174.3
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
172.3
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
171.1
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
163.3
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
158.6
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
158.6
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
142.1
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
136.7
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
129.6
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
126.9
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
126.6
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
122.4
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
110.1
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
CALM3 is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
171.2
Number of samples
282
Samples
Sample
Description
TPM
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
792.8
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
784.1
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
523.5
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
516.5
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
492.2
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
480.1
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
479.7
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
444.0
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
412.0
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
408.0
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
387.4
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
376.2
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
360.6
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
351.2
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
350.5
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
347.2
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
342.9
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
338.6
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
329.1
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
318.6
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
316.8
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
312.1
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
304.6
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
302.8
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
293.9
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
289.2
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
285.3
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
280.5
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
280.5
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
276.9
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
274.2
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
273.7
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
265.9
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
258.4
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
257.7
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
256.4
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
255.6
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
250.0
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
249.6
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
245.9
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
245.5
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
243.6
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
241.5
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
239.4
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
238.7
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
229.5
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
228.2
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
228.2
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
228.0
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
226.0
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
224.8
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
224.2
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
221.7
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
217.0
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
215.2
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
213.5
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
212.2
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
211.9
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
211.8
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
211.7
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
211.1
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
210.1
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
209.4
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
208.8
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
208.4
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
208.4
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
208.0
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
207.0
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
206.4
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
203.4
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
202.0
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
200.5
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
200.0
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
199.2
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
199.0
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
197.8
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
196.9
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
196.6
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
195.8
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
195.3
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
192.4
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
192.1
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
191.6
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
189.7
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
188.9
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
188.8
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
187.9
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
186.9
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
186.3
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
185.4
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
184.8
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
184.4
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
183.5
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
183.1
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
180.7
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
179.8
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
178.9
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
176.8
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
176.7
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
176.1
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
176.0
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
175.0
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
174.3
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
174.3
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
174.2
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
174.2
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
173.4
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
173.3
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
172.2
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
169.8
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
169.8
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
167.9
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
167.4
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
167.2
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
166.5
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
165.7
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
164.7
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
164.1
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
163.8
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
163.3
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
161.6
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
160.3
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
158.5
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
158.2
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
157.8
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
157.3
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
153.5
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
153.2
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
152.6
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
152.5
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
152.5
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
151.8
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
151.5
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
150.5
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
150.4
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
150.1
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
149.3
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
148.5
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
147.9
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
147.4
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
146.1
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
145.8
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
145.0
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
144.7
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
144.3
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
143.9
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
143.6
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
142.4
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
142.2
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
142.1
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
141.6
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
141.4
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
140.3
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
138.4
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
138.3
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
138.2
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
138.1
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
138.0
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
138.0
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
137.3
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
136.9
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
135.8
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
135.7
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
135.6
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
134.4
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
134.4
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
133.8
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
133.7
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
133.2
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
132.2
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
131.8
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
131.5
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
131.2
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
131.2
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
130.6
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
130.2
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
130.0
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
129.9
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
129.2
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
129.1
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
129.1
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
127.5
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
127.5
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
126.6
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
126.4
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
125.9
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
125.4
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
125.3
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
124.9
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
124.4
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
123.6
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
123.1
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
122.4
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
122.4
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
121.1
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
119.1
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
118.6
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
118.5
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
118.2
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
117.4
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
116.6
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
116.5
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
116.4
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
115.9
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
115.9
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
115.3
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
114.6
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
114.2
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
113.8
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
113.8
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
113.6
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
112.9
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
112.8
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
112.8
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
112.7
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
111.8
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
111.7
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
111.2
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
110.7
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
108.3
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
107.9
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
107.4
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
107.2
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
106.1
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
105.9
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
105.5
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
104.9
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
104.1
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
103.6
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
103.0
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
103.0
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
101.3
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
100.2
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
98.6
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
98.3
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
96.8
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
93.5
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
92.1
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
91.9
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
90.9
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
90.0
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
89.9
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
89.1
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
88.9
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
88.2
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
87.5
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
84.3
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
83.8
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
83.5
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
82.3
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
80.3
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
80.2
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
80.1
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
79.8
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
79.3
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
78.5
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
78.3
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
77.0
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
75.6
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
74.5
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
73.7
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
73.6
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
72.7
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
72.2
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
71.0
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
68.2
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
67.7
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
65.5
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
65.4
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
63.6
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
62.3
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
60.9
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
56.8
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
56.4
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
54.1
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
53.9
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
51.0
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
49.5
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
46.4
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
40.1
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
34.4
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
34.3
Show allShow less
RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0026410003
Tumor
N/A
CPT0002370001
Normal
N/A
CPT0000790001
Normal
N/A
CPT0019130003
Tumor
N/A
CPT0088570001
Normal
N/A
CPT0065820001
Normal
N/A
CPT0025880003
Tumor
N/A
CPT0076330003
Tumor
N/A
CPT0001180009
Tumor
N/A
CPT0078800003
Tumor
N/A
CPT0078660003
Tumor
N/A
CPT0065690003
Tumor
N/A
CPT0078930003
Tumor
N/A
CPT0011240003
Tumor
N/A
CPT0084560003
Tumor
N/A
CPT0012670003
Tumor
N/A
CPT0002350011
Tumor
N/A
CPT0012920003
Normal
N/A
CPT0064370003
Tumor
N/A
CPT0088900003
Tumor
N/A
CPT0006730001
Normal
N/A
CPT0007870001
Normal
N/A
CPT0087040003
Tumor
N/A
CPT0079380003
Tumor
N/A
CPT0025170003
Tumor
N/A
CPT0024670003
Tumor
N/A
CPT0012640003
Normal
N/A
CPT0078830003
Tumor
N/A
CPT0021240003
Tumor
N/A
CPT0071150004
Tumor
N/A
CPT0089020003
Tumor
N/A
CPT0088970003
Tumor
N/A
CPT0066480003
Tumor
N/A
CPT0000870016
Tumor
N/A
CPT0092790003
Tumor
N/A
CPT0025610001
Normal
N/A
CPT0063330001
Normal
N/A
CPT0001350001
Normal
N/A
CPT0078940001
Normal
N/A
CPT0086830003
Normal
N/A
CPT0088760003
Tumor
N/A
CPT0092190003
Normal
N/A
CPT0002270011
Tumor
N/A
CPT0088550004
Tumor
N/A
CPT0023710001
Normal
N/A
CPT0077140001
Normal
N/A
CPT0025230003
Tumor
N/A
CPT0025050003
Tumor
N/A
CPT0075720003
Tumor
N/A
CPT0012570003
Normal
N/A
CPT0089040001
Normal
N/A
CPT0017850003
Tumor
N/A
CPT0019990003
Tumor
N/A
CPT0012900004
Tumor
N/A
CPT0000780007
Tumor
N/A
CPT0023360001
Normal
N/A
CPT0001510001
Normal
N/A
CPT0078840001
Normal
N/A
CPT0010110003
Tumor
N/A
CPT0086890003
Normal
N/A
CPT0092290003
Tumor
N/A
CPT0020120003
Tumor
N/A
CPT0088640003
Normal
N/A
CPT0088500001
Normal
N/A
CPT0069010001
Normal
N/A
CPT0006440003
Tumor
N/A
CPT0063630003
Tumor
N/A
CPT0001550001
Normal
N/A
CPT0086950003
Tumor
N/A
CPT0014350001
Normal
N/A
CPT0014470001
Normal
N/A
CPT0086360003
Tumor
N/A
CPT0069160003
Tumor
N/A
CPT0006950001
Normal
N/A
CPT0007860003
Tumor
N/A
CPT0082010001
Normal
N/A
CPT0079230003
Tumor
N/A
CPT0001340003
Tumor
N/A
CPT0011410003
Tumor
N/A
CPT0079180003
Tumor
N/A
CPT0012080003
Tumor
N/A
CPT0084590001
Normal
N/A
CPT0063640001
Normal
N/A
CPT0009000003
Tumor
N/A
CPT0010170001
Normal
N/A
CPT0079270003
Tumor
N/A
CPT0069190001
Normal
N/A
CPT0001270001
Normal
N/A
CPT0015810003
Tumor
N/A
CPT0025110003
Tumor
N/A
CPT0024680001
Normal
N/A
CPT0012090003
Normal
N/A
CPT0009020003
Normal
N/A
CPT0077310003
Tumor
N/A
CPT0077490003
Tumor
N/A
CPT0014160003
Tumor
N/A
CPT0078530001
Normal
N/A
CPT0020020001
Normal
N/A
CPT0066520001
Normal
N/A
CPT0014370004
Tumor
N/A
CPT0001500009
Tumor
N/A
CPT0081600003
Tumor
N/A
CPT0001190001
Normal
N/A
CPT0088630003
Tumor
N/A
CPT0069000003
Tumor
N/A
CPT0088710001
Normal
N/A
CPT0092160003
Tumor
N/A
CPT0006630003
Tumor
N/A
CPT0001260009
Tumor
N/A
CPT0065750003
Tumor
N/A
CPT0065930003
Tumor
N/A
CPT0012770003
Normal
N/A
CPT0012180003
Tumor
N/A
CPT0017410003
Tumor
N/A
CPT0023350003
Tumor
N/A
CPT0075570001
Normal
N/A
CPT0014130001
Normal
N/A
CPT0078510003
Tumor
N/A
CPT0066470004
Tumor
N/A
CPT0065450001
Normal
N/A
CPT0079000001
Normal
N/A
CPT0092800003
Normal
N/A
CPT0006900003
Tumor
N/A
CPT0015910003
Tumor
N/A
CPT0020130001
Normal
N/A
CPT0089480003
Normal
N/A
CPT0007470001
Normal
N/A
CPT0064400001
Normal
N/A
CPT0088920001
Normal
N/A
CPT0092730003
Tumor
N/A
CPT0077110003
Tumor
N/A
CPT0086030003
Tumor
N/A
CPT0025290003
Tumor
N/A
CPT0012550003
Tumor
N/A
CPT0018250001
Normal
N/A
CPT0017450001
Normal
N/A
CPT0077320001
Normal
N/A
CPT0077500001
Normal
N/A
CPT0092310003
Normal
N/A
CPT0079480003
Tumor
N/A
CPT0006530001
Normal
N/A
CPT0065430003
Tumor
N/A
CPT0019160001
Normal
N/A
CPT0081620001
Normal
N/A
CPT0063320003
Tumor
N/A
CPT0078670001
Normal
N/A
CPT0089460004
Tumor
N/A
CPT0007320003
Tumor
N/A
CPT0088690003
Tumor
N/A
CPT0010160003
Tumor
N/A
CPT0014450004
Tumor
N/A
CPT0025920001
Normal
N/A
CPT0076350001
Normal
N/A
CPT0015730003
Tumor
N/A
CPT0025350003
Tumor
N/A
CPT0012370003
Tumor
N/A
CPT0012280003
Tumor
N/A
CPT0009080003
Normal
N/A
CPT0079410003
Tumor
N/A
CPT0075560003
Tumor
N/A
CPT0001230001
Normal
N/A
CPT0079510001
Normal
N/A
CPT0066430001
Normal
N/A
CPT0001540009
Tumor
N/A
CPT0078990003
Tumor
N/A
CPT0065810003
Tumor
N/A
CPT0010120001
Normal
N/A
CPT0086870003
Tumor
N/A
CPT0075170001
Normal
N/A
CPT0000640003
Tumor
N/A
CPT0065870003
Tumor
N/A
CPT0088780001
Normal
N/A
CPT0086970003
Normal
N/A
CPT0079300001
Normal
N/A
CPT0092740003
Normal
N/A
CPT0085670003
Tumor
N/A
CPT0081880003
Tumor
N/A
CPT0013790003
Normal
N/A
CPT0012290003
Normal
N/A
CPT0087050003
Normal
N/A
CPT0009060003
Tumor
N/A
CPT0023690003
Tumor
N/A
CPT0001220008
Tumor
N/A
CPT0088480003
Tumor
N/A
CPT0026420001
Normal
N/A
CPT0079430001
Normal
N/A
CPT0000890001
Normal
N/A
CPT0086370003
Normal
N/A
CPT0025580004
Tumor
N/A
CPT0081990003
Tumor
N/A
CPT0025060001
Normal
N/A
CPT0075130003
Tumor
N/A
CPT0000660001
Normal
N/A
CPT0086820003
Tumor
N/A
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
