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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
ADPGK is not prognostic in Liver Hepatocellular Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
3.5
Number of samples
362
Samples
Sample
Description
TPM
TCGA-CC-A7IJ-01A
0 years, male, asian, stage:Stage II, alive, 382 days
36.9
TCGA-CC-5260-01A
0 years, female, asian, stage:Stage IIIC, dead, 87 days
20.2
TCGA-BC-A8YO-01A
0 years, female, white, stage:Stage IIIC, alive, 562 days
17.6
TCGA-ZP-A9D2-01A
0 years, male, white, stage:'--, dead, 765 days
16.7
TCGA-CC-5263-01A
0 years, male, asian, stage:Stage IIIA, dead, 129 days
15.1
TCGA-ED-A5KG-01A
0 years, female, asian, stage:Stage II, alive, 854 days
11.8
TCGA-BC-A10W-01A
0 years, male, asian, stage:'--, dead, 91 days
11.8
TCGA-CC-A3M9-01A
0 years, male, asian, stage:Stage IIIA, dead, 300 days
11.3
TCGA-DD-A73E-01A
0 years, male, white, stage:Stage I, alive, 44 days
11.2
TCGA-DD-A1EH-01A
0 years, male, white, stage:Stage III, alive, 1495 days
11.1
TCGA-DD-A1EC-01A
0 years, female, white, stage:Stage I, alive, 602 days
11.0
TCGA-G3-A6UC-01A
0 years, male, white, stage:Stage IIIB, alive, 671 days
10.9
TCGA-DD-AADW-01A
0 years, male, asian, stage:Stage I, alive, 587 days
10.4
TCGA-CC-5264-01A
0 years, male, asian, stage:Stage IIIA, dead, 102 days
10.2
TCGA-DD-A114-01A
0 years, male, black or african american, stage:Stage II, dead, 1149 days
10.2
TCGA-CC-A1HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 101 days
9.6
TCGA-CC-5261-01A
0 years, male, asian, stage:Stage II, dead, 97 days
9.4
TCGA-GJ-A3OU-01A
0 years, male, white, stage:Stage I, alive, 879 days
9.3
TCGA-DD-AACA-01A
0 years, male, asian, stage:Stage I, alive, 2301 days
9.2
TCGA-ZP-A9D0-01A
0 years, female, black or african american, stage:'--, alive, 1091 days
8.9
TCGA-DD-AACZ-01A
0 years, female, asian, stage:Stage I, dead, 171 days
8.9
TCGA-DD-AAE2-01A
0 years, male, asian, stage:Stage I, alive, 638 days
8.9
TCGA-DD-A1EE-01A
0 years, male, white, stage:Stage IIIA, dead, 349 days
8.8
TCGA-UB-A7MC-01A
0 years, male, white, stage:Stage IIIA, alive, 500 days
8.7
TCGA-EP-A12J-01A
0 years, male, black or african american, stage:Stage I, alive, 570 days
8.5
TCGA-DD-A4NJ-01A
0 years, female, white, stage:Stage II, alive, 928 days
8.3
TCGA-DD-AACP-01A
0 years, male, asian, stage:Stage I, alive, 415 days
8.2
TCGA-ED-A7PX-01A
0 years, female, asian, stage:Stage II, alive, 6 days
8.2
TCGA-DD-A4NA-01A
0 years, female, white, stage:Stage IIIC, alive, 1008 days
8.1
TCGA-DD-AAEK-01A
0 years, male, asian, stage:Stage II, alive, 1067 days
8.1
TCGA-BC-A10Q-01A
0 years, female, white, stage:'--, dead, 1135 days
8.1
TCGA-G3-A7M6-01A
0 years, female, white, stage:Stage I, alive, 632 days
8.0
TCGA-5C-A9VG-01A
0 years, male, white, stage:Stage II, alive, 328 days
8.0
TCGA-ED-A97K-01A
0 years, male, asian, stage:Stage IIIA, alive, 6 days
7.8
TCGA-BW-A5NO-01A
0 years, male, black or african american, stage:Stage IIIA, alive, 20 days
7.7
TCGA-DD-AADY-01A
0 years, female, asian, stage:Stage I, alive, 555 days
7.6
TCGA-ED-A66X-01A
0 years, male, asian, stage:Stage IIIA, alive, 406 days
7.3
TCGA-BC-A3KG-01A
0 years, female, white, stage:Stage II, alive, 680 days
7.3
TCGA-DD-A1EA-01A
0 years, male, asian, stage:Stage II, alive, 2415 days
7.1
TCGA-DD-AAD0-01A
0 years, female, asian, stage:Stage I, alive, 137 days
6.9
TCGA-DD-AACS-01A
0 years, male, asian, stage:Stage I, alive, 1804 days
6.9
TCGA-DD-AADD-01A
0 years, male, asian, stage:Stage I, alive, 1231 days
6.8
TCGA-FV-A3I1-01A
0 years, female, white, stage:Stage II, dead, 247 days
6.8
TCGA-2Y-A9GX-01A
0 years, male, white, stage:Stage I, alive, 2442 days
6.6
TCGA-UB-A7MD-01A
0 years, male, black or african american, stage:Stage I, dead, 52 days
6.6
TCGA-DD-A113-01A
0 years, female, white, stage:Stage II, alive, 2425 days
6.5
TCGA-DD-A11C-01A
0 years, male, white, stage:Stage I, alive, 662 days
6.4
TCGA-DD-A1EJ-01A
0 years, female, white, stage:Stage IIIC, dead, 1005 days
6.3
TCGA-DD-A4NF-01A
0 years, male, white, stage:Stage I, alive, 942 days
6.3
TCGA-DD-A3A4-01A
0 years, male, white, stage:Stage IIIA, dead, 612 days
6.3
TCGA-UB-AA0U-01A
0 years, male, white, stage:Stage II, alive, 327 days
6.2
TCGA-CC-5258-01A
0 years, male, asian, stage:Stage II, dead, 129 days
6.2
TCGA-ZP-A9CZ-01A
0 years, male, asian, stage:'--, alive, 706 days
6.2
TCGA-DD-A1EB-01A
0 years, female, stage:Stage I, alive, 2017 days
6.2
TCGA-FV-A3R3-01A
0 years, female, white, stage:Stage I, dead, 366 days
6.1
TCGA-DD-A118-01A
0 years, female, white, stage:Stage II, alive, 3437 days
6.0
TCGA-DD-A4NE-01A
0 years, female, white, stage:Stage IIIA, dead, 660 days
5.9
TCGA-BC-A112-01A
0 years, male, white, stage:'--, dead, 153 days
5.9
TCGA-DD-AAD1-01A
0 years, female, asian, stage:Stage I, alive, 564 days
5.8
TCGA-G3-AAV7-01A
0 years, male, asian, stage:Stage II, alive, 361 days
5.7
TCGA-DD-AACN-01A
0 years, male, asian, stage:Stage I, alive, 1302 days
5.6
TCGA-G3-A25Y-01A
0 years, female, asian, stage:Stage I, dead, 452 days
5.6
TCGA-4R-AA8I-01A
0 years, male, white, stage:Stage II, dead, 262 days
5.6
TCGA-DD-A4NB-01A
0 years, male, white, stage:Stage I, alive, 989 days
5.6
TCGA-K7-A5RG-01A
0 years, male, black or african american, stage:Stage I, alive, 519 days
5.5
TCGA-XR-A8TC-01A
0 years, female, white, stage:Stage I, alive, 1339 days
5.4
TCGA-UB-A7MA-01A
0 years, female, white, stage:Stage II, alive, 848 days
5.4
TCGA-YA-A8S7-01A
0 years, male, white, stage:Stage IIIA, dead, 412 days
5.4
TCGA-ED-A66Y-01A
0 years, female, asian, stage:Stage IIIA, dead, 296 days
5.4
TCGA-XR-A8TE-01A
0 years, male, white, stage:Stage IIIA, alive, 925 days
5.3
TCGA-ZS-A9CF-01A
0 years, male, white, stage:Stage II, alive, 2412 days
5.3
TCGA-FV-A4ZQ-01A
0 years, male, white, stage:Stage I, alive, 12 days
5.2
TCGA-ZP-A9CV-01A
0 years, male, white, stage:'--, dead, 1088 days
5.2
TCGA-BC-A10R-01A
0 years, female, white, stage:'--, dead, 308 days
5.1
TCGA-BC-A10Y-01A
0 years, male, white, stage:'--, dead, 711 days
5.0
TCGA-CC-A3MB-01A
0 years, male, asian, stage:Stage IIIA, dead, 315 days
5.0
TCGA-EP-A3RK-01A
0 years, male, white, stage:Stage IIIA, alive, 363 days
5.0
TCGA-CC-A7IH-01A
0 years, male, asian, stage:Stage IIIA, alive, 365 days
5.0
TCGA-DD-AACX-01A
0 years, male, asian, stage:Stage II, alive, 170 days
5.0
TCGA-DD-A115-01A
0 years, male, white, stage:Stage IIIA, dead, 2542 days
4.9
TCGA-DD-A73C-01A
0 years, female, white, stage:Stage IIIA, alive, 701 days
4.9
TCGA-K7-AAU7-01A
0 years, male, white, stage:Stage II, alive, 359 days
4.9
TCGA-5R-AA1C-01A
0 years, male, white, stage:Stage II, alive, 520 days
4.9
TCGA-G3-AAV3-01A
0 years, female, white, stage:Stage II, alive, 412 days
4.9
TCGA-ED-A459-01A
0 years, male, asian, stage:Stage II, alive, 910 days
4.9
TCGA-DD-AACW-01A
0 years, male, asian, stage:Stage I, alive, 1424 days
4.8
TCGA-DD-A4NV-01A
0 years, male, white, stage:Stage IIIA, alive, 2398 days
4.8
TCGA-DD-A1EF-01A
0 years, female, white, stage:Stage I, dead, 394 days
4.8
TCGA-2Y-A9GS-01A
0 years, male, white, stage:'--, dead, 724 days
4.7
TCGA-DD-A39W-01A
0 years, female, white, stage:Stage III, dead, 827 days
4.7
TCGA-G3-A7M9-01A
0 years, male, white, stage:Stage IIIB, dead, 56 days
4.7
TCGA-CC-A5UD-01A
0 years, male, asian, stage:Stage IIIA, dead, 304 days
4.7
TCGA-ED-A82E-01A
0 years, female, asian, stage:Stage IIIA, alive, 408 days
4.6
TCGA-DD-AAW0-01A
0 years, male, asian, stage:Stage I, alive, 2015 days
4.6
TCGA-DD-AADV-01A
0 years, male, asian, stage:Stage I, alive, 574 days
4.6
TCGA-BC-A10Z-01A
0 years, female, white, stage:Stage I, dead, 34 days
4.6
TCGA-T1-A6J8-01A
0 years, male, white, stage:'--, alive, 23 days
4.5
TCGA-2Y-A9HB-01A
0 years, male, stage:Stage I, alive, 260 days
4.5
TCGA-HP-A5N0-01A
0 years, female, stage:'--, dead, 752 days
4.5
TCGA-DD-AAW1-01A
0 years, male, asian, stage:Stage IIIA, alive, 1989 days
4.5
TCGA-DD-A11B-01A
0 years, male, white, stage:Stage I, dead, 14 days
4.5
TCGA-DD-A11D-01A
0 years, female, white, stage:Stage I, dead, 1560 days
4.5
TCGA-DD-AACV-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
4.5
TCGA-QA-A7B7-01A
0 years, male, black or african american, stage:Stage II, alive, 94 days
4.5
TCGA-ED-A627-01A
0 years, male, white, stage:Stage I, alive, 423 days
4.4
TCGA-DD-AACH-01A
0 years, male, asian, stage:Stage II, dead, 195 days
4.4
TCGA-FV-A23B-01A
0 years, female, white, stage:Stage II, dead, 1852 days
4.4
TCGA-BC-A3KF-01A
0 years, female, white, stage:Stage I, alive, 8 days
4.3
TCGA-FV-A3R2-01A
0 years, male, white, stage:Stage I, dead, 194 days
4.3
TCGA-G3-A3CK-01A
0 years, male, asian, stage:Stage I, alive, 585 days
4.3
TCGA-5R-AA1D-01A
0 years, female, white, stage:Stage IIIA, alive, 449 days
4.3
TCGA-2Y-A9H0-01A
0 years, male, white, stage:Stage IIIA, alive, 3675 days
4.3
TCGA-ED-A8O5-01A
0 years, female, asian, stage:Stage IIIA, alive, 406 days
4.3
TCGA-DD-AACK-01A
0 years, male, asian, stage:Stage I, alive, 9 days
4.2
TCGA-DD-AAE9-01A
0 years, male, asian, stage:Stage I, alive, 722 days
4.2
TCGA-DD-A4NR-01A
0 years, female, white, stage:Stage I, dead, 9 days
4.2
TCGA-DD-AAD3-01A
0 years, male, asian, stage:Stage I, alive, 1295 days
4.2
TCGA-DD-AAVY-01A
0 years, male, asian, stage:Stage IIIA, alive, 1970 days
4.2
TCGA-ZP-A9D4-01A
0 years, female, white, stage:'--, alive, 395 days
4.1
TCGA-UB-A7MB-01A
0 years, male, white, stage:Stage II, alive, 601 days
4.1
TCGA-XR-A8TG-01A
0 years, male, white, stage:Stage I, alive, 898 days
4.1
TCGA-G3-AAV1-01A
0 years, male, asian, stage:Stage IIIC, dead, 359 days
4.0
TCGA-ZP-A9CY-01A
0 years, female, white, stage:'--, alive, 782 days
4.0
TCGA-CC-A7IK-01A
0 years, male, asian, stage:Stage IIIA, dead, 262 days
3.9
TCGA-2Y-A9H2-01A
0 years, female, white, stage:Stage I, alive, 1731 days
3.9
TCGA-DD-AADB-01A
0 years, male, asian, stage:Stage I, alive, 1242 days
3.9
TCGA-DD-A4NS-01A
0 years, female, white, stage:Stage I, dead, 2456 days
3.9
TCGA-DD-AAVS-01A
0 years, male, asian, stage:Stage I, alive, 1823 days
3.9
TCGA-EP-A26S-01A
0 years, male, white, stage:Stage I, alive, 608 days
3.9
TCGA-FV-A3I0-01A
0 years, female, white, stage:Stage II, alive, 848 days
3.8
TCGA-CC-A5UE-01A
0 years, male, asian, stage:Stage IIIB, dead, 272 days
3.8
TCGA-UB-A7ME-01A
0 years, male, asian, stage:Stage I, alive, 486 days
3.7
TCGA-RC-A6M6-01A
0 years, male, white, stage:Stage II, alive, 9 days
3.7
TCGA-CC-A3MA-01A
0 years, male, asian, stage:Stage IIIA, dead, 303 days
3.7
TCGA-FV-A2QR-01A
0 years, male, white, stage:Stage I, dead, 581 days
3.7
TCGA-DD-AACU-01A
0 years, male, asian, stage:Stage I, alive, 1567 days
3.7
TCGA-DD-A4NN-01A
0 years, female, white, stage:Stage I, dead, 899 days
3.7
TCGA-2Y-A9GT-01A
0 years, male, white, stage:Stage I, dead, 1624 days
3.7
TCGA-DD-AAC8-01A
0 years, male, asian, stage:Stage I, dead, 16 days
3.6
TCGA-DD-AADP-01A
0 years, male, asian, stage:Stage I, alive, 458 days
3.6
TCGA-ED-A4XI-01A
0 years, male, asian, stage:Stage II, alive, 819 days
3.6
TCGA-BC-A10U-01A
0 years, male, white, stage:'--, dead, 837 days
3.6
TCGA-BC-A10T-01A
0 years, male, white, stage:'--, dead, 837 days
3.6
TCGA-RC-A7SK-01A
0 years, male, asian, stage:Stage I, alive, 472 days
3.5
TCGA-DD-A4NG-01A
0 years, male, white, stage:Stage IIIA, dead, 802 days
3.5
TCGA-DD-A4NO-01A
0 years, male, white, stage:Stage I, alive, 2245 days
3.5
TCGA-LG-A6GG-01A
0 years, female, white, stage:Stage II, alive, 387 days
3.5
TCGA-LG-A9QC-01A
0 years, male, white, stage:Stage I, alive, 425 days
3.4
TCGA-DD-AADL-01A
0 years, male, asian, stage:Stage I, alive, 636 days
3.4
TCGA-BC-A10X-01A
0 years, female, white, stage:Stage IIIA, dead, 770 days
3.4
TCGA-DD-A4NH-01A
0 years, female, white, stage:Stage IIIB, alive, 917 days
3.4
TCGA-DD-A73F-01A
0 years, female, white, stage:Stage I, alive, 1085 days
3.4
TCGA-ED-A7XP-01A
0 years, female, asian, stage:Stage II, alive, 400 days
3.4
TCGA-DD-AADC-01A
0 years, male, asian, stage:Stage I, dead, 425 days
3.4
TCGA-2Y-A9H9-01A
0 years, male, white, stage:Stage I, alive, 697 days
3.4
TCGA-CC-A9FW-01A
0 years, male, asian, stage:Stage IIIA, alive, 248 days
3.3
TCGA-XR-A8TD-01A
0 years, female, white, stage:Stage IIIB, alive, 1030 days
3.3
TCGA-G3-AAV4-01A
0 years, female, white, stage:Stage I, dead, 27 days
3.3
TCGA-WX-AA44-01A
0 years, female, white, stage:Stage I, alive, 615 days
3.3
TCGA-ZP-A9D1-01A
0 years, female, white, stage:'--, alive, 21 days
3.3
TCGA-2Y-A9GZ-01A
0 years, female, white, stage:Stage II, dead, 848 days
3.3
TCGA-2Y-A9GU-01A
0 years, female, white, stage:Stage I, alive, 1939 days
3.2
TCGA-KR-A7K8-01A
0 years, male, stage:Stage I, alive, 906 days
3.2
TCGA-5R-AAAM-01A
0 years, female, white, stage:Stage II, dead, 46 days
3.2
TCGA-DD-AAVZ-01A
0 years, male, asian, stage:Stage I, alive, 1900 days
3.1
TCGA-WX-AA46-01A
0 years, male, white, stage:Stage II, alive, 756 days
3.1
TCGA-EP-A2KA-01A
0 years, female, white, stage:Stage IIIA, dead, 627 days
3.1
TCGA-UB-A7MF-01A
0 years, male, white, stage:Stage IIIA, dead, 214 days
3.1
TCGA-G3-A3CH-01A
0 years, male, asian, stage:Stage IIIA, alive, 780 days
3.1
TCGA-DD-A73B-01A
0 years, female, white, stage:Stage I, dead, 283 days
3.1
TCGA-DD-A4NK-01A
0 years, female, white, stage:Stage IIIA, dead, 1210 days
3.1
TCGA-DD-AAEI-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
3.1
TCGA-MI-A75I-01A
0 years, male, black or african american, stage:'--, alive, 630 days
3.0
TCGA-2Y-A9H7-01A
0 years, female, white, stage:Stage I, alive, 1168 days
3.0
TCGA-DD-AAE7-01A
0 years, male, asian, stage:Stage I, alive, 644 days
3.0
TCGA-K7-A5RF-01A
0 years, male, white, stage:Stage I, alive, 631 days
3.0
TCGA-RC-A6M5-01A
0 years, female, white, stage:Stage IVA, alive, 15 days
3.0
TCGA-DD-AAEG-01A
0 years, female, asian, stage:Stage I, alive, 719 days
2.9
TCGA-CC-5262-01A
0 years, male, asian, stage:Stage IIIC, dead, 103 days
2.9
TCGA-DD-A1EL-01A
0 years, male, black or african american, stage:Stage II, dead, 415 days
2.9
TCGA-DD-A1ED-01A
0 years, male, white, stage:Stage I, alive, 2301 days
2.9
TCGA-UB-AA0V-01A
0 years, female, white, stage:Stage I, alive, 314 days
2.8
TCGA-ED-A7XO-01A
0 years, male, asian, stage:Stage IIIA, alive, 427 days
2.8
TCGA-DD-A73D-01A
0 years, female, white, stage:Stage II, alive, 693 days
2.8
TCGA-2Y-A9GV-01A
0 years, female, white, stage:Stage I, dead, 2532 days
2.8
TCGA-G3-AAV2-01A
0 years, male, white, stage:Stage I, alive, 372 days
2.8
TCGA-PD-A5DF-01A
0 years, female, white, stage:Stage IIIB, dead, 639 days
2.7
TCGA-DD-AAVP-01A
0 years, male, asian, stage:Stage I, alive, 2752 days
2.7
TCGA-DD-A1EK-01A
0 years, female, white, stage:Stage IVB, dead, 558 days
2.7
TCGA-KR-A7K0-01A
0 years, male, white, stage:Stage I, dead, 65 days
2.7
TCGA-MI-A75G-01A
0 years, male, white, stage:Stage II, alive, 698 days
2.7
TCGA-2Y-A9HA-01A
0 years, male, white, stage:Stage II, dead, 36 days
2.7
TCGA-DD-AAW2-01A
0 years, male, asian, stage:Stage I, alive, 1855 days
2.7
TCGA-DD-AAVV-01A
0 years, male, asian, stage:Stage II, alive, 2455 days
2.6
TCGA-DD-AAD2-01A
0 years, male, asian, stage:Stage I, alive, 658 days
2.6
TCGA-GJ-A9DB-01A
0 years, male, white, stage:Stage I, dead, 67 days
2.6
TCGA-CC-A8HU-01A
0 years, female, asian, stage:Stage IIIA, dead, 344 days
2.6
TCGA-G3-A3CG-01A
0 years, male, white, stage:Stage I, alive, 673 days
2.6
TCGA-BC-A10S-01A
0 years, male, white, stage:'--, dead, 1423 days
2.6
TCGA-G3-A25V-01A
0 years, male, white, stage:Stage I, alive, 860 days
2.6
TCGA-DD-AAW3-01A
0 years, male, asian, stage:Stage I, alive, 1633 days
2.6
TCGA-DD-AADG-01A
0 years, male, asian, stage:Stage IIIA, alive, 1145 days
2.6
TCGA-BD-A3EP-01A
0 years, female, black or african american, stage:Stage I, alive, 409 days
2.5
TCGA-3K-AAZ8-01A
0 years, male, black or african american, stage:Stage IIIB, alive, 396 days
2.5
TCGA-DD-AAD6-01A
0 years, male, asian, stage:Stage IIIA, alive, 672 days
2.5
TCGA-DD-AADU-01A
0 years, male, asian, stage:Stage II, alive, 554 days
2.5
TCGA-2Y-A9H5-01A
0 years, female, white, stage:Stage I, dead, 555 days
2.4
TCGA-GJ-A6C0-01A
0 years, female, white, stage:Stage II, dead, 31 days
2.4
TCGA-DD-A1EG-01A
0 years, male, white, stage:Stage I, dead, 1372 days
2.4
TCGA-DD-AAEE-01A
0 years, male, asian, stage:Stage I, alive, 810 days
2.4
TCGA-DD-AACY-01A
0 years, male, asian, stage:Stage I, alive, 1450 days
2.4
TCGA-NI-A8LF-01A
0 years, male, white, stage:Stage I, alive, 799 days
2.4
TCGA-DD-AAVX-01A
0 years, male, asian, stage:Stage II, alive, 1718 days
2.4
TCGA-CC-A9FS-01A
0 years, male, asian, stage:Stage II, alive, 211 days
2.4
TCGA-G3-A5SM-01A
0 years, male, white, stage:Stage II, alive, 520 days
2.4
TCGA-DD-AA3A-01A
0 years, female, white, stage:Stage I, dead, 410 days
2.3
TCGA-G3-A5SI-01A
0 years, male, asian, stage:Stage II, dead, 768 days
2.3
TCGA-O8-A75V-01A
0 years, male, stage:Stage I, alive, 538 days
2.3
TCGA-DD-A1EI-01A
0 years, male, asian, stage:Stage I, alive, 183 days
2.3
TCGA-G3-A7M8-01A
0 years, male, asian, stage:Stage I, alive, 430 days
2.3
TCGA-CC-A5UC-01A
0 years, male, asian, stage:Stage IIIA, dead, 347 days
2.2
TCGA-2Y-A9H6-01A
0 years, female, white, stage:Stage I, alive, 357 days
2.2
TCGA-DD-A4ND-01A
0 years, female, white, stage:Stage I, alive, 2746 days
2.2
TCGA-RG-A7D4-01A
0 years, male, black or african american, stage:Stage II, alive, 1098 days
2.2
TCGA-DD-AACE-01A
0 years, male, asian, stage:Stage I, alive, 2184 days
2.2
TCGA-G3-A5SJ-01A
0 years, male, white, stage:Stage I, alive, 698 days
2.2
TCGA-RC-A6M4-01A
0 years, female, white, stage:Stage IIIA, alive, 22 days
2.2
TCGA-BC-A217-01A
0 years, female, white, stage:Stage II, dead, 1397 days
2.2
TCGA-CC-A7IE-01A
0 years, male, asian, stage:Stage IIIA, dead, 217 days
2.2
TCGA-DD-AAD5-01A
0 years, male, asian, stage:Stage I, alive, 1345 days
2.2
TCGA-MI-A75E-01A
0 years, male, white, stage:Stage IIIC, alive, 507 days
2.2
TCGA-CC-A3MC-01A
0 years, male, asian, stage:Stage IIIA, alive, 363 days
2.1
TCGA-WJ-A86L-01A
0 years, female, white, stage:Stage I, alive, 345 days
2.1
TCGA-DD-A4NI-01A
0 years, male, white, stage:Stage II, alive, 816 days
2.1
TCGA-XR-A8TF-01A
0 years, male, white, stage:Stage I, dead, 693 days
2.1
TCGA-BD-A3ER-01A
0 years, male, white, stage:Stage II, alive, 1115 days
2.1
TCGA-DD-A3A8-01A
0 years, male, white, stage:Stage II, dead, 11 days
2.1
TCGA-DD-AACF-01A
0 years, male, asian, stage:Stage I, dead, 365 days
2.0
TCGA-2Y-A9H8-01A
0 years, female, white, stage:'--, dead, 633 days
2.0
TCGA-CC-A7IL-01A
0 years, male, asian, stage:Stage IIIA, dead, 278 days
1.9
TCGA-CC-A7II-01A
0 years, male, asian, stage:Stage IIIA, alive, 399 days
1.8
TCGA-EP-A2KB-01A
0 years, female, white, stage:Stage I, dead, 596 days
1.8
TCGA-DD-AACL-01A
0 years, female, asian, stage:Stage I, dead, 107 days
1.8
TCGA-2Y-A9H4-01A
0 years, male, black or african american, stage:Stage I, alive, 1452 days
1.8
TCGA-DD-A4NL-01A
0 years, male, white, stage:Stage I, alive, 1711 days
1.8
TCGA-DD-AACB-01A
0 years, female, asian, stage:Stage I, alive, 2324 days
1.7
TCGA-FV-A2QQ-01A
0 years, male, white, stage:Stage I, alive, 729 days
1.7
TCGA-2Y-A9GY-01A
0 years, female, white, stage:Stage II, dead, 757 days
1.7
TCGA-DD-AACT-01A
0 years, female, asian, stage:Stage I, alive, 1562 days
1.7
TCGA-ZS-A9CD-01A
0 years, male, white, stage:Stage II, dead, 1386 days
1.7
TCGA-DD-A3A5-01A
0 years, female, white, stage:Stage III, dead, 3125 days
1.6
TCGA-DD-A4NQ-01A
0 years, male, white, stage:Stage II, dead, 373 days
1.6
TCGA-BC-A216-01A
0 years, female, white, stage:Stage IIIA, alive, 1351 days
1.6
TCGA-DD-AACC-01A
0 years, male, asian, stage:Stage I, dead, 1685 days
1.6
TCGA-DD-AAVR-01A
0 years, male, asian, stage:Stage I, alive, 2513 days
1.6
TCGA-BC-A69I-01A
0 years, male, white, stage:Stage I, alive, 387 days
1.5
TCGA-G3-A5SK-01A
0 years, male, white, stage:Stage I, alive, 744 days
1.5
TCGA-EP-A2KC-01A
0 years, male, black or african american, stage:Stage I, dead, 19 days
1.5
TCGA-HP-A5MZ-01A
0 years, male, stage:Stage I, dead, 91 days
1.5
TCGA-DD-AAVW-01A
0 years, male, asian, stage:Stage I, alive, 2317 days
1.5
TCGA-ZS-A9CE-01A
0 years, female, white, stage:Stage II, alive, 1241 days
1.5
TCGA-5C-AAPD-01A
0 years, male, asian, stage:Stage II, alive, 20 days
1.5
TCGA-BC-A110-01A
0 years, female, black or african american, stage:'--, dead, 2116 days
1.5
TCGA-DD-A73A-01A
0 years, male, white, stage:Stage I, alive, 728 days
1.5
TCGA-DD-AACQ-01A
0 years, male, asian, stage:Stage II, dead, 432 days
1.4
TCGA-CC-A8HS-01A
0 years, male, asian, stage:Stage IIIC, dead, 300 days
1.4
TCGA-ED-A8O6-01A
0 years, female, asian, stage:Stage IIIA, dead, 56 days
1.4
TCGA-G3-A25U-01A
0 years, female, asian, stage:Stage I, alive, 1636 days
1.4
TCGA-MR-A8JO-01A
0 years, male, white, stage:Stage I, alive, 330 days
1.4
TCGA-MR-A520-01A
0 years, male, white, stage:Stage I, alive, 229 days
1.4
TCGA-DD-AAVQ-01A
0 years, male, asian, stage:Stage I, alive, 2728 days
1.4
TCGA-5C-A9VH-01A
0 years, male, white, stage:Stage I, alive, 322 days
1.4
TCGA-G3-A7M7-01A
0 years, male, white, stage:Stage I, alive, 361 days
1.4
TCGA-ZS-A9CG-01A
0 years, male, white, stage:Stage II, alive, 341 days
1.3
TCGA-EP-A3JL-01A
0 years, male, white, stage:Stage I, alive, 303 days
1.3
TCGA-DD-AAEH-01A
0 years, male, asian, stage:Stage I, alive, 784 days
1.3
TCGA-G3-AAV5-01A
0 years, male, white, stage:Stage II, alive, 354 days
1.3
TCGA-DD-AAE6-01A
0 years, female, asian, stage:Stage I, alive, 141 days
1.3
TCGA-DD-AADR-01A
0 years, male, asian, stage:Stage I, alive, 2028 days
1.3
TCGA-G3-A7M5-01A
0 years, male, asian, stage:Stage I, alive, 447 days
1.2
TCGA-RC-A7SF-01A
0 years, male, asian, stage:Stage I, alive, 579 days
1.2
TCGA-G3-A5SL-01A
0 years, male, white, stage:Stage II, alive, 621 days
1.2
TCGA-FV-A496-01A
0 years, female, white, stage:Stage I, alive, 10 days
1.2
TCGA-LG-A9QD-01A
0 years, male, white, stage:Stage IIIA, alive, 366 days
1.2
TCGA-G3-A25T-01A
0 years, female, white, stage:Stage IIIA, alive, 1553 days
1.1
TCGA-G3-A3CI-01A
0 years, male, white, stage:Stage I, alive, 180 days
1.1
TCGA-CC-A7IF-01A
0 years, male, asian, stage:Stage IIIA, dead, 649 days
1.1
TCGA-DD-AADA-01A
0 years, female, asian, stage:Stage I, alive, 1233 days
1.1
TCGA-CC-A8HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 140 days
1.1
TCGA-DD-AAE1-01A
0 years, male, asian, stage:Stage I, alive, 552 days
1.0
TCGA-DD-AAE0-01A
0 years, female, asian, stage:Stage IIIA, alive, 555 days
1.0
TCGA-2Y-A9GW-01A
0 years, male, white, stage:Stage I, dead, 1271 days
1.0
TCGA-MI-A75C-01A
0 years, male, white, stage:Stage I, alive, 291 days
1.0
TCGA-DD-AAD8-01A
0 years, female, asian, stage:Stage I, alive, 1219 days
1.0
TCGA-K7-A6G5-01A
0 years, male, white, stage:Stage I, alive, 512 days
0.9
TCGA-G3-AAV6-01A
0 years, female, white, stage:Stage IIIA, dead, 65 days
0.9
TCGA-G3-A25Z-01A
0 years, male, asian, stage:Stage I, alive, 655 days
0.9
TCGA-CC-A8HV-01A
0 years, female, asian, stage:Stage II, dead, 279 days
0.9
TCGA-DD-A39Y-01A
0 years, male, asian, stage:Stage I, dead, 171 days
0.9
TCGA-DD-AAE3-01A
0 years, male, asian, stage:Stage I, alive, 566 days
0.8
TCGA-RC-A7SB-01A
0 years, male, asian, stage:Stage II, alive, 588 days
0.8
TCGA-DD-A116-01A
0 years, male, asian, stage:Stage IIIA, dead, 1622 days
0.8
TCGA-DD-A4NP-01A
0 years, male, white, stage:Stage I, alive, 3308 days
0.7
TCGA-DD-AADK-01A
0 years, female, asian, stage:Stage II, alive, 1049 days
0.7
TCGA-DD-A3A2-01A
0 years, female, white, stage:Stage I, dead, 2131 days
0.7
TCGA-DD-AAC9-01A
0 years, male, asian, stage:Stage I, alive, 347 days
0.7
TCGA-DD-AADJ-01A
0 years, female, asian, stage:Stage I, alive, 1066 days
0.7
TCGA-DD-AAEA-01A
0 years, male, asian, stage:Stage I, alive, 575 days
0.7
TCGA-G3-A25X-01A
0 years, male, asian, stage:Stage II, alive, 1779 days
0.7
TCGA-RC-A7SH-01A
0 years, male, asian, stage:Stage II, alive, 468 days
0.7
TCGA-DD-A39X-01A
0 years, female, white, stage:Stage I, dead, 1694 days
0.7
TCGA-NI-A4U2-01A
0 years, male, white, stage:Stage IIIA, dead, 1791 days
0.6
TCGA-DD-A3A3-01A
0 years, male, asian, stage:Stage I, dead, 535 days
0.6
TCGA-DD-AAED-01A
0 years, male, asian, stage:Stage I, alive, 763 days
0.6
TCGA-ED-A7PZ-01A
0 years, male, asian, stage:Stage II, alive, 6 days
0.6
TCGA-ED-A7PY-01A
0 years, female, asian, stage:Stage II, alive, 390 days
0.6
TCGA-CC-A7IG-01A
0 years, male, asian, stage:Stage II, dead, 299 days
0.6
TCGA-DD-A3A9-01A
0 years, female, white, stage:Stage IVB, dead, 931 days
0.6
TCGA-KR-A7K7-01A
0 years, female, white, stage:Stage II, alive, 951 days
0.5
TCGA-RC-A7S9-01A
0 years, female, asian, stage:Stage I, alive, 640 days
0.5
TCGA-BD-A2L6-01A
0 years, male, white, stage:'--, alive, 1363 days
0.5
TCGA-DD-A3A1-01A
0 years, male, stage:Stage IIIA, dead, 233 days
0.4
TCGA-MI-A75H-01A
0 years, male, white, stage:'--, alive, 747 days
0.4
TCGA-DD-AACJ-01A
0 years, male, asian, stage:Stage II, alive, 2102 days
0.4
TCGA-DD-AADM-01A
0 years, male, asian, stage:Stage II, dead, 12 days
0.4
TCGA-KR-A7K2-01A
0 years, male, white, stage:Stage I, alive, 829 days
0.4
TCGA-ES-A2HT-01A
0 years, male, black or african american, stage:Stage I, dead, 438 days
0.4
TCGA-G3-AAUZ-01A
0 years, male, stage:Stage I, alive, 480 days
0.4
TCGA-DD-AADQ-01A
0 years, male, asian, stage:Stage II, alive, 436 days
0.4
TCGA-BC-A69H-01A
0 years, male, white, stage:Stage II, alive, 444 days
0.3
TCGA-BC-A5W4-01A
0 years, male, white, stage:Stage IIIA, dead, 547 days
0.3
TCGA-G3-A25S-01A
0 years, male, white, stage:Stage I, dead, 416 days
0.3
TCGA-G3-AAV0-01A
0 years, male, asian, stage:Stage I, alive, 476 days
0.3
TCGA-DD-A39V-01A
0 years, male, white, stage:Stage II, dead, 643 days
0.2
TCGA-DD-AADI-01A
0 years, female, asian, stage:Stage I, alive, 1085 days
0.2
TCGA-WX-AA47-01A
0 years, female, white, stage:Stage IIIA, dead, 556 days
0.2
TCGA-DD-AADO-01A
0 years, male, asian, stage:Stage I, alive, 453 days
0.2
TCGA-DD-AAVU-01A
0 years, male, asian, stage:Stage II, alive, 2202 days
0.2
TCGA-DD-A39Z-01A
0 years, female, stage:Stage II, dead, 601 days
0.1
TCGA-G3-A3CJ-01A
0 years, male, american indian or alaska native, stage:Stage II, alive, 594 days
0.1
TCGA-DD-AADS-01A
0 years, male, asian, stage:Stage I, alive, 474 days
0.1
TCGA-DD-A119-01A
0 years, male, asian, stage:Stage IV, dead, 223 days
0.1
TCGA-DD-AAE4-01A
0 years, female, asian, stage:Stage I, alive, 608 days
0.1
TCGA-DD-A73G-01A
0 years, female, white, stage:Stage I, alive, 3478 days
0.1
TCGA-FV-A495-01A
0 years, female, white, stage:Stage II, alive, 1 days
0.1
TCGA-WQ-AB4B-01A
0 years, male, white, stage:Stage II, alive, 395 days
0.0
TCGA-FV-A4ZP-01A
0 years, male, white, stage:Stage IIIA, dead, 2486 days
0.0
TCGA-2Y-A9H3-01A
0 years, male, white, stage:Stage II, alive, 1516 days
0.0
TCGA-DD-AADF-01A
0 years, female, asian, stage:Stage I, dead, 115 days
0.0
TCGA-WQ-A9G7-01A
0 years, female, white, stage:'--, alive, 30 days
0.0
TCGA-DD-AACO-01A
0 years, male, asian, stage:Stage I, alive, 1876 days
0.0
TCGA-DD-AACI-01A
0 years, male, asian, stage:Stage II, alive, 1618 days
0.0
TCGA-CC-5259-01A
0 years, female, asian, stage:Stage IIIC, alive, 250 days
0.0
TCGA-CC-A123-01A
0 years, female, asian, stage:Stage IIIA, alive, 219 days
0.0
TCGA-DD-A3A7-01A
0 years, male, stage:Stage IIIB, dead, 419 days
0.0
TCGA-2Y-A9H1-01A
0 years, male, white, stage:Stage I, dead, 1229 days
0.0
TCGA-DD-AACG-01A
0 years, male, asian, stage:Stage II, dead, 469 days
0.0
TCGA-DD-A3A6-01A
0 years, female, white, stage:Stage II, dead, 3258 days
0.0
TCGA-DD-AAEB-01A
0 years, male, asian, stage:Stage I, alive, 478 days
0.0
TCGA-DD-AADN-01A
0 years, male, asian, stage:Stage I, alive, 898 days
0.0
TCGA-ES-A2HS-01A
0 years, male, white, stage:Stage I, dead, 688 days
0.0
TCGA-DD-AACD-01A
0 years, male, asian, stage:Stage I, dead, 381 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
ADPGK is not prognostic in Liver Hepatocellular Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
23.4
Number of samples
231
Samples
Sample
Description
TPM
DO23547
0 years, male, NA, stage:1, alive, 1020 days
124.8
DO45277
0 years, male, NA, stage:3, alive, 600 days
78.9
DO50815
0 years, male, NA, stage:3, alive, 150 days
64.1
DO50845
0 years, male, NA, stage:3, alive, 210 days
62.6
DO23523
0 years, male, NA, stage:3, alive, 1080 days
59.1
DO45287
0 years, male, NA, stage:1, alive, 390 days
55.4
DO23546
0 years, male, NA, stage:2, alive, 1050 days
53.8
DO23548
0 years, female, NA, stage:1, alive, 840 days
51.6
DO45297
0 years, female, NA, stage:4, dead, 1260 days
51.6
DO23549
0 years, male, NA, stage:3, alive, 990 days
50.8
DO45301
0 years, male, NA, stage:2, dead, 1440 days
50.3
DO45185
0 years, male, NA, stage:2, alive, 600 days
49.9
DO45105
0 years, male, NA, stage:1, alive, 1680 days
48.3
DO45307
0 years, female, NA, stage:4, dead, 240 days
48.2
DO45127
0 years, male, NA, stage:3, dead, 420 days
46.2
DO50816
0 years, male, NA, stage:2, alive, 390 days
45.6
DO50855
0 years, male, NA, stage:2, alive, 570 days
44.2
DO45145
0 years, male, NA, stage:3, dead, 60 days
43.9
DO45273
0 years, male, NA, stage:2, alive, 480 days
42.5
DO45275
0 years, male, NA, stage:3, dead, 10 days
40.8
DO23532
0 years, female, NA, stage:1, alive, 960 days
39.8
DO45249
0 years, male, NA, stage:1, alive, 630 days
39.7
DO45305
0 years, male, NA, stage:4, alive, 300 days
39.4
DO23526
0 years, male, NA, stage:3, alive, 1050 days
39.4
DO48720
0 years, female, NA, stage:2, alive, 570 days
39.2
DO45155
0 years, male, NA, stage:2, alive, 2160 days
38.3
DO45141
0 years, male, NA, stage:2, alive, 1320 days
38.1
DO45299
0 years, female, NA, stage:1, alive, 1440 days
37.7
DO50778
0 years, male, NA, stage:4, alive, 630 days
37.5
DO23513
0 years, male, NA, stage:3, alive, 1200 days
37.0
DO50817
0 years, male, NA, stage:2, alive, 390 days
35.0
DO45125
0 years, male, NA, stage:3, alive, 1680 days
33.6
DO45251
0 years, female, NA, stage:2, alive, 900 days
32.9
DO23539
0 years, male, NA, stage:1, alive, 1110 days
32.7
DO45217
0 years, female, NA, stage:3, dead, 270 days
32.5
DO23535
0 years, male, NA, stage:1, alive, 960 days
32.2
DO45139
0 years, male, NA, stage:3, alive, 1320 days
32.0
DO23534
0 years, male, NA, stage:2, alive, 840 days
31.9
DO45241
0 years, male, NA, stage:1, alive, 1080 days
31.7
DO23543
0 years, male, NA, stage:2, alive, 1020 days
31.0
DO23530
0 years, male, NA, stage:4, dead, 180 days
30.7
DO45211
0 years, male, NA, stage:3, alive, 240 days
30.5
DO48728
0 years, female, NA, stage:2, alive, 150 days
30.5
DO45167
0 years, male, NA, stage:2, dead, 1440 days
30.4
DO48730
0 years, female, NA, stage:2, alive, 630 days
30.1
DO48732
0 years, male, NA, stage:3, alive, 630 days
29.9
DO50813
0 years, male, NA, stage:2, alive, 420 days
29.8
DO45107
0 years, female, NA, stage:2, alive, 1710 days
29.1
DO48697
0 years, female, NA, stage:2, dead, 810 days
29.0
DO45103
0 years, male, NA, stage:3, alive, 450 days
28.9
DO45283
0 years, male, NA, stage:3, alive, 510 days
28.6
DO45263
0 years, male, NA, stage:3, dead, 270 days
28.3
DO45285
0 years, male, NA, stage:3, alive, 480 days
28.1
DO45289
0 years, female, NA, stage:3, alive, 360 days
27.9
DO48746
0 years, male, NA, stage:3, alive, 570 days
27.8
DO23514
0 years, male, NA, stage:2, alive, 1290 days
27.7
DO45265
0 years, male, NA, stage:3, alive, 1020 days
27.6
DO45303
0 years, female, NA, stage:3, alive, 990 days
27.6
DO23540
0 years, male, NA, stage:1, alive, 750 days
27.3
DO45279
0 years, male, NA, stage:3, alive, 1290 days
27.3
DO23512
0 years, male, NA, stage:1, alive, 1260 days
26.6
DO45101
0 years, male, NA, stage:2, alive, 1680 days
26.5
DO45215
0 years, male, NA, stage:2, alive, 1170 days
26.1
DO23516
0 years, male, NA, stage:3, dead, 20 days
26.1
DO23515
0 years, male, NA, stage:2, alive, 1230 days
25.9
DO45245
0 years, female, NA, stage:2, dead, 240 days
25.9
DO50791
0 years, female, NA, stage:1, dead, 480 days
25.5
DO50800
0 years, male, NA, stage:2, alive, 510 days
25.4
DO45205
0 years, female, NA, stage:2, dead, 90 days
25.3
DO48700
0 years, female, NA, stage:2, alive, 810 days
25.2
DO23519
0 years, male, NA, stage:3, alive, 630 days
25.1
DO23509
0 years, male, NA, stage:3, dead, 780 days
24.9
DO48682
0 years, female, NA, stage:3, dead, 120 days
24.9
DO45149
0 years, female, NA, stage:2, alive, 1260 days
24.8
DO45267
0 years, male, NA, stage:3, dead, 570 days
24.7
DO50819
0 years, female, NA, stage:2, alive, 510 days
24.6
DO50803
0 years, female, NA, stage:1, alive, 540 days
24.4
DO48747
0 years, male, NA, stage:3, alive, 540 days
24.4
DO45269
0 years, male, NA, stage:3, alive, 750 days
24.3
DO45092
0 years, male, NA, stage:4, dead, 1200 days
24.2
DO45281
0 years, male, NA, stage:4, alive, 750 days
24.0
DO48759
0 years, male, NA, stage:3, alive, 720 days
23.8
DO48681
0 years, male, NA, stage:2, alive, 900 days
23.8
DO45137
0 years, male, NA, stage:1, alive, 1320 days
23.7
DO48742
0 years, male, NA, stage:2, alive, 600 days
23.4
DO23521
0 years, male, NA, stage:3, alive, 1110 days
23.4
DO45259
0 years, male, NA, stage:3, alive, 330 days
23.4
DO48701
0 years, male, NA, stage:2, alive, 780 days
23.2
DO45153
0 years, female, NA, stage:2, alive, 1380 days
23.1
DO45253
0 years, male, NA, stage:2, alive, 870 days
23.1
DO45231
0 years, male, NA, stage:2, alive, 930 days
23.0
DO45095
0 years, male, NA, stage:2, alive, 1620 days
22.8
DO23537
0 years, male, NA, stage:2, dead, 900 days
22.6
DO48693
0 years, male, NA, stage:2, alive, 900 days
22.6
DO50809
0 years, male, NA, stage:3, dead, 720 days
22.5
DO50829
0 years, male, NA, stage:3, alive, 570 days
22.4
DO50806
0 years, male, NA, stage:4, alive, 540 days
22.1
DO45135
0 years, male, NA, stage:1, alive, 1410 days
21.9
DO50802
0 years, male, NA, stage:2, alive, 930 days
21.9
DO23533
0 years, male, NA, stage:2, alive, 900 days
21.7
DO23524
0 years, female, NA, stage:2, alive, 1050 days
21.6
DO48737
0 years, male, NA, stage:1, alive, 720 days
21.4
DO45161
0 years, male, NA, stage:2, dead, 540 days
21.3
DO48719
0 years, male, NA, stage:2, alive, 690 days
21.2
DO23510
0 years, female, NA, stage:2, alive, 870 days
21.0
DO48716
0 years, male, NA, stage:2, alive, 720 days
20.8
DO23544
0 years, male, NA, stage:2, alive, 960 days
20.6
DO45201
0 years, male, NA, stage:1, alive, 900 days
20.6
DO45203
0 years, female, NA, stage:2, alive, 1170 days
20.5
DO50799
0 years, female, NA, stage:2, alive, 540 days
20.5
DO45183
0 years, female, NA, stage:2, dead, 570 days
20.4
DO50840
0 years, male, NA, stage:2, alive, 330 days
20.4
DO50787
0 years, male, NA, stage:3, alive, 480 days
20.3
DO50811
0 years, male, NA, stage:1, alive, 450 days
20.2
DO48736
0 years, female, NA, stage:1, alive, 600 days
20.2
DO23529
0 years, male, NA, stage:4, alive, 930 days
20.1
DO45115
0 years, male, NA, stage:2, alive, 840 days
20.0
DO48677
0 years, male, NA, stage:3, alive, 1140 days
20.0
DO45207
0 years, male, NA, stage:1, alive, 1050 days
20.0
DO45239
0 years, male, NA, stage:2, alive, 870 days
19.9
DO45096
0 years, male, NA, stage:2, dead, 1290 days
19.8
DO45255
0 years, male, NA, stage:3, alive, 720 days
19.7
DO45243
0 years, female, NA, stage:3, alive, 930 days
19.5
DO45159
0 years, male, NA, stage:3, alive, 1470 days
19.5
DO48679
0 years, male, NA, stage:2, alive, 1200 days
19.4
DO45225
0 years, male, NA, stage:1, alive, 1050 days
19.1
DO45195
0 years, male, NA, stage:1, alive, 390 days
19.1
DO45257
0 years, male, NA, stage:3, alive, 810 days
19.1
DO48761
0 years, male, NA, stage:2, alive, 870 days
19.0
DO45181
0 years, female, NA, stage:2, alive, 1200 days
18.9
DO45235
0 years, female, NA, stage:1, alive, 900 days
18.8
DO48717
0 years, male, NA, stage:4, dead, 180 days
18.6
DO45197
0 years, male, NA, stage:2, alive, 1170 days
18.6
DO45209
0 years, male, NA, stage:4, alive, 1350 days
18.6
DO48672
0 years, male, NA, stage:2, alive, 450 days
18.5
DO23525
0 years, male, NA, stage:4, alive, 1050 days
18.5
DO45219
0 years, male, NA, stage:2, alive, 1080 days
18.3
DO23542
0 years, male, NA, stage:3, alive, 960 days
18.3
DO45233
0 years, male, NA, stage:3, alive, 900 days
18.2
DO45189
0 years, female, NA, stage:2, alive, 1200 days
18.1
DO50805
0 years, male, NA, stage:2, alive, 690 days
18.1
DO23552
0 years, female, NA, stage:1, alive, 810 days
17.8
DO45223
0 years, male, NA, stage:4, alive, 1020 days
17.6
DO45131
0 years, male, NA, stage:4, dead, 360 days
17.6
DO50783
0 years, male, NA, stage:3, alive, 480 days
17.6
DO50789
0 years, female, NA, stage:2, alive, 570 days
17.6
DO50808
0 years, male, NA, stage:2, alive, 570 days
17.4
DO48725
0 years, male, NA, stage:1, alive, 780 days
17.3
DO45097
0 years, male, NA, stage:3, alive, 1620 days
17.0
DO45221
0 years, female, NA, stage:4, dead, 390 days
17.0
DO48715
0 years, female, NA, stage:2, dead, 690 days
16.9
DO23541
0 years, male, NA, stage:2, alive, 930 days
16.9
DO45247
0 years, female, NA, stage:2, alive, 210 days
16.5
DO48695
0 years, male, NA, stage:2, alive, 720 days
16.5
DO23518
0 years, male, NA, stage:2, alive, 1320 days
16.5
DO45213
0 years, male, NA, stage:1, alive, 1200 days
16.4
DO45157
0 years, male, NA, stage:2, alive, 1980 days
16.4
DO45187
0 years, female, NA, stage:1, alive, 1260 days
16.3
DO45173
0 years, male, NA, stage:3, alive, 1170 days
16.2
DO45143
0 years, male, NA, stage:3, alive, 1290 days
16.1
DO45109
0 years, male, NA, stage:2, alive, 1590 days
16.1
DO48723
0 years, male, NA, stage:1, alive, 600 days
16.0
DO227643
0 years, male, NA, stage:2, alive, 1260 days
16.0
DO50798
0 years, male, NA, stage:3, dead, 30 days
15.8
DO50814
0 years, male, NA, stage:3, alive, 420 days
15.8
DO45199
0 years, female, NA, stage:2, alive, 1350 days
15.5
DO23550
0 years, male, NA, stage:1, alive, 990 days
15.4
DO45193
0 years, female, NA, stage:4, dead, 120 days
15.3
DO50820
0 years, female, NA, stage:3, alive, 510 days
15.3
DO48743
0 years, female, NA, stage:2, alive, 570 days
15.2
DO50785
0 years, male, NA, stage:4, dead, 90 days
15.1
DO45123
0 years, female, NA, stage:2, dead, 570 days
15.1
DO48712
0 years, male, NA, stage:2, alive, 810 days
15.0
DO45165
0 years, male, NA, stage:2, alive, 690 days
14.8
DO45119
0 years, male, NA, stage:3, dead, 510 days
14.8
DO50776
0 years, male, NA, stage:1, alive, 690 days
14.7
DO50822
0 years, male, NA, stage:2, alive, 510 days
14.7
DO227801
0 years, female, NA, stage:1, alive, 660 days
14.6
DO45129
0 years, male, NA, stage:3, alive, 1470 days
14.5
DO48704
0 years, female, NA, stage:3, alive, 750 days
14.5
DO45171
0 years, male, NA, stage:3, alive, 600 days
14.3
DO23517
0 years, male, NA, stage:2, alive, 1200 days
14.3
DO23531
0 years, female, NA, stage:3, alive, 900 days
14.1
DO45094
0 years, male, NA, stage:3, alive, 1650 days
14.0
DO48733
0 years, male, NA, stage:2, alive, 600 days
13.8
DO50807
0 years, male, NA, stage:1, alive, 540 days
13.8
DO50818
0 years, male, NA, stage:2, alive, 510 days
13.8
DO45261
0 years, male, NA, stage:3, alive, 990 days
13.8
DO45121
0 years, male, NA, stage:3, alive, 1530 days
13.7
DO23527
0 years, male, NA, stage:1, alive, 1050 days
13.7
DO45163
0 years, male, NA, stage:2, alive, 960 days
13.6
DO23536
0 years, male, NA, stage:2, alive, 930 days
13.6
DO45177
0 years, female, NA, stage:3, alive, 1260 days
13.5
DO45229
0 years, male, NA, stage:1, alive, 990 days
13.5
DO45099
0 years, male, NA, stage:3, alive, 1590 days
13.5
DO50774
0 years, female, NA, stage:2, alive, 720 days
13.4
DO45113
0 years, male, NA, stage:3, alive, 1560 days
13.4
DO50793
0 years, male, NA, stage:4, alive, 540 days
13.3
DO45191
0 years, female, NA, stage:2, alive, 1200 days
13.2
DO45091
0 years, male, NA, stage:2, dead, 1320 days
13.1
DO50804
0 years, male, NA, stage:2, alive, 720 days
13.0
DO48751
0 years, male, NA, stage:2, dead, 480 days
13.0
DO23551
0 years, male, NA, stage:3, dead, 150 days
12.9
DO45227
0 years, female, NA, stage:2, alive, 1020 days
12.7
DO23528
0 years, female, NA, stage:2, alive, 1020 days
12.7
DO23538
0 years, male, NA, stage:2, alive, 450 days
12.6
DO45117
0 years, female, NA, stage:2, dead, 1110 days
12.5
DO23545
0 years, male, NA, stage:2, dead, 570 days
12.4
DO48760
0 years, female, NA, stage:2, alive, 690 days
12.3
DO50825
0 years, male, NA, stage:2, alive, 390 days
12.2
DO50844
0 years, male, NA, stage:4, alive, 300 days
12.1
DO45237
0 years, male, NA, stage:2, alive, 900 days
12.1
DO23508
0 years, female, NA, stage:2, alive, 390 days
12.0
DO45175
0 years, male, NA, stage:2, alive, 1140 days
11.8
DO45133
0 years, male, NA, stage:3, dead, 660 days
11.6
DO50859
0 years, male, NA, stage:2, alive, 180 days
11.2
DO23511
0 years, female, NA, stage:3, dead, 180 days
11.2
DO50850
0 years, male, NA, stage:3, alive, 720 days
11.1
DO48721
0 years, female, NA, stage:1, alive, 900 days
11.1
DO48757
0 years, female, NA, stage:3, alive, 480 days
10.8
DO45179
0 years, female, NA, stage:2, alive, 600 days
10.7
DO48706
0 years, male, NA, stage:2, alive, 870 days
10.4
DO48727
0 years, female, NA, stage:2, dead, 390 days
10.4
DO50857
0 years, male, NA, stage:2, alive, 210 days
10.1
DO48741
0 years, male, NA, stage:3, alive, 240 days
9.4
DO50832
0 years, male, NA, stage:3, alive, 90 days
9.4
DO45111
0 years, male, NA, stage:2, alive, 1590 days
9.2
DO45093
0 years, male, NA, stage:2, dead, 720 days
8.9
DO45169
0 years, male, NA, stage:3, alive, 1350 days
8.8
DO48674
0 years, male, NA, stage:2, alive, 1260 days
8.8
DO50839
0 years, female, NA, stage:3, alive, 330 days
8.7
Show allShow less
LIVER HEPATOCELLULAR CARCINOMA - Protein relative expression (CPTAC)
Number of samples
330
Samples
Sample ID
Sample type
nRPX
445
Tumor
0.9
435
Tumor
0.9
343
Tumor
0.7
283
Tumor
0.6
211
Tumor
0.6
535
Tumor
0.6
351
Tumor
0.5
661
Tumor
0.5
536
Normal
0.5
217
Tumor
0.5
915
Tumor
0.5
857
Tumor
0.5
126
Normal
0.4
311
Tumor
0.4
468
Normal
0.4
917
Tumor
0.4
268
Normal
0.4
447
Tumor
0.4
464
Normal
0.4
434
Normal
0.4
124
Normal
0.4
125
Tumor
0.4
983
Tumor
0.4
466
Normal
0.4
452
Normal
0.4
456
Normal
0.4
135
Tumor
0.4
1043
Tumor
0.4
1015
Tumor
0.4
388
Normal
0.4
224
Normal
0.4
314
Normal
0.4
332
Normal
0.3
111
Normal
0.3
188
Normal
0.3
524
Normal
0.3
262
Normal
0.3
218
Normal
0.3
186
Normal
0.3
172
Normal
0.3
213
Tumor
0.3
444
Normal
0.3
813
Tumor
0.3
481
Tumor
0.3
954
Normal
0.3
744
Normal
0.3
232
Normal
0.3
196
Normal
0.3
978
Normal
0.3
815
Tumor
0.3
127
Tumor
0.3
258
Normal
0.3
148
Normal
0.3
627
Tumor
0.3
636
Normal
0.3
432
Normal
0.3
136
Normal
0.3
426
Normal
0.3
272
Normal
0.3
285
Tumor
0.3
114
Normal
0.3
818
Normal
0.3
214
Normal
0.3
396
Normal
0.3
423
Tumor
0.3
394
Normal
0.3
713
Tumor
0.2
222
Normal
0.2
162
Normal
0.2
278
Normal
0.2
1031
Tumor
0.2
914
Normal
0.2
722
Normal
0.2
195
Tumor
0.2
123
Tumor
0.2
362
Normal
0.2
392
Normal
0.2
414
Normal
0.2
192
Normal
0.2
615
Tumor
0.2
286
Normal
0.2
128
Normal
0.2
491
Tumor
0.2
574
Normal
0.2
671
Tumor
0.2
498
Normal
0.2
146
Normal
0.2
446
Normal
0.2
422
Normal
0.2
572
Normal
0.2
344
Normal
0.2
573
Tumor
0.2
963
Tumor
0.2
741
Tumor
0.2
185
Tumor
0.2
331
Tumor
0.2
1014
Normal
0.2
113
Tumor
0.2
298
Normal
0.2
742
Normal
0.2
916
Normal
0.2
824
Normal
0.2
814
Normal
0.2
851
Tumor
0.2
366
Normal
0.2
1025
Tumor
0.2
952
Normal
0.2
112
Tumor
0.2
968
Normal
0.2
448
Normal
0.2
568
Normal
0.2
357
Tumor
0.2
816
Normal
0.1
1026
Normal
0.1
312
Normal
0.1
138
Normal
0.1
261
Tumor
0.1
384
Normal
0.1
363
Tumor
0.1
412
Normal
0.1
1046
Normal
0.1
984
Normal
0.1
558
Normal
0.1
386
Normal
0.1
926
Normal
0.1
868
Normal
0.1
724
Normal
0.1
284
Normal
0.1
492
Normal
0.1
526
Normal
0.1
786
Normal
0.1
858
Normal
0.1
191
Tumor
0.1
411
Tumor
0.1
852
Normal
0.1
662
Normal
0.1
391
Tumor
0.1
721
Tumor
0.1
451
Tumor
0.1
738
Normal
0.1
516
Normal
0.1
478
Normal
0.1
467
Tumor
0.1
161
Tumor
0.1
1044
Normal
0.1
231
Tumor
0.1
697
Tumor
0.1
228
Normal
0.1
966
Normal
0.1
1027
Tumor
0.1
938
Normal
0.1
564
Normal
0.1
648
Normal
0.1
424
Normal
0.1
376
Normal
0.1
823
Tumor
0.1
528
Normal
0.1
358
Normal
0.1
664
Normal
0.1
514
Normal
0.1
465
Tumor
0.1
436
Normal
0.1
525
Tumor
0.1
943
Tumor
0.1
785
Tumor
0.1
878
Normal
0.1
518
Normal
0.1
421
Tumor
0.1
227
Tumor
0.1
616
Normal
0.1
327
Tumor
0.1
922
Normal
0.1
368
Normal
0.1
212
Normal
0.1
716
Normal
0.1
863
Tumor
0.1
956
Normal
0.1
977
Tumor
0.0
817
Tumor
0.0
428
Normal
0.0
1028
Normal
0.0
921
Tumor
0.0
563
Tumor
0.0
356
Normal
0.0
618
Normal
0.0
628
Normal
0.0
778
Normal
0.0
415
Tumor
0.0
433
Tumor
0.0
1016
Normal
0.0
696
Normal
0.0
367
Tumor
0.0
132
Normal
0.0
698
Normal
0.0
352
Normal
0.0
383
Tumor
0.0
1032
Normal
0.0
142
Normal
0.0
862
Normal
0.0
864
Normal
0.0
488
Normal
0.0
257
Tumor
0.0
964
Normal
0.0
965
Tumor
0.0
982
Normal
0.0
925
Tumor
0.0
171
Tumor
0.0
642
Normal
0.0
494
Normal
0.0
413
Tumor
0.0
557
Tumor
0.0
375
Tumor
0.0
918
Normal
0.0
385
Tumor
0.0
1041
Tumor
0.0
953
Tumor
0.0
1042
Normal
0.0
912
Normal
0.0
958
Normal
0.0
1022
Normal
0.0
695
Tumor
0.0
493
Tumor
0.0
911
Tumor
0.0
364
Normal
0.0
715
Tumor
0.0
328
Normal
0.0
686
Normal
0.0
866
Normal
0.0
416
Normal
0.0
342
Normal
0.0
743
Tumor
0.0
737
Tumor
0.0
955
Tumor
0.0
924
Normal
0.0
482
Normal
0.0
714
Normal
0.0
867
Tumor
0.0
728
Normal
0.0
223
Tumor
0.0
861
Tumor
0.0
746
Normal
0.0
277
Tumor
0.0
297
Tumor
0.0
647
Tumor
0.0
723
Tumor
0.0
976
Normal
0.0
944
Normal
0.0
1013
Tumor
0.0
187
Tumor
0.0
884
Normal
0.0
882
Normal
0.0
755
Tumor
-0.1
874
Normal
-0.1
427
Tumor
-0.1
951
Tumor
-0.1
513
Tumor
-0.1
462
Normal
-0.1
365
Tumor
-0.1
354
Normal
-0.1
756
Normal
-0.1
463
Tumor
-0.1
666
Normal
-0.1
975
Tumor
-0.1
1045
Tumor
-0.1
727
Tumor
-0.1
672
Normal
-0.1
567
Tumor
-0.1
267
Tumor
-0.1
523
Tumor
-0.1
663
Tumor
-0.1
461
Tumor
-0.1
483
Tumor
-0.1
571
Tumor
-0.1
313
Tumor
-0.1
554
Normal
-0.1
393
Tumor
-0.2
425
Tumor
-0.2
665
Tumor
-0.2
881
Tumor
-0.2
913
Tumor
-0.2
685
Tumor
-0.2
877
Tumor
-0.2
538
Normal
-0.2
455
Tumor
-0.2
387
Tumor
-0.2
545
Tumor
-0.2
443
Tumor
-0.2
431
Tumor
-0.2
474
Normal
-0.2
355
Tumor
-0.2
145
Tumor
-0.2
271
Tumor
-0.2
147
Tumor
-0.2
534
Normal
-0.2
641
Tumor
-0.2
473
Tumor
-0.3
957
Tumor
-0.3
981
Tumor
-0.3
745
Tumor
-0.3
1021
Tumor
-0.3
923
Tumor
-0.3
515
Tumor
-0.3
395
Tumor
-0.3
477
Tumor
-0.3
517
Tumor
-0.3
937
Tumor
-0.3
873
Tumor
-0.3
137
Tumor
-0.3
472
Normal
-0.3
546
Normal
-0.3
221
Tumor
-0.3
484
Normal
-0.3
141
Tumor
-0.4
967
Tumor
-0.4
527
Tumor
-0.4
471
Tumor
-0.4
353
Tumor
-0.4
131
Tumor
-0.4
635
Tumor
-0.4
487
Tumor
-0.4
341
Tumor
-0.4
553
Tumor
-0.4
777
Tumor
-0.4
361
Tumor
-0.5
883
Tumor
-0.5
865
Tumor
-0.5
497
Tumor
-0.5
617
Tumor
-0.5
533
Tumor
-0.6
537
Tumor
-0.7
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LIVER CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
