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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
ALDH4A1 is not prognostic in Liver Hepatocellular Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
119.6
Number of samples
362
Samples
Sample
Description
TPM
TCGA-DD-A4NP-01A
0 years, male, white, stage:Stage I, alive, 3308 days
445.6
TCGA-G3-A3CK-01A
0 years, male, asian, stage:Stage I, alive, 585 days
404.6
TCGA-DD-A1ED-01A
0 years, male, white, stage:Stage I, alive, 2301 days
345.1
TCGA-EP-A26S-01A
0 years, male, white, stage:Stage I, alive, 608 days
339.0
TCGA-MR-A520-01A
0 years, male, white, stage:Stage I, alive, 229 days
338.6
TCGA-ZS-A9CG-01A
0 years, male, white, stage:Stage II, alive, 341 days
336.3
TCGA-DD-AAE6-01A
0 years, female, asian, stage:Stage I, alive, 141 days
336.1
TCGA-DD-A3A6-01A
0 years, female, white, stage:Stage II, dead, 3258 days
330.0
TCGA-EP-A12J-01A
0 years, male, black or african american, stage:Stage I, alive, 570 days
321.1
TCGA-ZP-A9CV-01A
0 years, male, white, stage:'--, dead, 1088 days
316.0
TCGA-RC-A6M4-01A
0 years, female, white, stage:Stage IIIA, alive, 22 days
303.6
TCGA-DD-A73E-01A
0 years, male, white, stage:Stage I, alive, 44 days
303.1
TCGA-DD-A3A8-01A
0 years, male, white, stage:Stage II, dead, 11 days
302.8
TCGA-G3-A6UC-01A
0 years, male, white, stage:Stage IIIB, alive, 671 days
295.4
TCGA-ZP-A9D0-01A
0 years, female, black or african american, stage:'--, alive, 1091 days
289.4
TCGA-G3-AAV5-01A
0 years, male, white, stage:Stage II, alive, 354 days
289.2
TCGA-DD-AACK-01A
0 years, male, asian, stage:Stage I, alive, 9 days
285.9
TCGA-DD-AAVY-01A
0 years, male, asian, stage:Stage IIIA, alive, 1970 days
279.1
TCGA-DD-AADD-01A
0 years, male, asian, stage:Stage I, alive, 1231 days
277.4
TCGA-DD-A4NL-01A
0 years, male, white, stage:Stage I, alive, 1711 days
272.2
TCGA-DD-AADG-01A
0 years, male, asian, stage:Stage IIIA, alive, 1145 days
262.7
TCGA-5C-A9VG-01A
0 years, male, white, stage:Stage II, alive, 328 days
260.4
TCGA-DD-AADL-01A
0 years, male, asian, stage:Stage I, alive, 636 days
259.8
TCGA-DD-A4NK-01A
0 years, female, white, stage:Stage IIIA, dead, 1210 days
252.7
TCGA-XR-A8TE-01A
0 years, male, white, stage:Stage IIIA, alive, 925 days
252.2
TCGA-DD-A1EE-01A
0 years, male, white, stage:Stage IIIA, dead, 349 days
252.0
TCGA-G3-A3CI-01A
0 years, male, white, stage:Stage I, alive, 180 days
248.3
TCGA-DD-A4NF-01A
0 years, male, white, stage:Stage I, alive, 942 days
243.4
TCGA-DD-A3A4-01A
0 years, male, white, stage:Stage IIIA, dead, 612 days
240.8
TCGA-DD-AACX-01A
0 years, male, asian, stage:Stage II, alive, 170 days
240.6
TCGA-G3-A25V-01A
0 years, male, white, stage:Stage I, alive, 860 days
238.8
TCGA-ZP-A9D4-01A
0 years, female, white, stage:'--, alive, 395 days
235.4
TCGA-ZS-A9CD-01A
0 years, male, white, stage:Stage II, dead, 1386 days
229.5
TCGA-O8-A75V-01A
0 years, male, stage:Stage I, alive, 538 days
228.8
TCGA-FV-A3R2-01A
0 years, male, white, stage:Stage I, dead, 194 days
228.8
TCGA-G3-AAV3-01A
0 years, female, white, stage:Stage II, alive, 412 days
225.2
TCGA-BC-A3KF-01A
0 years, female, white, stage:Stage I, alive, 8 days
225.1
TCGA-5R-AAAM-01A
0 years, female, white, stage:Stage II, dead, 46 days
223.7
TCGA-FV-A3I1-01A
0 years, female, white, stage:Stage II, dead, 247 days
222.0
TCGA-DD-AAW1-01A
0 years, male, asian, stage:Stage IIIA, alive, 1989 days
217.9
TCGA-G3-AAV2-01A
0 years, male, white, stage:Stage I, alive, 372 days
210.5
TCGA-DD-AAEK-01A
0 years, male, asian, stage:Stage II, alive, 1067 days
208.3
TCGA-DD-A73A-01A
0 years, male, white, stage:Stage I, alive, 728 days
207.0
TCGA-BC-A69I-01A
0 years, male, white, stage:Stage I, alive, 387 days
205.9
TCGA-DD-AAVX-01A
0 years, male, asian, stage:Stage II, alive, 1718 days
204.6
TCGA-K7-A6G5-01A
0 years, male, white, stage:Stage I, alive, 512 days
202.9
TCGA-DD-AACT-01A
0 years, female, asian, stage:Stage I, alive, 1562 days
202.3
TCGA-BC-A10U-01A
0 years, male, white, stage:'--, dead, 837 days
198.7
TCGA-2Y-A9H8-01A
0 years, female, white, stage:'--, dead, 633 days
198.3
TCGA-ES-A2HT-01A
0 years, male, black or african american, stage:Stage I, dead, 438 days
197.6
TCGA-GJ-A6C0-01A
0 years, female, white, stage:Stage II, dead, 31 days
197.1
TCGA-DD-AAD2-01A
0 years, male, asian, stage:Stage I, alive, 658 days
196.3
TCGA-DD-A1EK-01A
0 years, female, white, stage:Stage IVB, dead, 558 days
194.3
TCGA-2Y-A9GV-01A
0 years, female, white, stage:Stage I, dead, 2532 days
193.1
TCGA-4R-AA8I-01A
0 years, male, white, stage:Stage II, dead, 262 days
192.1
TCGA-DD-AAW3-01A
0 years, male, asian, stage:Stage I, alive, 1633 days
191.5
TCGA-FV-A3R3-01A
0 years, female, white, stage:Stage I, dead, 366 days
191.3
TCGA-CC-5262-01A
0 years, male, asian, stage:Stage IIIC, dead, 103 days
191.2
TCGA-2Y-A9HA-01A
0 years, male, white, stage:Stage II, dead, 36 days
187.9
TCGA-DD-AAD0-01A
0 years, female, asian, stage:Stage I, alive, 137 days
186.8
TCGA-DD-A39W-01A
0 years, female, white, stage:Stage III, dead, 827 days
186.1
TCGA-G3-A7M7-01A
0 years, male, white, stage:Stage I, alive, 361 days
185.5
TCGA-ED-A4XI-01A
0 years, male, asian, stage:Stage II, alive, 819 days
185.4
TCGA-MI-A75H-01A
0 years, male, white, stage:'--, alive, 747 days
184.8
TCGA-2Y-A9H6-01A
0 years, female, white, stage:Stage I, alive, 357 days
183.7
TCGA-MI-A75C-01A
0 years, male, white, stage:Stage I, alive, 291 days
183.3
TCGA-G3-A5SL-01A
0 years, male, white, stage:Stage II, alive, 621 days
183.2
TCGA-ZP-A9CY-01A
0 years, female, white, stage:'--, alive, 782 days
179.3
TCGA-BC-A10R-01A
0 years, female, white, stage:'--, dead, 308 days
178.8
TCGA-DD-A4NR-01A
0 years, female, white, stage:Stage I, dead, 9 days
177.7
TCGA-RC-A6M5-01A
0 years, female, white, stage:Stage IVA, alive, 15 days
177.5
TCGA-DD-AAEI-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
176.8
TCGA-MI-A75E-01A
0 years, male, white, stage:Stage IIIC, alive, 507 days
175.5
TCGA-DD-A1EA-01A
0 years, male, asian, stage:Stage II, alive, 2415 days
173.7
TCGA-G3-AAV4-01A
0 years, female, white, stage:Stage I, dead, 27 days
173.6
TCGA-DD-AACU-01A
0 years, male, asian, stage:Stage I, alive, 1567 days
171.2
TCGA-DD-AACQ-01A
0 years, male, asian, stage:Stage II, dead, 432 days
171.1
TCGA-WX-AA44-01A
0 years, female, white, stage:Stage I, alive, 615 days
169.7
TCGA-BC-A10Z-01A
0 years, female, white, stage:Stage I, dead, 34 days
167.4
TCGA-G3-A7M8-01A
0 years, male, asian, stage:Stage I, alive, 430 days
166.2
TCGA-DD-A1EJ-01A
0 years, female, white, stage:Stage IIIC, dead, 1005 days
165.6
TCGA-ED-A627-01A
0 years, male, white, stage:Stage I, alive, 423 days
164.2
TCGA-DD-A4NV-01A
0 years, male, white, stage:Stage IIIA, alive, 2398 days
161.4
TCGA-CC-A7IH-01A
0 years, male, asian, stage:Stage IIIA, alive, 365 days
161.3
TCGA-CC-A9FW-01A
0 years, male, asian, stage:Stage IIIA, alive, 248 days
161.1
TCGA-LG-A9QD-01A
0 years, male, white, stage:Stage IIIA, alive, 366 days
160.5
TCGA-5R-AA1C-01A
0 years, male, white, stage:Stage II, alive, 520 days
159.9
TCGA-G3-A3CG-01A
0 years, male, white, stage:Stage I, alive, 673 days
159.8
TCGA-ED-A7PX-01A
0 years, female, asian, stage:Stage II, alive, 6 days
158.8
TCGA-G3-A25Z-01A
0 years, male, asian, stage:Stage I, alive, 655 days
156.7
TCGA-K7-A5RF-01A
0 years, male, white, stage:Stage I, alive, 631 days
156.6
TCGA-UB-A7MD-01A
0 years, male, black or african american, stage:Stage I, dead, 52 days
155.7
TCGA-LG-A9QC-01A
0 years, male, white, stage:Stage I, alive, 425 days
154.0
TCGA-DD-AAC9-01A
0 years, male, asian, stage:Stage I, alive, 347 days
153.6
TCGA-ZS-A9CE-01A
0 years, female, white, stage:Stage II, alive, 1241 days
153.5
TCGA-FV-A2QR-01A
0 years, male, white, stage:Stage I, dead, 581 days
152.3
TCGA-FV-A2QQ-01A
0 years, male, white, stage:Stage I, alive, 729 days
152.2
TCGA-HP-A5MZ-01A
0 years, male, stage:Stage I, dead, 91 days
151.8
TCGA-ED-A7PZ-01A
0 years, male, asian, stage:Stage II, alive, 6 days
151.7
TCGA-UB-AA0V-01A
0 years, female, white, stage:Stage I, alive, 314 days
151.7
TCGA-DD-A11D-01A
0 years, female, white, stage:Stage I, dead, 1560 days
151.5
TCGA-UB-AA0U-01A
0 years, male, white, stage:Stage II, alive, 327 days
151.2
TCGA-FV-A4ZQ-01A
0 years, male, white, stage:Stage I, alive, 12 days
150.9
TCGA-DD-AAE9-01A
0 years, male, asian, stage:Stage I, alive, 722 days
150.4
TCGA-RC-A7SK-01A
0 years, male, asian, stage:Stage I, alive, 472 days
150.1
TCGA-DD-AAW2-01A
0 years, male, asian, stage:Stage I, alive, 1855 days
149.9
TCGA-DD-A4ND-01A
0 years, female, white, stage:Stage I, alive, 2746 days
149.8
TCGA-DD-A4NS-01A
0 years, female, white, stage:Stage I, dead, 2456 days
147.4
TCGA-G3-A5SM-01A
0 years, male, white, stage:Stage II, alive, 520 days
147.1
TCGA-DD-AACB-01A
0 years, female, asian, stage:Stage I, alive, 2324 days
146.6
TCGA-WX-AA46-01A
0 years, male, white, stage:Stage II, alive, 756 days
146.4
TCGA-DD-AAVP-01A
0 years, male, asian, stage:Stage I, alive, 2752 days
146.0
TCGA-G3-A3CH-01A
0 years, male, asian, stage:Stage IIIA, alive, 780 days
145.3
TCGA-BC-A10X-01A
0 years, female, white, stage:Stage IIIA, dead, 770 days
145.2
TCGA-EP-A2KC-01A
0 years, male, black or african american, stage:Stage I, dead, 19 days
144.9
TCGA-2Y-A9HB-01A
0 years, male, stage:Stage I, alive, 260 days
144.4
TCGA-G3-A3CJ-01A
0 years, male, american indian or alaska native, stage:Stage II, alive, 594 days
144.2
TCGA-DD-A1EI-01A
0 years, male, asian, stage:Stage I, alive, 183 days
142.6
TCGA-GJ-A9DB-01A
0 years, male, white, stage:Stage I, dead, 67 days
142.6
TCGA-DD-A39Z-01A
0 years, female, stage:Stage II, dead, 601 days
142.5
TCGA-2Y-A9GZ-01A
0 years, female, white, stage:Stage II, dead, 848 days
141.8
TCGA-DD-A73B-01A
0 years, female, white, stage:Stage I, dead, 283 days
141.5
TCGA-2Y-A9GS-01A
0 years, male, white, stage:'--, dead, 724 days
141.3
TCGA-UB-A7MB-01A
0 years, male, white, stage:Stage II, alive, 601 days
141.3
TCGA-DD-A1EL-01A
0 years, male, black or african american, stage:Stage II, dead, 415 days
141.0
TCGA-CC-A8HU-01A
0 years, female, asian, stage:Stage IIIA, dead, 344 days
140.8
TCGA-BC-A10S-01A
0 years, male, white, stage:'--, dead, 1423 days
140.5
TCGA-KR-A7K0-01A
0 years, male, white, stage:Stage I, dead, 65 days
140.4
TCGA-DD-A4NJ-01A
0 years, female, white, stage:Stage II, alive, 928 days
138.3
TCGA-DD-A4NI-01A
0 years, male, white, stage:Stage II, alive, 816 days
136.0
TCGA-DD-A3A3-01A
0 years, male, asian, stage:Stage I, dead, 535 days
134.2
TCGA-2Y-A9GW-01A
0 years, male, white, stage:Stage I, dead, 1271 days
133.9
TCGA-T1-A6J8-01A
0 years, male, white, stage:'--, alive, 23 days
133.8
TCGA-DD-A1EG-01A
0 years, male, white, stage:Stage I, dead, 1372 days
132.7
TCGA-2Y-A9GU-01A
0 years, female, white, stage:Stage I, alive, 1939 days
132.4
TCGA-ED-A7XO-01A
0 years, male, asian, stage:Stage IIIA, alive, 427 days
131.8
TCGA-RC-A7SB-01A
0 years, male, asian, stage:Stage II, alive, 588 days
130.9
TCGA-3K-AAZ8-01A
0 years, male, black or african american, stage:Stage IIIB, alive, 396 days
130.8
TCGA-2Y-A9GT-01A
0 years, male, white, stage:Stage I, dead, 1624 days
130.6
TCGA-2Y-A9H9-01A
0 years, male, white, stage:Stage I, alive, 697 days
128.2
TCGA-DD-A4NB-01A
0 years, male, white, stage:Stage I, alive, 989 days
127.8
TCGA-DD-AAD3-01A
0 years, male, asian, stage:Stage I, alive, 1295 days
127.1
TCGA-G3-A5SK-01A
0 years, male, white, stage:Stage I, alive, 744 days
126.3
TCGA-BD-A3ER-01A
0 years, male, white, stage:Stage II, alive, 1115 days
125.1
TCGA-DD-AAW0-01A
0 years, male, asian, stage:Stage I, alive, 2015 days
124.8
TCGA-DD-A4NQ-01A
0 years, male, white, stage:Stage II, dead, 373 days
124.4
TCGA-CC-A5UE-01A
0 years, male, asian, stage:Stage IIIB, dead, 272 days
123.4
TCGA-CC-A7IL-01A
0 years, male, asian, stage:Stage IIIA, dead, 278 days
123.1
TCGA-MI-A75I-01A
0 years, male, black or african american, stage:'--, alive, 630 days
122.7
TCGA-ED-A8O6-01A
0 years, female, asian, stage:Stage IIIA, dead, 56 days
119.3
TCGA-ZP-A9D2-01A
0 years, male, white, stage:'--, dead, 765 days
119.1
TCGA-CC-A5UD-01A
0 years, male, asian, stage:Stage IIIA, dead, 304 days
118.7
TCGA-MI-A75G-01A
0 years, male, white, stage:Stage II, alive, 698 days
118.7
TCGA-DD-AAEE-01A
0 years, male, asian, stage:Stage I, alive, 810 days
118.3
TCGA-DD-A118-01A
0 years, female, white, stage:Stage II, alive, 3437 days
118.1
TCGA-DD-AADQ-01A
0 years, male, asian, stage:Stage II, alive, 436 days
117.8
TCGA-DD-AACE-01A
0 years, male, asian, stage:Stage I, alive, 2184 days
117.2
TCGA-DD-A3A5-01A
0 years, female, white, stage:Stage III, dead, 3125 days
116.7
TCGA-DD-AAEB-01A
0 years, male, asian, stage:Stage I, alive, 478 days
114.0
TCGA-EP-A3JL-01A
0 years, male, white, stage:Stage I, alive, 303 days
113.8
TCGA-DD-A39Y-01A
0 years, male, asian, stage:Stage I, dead, 171 days
113.2
TCGA-KR-A7K7-01A
0 years, female, white, stage:Stage II, alive, 951 days
113.0
TCGA-DD-AACA-01A
0 years, male, asian, stage:Stage I, alive, 2301 days
112.7
TCGA-G3-A7M6-01A
0 years, female, white, stage:Stage I, alive, 632 days
112.6
TCGA-DD-AAEG-01A
0 years, female, asian, stage:Stage I, alive, 719 days
110.9
TCGA-DD-A119-01A
0 years, male, asian, stage:Stage IV, dead, 223 days
110.7
TCGA-NI-A8LF-01A
0 years, male, white, stage:Stage I, alive, 799 days
110.7
TCGA-BC-A216-01A
0 years, female, white, stage:Stage IIIA, alive, 1351 days
110.1
TCGA-DD-AADW-01A
0 years, male, asian, stage:Stage I, alive, 587 days
109.7
TCGA-EP-A3RK-01A
0 years, male, white, stage:Stage IIIA, alive, 363 days
109.3
TCGA-PD-A5DF-01A
0 years, female, white, stage:Stage IIIB, dead, 639 days
108.4
TCGA-DD-AACY-01A
0 years, male, asian, stage:Stage I, alive, 1450 days
108.4
TCGA-DD-AADK-01A
0 years, female, asian, stage:Stage II, alive, 1049 days
108.4
TCGA-DD-AADV-01A
0 years, male, asian, stage:Stage I, alive, 574 days
107.8
TCGA-BD-A2L6-01A
0 years, male, white, stage:'--, alive, 1363 days
106.7
TCGA-FV-A23B-01A
0 years, female, white, stage:Stage II, dead, 1852 days
103.9
TCGA-DD-AAE2-01A
0 years, male, asian, stage:Stage I, alive, 638 days
103.7
TCGA-CC-5258-01A
0 years, male, asian, stage:Stage II, dead, 129 days
102.7
TCGA-DD-A73F-01A
0 years, female, white, stage:Stage I, alive, 1085 days
102.3
TCGA-DD-A1EH-01A
0 years, male, white, stage:Stage III, alive, 1495 days
101.7
TCGA-DD-AAVR-01A
0 years, male, asian, stage:Stage I, alive, 2513 days
101.7
TCGA-DD-AACL-01A
0 years, female, asian, stage:Stage I, dead, 107 days
101.5
TCGA-BC-A110-01A
0 years, female, black or african american, stage:'--, dead, 2116 days
101.3
TCGA-G3-A5SJ-01A
0 years, male, white, stage:Stage I, alive, 698 days
101.2
TCGA-WQ-A9G7-01A
0 years, female, white, stage:'--, alive, 30 days
100.6
TCGA-DD-AAD1-01A
0 years, female, asian, stage:Stage I, alive, 564 days
99.9
TCGA-DD-AACD-01A
0 years, male, asian, stage:Stage I, dead, 381 days
99.5
TCGA-RC-A6M6-01A
0 years, male, white, stage:Stage II, alive, 9 days
99.3
TCGA-DD-AAVU-01A
0 years, male, asian, stage:Stage II, alive, 2202 days
98.7
TCGA-ED-A7XP-01A
0 years, female, asian, stage:Stage II, alive, 400 days
98.2
TCGA-HP-A5N0-01A
0 years, female, stage:'--, dead, 752 days
98.1
TCGA-2Y-A9H4-01A
0 years, male, black or african american, stage:Stage I, alive, 1452 days
97.3
TCGA-DD-AAD8-01A
0 years, female, asian, stage:Stage I, alive, 1219 days
96.2
TCGA-DD-AAEA-01A
0 years, male, asian, stage:Stage I, alive, 575 days
95.9
TCGA-BC-A8YO-01A
0 years, female, white, stage:Stage IIIC, alive, 562 days
95.2
TCGA-KR-A7K2-01A
0 years, male, white, stage:Stage I, alive, 829 days
94.2
TCGA-G3-A25S-01A
0 years, male, white, stage:Stage I, dead, 416 days
93.9
TCGA-G3-AAV1-01A
0 years, male, asian, stage:Stage IIIC, dead, 359 days
93.7
TCGA-DD-AADB-01A
0 years, male, asian, stage:Stage I, alive, 1242 days
93.6
TCGA-DD-A73D-01A
0 years, female, white, stage:Stage II, alive, 693 days
92.9
TCGA-DD-AAEH-01A
0 years, male, asian, stage:Stage I, alive, 784 days
92.8
TCGA-DD-A11B-01A
0 years, male, white, stage:Stage I, dead, 14 days
92.2
TCGA-DD-A4NO-01A
0 years, male, white, stage:Stage I, alive, 2245 days
91.3
TCGA-BD-A3EP-01A
0 years, female, black or african american, stage:Stage I, alive, 409 days
91.0
TCGA-DD-AACS-01A
0 years, male, asian, stage:Stage I, alive, 1804 days
91.0
TCGA-DD-A1EC-01A
0 years, female, white, stage:Stage I, alive, 602 days
91.0
TCGA-FV-A496-01A
0 years, female, white, stage:Stage I, alive, 10 days
90.8
TCGA-G3-AAV7-01A
0 years, male, asian, stage:Stage II, alive, 361 days
90.6
TCGA-LG-A6GG-01A
0 years, female, white, stage:Stage II, alive, 387 days
90.3
TCGA-CC-A3MC-01A
0 years, male, asian, stage:Stage IIIA, alive, 363 days
89.3
TCGA-DD-AAE7-01A
0 years, male, asian, stage:Stage I, alive, 644 days
89.2
TCGA-BC-A10Q-01A
0 years, female, white, stage:'--, dead, 1135 days
89.0
TCGA-2Y-A9GY-01A
0 years, female, white, stage:Stage II, dead, 757 days
88.6
TCGA-BC-A69H-01A
0 years, male, white, stage:Stage II, alive, 444 days
88.6
TCGA-DD-AAVZ-01A
0 years, male, asian, stage:Stage I, alive, 1900 days
87.6
TCGA-DD-A1EF-01A
0 years, female, white, stage:Stage I, dead, 394 days
87.0
TCGA-G3-A7M5-01A
0 years, male, asian, stage:Stage I, alive, 447 days
86.6
TCGA-DD-AAC8-01A
0 years, male, asian, stage:Stage I, dead, 16 days
86.5
TCGA-ZS-A9CF-01A
0 years, male, white, stage:Stage II, alive, 2412 days
86.3
TCGA-XR-A8TC-01A
0 years, female, white, stage:Stage I, alive, 1339 days
86.1
TCGA-FV-A495-01A
0 years, female, white, stage:Stage II, alive, 1 days
85.8
TCGA-ES-A2HS-01A
0 years, male, white, stage:Stage I, dead, 688 days
85.4
TCGA-DD-AAVS-01A
0 years, male, asian, stage:Stage I, alive, 1823 days
85.2
TCGA-CC-5263-01A
0 years, male, asian, stage:Stage IIIA, dead, 129 days
85.2
TCGA-2Y-A9H7-01A
0 years, female, white, stage:Stage I, alive, 1168 days
83.9
TCGA-5R-AA1D-01A
0 years, female, white, stage:Stage IIIA, alive, 449 days
83.1
TCGA-DD-A113-01A
0 years, female, white, stage:Stage II, alive, 2425 days
82.5
TCGA-2Y-A9H0-01A
0 years, male, white, stage:Stage IIIA, alive, 3675 days
82.3
TCGA-5C-A9VH-01A
0 years, male, white, stage:Stage I, alive, 322 days
81.8
TCGA-ED-A97K-01A
0 years, male, asian, stage:Stage IIIA, alive, 6 days
81.2
TCGA-CC-A7IG-01A
0 years, male, asian, stage:Stage II, dead, 299 days
80.7
TCGA-BC-A10Y-01A
0 years, male, white, stage:'--, dead, 711 days
80.5
TCGA-DD-A73G-01A
0 years, female, white, stage:Stage I, alive, 3478 days
80.4
TCGA-QA-A7B7-01A
0 years, male, black or african american, stage:Stage II, alive, 94 days
79.7
TCGA-CC-A7IK-01A
0 years, male, asian, stage:Stage IIIA, dead, 262 days
79.5
TCGA-2Y-A9GX-01A
0 years, male, white, stage:Stage I, alive, 2442 days
79.2
TCGA-DD-AACZ-01A
0 years, female, asian, stage:Stage I, dead, 171 days
79.1
TCGA-WJ-A86L-01A
0 years, female, white, stage:Stage I, alive, 345 days
79.1
TCGA-CC-A5UC-01A
0 years, male, asian, stage:Stage IIIA, dead, 347 days
78.8
TCGA-WX-AA47-01A
0 years, female, white, stage:Stage IIIA, dead, 556 days
78.8
TCGA-DD-A4NG-01A
0 years, male, white, stage:Stage IIIA, dead, 802 days
78.3
TCGA-DD-A4NE-01A
0 years, female, white, stage:Stage IIIA, dead, 660 days
77.4
TCGA-WQ-AB4B-01A
0 years, male, white, stage:Stage II, alive, 395 days
77.1
TCGA-G3-A25U-01A
0 years, female, asian, stage:Stage I, alive, 1636 days
76.5
TCGA-DD-AACN-01A
0 years, male, asian, stage:Stage I, alive, 1302 days
75.9
TCGA-CC-A8HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 140 days
75.5
TCGA-DD-A116-01A
0 years, male, asian, stage:Stage IIIA, dead, 1622 days
75.5
TCGA-DD-AACW-01A
0 years, male, asian, stage:Stage I, alive, 1424 days
75.5
TCGA-CC-5264-01A
0 years, male, asian, stage:Stage IIIA, dead, 102 days
74.9
TCGA-EP-A2KA-01A
0 years, female, white, stage:Stage IIIA, dead, 627 days
74.3
TCGA-DD-AADN-01A
0 years, male, asian, stage:Stage I, alive, 898 days
74.0
TCGA-G3-AAV6-01A
0 years, female, white, stage:Stage IIIA, dead, 65 days
71.8
TCGA-2Y-A9H5-01A
0 years, female, white, stage:Stage I, dead, 555 days
71.3
TCGA-DD-A3A9-01A
0 years, female, white, stage:Stage IVB, dead, 931 days
70.8
TCGA-BW-A5NO-01A
0 years, male, black or african american, stage:Stage IIIA, alive, 20 days
70.6
TCGA-DD-AACJ-01A
0 years, male, asian, stage:Stage II, alive, 2102 days
70.5
TCGA-DD-A4NH-01A
0 years, female, white, stage:Stage IIIB, alive, 917 days
70.3
TCGA-G3-A25Y-01A
0 years, female, asian, stage:Stage I, dead, 452 days
70.0
TCGA-DD-AADY-01A
0 years, female, asian, stage:Stage I, alive, 555 days
70.0
TCGA-ED-A66X-01A
0 years, male, asian, stage:Stage IIIA, alive, 406 days
69.2
TCGA-CC-5261-01A
0 years, male, asian, stage:Stage II, dead, 97 days
68.9
TCGA-DD-AADJ-01A
0 years, female, asian, stage:Stage I, alive, 1066 days
68.5
TCGA-G3-AAUZ-01A
0 years, male, stage:Stage I, alive, 480 days
67.8
TCGA-ZP-A9CZ-01A
0 years, male, asian, stage:'--, alive, 706 days
67.2
TCGA-ED-A66Y-01A
0 years, female, asian, stage:Stage IIIA, dead, 296 days
67.0
TCGA-YA-A8S7-01A
0 years, male, white, stage:Stage IIIA, dead, 412 days
65.9
TCGA-CC-A3MB-01A
0 years, male, asian, stage:Stage IIIA, dead, 315 days
65.7
TCGA-K7-AAU7-01A
0 years, male, white, stage:Stage II, alive, 359 days
65.5
TCGA-KR-A7K8-01A
0 years, male, stage:Stage I, alive, 906 days
65.3
TCGA-DD-AAE4-01A
0 years, female, asian, stage:Stage I, alive, 608 days
65.2
TCGA-2Y-A9H1-01A
0 years, male, white, stage:Stage I, dead, 1229 days
64.7
TCGA-DD-AADU-01A
0 years, male, asian, stage:Stage II, alive, 554 days
64.3
TCGA-XR-A8TD-01A
0 years, female, white, stage:Stage IIIB, alive, 1030 days
63.9
TCGA-K7-A5RG-01A
0 years, male, black or african american, stage:Stage I, alive, 519 days
63.7
TCGA-2Y-A9H2-01A
0 years, female, white, stage:Stage I, alive, 1731 days
63.5
TCGA-CC-A8HS-01A
0 years, male, asian, stage:Stage IIIC, dead, 300 days
63.3
TCGA-DD-AACF-01A
0 years, male, asian, stage:Stage I, dead, 365 days
62.9
TCGA-RG-A7D4-01A
0 years, male, black or african american, stage:Stage II, alive, 1098 days
61.6
TCGA-DD-AAVV-01A
0 years, male, asian, stage:Stage II, alive, 2455 days
61.5
TCGA-DD-A39X-01A
0 years, female, white, stage:Stage I, dead, 1694 days
60.1
TCGA-GJ-A3OU-01A
0 years, male, white, stage:Stage I, alive, 879 days
59.8
TCGA-RC-A7S9-01A
0 years, female, asian, stage:Stage I, alive, 640 days
59.7
TCGA-CC-A8HV-01A
0 years, female, asian, stage:Stage II, dead, 279 days
57.8
TCGA-DD-AAE0-01A
0 years, female, asian, stage:Stage IIIA, alive, 555 days
57.8
TCGA-DD-AAE1-01A
0 years, male, asian, stage:Stage I, alive, 552 days
57.1
TCGA-ED-A459-01A
0 years, male, asian, stage:Stage II, alive, 910 days
56.5
TCGA-DD-AADS-01A
0 years, male, asian, stage:Stage I, alive, 474 days
55.7
TCGA-DD-A4NN-01A
0 years, female, white, stage:Stage I, dead, 899 days
55.2
TCGA-DD-A115-01A
0 years, male, white, stage:Stage IIIA, dead, 2542 days
55.0
TCGA-ED-A8O5-01A
0 years, female, asian, stage:Stage IIIA, alive, 406 days
54.6
TCGA-DD-A39V-01A
0 years, male, white, stage:Stage II, dead, 643 days
54.3
TCGA-DD-AACC-01A
0 years, male, asian, stage:Stage I, dead, 1685 days
53.4
TCGA-5C-AAPD-01A
0 years, male, asian, stage:Stage II, alive, 20 days
53.3
TCGA-DD-AADM-01A
0 years, male, asian, stage:Stage II, dead, 12 days
53.2
TCGA-CC-A7IF-01A
0 years, male, asian, stage:Stage IIIA, dead, 649 days
53.1
TCGA-DD-AACP-01A
0 years, male, asian, stage:Stage I, alive, 415 days
52.1
TCGA-DD-AA3A-01A
0 years, female, white, stage:Stage I, dead, 410 days
50.3
TCGA-DD-AACV-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
50.3
TCGA-DD-AADP-01A
0 years, male, asian, stage:Stage I, alive, 458 days
50.1
TCGA-DD-A114-01A
0 years, male, black or african american, stage:Stage II, dead, 1149 days
49.9
TCGA-MR-A8JO-01A
0 years, male, white, stage:Stage I, alive, 330 days
47.5
TCGA-XR-A8TF-01A
0 years, male, white, stage:Stage I, dead, 693 days
47.3
TCGA-DD-AADO-01A
0 years, male, asian, stage:Stage I, alive, 453 days
47.1
TCGA-DD-AAVW-01A
0 years, male, asian, stage:Stage I, alive, 2317 days
46.9
TCGA-DD-A11C-01A
0 years, male, white, stage:Stage I, alive, 662 days
46.2
TCGA-G3-AAV0-01A
0 years, male, asian, stage:Stage I, alive, 476 days
45.7
TCGA-UB-A7MF-01A
0 years, male, white, stage:Stage IIIA, dead, 214 days
45.7
TCGA-ED-A82E-01A
0 years, female, asian, stage:Stage IIIA, alive, 408 days
44.8
TCGA-DD-A3A1-01A
0 years, male, stage:Stage IIIA, dead, 233 days
44.8
TCGA-DD-AAVQ-01A
0 years, male, asian, stage:Stage I, alive, 2728 days
44.2
TCGA-RC-A7SH-01A
0 years, male, asian, stage:Stage II, alive, 468 days
43.5
TCGA-EP-A2KB-01A
0 years, female, white, stage:Stage I, dead, 596 days
43.0
TCGA-DD-A3A7-01A
0 years, male, stage:Stage IIIB, dead, 419 days
42.6
TCGA-G3-A25T-01A
0 years, female, white, stage:Stage IIIA, alive, 1553 days
42.4
TCGA-2Y-A9H3-01A
0 years, male, white, stage:Stage II, alive, 1516 days
42.0
TCGA-ZP-A9D1-01A
0 years, female, white, stage:'--, alive, 21 days
40.7
TCGA-FV-A3I0-01A
0 years, female, white, stage:Stage II, alive, 848 days
39.1
TCGA-DD-AAD5-01A
0 years, male, asian, stage:Stage I, alive, 1345 days
38.7
TCGA-NI-A4U2-01A
0 years, male, white, stage:Stage IIIA, dead, 1791 days
38.3
TCGA-UB-A7ME-01A
0 years, male, asian, stage:Stage I, alive, 486 days
38.1
TCGA-DD-AAD6-01A
0 years, male, asian, stage:Stage IIIA, alive, 672 days
36.8
TCGA-BC-A10T-01A
0 years, male, white, stage:'--, dead, 837 days
36.6
TCGA-DD-AADR-01A
0 years, male, asian, stage:Stage I, alive, 2028 days
36.6
TCGA-RC-A7SF-01A
0 years, male, asian, stage:Stage I, alive, 579 days
35.5
TCGA-ED-A5KG-01A
0 years, female, asian, stage:Stage II, alive, 854 days
35.4
TCGA-G3-A5SI-01A
0 years, male, asian, stage:Stage II, dead, 768 days
35.2
TCGA-DD-AADI-01A
0 years, female, asian, stage:Stage I, alive, 1085 days
34.6
TCGA-DD-AADA-01A
0 years, female, asian, stage:Stage I, alive, 1233 days
34.2
TCGA-DD-AADF-01A
0 years, female, asian, stage:Stage I, dead, 115 days
33.8
TCGA-BC-A10W-01A
0 years, male, asian, stage:'--, dead, 91 days
33.8
TCGA-DD-A3A2-01A
0 years, female, white, stage:Stage I, dead, 2131 days
32.7
TCGA-DD-AADC-01A
0 years, male, asian, stage:Stage I, dead, 425 days
32.7
TCGA-DD-AAE3-01A
0 years, male, asian, stage:Stage I, alive, 566 days
32.6
TCGA-DD-A73C-01A
0 years, female, white, stage:Stage IIIA, alive, 701 days
31.0
TCGA-DD-AACH-01A
0 years, male, asian, stage:Stage II, dead, 195 days
30.9
TCGA-UB-A7MA-01A
0 years, female, white, stage:Stage II, alive, 848 days
30.2
TCGA-XR-A8TG-01A
0 years, male, white, stage:Stage I, alive, 898 days
30.2
TCGA-UB-A7MC-01A
0 years, male, white, stage:Stage IIIA, alive, 500 days
29.8
TCGA-BC-A217-01A
0 years, female, white, stage:Stage II, dead, 1397 days
29.7
TCGA-BC-A5W4-01A
0 years, male, white, stage:Stage IIIA, dead, 547 days
29.5
TCGA-FV-A4ZP-01A
0 years, male, white, stage:Stage IIIA, dead, 2486 days
28.9
TCGA-CC-A3MA-01A
0 years, male, asian, stage:Stage IIIA, dead, 303 days
28.5
TCGA-DD-AACI-01A
0 years, male, asian, stage:Stage II, alive, 1618 days
28.3
TCGA-DD-AACG-01A
0 years, male, asian, stage:Stage II, dead, 469 days
28.1
TCGA-ED-A7PY-01A
0 years, female, asian, stage:Stage II, alive, 390 days
26.4
TCGA-CC-5259-01A
0 years, female, asian, stage:Stage IIIC, alive, 250 days
26.2
TCGA-CC-A9FS-01A
0 years, male, asian, stage:Stage II, alive, 211 days
25.5
TCGA-DD-A4NA-01A
0 years, female, white, stage:Stage IIIC, alive, 1008 days
25.2
TCGA-DD-AACO-01A
0 years, male, asian, stage:Stage I, alive, 1876 days
24.5
TCGA-DD-AAED-01A
0 years, male, asian, stage:Stage I, alive, 763 days
24.2
TCGA-G3-A25X-01A
0 years, male, asian, stage:Stage II, alive, 1779 days
22.3
TCGA-CC-A1HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 101 days
22.0
TCGA-CC-A7IE-01A
0 years, male, asian, stage:Stage IIIA, dead, 217 days
21.3
TCGA-DD-A1EB-01A
0 years, female, stage:Stage I, alive, 2017 days
21.0
TCGA-BC-A3KG-01A
0 years, female, white, stage:Stage II, alive, 680 days
20.9
TCGA-G3-A7M9-01A
0 years, male, white, stage:Stage IIIB, dead, 56 days
20.9
TCGA-CC-A123-01A
0 years, female, asian, stage:Stage IIIA, alive, 219 days
20.1
TCGA-BC-A112-01A
0 years, male, white, stage:'--, dead, 153 days
13.9
TCGA-CC-A7II-01A
0 years, male, asian, stage:Stage IIIA, alive, 399 days
13.2
TCGA-CC-A7IJ-01A
0 years, male, asian, stage:Stage II, alive, 382 days
11.9
TCGA-CC-5260-01A
0 years, female, asian, stage:Stage IIIC, dead, 87 days
8.5
TCGA-CC-A3M9-01A
0 years, male, asian, stage:Stage IIIA, dead, 300 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
ALDH4A1 is not prognostic in Liver Hepatocellular Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
76.5
Number of samples
231
Samples
Sample
Description
TPM
DO50822
0 years, male, NA, stage:2, alive, 510 days
342.3
DO45131
0 years, male, NA, stage:4, dead, 360 days
248.1
DO48751
0 years, male, NA, stage:2, dead, 480 days
211.4
DO45217
0 years, female, NA, stage:3, dead, 270 days
209.0
DO48695
0 years, male, NA, stage:2, alive, 720 days
207.2
DO50802
0 years, male, NA, stage:2, alive, 930 days
197.5
DO45227
0 years, female, NA, stage:2, alive, 1020 days
195.8
DO23540
0 years, male, NA, stage:1, alive, 750 days
169.9
DO50787
0 years, male, NA, stage:3, alive, 480 days
168.8
DO45163
0 years, male, NA, stage:2, alive, 960 days
166.3
DO45267
0 years, male, NA, stage:3, dead, 570 days
166.0
DO48672
0 years, male, NA, stage:2, alive, 450 days
165.4
DO50804
0 years, male, NA, stage:2, alive, 720 days
160.7
DO50809
0 years, male, NA, stage:3, dead, 720 days
153.6
DO23532
0 years, female, NA, stage:1, alive, 960 days
150.1
DO50839
0 years, female, NA, stage:3, alive, 330 days
148.0
DO45153
0 years, female, NA, stage:2, alive, 1380 days
147.2
DO45161
0 years, male, NA, stage:2, dead, 540 days
144.0
DO50776
0 years, male, NA, stage:1, alive, 690 days
143.7
DO45171
0 years, male, NA, stage:3, alive, 600 days
143.2
DO45215
0 years, male, NA, stage:2, alive, 1170 days
142.4
DO45125
0 years, male, NA, stage:3, alive, 1680 days
139.5
DO50816
0 years, male, NA, stage:2, alive, 390 days
137.6
DO48757
0 years, female, NA, stage:3, alive, 480 days
136.8
DO50811
0 years, male, NA, stage:1, alive, 450 days
136.4
DO50783
0 years, male, NA, stage:3, alive, 480 days
136.0
DO50799
0 years, female, NA, stage:2, alive, 540 days
131.8
DO23508
0 years, female, NA, stage:2, alive, 390 days
129.4
DO48716
0 years, male, NA, stage:2, alive, 720 days
129.4
DO45177
0 years, female, NA, stage:3, alive, 1260 days
127.6
DO48712
0 years, male, NA, stage:2, alive, 810 days
127.4
DO23526
0 years, male, NA, stage:3, alive, 1050 days
127.1
DO23534
0 years, male, NA, stage:2, alive, 840 days
126.0
DO45255
0 years, male, NA, stage:3, alive, 720 days
125.5
DO45197
0 years, male, NA, stage:2, alive, 1170 days
123.9
DO45281
0 years, male, NA, stage:4, alive, 750 days
121.9
DO45165
0 years, male, NA, stage:2, alive, 690 days
120.8
DO48677
0 years, male, NA, stage:3, alive, 1140 days
120.0
DO23542
0 years, male, NA, stage:3, alive, 960 days
119.3
DO45143
0 years, male, NA, stage:3, alive, 1290 days
118.2
DO50817
0 years, male, NA, stage:2, alive, 390 days
117.9
DO45094
0 years, male, NA, stage:3, alive, 1650 days
117.7
DO23529
0 years, male, NA, stage:4, alive, 930 days
115.0
DO48743
0 years, female, NA, stage:2, alive, 570 days
114.0
DO23514
0 years, male, NA, stage:2, alive, 1290 days
112.9
DO45095
0 years, male, NA, stage:2, alive, 1620 days
112.4
DO50818
0 years, male, NA, stage:2, alive, 510 days
110.9
DO45179
0 years, female, NA, stage:2, alive, 600 days
110.8
DO50805
0 years, male, NA, stage:2, alive, 690 days
110.0
DO45133
0 years, male, NA, stage:3, dead, 660 days
107.7
DO48760
0 years, female, NA, stage:2, alive, 690 days
106.0
DO45195
0 years, male, NA, stage:1, alive, 390 days
105.5
DO50813
0 years, male, NA, stage:2, alive, 420 days
104.9
DO23527
0 years, male, NA, stage:1, alive, 1050 days
102.7
DO45119
0 years, male, NA, stage:3, dead, 510 days
101.5
DO50800
0 years, male, NA, stage:2, alive, 510 days
101.2
DO23533
0 years, male, NA, stage:2, alive, 900 days
100.4
DO48701
0 years, male, NA, stage:2, alive, 780 days
99.8
DO45229
0 years, male, NA, stage:1, alive, 990 days
99.2
DO48706
0 years, male, NA, stage:2, alive, 870 days
98.9
DO48746
0 years, male, NA, stage:3, alive, 570 days
98.7
DO45209
0 years, male, NA, stage:4, alive, 1350 days
96.6
DO48693
0 years, male, NA, stage:2, alive, 900 days
96.5
DO45259
0 years, male, NA, stage:3, alive, 330 days
96.3
DO45092
0 years, male, NA, stage:4, dead, 1200 days
96.2
DO50832
0 years, male, NA, stage:3, alive, 90 days
96.1
DO45105
0 years, male, NA, stage:1, alive, 1680 days
95.7
DO23525
0 years, male, NA, stage:4, alive, 1050 days
95.2
DO50806
0 years, male, NA, stage:4, alive, 540 days
93.7
DO45093
0 years, male, NA, stage:2, dead, 720 days
93.4
DO23516
0 years, male, NA, stage:3, dead, 20 days
93.4
DO23549
0 years, male, NA, stage:3, alive, 990 days
92.6
DO45107
0 years, female, NA, stage:2, alive, 1710 days
91.3
DO45096
0 years, male, NA, stage:2, dead, 1290 days
90.9
DO48674
0 years, male, NA, stage:2, alive, 1260 days
89.8
DO48723
0 years, male, NA, stage:1, alive, 600 days
87.4
DO48742
0 years, male, NA, stage:2, alive, 600 days
87.2
DO23539
0 years, male, NA, stage:1, alive, 1110 days
86.8
DO45117
0 years, female, NA, stage:2, dead, 1110 days
86.6
DO48704
0 years, female, NA, stage:3, alive, 750 days
86.2
DO45183
0 years, female, NA, stage:2, dead, 570 days
86.2
DO48679
0 years, male, NA, stage:2, alive, 1200 days
84.5
DO50829
0 years, male, NA, stage:3, alive, 570 days
84.3
DO45199
0 years, female, NA, stage:2, alive, 1350 days
84.3
DO45235
0 years, female, NA, stage:1, alive, 900 days
83.8
DO23548
0 years, female, NA, stage:1, alive, 840 days
83.6
DO227801
0 years, female, NA, stage:1, alive, 660 days
83.6
DO23550
0 years, male, NA, stage:1, alive, 990 days
83.2
DO48730
0 years, female, NA, stage:2, alive, 630 days
82.5
DO45207
0 years, male, NA, stage:1, alive, 1050 days
82.4
DO50798
0 years, male, NA, stage:3, dead, 30 days
81.1
DO45181
0 years, female, NA, stage:2, alive, 1200 days
81.0
DO48719
0 years, male, NA, stage:2, alive, 690 days
81.0
DO50859
0 years, male, NA, stage:2, alive, 180 days
80.2
DO48759
0 years, male, NA, stage:3, alive, 720 days
79.9
DO50774
0 years, female, NA, stage:2, alive, 720 days
79.3
DO45101
0 years, male, NA, stage:2, alive, 1680 days
77.9
DO50791
0 years, female, NA, stage:1, dead, 480 days
77.6
DO45221
0 years, female, NA, stage:4, dead, 390 days
77.6
DO45099
0 years, male, NA, stage:3, alive, 1590 days
77.4
DO45129
0 years, male, NA, stage:3, alive, 1470 days
75.9
DO48741
0 years, male, NA, stage:3, alive, 240 days
74.9
DO23510
0 years, female, NA, stage:2, alive, 870 days
73.4
DO23524
0 years, female, NA, stage:2, alive, 1050 days
72.3
DO23511
0 years, female, NA, stage:3, dead, 180 days
72.3
DO50803
0 years, female, NA, stage:1, alive, 540 days
72.2
DO45253
0 years, male, NA, stage:2, alive, 870 days
71.3
DO23538
0 years, male, NA, stage:2, alive, 450 days
71.3
DO23544
0 years, male, NA, stage:2, alive, 960 days
71.1
DO45193
0 years, female, NA, stage:4, dead, 120 days
70.9
DO45231
0 years, male, NA, stage:2, alive, 930 days
70.3
DO45139
0 years, male, NA, stage:3, alive, 1320 days
70.1
DO45175
0 years, male, NA, stage:2, alive, 1140 days
69.7
DO45219
0 years, male, NA, stage:2, alive, 1080 days
68.4
DO48700
0 years, female, NA, stage:2, alive, 810 days
66.8
DO45111
0 years, male, NA, stage:2, alive, 1590 days
66.4
DO45203
0 years, female, NA, stage:2, alive, 1170 days
65.5
DO45241
0 years, male, NA, stage:1, alive, 1080 days
64.8
DO50840
0 years, male, NA, stage:2, alive, 330 days
64.3
DO23512
0 years, male, NA, stage:1, alive, 1260 days
63.6
DO45097
0 years, male, NA, stage:3, alive, 1620 days
63.5
DO48721
0 years, female, NA, stage:1, alive, 900 days
63.1
DO45113
0 years, male, NA, stage:3, alive, 1560 days
62.8
DO48681
0 years, male, NA, stage:2, alive, 900 days
62.7
DO45223
0 years, male, NA, stage:4, alive, 1020 days
62.0
DO48725
0 years, male, NA, stage:1, alive, 780 days
60.9
DO48737
0 years, male, NA, stage:1, alive, 720 days
60.8
DO50814
0 years, male, NA, stage:3, alive, 420 days
60.8
DO45159
0 years, male, NA, stage:3, alive, 1470 days
60.8
DO23551
0 years, male, NA, stage:3, dead, 150 days
60.7
DO45109
0 years, male, NA, stage:2, alive, 1590 days
60.3
DO50793
0 years, male, NA, stage:4, alive, 540 days
60.0
DO45257
0 years, male, NA, stage:3, alive, 810 days
59.8
DO45233
0 years, male, NA, stage:3, alive, 900 days
59.5
DO50820
0 years, female, NA, stage:3, alive, 510 days
59.4
DO23535
0 years, male, NA, stage:1, alive, 960 days
59.1
DO45261
0 years, male, NA, stage:3, alive, 990 days
59.0
DO23541
0 years, male, NA, stage:2, alive, 930 days
58.9
DO23528
0 years, female, NA, stage:2, alive, 1020 days
58.9
DO45173
0 years, male, NA, stage:3, alive, 1170 days
58.1
DO50778
0 years, male, NA, stage:4, alive, 630 days
57.6
DO45191
0 years, female, NA, stage:2, alive, 1200 days
57.1
DO48697
0 years, female, NA, stage:2, dead, 810 days
56.7
DO23518
0 years, male, NA, stage:2, alive, 1320 days
56.3
DO45141
0 years, male, NA, stage:2, alive, 1320 days
55.3
DO227643
0 years, male, NA, stage:2, alive, 1260 days
55.2
DO45123
0 years, female, NA, stage:2, dead, 570 days
54.8
DO50850
0 years, male, NA, stage:3, alive, 720 days
53.4
DO45205
0 years, female, NA, stage:2, dead, 90 days
53.3
DO45157
0 years, male, NA, stage:2, alive, 1980 days
53.2
DO50825
0 years, male, NA, stage:2, alive, 390 days
53.1
DO45103
0 years, male, NA, stage:3, alive, 450 days
52.7
DO45169
0 years, male, NA, stage:3, alive, 1350 days
52.6
DO48736
0 years, female, NA, stage:1, alive, 600 days
52.4
DO45189
0 years, female, NA, stage:2, alive, 1200 days
52.4
DO48733
0 years, male, NA, stage:2, alive, 600 days
52.2
DO50807
0 years, male, NA, stage:1, alive, 540 days
51.6
DO45167
0 years, male, NA, stage:2, dead, 1440 days
51.5
DO45283
0 years, male, NA, stage:3, alive, 510 days
51.3
DO23543
0 years, male, NA, stage:2, alive, 1020 days
51.2
DO23513
0 years, male, NA, stage:3, alive, 1200 days
50.8
DO23517
0 years, male, NA, stage:2, alive, 1200 days
49.9
DO45149
0 years, female, NA, stage:2, alive, 1260 days
49.7
DO50789
0 years, female, NA, stage:2, alive, 570 days
49.0
DO48715
0 years, female, NA, stage:2, dead, 690 days
48.9
DO45187
0 years, female, NA, stage:1, alive, 1260 days
48.6
DO48732
0 years, male, NA, stage:3, alive, 630 days
48.3
DO50844
0 years, male, NA, stage:4, alive, 300 days
46.5
DO50855
0 years, male, NA, stage:2, alive, 570 days
46.2
DO23546
0 years, male, NA, stage:2, alive, 1050 days
45.9
DO50785
0 years, male, NA, stage:4, dead, 90 days
45.8
DO45273
0 years, male, NA, stage:2, alive, 480 days
45.1
DO45269
0 years, male, NA, stage:3, alive, 750 days
44.6
DO45091
0 years, male, NA, stage:2, dead, 1320 days
44.2
DO50815
0 years, male, NA, stage:3, alive, 150 days
44.1
DO23531
0 years, female, NA, stage:3, alive, 900 days
42.8
DO45135
0 years, male, NA, stage:1, alive, 1410 days
42.0
DO45121
0 years, male, NA, stage:3, alive, 1530 days
42.0
DO45243
0 years, female, NA, stage:3, alive, 930 days
41.9
DO23537
0 years, male, NA, stage:2, dead, 900 days
41.7
DO48682
0 years, female, NA, stage:3, dead, 120 days
41.6
DO50819
0 years, female, NA, stage:2, alive, 510 days
41.5
DO45155
0 years, male, NA, stage:2, alive, 2160 days
41.0
DO48761
0 years, male, NA, stage:2, alive, 870 days
41.0
DO45201
0 years, male, NA, stage:1, alive, 900 days
40.8
DO45115
0 years, male, NA, stage:2, alive, 840 days
39.3
DO45265
0 years, male, NA, stage:3, alive, 1020 days
39.1
DO48717
0 years, male, NA, stage:4, dead, 180 days
38.9
DO50857
0 years, male, NA, stage:2, alive, 210 days
38.8
DO45263
0 years, male, NA, stage:3, dead, 270 days
38.7
DO23545
0 years, male, NA, stage:2, dead, 570 days
38.5
DO23515
0 years, male, NA, stage:2, alive, 1230 days
38.1
DO45239
0 years, male, NA, stage:2, alive, 870 days
38.0
DO45185
0 years, male, NA, stage:2, alive, 600 days
37.8
DO45213
0 years, male, NA, stage:1, alive, 1200 days
37.3
DO45225
0 years, male, NA, stage:1, alive, 1050 days
35.6
DO45237
0 years, male, NA, stage:2, alive, 900 days
34.1
DO23509
0 years, male, NA, stage:3, dead, 780 days
33.1
DO23552
0 years, female, NA, stage:1, alive, 810 days
32.2
DO45137
0 years, male, NA, stage:1, alive, 1320 days
30.7
DO48727
0 years, female, NA, stage:2, dead, 390 days
29.0
DO45275
0 years, male, NA, stage:3, dead, 10 days
28.7
DO48728
0 years, female, NA, stage:2, alive, 150 days
27.6
DO23547
0 years, male, NA, stage:1, alive, 1020 days
27.5
DO23536
0 years, male, NA, stage:2, alive, 930 days
26.8
DO45247
0 years, female, NA, stage:2, alive, 210 days
26.6
DO45303
0 years, female, NA, stage:3, alive, 990 days
24.9
DO50808
0 years, male, NA, stage:2, alive, 570 days
23.6
DO50845
0 years, male, NA, stage:3, alive, 210 days
23.1
DO23530
0 years, male, NA, stage:4, dead, 180 days
22.5
DO45301
0 years, male, NA, stage:2, dead, 1440 days
21.2
DO45249
0 years, male, NA, stage:1, alive, 630 days
20.8
DO45127
0 years, male, NA, stage:3, dead, 420 days
19.1
DO45277
0 years, male, NA, stage:3, alive, 600 days
18.6
DO48720
0 years, female, NA, stage:2, alive, 570 days
16.0
DO23519
0 years, male, NA, stage:3, alive, 630 days
16.0
DO45251
0 years, female, NA, stage:2, alive, 900 days
13.0
DO45299
0 years, female, NA, stage:1, alive, 1440 days
12.1
DO23521
0 years, male, NA, stage:3, alive, 1110 days
11.8
DO48747
0 years, male, NA, stage:3, alive, 540 days
11.1
DO45211
0 years, male, NA, stage:3, alive, 240 days
10.7
DO23523
0 years, male, NA, stage:3, alive, 1080 days
9.4
DO45305
0 years, male, NA, stage:4, alive, 300 days
6.5
DO45289
0 years, female, NA, stage:3, alive, 360 days
6.4
DO45287
0 years, male, NA, stage:1, alive, 390 days
5.7
DO45307
0 years, female, NA, stage:4, dead, 240 days
4.3
DO45145
0 years, male, NA, stage:3, dead, 60 days
3.8
DO45245
0 years, female, NA, stage:2, dead, 240 days
3.8
DO45285
0 years, male, NA, stage:3, alive, 480 days
3.5
DO45297
0 years, female, NA, stage:4, dead, 1260 days
2.6
DO45279
0 years, male, NA, stage:3, alive, 1290 days
2.4
Show allShow less
LIVER HEPATOCELLULAR CARCINOMA - Protein relative expression (CPTAC)
Number of samples
330
Samples
Sample ID
Sample type
nRPX
627
Tumor
1.3
981
Tumor
1.3
911
Tumor
1.1
465
Tumor
1.0
1041
Tumor
0.9
915
Tumor
0.9
636
Normal
0.9
868
Normal
0.9
513
Tumor
0.8
558
Normal
0.8
698
Normal
0.7
786
Normal
0.7
696
Normal
0.7
648
Normal
0.7
462
Normal
0.7
756
Normal
0.7
824
Normal
0.7
172
Normal
0.7
528
Normal
0.7
356
Normal
0.7
858
Normal
0.7
778
Normal
0.7
218
Normal
0.7
286
Normal
0.7
484
Normal
0.7
912
Normal
0.7
515
Tumor
0.7
452
Normal
0.7
968
Normal
0.7
723
Tumor
0.6
162
Normal
0.6
742
Normal
0.6
714
Normal
0.6
882
Normal
0.6
746
Normal
0.6
862
Normal
0.6
944
Normal
0.6
695
Tumor
0.6
922
Normal
0.6
884
Normal
0.6
358
Normal
0.6
365
Tumor
0.6
298
Normal
0.6
196
Normal
0.6
392
Normal
0.6
518
Normal
0.6
864
Normal
0.6
866
Normal
0.6
448
Normal
0.6
568
Normal
0.6
924
Normal
0.6
468
Normal
0.6
1026
Normal
0.6
482
Normal
0.6
564
Normal
0.6
546
Normal
0.6
426
Normal
0.6
554
Normal
0.6
113
Tumor
0.6
534
Normal
0.6
114
Normal
0.6
642
Normal
0.6
686
Normal
0.6
332
Normal
0.5
1022
Normal
0.5
664
Normal
0.5
738
Normal
0.5
132
Normal
0.5
394
Normal
0.5
818
Normal
0.5
514
Normal
0.5
618
Normal
0.5
741
Tumor
0.5
212
Normal
0.5
228
Normal
0.5
938
Normal
0.5
964
Normal
0.5
878
Normal
0.5
138
Normal
0.5
424
Normal
0.5
128
Normal
0.5
867
Tumor
0.5
662
Normal
0.5
412
Normal
0.5
222
Normal
0.5
428
Normal
0.5
186
Normal
0.5
978
Normal
0.5
616
Normal
0.5
572
Normal
0.5
1028
Normal
0.5
1016
Normal
0.5
466
Normal
0.5
258
Normal
0.5
488
Normal
0.5
926
Normal
0.4
464
Normal
0.4
1046
Normal
0.4
436
Normal
0.4
716
Normal
0.4
342
Normal
0.4
1032
Normal
0.4
284
Normal
0.4
982
Normal
0.4
918
Normal
0.4
111
Normal
0.4
1014
Normal
0.4
952
Normal
0.4
368
Normal
0.4
414
Normal
0.4
954
Normal
0.4
396
Normal
0.4
574
Normal
0.4
666
Normal
0.4
816
Normal
0.4
728
Normal
0.4
1044
Normal
0.4
472
Normal
0.4
914
Normal
0.4
494
Normal
0.4
314
Normal
0.4
366
Normal
0.4
852
Normal
0.4
925
Tumor
0.4
328
Normal
0.4
262
Normal
0.4
352
Normal
0.4
628
Normal
0.4
362
Normal
0.4
1042
Normal
0.4
446
Normal
0.3
744
Normal
0.3
422
Normal
0.3
722
Normal
0.3
713
Tumor
0.3
388
Normal
0.3
214
Normal
0.3
984
Normal
0.3
557
Tumor
0.3
966
Normal
0.3
615
Tumor
0.3
976
Normal
0.3
474
Normal
0.3
432
Normal
0.3
516
Normal
0.3
874
Normal
0.3
124
Normal
0.3
232
Normal
0.3
1015
Tumor
0.3
278
Normal
0.3
142
Normal
0.3
344
Normal
0.3
136
Normal
0.3
1045
Tumor
0.3
1027
Tumor
0.3
312
Normal
0.3
272
Normal
0.3
354
Normal
0.3
481
Tumor
0.3
224
Normal
0.3
376
Normal
0.3
416
Normal
0.3
361
Tumor
0.3
423
Tumor
0.2
126
Normal
0.2
364
Normal
0.2
861
Tumor
0.2
571
Tumor
0.2
386
Normal
0.2
958
Normal
0.2
492
Normal
0.2
524
Normal
0.2
916
Normal
0.2
538
Normal
0.2
456
Normal
0.2
146
Normal
0.1
956
Normal
0.1
451
Tumor
0.1
567
Tumor
0.1
563
Tumor
0.1
755
Tumor
0.1
955
Tumor
0.1
195
Tumor
0.1
434
Normal
0.1
477
Tumor
0.1
188
Normal
0.1
672
Normal
0.1
261
Tumor
0.0
526
Normal
0.0
478
Normal
0.0
148
Normal
0.0
384
Normal
0.0
112
Tumor
0.0
217
Tumor
0.0
137
Tumor
0.0
721
Tumor
0.0
785
Tumor
0.0
635
Tumor
0.0
227
Tumor
0.0
857
Tumor
0.0
777
Tumor
0.0
127
Tumor
0.0
727
Tumor
0.0
461
Tumor
0.0
145
Tumor
-0.1
268
Normal
-0.1
257
Tumor
-0.1
231
Tumor
-0.1
937
Tumor
-0.1
745
Tumor
-0.1
444
Normal
-0.1
536
Normal
-0.1
267
Tumor
-0.1
327
Tumor
-0.1
617
Tumor
-0.1
823
Tumor
-0.1
883
Tumor
-0.2
863
Tumor
-0.2
421
Tumor
-0.2
353
Tumor
-0.2
953
Tumor
-0.2
171
Tumor
-0.2
433
Tumor
-0.2
498
Normal
-0.3
685
Tumor
-0.3
415
Tumor
-0.3
192
Normal
-0.3
431
Tumor
-0.3
743
Tumor
-0.3
341
Tumor
-0.3
387
Tumor
-0.3
191
Tumor
-0.3
483
Tumor
-0.3
187
Tumor
-0.4
873
Tumor
-0.4
357
Tumor
-0.4
851
Tumor
-0.4
213
Tumor
-0.5
447
Tumor
-0.5
1043
Tumor
-0.5
913
Tumor
-0.5
443
Tumor
-0.5
135
Tumor
-0.6
527
Tumor
-0.6
223
Tumor
-0.6
125
Tumor
-0.6
1025
Tumor
-0.6
663
Tumor
-0.6
185
Tumor
-0.6
141
Tumor
-0.6
445
Tumor
-0.6
355
Tumor
-0.6
517
Tumor
-0.6
533
Tumor
-0.6
814
Normal
-0.6
737
Tumor
-0.7
977
Tumor
-0.7
363
Tumor
-0.7
967
Tumor
-0.7
815
Tumor
-0.7
297
Tumor
-0.7
435
Tumor
-0.7
537
Tumor
-0.7
491
Tumor
-0.7
487
Tumor
-0.8
877
Tumor
-0.8
221
Tumor
-0.8
943
Tumor
-0.8
923
Tumor
-0.8
665
Tumor
-0.8
395
Tumor
-0.8
813
Tumor
-0.8
715
Tumor
-0.8
1021
Tumor
-0.8
271
Tumor
-0.8
147
Tumor
-0.8
161
Tumor
-0.9
455
Tumor
-0.9
881
Tumor
-0.9
553
Tumor
-0.9
724
Normal
-0.9
473
Tumor
-0.9
951
Tumor
-0.9
1013
Tumor
-0.9
697
Tumor
-0.9
391
Tumor
-0.9
921
Tumor
-0.9
393
Tumor
-1.0
1031
Tumor
-1.0
641
Tumor
-1.0
413
Tumor
-1.0
865
Tumor
-1.0
313
Tumor
-1.0
123
Tumor
-1.0
467
Tumor
-1.0
493
Tumor
-1.0
975
Tumor
-1.0
411
Tumor
-1.0
523
Tumor
-1.0
963
Tumor
-1.0
573
Tumor
-1.0
277
Tumor
-1.1
471
Tumor
-1.1
983
Tumor
-1.1
917
Tumor
-1.1
497
Tumor
-1.1
427
Tumor
-1.1
965
Tumor
-1.1
285
Tumor
-1.2
383
Tumor
-1.2
131
Tumor
-1.3
525
Tumor
-1.3
463
Tumor
-1.3
331
Tumor
-1.3
647
Tumor
-1.4
283
Tumor
-1.4
367
Tumor
-1.4
817
Tumor
-1.4
343
Tumor
-1.5
545
Tumor
-1.5
311
Tumor
-1.5
957
Tumor
-1.5
671
Tumor
-1.6
351
Tumor
-1.7
375
Tumor
-1.8
535
Tumor
-1.9
661
Tumor
-1.9
425
Tumor
-1.9
211
Tumor
-2.2
385
Tumor
-2.5
Show allShow less
LIVER CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.