HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: High
RNA expressioni
Consensus:25.6 nTPM
HPA Brain:16.9 nTPM
GTEx:25.6 nTPM
FANTOM5:62.5 Scaled Tags Per Million
Pig:19.7 nTPM
Mouse:73.7 nTPM
Allen mouse:0.9 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA021234Antibody HPA029885
Glial cells MediumNot detected
Neuronal cells MediumHigh





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 16.9
Sample id Sample description nTPM
Hippocampus
nTPM: 15.9
1898 Male, age 80, left hemisphere 17.2
2148 Female, age 91, left hemisphere 16.8
2529 Female, age 94, left hemisphere 16.6
1855 Male, age 76, left hemisphere 15.8
2621 Female, age 67, right hemisphere 15.6
1911 Female, age 85, right hemisphere 13.2
Dentate gyrus
nTPM: 15.3
2531 Female, age 67, both hemispheres 16.5
2530 Female, age 94, left hemisphere 16.4
1927 Female, age 91, both hemispheres 15.2
2246 Female, age 85, both hemispheres 15.1
2528 Male, age 74, both hemispheres 14.6
2010 Male, age 76, both hemispheres 14.1
Entorhinal gyrus
nTPM: 16.1
2117 Female, age 91, right hemisphere 18.1
2764 Male, age 80, right hemisphere 18.1
1938 Female, age 85, left hemisphere 15.7
2613 Female, age 94, left hemisphere 15.4
1787 Male, age 76, left hemisphere 15.3
2686 Male, age 75, right hemisphere 14.0
Hippocampus, CA1
nTPM: 15.6
2749 Male, age 80, left hemisphere 18.5
1873 Female, age 85, both hemispheres 16.3
2527 Male, age 74, both hemispheres 15.1
2082 Female, age 91, right hemisphere 14.1
2045 Male, age 76, both hemispheres 14.0
Hippocampus, CA2
nTPM: 15.9
1963 Male, age 80, left hemisphere 18.4
1892 Male, age 76, both hemispheres 16.9
2437 Female, age 94, left hemisphere 16.9
2249 Male, age 74, both hemispheres 14.9
2113 Female, age 91, right hemisphere 14.8
1940 Female, age 85, left hemisphere 13.7
Hippocampus, CA3
nTPM: 16.9
2861 Female, age 67, both hemispheres 19.7
2620 Female, age 94, left hemisphere 17.9
2137 Male, age 80, left hemisphere 16.7
1891 Female, age 85, both hemispheres 16.6
2436 Male, age 74, both hemispheres 15.3
1867 Male, age 76, both hemispheres 14.9
Parahippocampal cortex
nTPM: 15.1
1850 Male, age 80, both hemispheres 19.0
2692 Male, age 74, both hemispheres 16.2
2018 Male, age 76, both hemispheres 15.6
2622 Female, age 67, right hemisphere 15.4
1990 Female, age 91, right hemisphere 15.3
1933 Female, age 85, both hemispheres 15.2
2250 Female, age 67, right hemisphere 15.0
2532 Female, age 72, left hemisphere 13.8
2693 Female, age 94, both hemispheres 13.1
2245 Female, age 91, both hemispheres 12.1
Perirhinal gyrus
nTPM: 15.6
1794 Male, age 80, right hemisphere 19.7
1841 Female, age 85, right hemisphere 16.2
1847 Female, age 91, left hemisphere 15.8
2848 Male, age 76, right hemisphere 15.2
2521 Female, age 94, right hemisphere 11.2
Subiculum
nTPM: 15.2
1977 Female, age 85, both hemispheres 16.7
2729 Female, age 91, right hemisphere 16.1
1901 Male, age 80, both hemispheres 15.8
2619 Male, age 74, both hemispheres 14.7
2042 Male, age 76, both hemispheres 14.0
2438 Female, age 94, left hemisphere 14.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 25.6
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 25.6
Samples: 197

Max nTPM: 41.3
Min nTPM: 10.8
Std nTPM: 5.2
Median nTPM: 25.3
GTEX-139T8-0011-R1a-SM-5HL75 60-69 years, male 41.3
GTEX-13FTY-0011-R1a-SM-5LZXE 40-49 years, female 37.2
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 37.1
GTEX-1H3VE-0011-R1a-SM-A9G1K 40-49 years, male 36.3
GTEX-13FHP-0011-R1b-SM-5K7XL 50-59 years, male 36.2
GTEX-Y8DK-0011-R1A-SM-4RGLO 60-69 years, male 35.5
GTEX-1IKK5-0011-R1b-SM-CE6SQ 60-69 years, male 34.7
GTEX-1A8G6-0011-R1a-SM-7P8PC 60-69 years, male 34.6
GTEX-11DXW-0011-R1a-SM-DNZZD 40-49 years, male 34.4
GTEX-1EWIQ-0011-R1a-SM-9OSX7 70-79 years, female 34.4
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 34.3
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 62.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 62.5
FF:10169-103B7 60 years, female 75.8
FF:10153-102I9 76 years, female 49.2

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 19.7
Pig sample Sample description nTPM
Subiculum
nTPM: 17.3
Samples: 4

Max nTPM: 26.0
Min nTPM: 11.0
Sample A Female 26.0
Sample B Female 17.1
Sample C Male 15.1
Sample D Male 11.0
Dorsal hippocampus
nTPM: 19.7
Samples: 4

Max nTPM: 30.5
Min nTPM: 11.5
Sample A Female 30.5
Sample B Female 18.7
Sample C Male 18.0
Sample D Male 11.5
Entorhinal cortex
nTPM: 16.1
Samples: 4

Max nTPM: 19.6
Min nTPM: 10.0
Sample A Female 19.6
Sample B Female 16.3
Sample C Male 18.3
Sample D Male 10.0
Ventral hippocampus
nTPM: 18.1
Samples: 4

Max nTPM: 20.8
Min nTPM: 15.2
Sample A Female 20.2
Sample B Female 15.2
Sample C Male 20.8
Sample D Male 16.3

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 73.7
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 65.6
Samples: 4

Max nTPM: 72.0
Min nTPM: 61.7
Sample A Male 62.5
Sample B Male 61.7
Sample C Female 72.0
Sample D Female 66.2
Hippocampal formation
nTPM: 73.7
Samples: 4

Max nTPM: 79.0
Min nTPM: 68.8
Sample A Male 79.0
Sample B Male 68.8
Sample C Female 73.6
Sample D Female 73.3

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 0.9
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.9
71654122 Antisense, RP_050927_03_D05, Mouse strain C57BL/6J (56 days, male) 0.9

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