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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
ALG8 is not prognostic in Liver Hepatocellular Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
29.4
Number of samples
362
Samples
Sample
Description
TPM
TCGA-UB-A7ME-01A
0 years, male, asian, stage:Stage I, alive, 486 days
119.9
TCGA-LG-A9QC-01A
0 years, male, white, stage:Stage I, alive, 425 days
82.4
TCGA-DD-AADP-01A
0 years, male, asian, stage:Stage I, alive, 458 days
80.0
TCGA-DD-A4NN-01A
0 years, female, white, stage:Stage I, dead, 899 days
77.9
TCGA-CC-A5UC-01A
0 years, male, asian, stage:Stage IIIA, dead, 347 days
67.9
TCGA-CC-5258-01A
0 years, male, asian, stage:Stage II, dead, 129 days
66.9
TCGA-DD-AADC-01A
0 years, male, asian, stage:Stage I, dead, 425 days
61.7
TCGA-DD-AACU-01A
0 years, male, asian, stage:Stage I, alive, 1567 days
61.4
TCGA-LG-A6GG-01A
0 years, female, white, stage:Stage II, alive, 387 days
61.0
TCGA-CC-A9FW-01A
0 years, male, asian, stage:Stage IIIA, alive, 248 days
60.6
TCGA-DD-A1EL-01A
0 years, male, black or african american, stage:Stage II, dead, 415 days
60.4
TCGA-2Y-A9HA-01A
0 years, male, white, stage:Stage II, dead, 36 days
60.1
TCGA-DD-AAE0-01A
0 years, female, asian, stage:Stage IIIA, alive, 555 days
59.5
TCGA-DD-A115-01A
0 years, male, white, stage:Stage IIIA, dead, 2542 days
59.1
TCGA-XR-A8TC-01A
0 years, female, white, stage:Stage I, alive, 1339 days
57.8
TCGA-DD-A1EJ-01A
0 years, female, white, stage:Stage IIIC, dead, 1005 days
54.9
TCGA-DD-AADW-01A
0 years, male, asian, stage:Stage I, alive, 587 days
54.5
TCGA-ZP-A9D2-01A
0 years, male, white, stage:'--, dead, 765 days
54.4
TCGA-DD-AADB-01A
0 years, male, asian, stage:Stage I, alive, 1242 days
53.2
TCGA-DD-A11B-01A
0 years, male, white, stage:Stage I, dead, 14 days
53.0
TCGA-BC-A10W-01A
0 years, male, asian, stage:'--, dead, 91 days
51.7
TCGA-MI-A75I-01A
0 years, male, black or african american, stage:'--, alive, 630 days
51.2
TCGA-G3-AAV4-01A
0 years, female, white, stage:Stage I, dead, 27 days
50.6
TCGA-2Y-A9H8-01A
0 years, female, white, stage:'--, dead, 633 days
50.4
TCGA-FV-A3R2-01A
0 years, male, white, stage:Stage I, dead, 194 days
49.9
TCGA-DD-A1EI-01A
0 years, male, asian, stage:Stage I, alive, 183 days
49.9
TCGA-G3-A25Y-01A
0 years, female, asian, stage:Stage I, dead, 452 days
49.8
TCGA-DD-A73E-01A
0 years, male, white, stage:Stage I, alive, 44 days
49.8
TCGA-DD-AACZ-01A
0 years, female, asian, stage:Stage I, dead, 171 days
49.7
TCGA-DD-A11C-01A
0 years, male, white, stage:Stage I, alive, 662 days
49.7
TCGA-2Y-A9GS-01A
0 years, male, white, stage:'--, dead, 724 days
49.0
TCGA-ED-A66X-01A
0 years, male, asian, stage:Stage IIIA, alive, 406 days
48.8
TCGA-BC-A10U-01A
0 years, male, white, stage:'--, dead, 837 days
48.8
TCGA-DD-A116-01A
0 years, male, asian, stage:Stage IIIA, dead, 1622 days
48.7
TCGA-DD-AAC8-01A
0 years, male, asian, stage:Stage I, dead, 16 days
48.5
TCGA-DD-AAD1-01A
0 years, female, asian, stage:Stage I, alive, 564 days
48.1
TCGA-ED-A8O5-01A
0 years, female, asian, stage:Stage IIIA, alive, 406 days
48.1
TCGA-G3-A7M9-01A
0 years, male, white, stage:Stage IIIB, dead, 56 days
47.9
TCGA-ED-A66Y-01A
0 years, female, asian, stage:Stage IIIA, dead, 296 days
47.5
TCGA-DD-A39W-01A
0 years, female, white, stage:Stage III, dead, 827 days
46.8
TCGA-DD-AACA-01A
0 years, male, asian, stage:Stage I, alive, 2301 days
46.4
TCGA-RC-A7SF-01A
0 years, male, asian, stage:Stage I, alive, 579 days
46.3
TCGA-G3-A5SL-01A
0 years, male, white, stage:Stage II, alive, 621 days
46.3
TCGA-BC-A10T-01A
0 years, male, white, stage:'--, dead, 837 days
45.9
TCGA-5C-A9VH-01A
0 years, male, white, stage:Stage I, alive, 322 days
45.7
TCGA-DD-A1EE-01A
0 years, male, white, stage:Stage IIIA, dead, 349 days
45.6
TCGA-DD-AAVW-01A
0 years, male, asian, stage:Stage I, alive, 2317 days
45.5
TCGA-CC-A7II-01A
0 years, male, asian, stage:Stage IIIA, alive, 399 days
45.3
TCGA-4R-AA8I-01A
0 years, male, white, stage:Stage II, dead, 262 days
45.3
TCGA-FV-A4ZQ-01A
0 years, male, white, stage:Stage I, alive, 12 days
44.6
TCGA-DD-AAW2-01A
0 years, male, asian, stage:Stage I, alive, 1855 days
44.4
TCGA-CC-A3MB-01A
0 years, male, asian, stage:Stage IIIA, dead, 315 days
44.3
TCGA-QA-A7B7-01A
0 years, male, black or african american, stage:Stage II, alive, 94 days
44.0
TCGA-DD-A3A8-01A
0 years, male, white, stage:Stage II, dead, 11 days
43.5
TCGA-T1-A6J8-01A
0 years, male, white, stage:'--, alive, 23 days
43.5
TCGA-DD-AAVS-01A
0 years, male, asian, stage:Stage I, alive, 1823 days
43.4
TCGA-CC-A7IL-01A
0 years, male, asian, stage:Stage IIIA, dead, 278 days
43.2
TCGA-DD-AAEE-01A
0 years, male, asian, stage:Stage I, alive, 810 days
42.8
TCGA-DD-AAE1-01A
0 years, male, asian, stage:Stage I, alive, 552 days
42.1
TCGA-DD-AAVY-01A
0 years, male, asian, stage:Stage IIIA, alive, 1970 days
41.9
TCGA-DD-AAVZ-01A
0 years, male, asian, stage:Stage I, alive, 1900 days
41.8
TCGA-G3-A5SI-01A
0 years, male, asian, stage:Stage II, dead, 768 days
41.7
TCGA-DD-A4NJ-01A
0 years, female, white, stage:Stage II, alive, 928 days
41.5
TCGA-DD-AACS-01A
0 years, male, asian, stage:Stage I, alive, 1804 days
41.3
TCGA-DD-A4NE-01A
0 years, female, white, stage:Stage IIIA, dead, 660 days
41.3
TCGA-DD-A118-01A
0 years, female, white, stage:Stage II, alive, 3437 days
41.2
TCGA-DD-A11D-01A
0 years, female, white, stage:Stage I, dead, 1560 days
41.0
TCGA-DD-AADD-01A
0 years, male, asian, stage:Stage I, alive, 1231 days
40.9
TCGA-DD-AAW3-01A
0 years, male, asian, stage:Stage I, alive, 1633 days
40.9
TCGA-RG-A7D4-01A
0 years, male, black or african american, stage:Stage II, alive, 1098 days
40.9
TCGA-DD-A1EH-01A
0 years, male, white, stage:Stage III, alive, 1495 days
40.8
TCGA-BD-A3EP-01A
0 years, female, black or african american, stage:Stage I, alive, 409 days
40.8
TCGA-RC-A7SK-01A
0 years, male, asian, stage:Stage I, alive, 472 days
40.7
TCGA-DD-AAW0-01A
0 years, male, asian, stage:Stage I, alive, 2015 days
40.6
TCGA-G3-A3CG-01A
0 years, male, white, stage:Stage I, alive, 673 days
40.5
TCGA-DD-A4NF-01A
0 years, male, white, stage:Stage I, alive, 942 days
40.4
TCGA-DD-AADK-01A
0 years, female, asian, stage:Stage II, alive, 1049 days
40.3
TCGA-CC-5260-01A
0 years, female, asian, stage:Stage IIIC, dead, 87 days
40.3
TCGA-FV-A3I1-01A
0 years, female, white, stage:Stage II, dead, 247 days
40.2
TCGA-DD-AACK-01A
0 years, male, asian, stage:Stage I, alive, 9 days
40.2
TCGA-UB-AA0U-01A
0 years, male, white, stage:Stage II, alive, 327 days
40.1
TCGA-EP-A3RK-01A
0 years, male, white, stage:Stage IIIA, alive, 363 days
39.9
TCGA-DD-AADL-01A
0 years, male, asian, stage:Stage I, alive, 636 days
39.8
TCGA-DD-AACW-01A
0 years, male, asian, stage:Stage I, alive, 1424 days
39.7
TCGA-ED-A459-01A
0 years, male, asian, stage:Stage II, alive, 910 days
39.7
TCGA-DD-AACN-01A
0 years, male, asian, stage:Stage I, alive, 1302 days
39.6
TCGA-DD-AAE9-01A
0 years, male, asian, stage:Stage I, alive, 722 days
38.6
TCGA-CC-A5UE-01A
0 years, male, asian, stage:Stage IIIB, dead, 272 days
38.5
TCGA-CC-A8HS-01A
0 years, male, asian, stage:Stage IIIC, dead, 300 days
38.3
TCGA-DD-AADV-01A
0 years, male, asian, stage:Stage I, alive, 574 days
38.1
TCGA-2Y-A9H5-01A
0 years, female, white, stage:Stage I, dead, 555 days
38.0
TCGA-EP-A2KC-01A
0 years, male, black or african american, stage:Stage I, dead, 19 days
37.9
TCGA-ED-A7XP-01A
0 years, female, asian, stage:Stage II, alive, 400 days
37.8
TCGA-DD-A73D-01A
0 years, female, white, stage:Stage II, alive, 693 days
37.8
TCGA-FV-A496-01A
0 years, female, white, stage:Stage I, alive, 10 days
37.8
TCGA-BC-A112-01A
0 years, male, white, stage:'--, dead, 153 days
37.5
TCGA-G3-AAV1-01A
0 years, male, asian, stage:Stage IIIC, dead, 359 days
37.4
TCGA-CC-5262-01A
0 years, male, asian, stage:Stage IIIC, dead, 103 days
37.4
TCGA-DD-A73B-01A
0 years, female, white, stage:Stage I, dead, 283 days
37.3
TCGA-DD-AAVP-01A
0 years, male, asian, stage:Stage I, alive, 2752 days
37.3
TCGA-DD-AAVQ-01A
0 years, male, asian, stage:Stage I, alive, 2728 days
37.2
TCGA-DD-A4NO-01A
0 years, male, white, stage:Stage I, alive, 2245 days
37.2
TCGA-ZP-A9D1-01A
0 years, female, white, stage:'--, alive, 21 days
37.2
TCGA-G3-AAV7-01A
0 years, male, asian, stage:Stage II, alive, 361 days
37.0
TCGA-DD-AADG-01A
0 years, male, asian, stage:Stage IIIA, alive, 1145 days
36.8
TCGA-CC-A1HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 101 days
36.5
TCGA-CC-5261-01A
0 years, male, asian, stage:Stage II, dead, 97 days
36.5
TCGA-G3-AAV5-01A
0 years, male, white, stage:Stage II, alive, 354 days
36.5
TCGA-RC-A6M6-01A
0 years, male, white, stage:Stage II, alive, 9 days
36.3
TCGA-BC-A3KF-01A
0 years, female, white, stage:Stage I, alive, 8 days
35.9
TCGA-DD-A4NQ-01A
0 years, male, white, stage:Stage II, dead, 373 days
35.9
TCGA-G3-A6UC-01A
0 years, male, white, stage:Stage IIIB, alive, 671 days
35.8
TCGA-G3-A3CK-01A
0 years, male, asian, stage:Stage I, alive, 585 days
35.7
TCGA-ED-A5KG-01A
0 years, female, asian, stage:Stage II, alive, 854 days
35.5
TCGA-GJ-A9DB-01A
0 years, male, white, stage:Stage I, dead, 67 days
35.4
TCGA-XR-A8TE-01A
0 years, male, white, stage:Stage IIIA, alive, 925 days
35.4
TCGA-FV-A23B-01A
0 years, female, white, stage:Stage II, dead, 1852 days
34.9
TCGA-BC-A5W4-01A
0 years, male, white, stage:Stage IIIA, dead, 547 days
34.8
TCGA-2Y-A9GZ-01A
0 years, female, white, stage:Stage II, dead, 848 days
34.1
TCGA-2Y-A9H7-01A
0 years, female, white, stage:Stage I, alive, 1168 days
33.9
TCGA-CC-A5UD-01A
0 years, male, asian, stage:Stage IIIA, dead, 304 days
33.8
TCGA-BC-A3KG-01A
0 years, female, white, stage:Stage II, alive, 680 days
33.5
TCGA-EP-A2KB-01A
0 years, female, white, stage:Stage I, dead, 596 days
33.1
TCGA-DD-A113-01A
0 years, female, white, stage:Stage II, alive, 2425 days
33.1
TCGA-DD-A4NH-01A
0 years, female, white, stage:Stage IIIB, alive, 917 days
33.0
TCGA-G3-AAV2-01A
0 years, male, white, stage:Stage I, alive, 372 days
33.0
TCGA-RC-A6M4-01A
0 years, female, white, stage:Stage IIIA, alive, 22 days
33.0
TCGA-DD-AAD0-01A
0 years, female, asian, stage:Stage I, alive, 137 days
32.8
TCGA-UB-A7MD-01A
0 years, male, black or african american, stage:Stage I, dead, 52 days
32.8
TCGA-DD-A1EA-01A
0 years, male, asian, stage:Stage II, alive, 2415 days
32.8
TCGA-DD-AACL-01A
0 years, female, asian, stage:Stage I, dead, 107 days
32.7
TCGA-BC-A69I-01A
0 years, male, white, stage:Stage I, alive, 387 days
32.6
TCGA-DD-A4NA-01A
0 years, female, white, stage:Stage IIIC, alive, 1008 days
32.6
TCGA-G3-AAV3-01A
0 years, female, white, stage:Stage II, alive, 412 days
32.3
TCGA-CC-A9FS-01A
0 years, male, asian, stage:Stage II, alive, 211 days
32.2
TCGA-DD-AADY-01A
0 years, female, asian, stage:Stage I, alive, 555 days
32.2
TCGA-XR-A8TF-01A
0 years, male, white, stage:Stage I, dead, 693 days
32.2
TCGA-DD-A39Y-01A
0 years, male, asian, stage:Stage I, dead, 171 days
32.2
TCGA-DD-A3A4-01A
0 years, male, white, stage:Stage IIIA, dead, 612 days
32.1
TCGA-CC-A7IJ-01A
0 years, male, asian, stage:Stage II, alive, 382 days
32.1
TCGA-CC-A8HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 140 days
32.1
TCGA-BC-A8YO-01A
0 years, female, white, stage:Stage IIIC, alive, 562 days
32.0
TCGA-EP-A12J-01A
0 years, male, black or african american, stage:Stage I, alive, 570 days
31.8
TCGA-DD-A4NS-01A
0 years, female, white, stage:Stage I, dead, 2456 days
31.6
TCGA-DD-A1EG-01A
0 years, male, white, stage:Stage I, dead, 1372 days
31.5
TCGA-HP-A5N0-01A
0 years, female, stage:'--, dead, 752 days
31.5
TCGA-DD-AACH-01A
0 years, male, asian, stage:Stage II, dead, 195 days
31.4
TCGA-DD-AAW1-01A
0 years, male, asian, stage:Stage IIIA, alive, 1989 days
31.4
TCGA-GJ-A6C0-01A
0 years, female, white, stage:Stage II, dead, 31 days
31.1
TCGA-DD-AACP-01A
0 years, male, asian, stage:Stage I, alive, 415 days
30.9
TCGA-O8-A75V-01A
0 years, male, stage:Stage I, alive, 538 days
30.9
TCGA-CC-A7IK-01A
0 years, male, asian, stage:Stage IIIA, dead, 262 days
30.8
TCGA-BC-A10Y-01A
0 years, male, white, stage:'--, dead, 711 days
30.7
TCGA-DD-AAD3-01A
0 years, male, asian, stage:Stage I, alive, 1295 days
30.6
TCGA-DD-AADR-01A
0 years, male, asian, stage:Stage I, alive, 2028 days
30.5
TCGA-FV-A2QQ-01A
0 years, male, white, stage:Stage I, alive, 729 days
30.1
TCGA-DD-AAE3-01A
0 years, male, asian, stage:Stage I, alive, 566 days
30.1
TCGA-MI-A75G-01A
0 years, male, white, stage:Stage II, alive, 698 days
29.9
TCGA-XR-A8TG-01A
0 years, male, white, stage:Stage I, alive, 898 days
29.9
TCGA-FV-A2QR-01A
0 years, male, white, stage:Stage I, dead, 581 days
29.9
TCGA-BC-A10Z-01A
0 years, female, white, stage:Stage I, dead, 34 days
29.8
TCGA-DD-AAEG-01A
0 years, female, asian, stage:Stage I, alive, 719 days
29.7
TCGA-ZP-A9CY-01A
0 years, female, white, stage:'--, alive, 782 days
29.5
TCGA-5R-AA1C-01A
0 years, male, white, stage:Stage II, alive, 520 days
29.5
TCGA-PD-A5DF-01A
0 years, female, white, stage:Stage IIIB, dead, 639 days
29.2
TCGA-CC-A8HV-01A
0 years, female, asian, stage:Stage II, dead, 279 days
29.2
TCGA-DD-A1EB-01A
0 years, female, stage:Stage I, alive, 2017 days
28.7
TCGA-ED-A4XI-01A
0 years, male, asian, stage:Stage II, alive, 819 days
28.6
TCGA-ZS-A9CE-01A
0 years, female, white, stage:Stage II, alive, 1241 days
28.6
TCGA-KR-A7K0-01A
0 years, male, white, stage:Stage I, dead, 65 days
28.5
TCGA-ED-A97K-01A
0 years, male, asian, stage:Stage IIIA, alive, 6 days
28.5
TCGA-ZS-A9CG-01A
0 years, male, white, stage:Stage II, alive, 341 days
28.3
TCGA-DD-AAVX-01A
0 years, male, asian, stage:Stage II, alive, 1718 days
28.3
TCGA-BW-A5NO-01A
0 years, male, black or african american, stage:Stage IIIA, alive, 20 days
28.2
TCGA-ZP-A9D0-01A
0 years, female, black or african american, stage:'--, alive, 1091 days
28.0
TCGA-DD-A1EF-01A
0 years, female, white, stage:Stage I, dead, 394 days
27.9
TCGA-G3-A25Z-01A
0 years, male, asian, stage:Stage I, alive, 655 days
27.8
TCGA-DD-A4NG-01A
0 years, male, white, stage:Stage IIIA, dead, 802 days
27.8
TCGA-DD-AA3A-01A
0 years, female, white, stage:Stage I, dead, 410 days
27.7
TCGA-5C-A9VG-01A
0 years, male, white, stage:Stage II, alive, 328 days
27.6
TCGA-DD-A4NV-01A
0 years, male, white, stage:Stage IIIA, alive, 2398 days
27.6
TCGA-GJ-A3OU-01A
0 years, male, white, stage:Stage I, alive, 879 days
27.6
TCGA-3K-AAZ8-01A
0 years, male, black or african american, stage:Stage IIIB, alive, 396 days
27.2
TCGA-DD-AACF-01A
0 years, male, asian, stage:Stage I, dead, 365 days
27.2
TCGA-DD-A4NR-01A
0 years, female, white, stage:Stage I, dead, 9 days
27.1
TCGA-CC-5264-01A
0 years, male, asian, stage:Stage IIIA, dead, 102 days
27.0
TCGA-DD-AAD2-01A
0 years, male, asian, stage:Stage I, alive, 658 days
26.8
TCGA-2Y-A9H9-01A
0 years, male, white, stage:Stage I, alive, 697 days
26.8
TCGA-ZP-A9CV-01A
0 years, male, white, stage:'--, dead, 1088 days
26.8
TCGA-K7-AAU7-01A
0 years, male, white, stage:Stage II, alive, 359 days
26.4
TCGA-ED-A7PX-01A
0 years, female, asian, stage:Stage II, alive, 6 days
26.4
TCGA-DD-A73C-01A
0 years, female, white, stage:Stage IIIA, alive, 701 days
26.4
TCGA-DD-A1EC-01A
0 years, female, white, stage:Stage I, alive, 602 days
26.3
TCGA-DD-A1EK-01A
0 years, female, white, stage:Stage IVB, dead, 558 days
26.1
TCGA-DD-AADU-01A
0 years, male, asian, stage:Stage II, alive, 554 days
25.9
TCGA-G3-A5SM-01A
0 years, male, white, stage:Stage II, alive, 520 days
25.5
TCGA-MI-A75H-01A
0 years, male, white, stage:'--, alive, 747 days
25.3
TCGA-RC-A7SH-01A
0 years, male, asian, stage:Stage II, alive, 468 days
25.3
TCGA-FV-A3R3-01A
0 years, female, white, stage:Stage I, dead, 366 days
25.1
TCGA-2Y-A9H0-01A
0 years, male, white, stage:Stage IIIA, alive, 3675 days
25.0
TCGA-NI-A8LF-01A
0 years, male, white, stage:Stage I, alive, 799 days
25.0
TCGA-DD-A114-01A
0 years, male, black or african american, stage:Stage II, dead, 1149 days
25.0
TCGA-ED-A8O6-01A
0 years, female, asian, stage:Stage IIIA, dead, 56 days
25.0
TCGA-MI-A75C-01A
0 years, male, white, stage:Stage I, alive, 291 days
24.9
TCGA-G3-A3CH-01A
0 years, male, asian, stage:Stage IIIA, alive, 780 days
24.9
TCGA-CC-5263-01A
0 years, male, asian, stage:Stage IIIA, dead, 129 days
24.9
TCGA-DD-AADA-01A
0 years, female, asian, stage:Stage I, alive, 1233 days
24.7
TCGA-ED-A7PY-01A
0 years, female, asian, stage:Stage II, alive, 390 days
24.7
TCGA-K7-A6G5-01A
0 years, male, white, stage:Stage I, alive, 512 days
24.7
TCGA-EP-A26S-01A
0 years, male, white, stage:Stage I, alive, 608 days
24.5
TCGA-G3-A7M5-01A
0 years, male, asian, stage:Stage I, alive, 447 days
24.4
TCGA-G3-A7M6-01A
0 years, female, white, stage:Stage I, alive, 632 days
24.4
TCGA-BC-A69H-01A
0 years, male, white, stage:Stage II, alive, 444 days
24.3
TCGA-UB-A7MB-01A
0 years, male, white, stage:Stage II, alive, 601 days
24.3
TCGA-BC-A217-01A
0 years, female, white, stage:Stage II, dead, 1397 days
24.1
TCGA-ZP-A9D4-01A
0 years, female, white, stage:'--, alive, 395 days
24.1
TCGA-WX-AA46-01A
0 years, male, white, stage:Stage II, alive, 756 days
24.0
TCGA-2Y-A9GX-01A
0 years, male, white, stage:Stage I, alive, 2442 days
24.0
TCGA-RC-A7S9-01A
0 years, female, asian, stage:Stage I, alive, 640 days
24.0
TCGA-FV-A3I0-01A
0 years, female, white, stage:Stage II, alive, 848 days
23.8
TCGA-CC-A7IE-01A
0 years, male, asian, stage:Stage IIIA, dead, 217 days
23.6
TCGA-2Y-A9GU-01A
0 years, female, white, stage:Stage I, alive, 1939 days
23.6
TCGA-CC-A8HU-01A
0 years, female, asian, stage:Stage IIIA, dead, 344 days
23.6
TCGA-CC-A3MC-01A
0 years, male, asian, stage:Stage IIIA, alive, 363 days
23.5
TCGA-DD-AAEH-01A
0 years, male, asian, stage:Stage I, alive, 784 days
23.4
TCGA-DD-AACJ-01A
0 years, male, asian, stage:Stage II, alive, 2102 days
23.4
TCGA-2Y-A9GV-01A
0 years, female, white, stage:Stage I, dead, 2532 days
23.4
TCGA-ED-A82E-01A
0 years, female, asian, stage:Stage IIIA, alive, 408 days
23.3
TCGA-DD-AAEK-01A
0 years, male, asian, stage:Stage II, alive, 1067 days
23.3
TCGA-ZP-A9CZ-01A
0 years, male, asian, stage:'--, alive, 706 days
23.3
TCGA-UB-A7MA-01A
0 years, female, white, stage:Stage II, alive, 848 days
23.2
TCGA-DD-A4NK-01A
0 years, female, white, stage:Stage IIIA, dead, 1210 days
23.2
TCGA-5R-AAAM-01A
0 years, female, white, stage:Stage II, dead, 46 days
23.1
TCGA-DD-A4NP-01A
0 years, male, white, stage:Stage I, alive, 3308 days
23.1
TCGA-DD-A73F-01A
0 years, female, white, stage:Stage I, alive, 1085 days
23.1
TCGA-DD-AACX-01A
0 years, male, asian, stage:Stage II, alive, 170 days
22.9
TCGA-G3-A25V-01A
0 years, male, white, stage:Stage I, alive, 860 days
22.7
TCGA-BC-A10Q-01A
0 years, female, white, stage:'--, dead, 1135 days
22.4
TCGA-UB-A7MC-01A
0 years, male, white, stage:Stage IIIA, alive, 500 days
22.4
TCGA-CC-A7IF-01A
0 years, male, asian, stage:Stage IIIA, dead, 649 days
22.3
TCGA-CC-A3MA-01A
0 years, male, asian, stage:Stage IIIA, dead, 303 days
22.3
TCGA-DD-AADM-01A
0 years, male, asian, stage:Stage II, dead, 12 days
22.1
TCGA-DD-A4ND-01A
0 years, female, white, stage:Stage I, alive, 2746 days
22.0
TCGA-BC-A216-01A
0 years, female, white, stage:Stage IIIA, alive, 1351 days
22.0
TCGA-DD-AAE2-01A
0 years, male, asian, stage:Stage I, alive, 638 days
21.8
TCGA-DD-AACT-01A
0 years, female, asian, stage:Stage I, alive, 1562 days
21.8
TCGA-2Y-A9GY-01A
0 years, female, white, stage:Stage II, dead, 757 days
21.8
TCGA-DD-AACE-01A
0 years, male, asian, stage:Stage I, alive, 2184 days
21.7
TCGA-DD-AAEA-01A
0 years, male, asian, stage:Stage I, alive, 575 days
21.7
TCGA-2Y-A9HB-01A
0 years, male, stage:Stage I, alive, 260 days
21.7
TCGA-MI-A75E-01A
0 years, male, white, stage:Stage IIIC, alive, 507 days
21.5
TCGA-DD-AAEI-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
21.4
TCGA-G3-A25U-01A
0 years, female, asian, stage:Stage I, alive, 1636 days
21.2
TCGA-DD-AAVU-01A
0 years, male, asian, stage:Stage II, alive, 2202 days
21.1
TCGA-DD-A39Z-01A
0 years, female, stage:Stage II, dead, 601 days
21.0
TCGA-DD-A1ED-01A
0 years, male, white, stage:Stage I, alive, 2301 days
20.9
TCGA-DD-A3A3-01A
0 years, male, asian, stage:Stage I, dead, 535 days
20.9
TCGA-DD-AADI-01A
0 years, female, asian, stage:Stage I, alive, 1085 days
20.7
TCGA-DD-A4NB-01A
0 years, male, white, stage:Stage I, alive, 989 days
20.3
TCGA-XR-A8TD-01A
0 years, female, white, stage:Stage IIIB, alive, 1030 days
20.3
TCGA-DD-AADQ-01A
0 years, male, asian, stage:Stage II, alive, 436 days
20.1
TCGA-G3-AAV6-01A
0 years, female, white, stage:Stage IIIA, dead, 65 days
20.1
TCGA-2Y-A9H6-01A
0 years, female, white, stage:Stage I, alive, 357 days
20.1
TCGA-ED-A7PZ-01A
0 years, male, asian, stage:Stage II, alive, 6 days
20.0
TCGA-K7-A5RF-01A
0 years, male, white, stage:Stage I, alive, 631 days
19.9
TCGA-DD-AAVV-01A
0 years, male, asian, stage:Stage II, alive, 2455 days
19.8
TCGA-2Y-A9H4-01A
0 years, male, black or african american, stage:Stage I, alive, 1452 days
19.8
TCGA-DD-AACV-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
19.7
TCGA-BD-A3ER-01A
0 years, male, white, stage:Stage II, alive, 1115 days
19.6
TCGA-G3-A25S-01A
0 years, male, white, stage:Stage I, dead, 416 days
19.3
TCGA-NI-A4U2-01A
0 years, male, white, stage:Stage IIIA, dead, 1791 days
19.3
TCGA-DD-A3A9-01A
0 years, female, white, stage:Stage IVB, dead, 931 days
19.2
TCGA-CC-A7IH-01A
0 years, male, asian, stage:Stage IIIA, alive, 365 days
19.2
TCGA-DD-A4NI-01A
0 years, male, white, stage:Stage II, alive, 816 days
19.2
TCGA-UB-AA0V-01A
0 years, female, white, stage:Stage I, alive, 314 days
19.1
TCGA-MR-A520-01A
0 years, male, white, stage:Stage I, alive, 229 days
19.0
TCGA-BD-A2L6-01A
0 years, male, white, stage:'--, alive, 1363 days
19.0
TCGA-DD-A3A5-01A
0 years, female, white, stage:Stage III, dead, 3125 days
19.0
TCGA-DD-AAVR-01A
0 years, male, asian, stage:Stage I, alive, 2513 days
18.8
TCGA-HP-A5MZ-01A
0 years, male, stage:Stage I, dead, 91 days
18.8
TCGA-ED-A627-01A
0 years, male, white, stage:Stage I, alive, 423 days
18.7
TCGA-CC-A3M9-01A
0 years, male, asian, stage:Stage IIIA, dead, 300 days
18.7
TCGA-DD-AADJ-01A
0 years, female, asian, stage:Stage I, alive, 1066 days
18.5
TCGA-KR-A7K8-01A
0 years, male, stage:Stage I, alive, 906 days
18.5
TCGA-G3-A7M7-01A
0 years, male, white, stage:Stage I, alive, 361 days
18.4
TCGA-2Y-A9GW-01A
0 years, male, white, stage:Stage I, dead, 1271 days
18.2
TCGA-DD-A3A2-01A
0 years, female, white, stage:Stage I, dead, 2131 days
18.1
TCGA-DD-A3A1-01A
0 years, male, stage:Stage IIIA, dead, 233 days
18.1
TCGA-RC-A6M5-01A
0 years, female, white, stage:Stage IVA, alive, 15 days
17.9
TCGA-BC-A10X-01A
0 years, female, white, stage:Stage IIIA, dead, 770 days
17.8
TCGA-ZS-A9CD-01A
0 years, male, white, stage:Stage II, dead, 1386 days
17.8
TCGA-DD-AACB-01A
0 years, female, asian, stage:Stage I, alive, 2324 days
17.7
TCGA-DD-A73A-01A
0 years, male, white, stage:Stage I, alive, 728 days
17.5
TCGA-G3-A3CJ-01A
0 years, male, american indian or alaska native, stage:Stage II, alive, 594 days
17.5
TCGA-UB-A7MF-01A
0 years, male, white, stage:Stage IIIA, dead, 214 days
17.4
TCGA-DD-AAE7-01A
0 years, male, asian, stage:Stage I, alive, 644 days
17.3
TCGA-G3-A5SK-01A
0 years, male, white, stage:Stage I, alive, 744 days
17.3
TCGA-ZS-A9CF-01A
0 years, male, white, stage:Stage II, alive, 2412 days
16.9
TCGA-DD-AAE6-01A
0 years, female, asian, stage:Stage I, alive, 141 days
16.9
TCGA-5R-AA1D-01A
0 years, female, white, stage:Stage IIIA, alive, 449 days
16.7
TCGA-KR-A7K7-01A
0 years, female, white, stage:Stage II, alive, 951 days
16.6
TCGA-DD-AADF-01A
0 years, female, asian, stage:Stage I, dead, 115 days
16.4
TCGA-G3-A3CI-01A
0 years, male, white, stage:Stage I, alive, 180 days
16.4
TCGA-DD-AACY-01A
0 years, male, asian, stage:Stage I, alive, 1450 days
16.3
TCGA-CC-A7IG-01A
0 years, male, asian, stage:Stage II, dead, 299 days
16.2
TCGA-DD-AACC-01A
0 years, male, asian, stage:Stage I, dead, 1685 days
16.0
TCGA-DD-A119-01A
0 years, male, asian, stage:Stage IV, dead, 223 days
15.9
TCGA-G3-A7M8-01A
0 years, male, asian, stage:Stage I, alive, 430 days
15.8
TCGA-BC-A10R-01A
0 years, female, white, stage:'--, dead, 308 days
15.7
TCGA-BC-A10S-01A
0 years, male, white, stage:'--, dead, 1423 days
15.7
TCGA-EP-A2KA-01A
0 years, female, white, stage:Stage IIIA, dead, 627 days
15.7
TCGA-DD-A4NL-01A
0 years, male, white, stage:Stage I, alive, 1711 days
15.5
TCGA-YA-A8S7-01A
0 years, male, white, stage:Stage IIIA, dead, 412 days
15.4
TCGA-RC-A7SB-01A
0 years, male, asian, stage:Stage II, alive, 588 days
15.3
TCGA-K7-A5RG-01A
0 years, male, black or african american, stage:Stage I, alive, 519 days
15.1
TCGA-WQ-A9G7-01A
0 years, female, white, stage:'--, alive, 30 days
14.8
TCGA-EP-A3JL-01A
0 years, male, white, stage:Stage I, alive, 303 days
14.7
TCGA-G3-A5SJ-01A
0 years, male, white, stage:Stage I, alive, 698 days
14.6
TCGA-2Y-A9GT-01A
0 years, male, white, stage:Stage I, dead, 1624 days
14.3
TCGA-WX-AA47-01A
0 years, female, white, stage:Stage IIIA, dead, 556 days
14.0
TCGA-G3-A25T-01A
0 years, female, white, stage:Stage IIIA, alive, 1553 days
13.8
TCGA-DD-AAC9-01A
0 years, male, asian, stage:Stage I, alive, 347 days
13.0
TCGA-WJ-A86L-01A
0 years, female, white, stage:Stage I, alive, 345 days
12.8
TCGA-BC-A110-01A
0 years, female, black or african american, stage:'--, dead, 2116 days
12.8
TCGA-G3-AAV0-01A
0 years, male, asian, stage:Stage I, alive, 476 days
12.7
TCGA-LG-A9QD-01A
0 years, male, white, stage:Stage IIIA, alive, 366 days
12.7
TCGA-ED-A7XO-01A
0 years, male, asian, stage:Stage IIIA, alive, 427 days
12.1
TCGA-DD-AAD5-01A
0 years, male, asian, stage:Stage I, alive, 1345 days
12.1
TCGA-MR-A8JO-01A
0 years, male, white, stage:Stage I, alive, 330 days
11.8
TCGA-WQ-AB4B-01A
0 years, male, white, stage:Stage II, alive, 395 days
11.4
TCGA-WX-AA44-01A
0 years, female, white, stage:Stage I, alive, 615 days
11.4
TCGA-DD-AACQ-01A
0 years, male, asian, stage:Stage II, dead, 432 days
11.4
TCGA-2Y-A9H2-01A
0 years, female, white, stage:Stage I, alive, 1731 days
11.3
TCGA-FV-A495-01A
0 years, female, white, stage:Stage II, alive, 1 days
11.3
TCGA-DD-A39V-01A
0 years, male, white, stage:Stage II, dead, 643 days
11.2
TCGA-DD-AACI-01A
0 years, male, asian, stage:Stage II, alive, 1618 days
10.8
TCGA-DD-AAED-01A
0 years, male, asian, stage:Stage I, alive, 763 days
10.7
TCGA-DD-AACD-01A
0 years, male, asian, stage:Stage I, dead, 381 days
9.9
TCGA-G3-A25X-01A
0 years, male, asian, stage:Stage II, alive, 1779 days
9.9
TCGA-DD-AADN-01A
0 years, male, asian, stage:Stage I, alive, 898 days
9.8
TCGA-KR-A7K2-01A
0 years, male, white, stage:Stage I, alive, 829 days
9.6
TCGA-ES-A2HT-01A
0 years, male, black or african american, stage:Stage I, dead, 438 days
9.3
TCGA-ES-A2HS-01A
0 years, male, white, stage:Stage I, dead, 688 days
9.0
TCGA-DD-AAD8-01A
0 years, female, asian, stage:Stage I, alive, 1219 days
9.0
TCGA-5C-AAPD-01A
0 years, male, asian, stage:Stage II, alive, 20 days
9.0
TCGA-DD-AADO-01A
0 years, male, asian, stage:Stage I, alive, 453 days
8.8
TCGA-DD-A39X-01A
0 years, female, white, stage:Stage I, dead, 1694 days
8.3
TCGA-DD-AACG-01A
0 years, male, asian, stage:Stage II, dead, 469 days
8.2
TCGA-2Y-A9H3-01A
0 years, male, white, stage:Stage II, alive, 1516 days
8.1
TCGA-DD-AAD6-01A
0 years, male, asian, stage:Stage IIIA, alive, 672 days
7.9
TCGA-2Y-A9H1-01A
0 years, male, white, stage:Stage I, dead, 1229 days
7.2
TCGA-DD-A3A6-01A
0 years, female, white, stage:Stage II, dead, 3258 days
7.1
TCGA-DD-AAE4-01A
0 years, female, asian, stage:Stage I, alive, 608 days
6.3
TCGA-G3-AAUZ-01A
0 years, male, stage:Stage I, alive, 480 days
6.0
TCGA-CC-5259-01A
0 years, female, asian, stage:Stage IIIC, alive, 250 days
5.7
TCGA-DD-AACO-01A
0 years, male, asian, stage:Stage I, alive, 1876 days
5.6
TCGA-DD-A73G-01A
0 years, female, white, stage:Stage I, alive, 3478 days
5.1
TCGA-DD-AAEB-01A
0 years, male, asian, stage:Stage I, alive, 478 days
4.9
TCGA-CC-A123-01A
0 years, female, asian, stage:Stage IIIA, alive, 219 days
4.4
TCGA-DD-AADS-01A
0 years, male, asian, stage:Stage I, alive, 474 days
3.9
TCGA-DD-A3A7-01A
0 years, male, stage:Stage IIIB, dead, 419 days
3.5
TCGA-FV-A4ZP-01A
0 years, male, white, stage:Stage IIIA, dead, 2486 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
ALG8 is not prognostic in Liver Hepatocellular Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
30.4
Number of samples
231
Samples
Sample
Description
TPM
DO45119
0 years, male, NA, stage:3, dead, 510 days
76.0
DO23515
0 years, male, NA, stage:2, alive, 1230 days
67.9
DO45145
0 years, male, NA, stage:3, dead, 60 days
66.4
DO50825
0 years, male, NA, stage:2, alive, 390 days
66.0
DO23552
0 years, female, NA, stage:1, alive, 810 days
62.9
DO45217
0 years, female, NA, stage:3, dead, 270 days
61.4
DO45227
0 years, female, NA, stage:2, alive, 1020 days
60.6
DO48701
0 years, male, NA, stage:2, alive, 780 days
60.3
DO45183
0 years, female, NA, stage:2, dead, 570 days
58.6
DO45097
0 years, male, NA, stage:3, alive, 1620 days
58.3
DO45219
0 years, male, NA, stage:2, alive, 1080 days
58.1
DO45127
0 years, male, NA, stage:3, dead, 420 days
58.0
DO48672
0 years, male, NA, stage:2, alive, 450 days
57.2
DO45221
0 years, female, NA, stage:4, dead, 390 days
56.7
DO48757
0 years, female, NA, stage:3, alive, 480 days
56.5
DO45239
0 years, male, NA, stage:2, alive, 870 days
54.5
DO48681
0 years, male, NA, stage:2, alive, 900 days
53.6
DO45137
0 years, male, NA, stage:1, alive, 1320 days
52.7
DO45173
0 years, male, NA, stage:3, alive, 1170 days
52.4
DO50850
0 years, male, NA, stage:3, alive, 720 days
51.0
DO50839
0 years, female, NA, stage:3, alive, 330 days
50.4
DO50791
0 years, female, NA, stage:1, dead, 480 days
50.0
DO45121
0 years, male, NA, stage:3, alive, 1530 days
49.7
DO45265
0 years, male, NA, stage:3, alive, 1020 days
48.9
DO45209
0 years, male, NA, stage:4, alive, 1350 days
48.9
DO45092
0 years, male, NA, stage:4, dead, 1200 days
48.6
DO23536
0 years, male, NA, stage:2, alive, 930 days
48.1
DO45273
0 years, male, NA, stage:2, alive, 480 days
47.8
DO45117
0 years, female, NA, stage:2, dead, 1110 days
47.6
DO50806
0 years, male, NA, stage:4, alive, 540 days
45.4
DO48733
0 years, male, NA, stage:2, alive, 600 days
45.0
DO50811
0 years, male, NA, stage:1, alive, 450 days
45.0
DO48697
0 years, female, NA, stage:2, dead, 810 days
44.9
DO45269
0 years, male, NA, stage:3, alive, 750 days
44.8
DO48706
0 years, male, NA, stage:2, alive, 870 days
44.5
DO48723
0 years, male, NA, stage:1, alive, 600 days
44.2
DO48737
0 years, male, NA, stage:1, alive, 720 days
43.1
DO48751
0 years, male, NA, stage:2, dead, 480 days
42.9
DO45203
0 years, female, NA, stage:2, alive, 1170 days
42.6
DO45275
0 years, male, NA, stage:3, dead, 10 days
42.4
DO48721
0 years, female, NA, stage:1, alive, 900 days
41.5
DO45171
0 years, male, NA, stage:3, alive, 600 days
41.4
DO23519
0 years, male, NA, stage:3, alive, 630 days
40.5
DO23508
0 years, female, NA, stage:2, alive, 390 days
40.2
DO23539
0 years, male, NA, stage:1, alive, 1110 days
39.7
DO45187
0 years, female, NA, stage:1, alive, 1260 days
39.4
DO45191
0 years, female, NA, stage:2, alive, 1200 days
38.9
DO23545
0 years, male, NA, stage:2, dead, 570 days
38.6
DO50822
0 years, male, NA, stage:2, alive, 510 days
38.5
DO48720
0 years, female, NA, stage:2, alive, 570 days
38.5
DO50855
0 years, male, NA, stage:2, alive, 570 days
38.3
DO48746
0 years, male, NA, stage:3, alive, 570 days
38.1
DO50802
0 years, male, NA, stage:2, alive, 930 days
38.1
DO50808
0 years, male, NA, stage:2, alive, 570 days
37.9
DO50778
0 years, male, NA, stage:4, alive, 630 days
37.8
DO45096
0 years, male, NA, stage:2, dead, 1290 days
37.6
DO48677
0 years, male, NA, stage:3, alive, 1140 days
37.5
DO23513
0 years, male, NA, stage:3, alive, 1200 days
37.5
DO23510
0 years, female, NA, stage:2, alive, 870 days
37.5
DO45247
0 years, female, NA, stage:2, alive, 210 days
37.2
DO45163
0 years, male, NA, stage:2, alive, 960 days
36.8
DO23516
0 years, male, NA, stage:3, dead, 20 days
36.7
DO45129
0 years, male, NA, stage:3, alive, 1470 days
36.0
DO45131
0 years, male, NA, stage:4, dead, 360 days
35.5
DO45185
0 years, male, NA, stage:2, alive, 600 days
35.4
DO45091
0 years, male, NA, stage:2, dead, 1320 days
35.2
DO48682
0 years, female, NA, stage:3, dead, 120 days
35.2
DO45179
0 years, female, NA, stage:2, alive, 600 days
34.7
DO48695
0 years, male, NA, stage:2, alive, 720 days
34.1
DO45133
0 years, male, NA, stage:3, dead, 660 days
34.1
DO50815
0 years, male, NA, stage:3, alive, 150 days
33.4
DO23535
0 years, male, NA, stage:1, alive, 960 days
33.3
DO45257
0 years, male, NA, stage:3, alive, 810 days
33.1
DO50793
0 years, male, NA, stage:4, alive, 540 days
33.1
DO45289
0 years, female, NA, stage:3, alive, 360 days
32.9
DO45213
0 years, male, NA, stage:1, alive, 1200 days
32.8
DO23540
0 years, male, NA, stage:1, alive, 750 days
32.7
DO23542
0 years, male, NA, stage:3, alive, 960 days
32.7
DO23526
0 years, male, NA, stage:3, alive, 1050 days
32.6
DO50783
0 years, male, NA, stage:3, alive, 480 days
32.3
DO45169
0 years, male, NA, stage:3, alive, 1350 days
32.1
DO48730
0 years, female, NA, stage:2, alive, 630 days
32.1
DO45113
0 years, male, NA, stage:3, alive, 1560 days
31.4
DO45223
0 years, male, NA, stage:4, alive, 1020 days
31.3
DO48736
0 years, female, NA, stage:1, alive, 600 days
31.3
DO45207
0 years, male, NA, stage:1, alive, 1050 days
31.2
DO50789
0 years, female, NA, stage:2, alive, 570 days
31.1
DO45199
0 years, female, NA, stage:2, alive, 1350 days
31.1
DO50804
0 years, male, NA, stage:2, alive, 720 days
31.0
DO50799
0 years, female, NA, stage:2, alive, 540 days
30.5
DO45243
0 years, female, NA, stage:3, alive, 930 days
30.5
DO23550
0 years, male, NA, stage:1, alive, 990 days
30.3
DO45267
0 years, male, NA, stage:3, dead, 570 days
30.3
DO45149
0 years, female, NA, stage:2, alive, 1260 days
30.1
DO48679
0 years, male, NA, stage:2, alive, 1200 days
30.1
DO45165
0 years, male, NA, stage:2, alive, 690 days
30.0
DO50857
0 years, male, NA, stage:2, alive, 210 days
30.0
DO23533
0 years, male, NA, stage:2, alive, 900 days
29.9
DO50829
0 years, male, NA, stage:3, alive, 570 days
29.9
DO45193
0 years, female, NA, stage:4, dead, 120 days
29.8
DO23521
0 years, male, NA, stage:3, alive, 1110 days
29.7
DO45161
0 years, male, NA, stage:2, dead, 540 days
29.5
DO23528
0 years, female, NA, stage:2, alive, 1020 days
29.3
DO50820
0 years, female, NA, stage:3, alive, 510 days
29.2
DO45211
0 years, male, NA, stage:3, alive, 240 days
29.1
DO23537
0 years, male, NA, stage:2, dead, 900 days
28.8
DO45189
0 years, female, NA, stage:2, alive, 1200 days
28.8
DO23524
0 years, female, NA, stage:2, alive, 1050 days
28.7
DO50776
0 years, male, NA, stage:1, alive, 690 days
28.7
DO48727
0 years, female, NA, stage:2, dead, 390 days
28.4
DO45229
0 years, male, NA, stage:1, alive, 990 days
28.3
DO23525
0 years, male, NA, stage:4, alive, 1050 days
28.2
DO45307
0 years, female, NA, stage:4, dead, 240 days
28.1
DO48728
0 years, female, NA, stage:2, alive, 150 days
28.1
DO45159
0 years, male, NA, stage:3, alive, 1470 days
28.1
DO23543
0 years, male, NA, stage:2, alive, 1020 days
27.9
DO48719
0 years, male, NA, stage:2, alive, 690 days
27.8
DO50814
0 years, male, NA, stage:3, alive, 420 days
27.7
DO48715
0 years, female, NA, stage:2, dead, 690 days
27.5
DO23511
0 years, female, NA, stage:3, dead, 180 days
27.4
DO45241
0 years, male, NA, stage:1, alive, 1080 days
27.4
DO48725
0 years, male, NA, stage:1, alive, 780 days
27.2
DO23527
0 years, male, NA, stage:1, alive, 1050 days
27.0
DO23529
0 years, male, NA, stage:4, alive, 930 days
26.8
DO23512
0 years, male, NA, stage:1, alive, 1260 days
26.8
DO48717
0 years, male, NA, stage:4, dead, 180 days
26.7
DO45281
0 years, male, NA, stage:4, alive, 750 days
26.6
DO45253
0 years, male, NA, stage:2, alive, 870 days
26.5
DO45305
0 years, male, NA, stage:4, alive, 300 days
26.4
DO48712
0 years, male, NA, stage:2, alive, 810 days
26.4
DO45205
0 years, female, NA, stage:2, dead, 90 days
26.4
DO45197
0 years, male, NA, stage:2, alive, 1170 days
26.4
DO45155
0 years, male, NA, stage:2, alive, 2160 days
26.3
DO45123
0 years, female, NA, stage:2, dead, 570 days
26.3
DO45297
0 years, female, NA, stage:4, dead, 1260 days
26.2
DO50840
0 years, male, NA, stage:2, alive, 330 days
26.1
DO45135
0 years, male, NA, stage:1, alive, 1410 days
26.1
DO45299
0 years, female, NA, stage:1, alive, 1440 days
26.0
DO50818
0 years, male, NA, stage:2, alive, 510 days
25.8
DO45143
0 years, male, NA, stage:3, alive, 1290 days
25.5
DO50809
0 years, male, NA, stage:3, dead, 720 days
25.3
DO48761
0 years, male, NA, stage:2, alive, 870 days
25.1
DO50807
0 years, male, NA, stage:1, alive, 540 days
25.0
DO50798
0 years, male, NA, stage:3, dead, 30 days
24.9
DO50859
0 years, male, NA, stage:2, alive, 180 days
24.9
DO45225
0 years, male, NA, stage:1, alive, 1050 days
24.7
DO45255
0 years, male, NA, stage:3, alive, 720 days
24.3
DO23547
0 years, male, NA, stage:1, alive, 1020 days
24.0
DO45099
0 years, male, NA, stage:3, alive, 1590 days
23.8
DO23541
0 years, male, NA, stage:2, alive, 930 days
23.7
DO50832
0 years, male, NA, stage:3, alive, 90 days
23.7
DO45231
0 years, male, NA, stage:2, alive, 930 days
23.5
DO45177
0 years, female, NA, stage:3, alive, 1260 days
23.5
DO48704
0 years, female, NA, stage:3, alive, 750 days
23.1
DO45245
0 years, female, NA, stage:2, dead, 240 days
23.1
DO50774
0 years, female, NA, stage:2, alive, 720 days
23.0
DO50845
0 years, male, NA, stage:3, alive, 210 days
22.9
DO45153
0 years, female, NA, stage:2, alive, 1380 days
22.8
DO45303
0 years, female, NA, stage:3, alive, 990 days
22.7
DO45301
0 years, male, NA, stage:2, dead, 1440 days
22.7
DO50813
0 years, male, NA, stage:2, alive, 420 days
22.7
DO45251
0 years, female, NA, stage:2, alive, 900 days
22.6
DO23548
0 years, female, NA, stage:1, alive, 840 days
22.6
DO45103
0 years, male, NA, stage:3, alive, 450 days
22.5
DO45201
0 years, male, NA, stage:1, alive, 900 days
22.0
DO23546
0 years, male, NA, stage:2, alive, 1050 days
21.9
DO48747
0 years, male, NA, stage:3, alive, 540 days
21.8
DO23534
0 years, male, NA, stage:2, alive, 840 days
21.8
DO48743
0 years, female, NA, stage:2, alive, 570 days
21.7
DO23514
0 years, male, NA, stage:2, alive, 1290 days
21.7
DO50844
0 years, male, NA, stage:4, alive, 300 days
21.6
DO50817
0 years, male, NA, stage:2, alive, 390 days
21.5
DO45157
0 years, male, NA, stage:2, alive, 1980 days
21.4
DO227801
0 years, female, NA, stage:1, alive, 660 days
21.3
DO45095
0 years, male, NA, stage:2, alive, 1620 days
21.3
DO48700
0 years, female, NA, stage:2, alive, 810 days
21.2
DO23538
0 years, male, NA, stage:2, alive, 450 days
21.1
DO48732
0 years, male, NA, stage:3, alive, 630 days
20.8
DO45175
0 years, male, NA, stage:2, alive, 1140 days
20.7
DO50805
0 years, male, NA, stage:2, alive, 690 days
20.4
DO48693
0 years, male, NA, stage:2, alive, 900 days
20.4
DO50785
0 years, male, NA, stage:4, dead, 90 days
20.3
DO48760
0 years, female, NA, stage:2, alive, 690 days
20.1
DO50816
0 years, male, NA, stage:2, alive, 390 days
20.0
DO45235
0 years, female, NA, stage:1, alive, 900 days
20.0
DO48716
0 years, male, NA, stage:2, alive, 720 days
19.8
DO48759
0 years, male, NA, stage:3, alive, 720 days
19.7
DO23523
0 years, male, NA, stage:3, alive, 1080 days
19.6
DO50787
0 years, male, NA, stage:3, alive, 480 days
19.6
DO45287
0 years, male, NA, stage:1, alive, 390 days
19.5
DO45139
0 years, male, NA, stage:3, alive, 1320 days
19.5
DO48674
0 years, male, NA, stage:2, alive, 1260 days
19.3
DO45279
0 years, male, NA, stage:3, alive, 1290 days
19.2
DO45167
0 years, male, NA, stage:2, dead, 1440 days
18.5
DO227643
0 years, male, NA, stage:2, alive, 1260 days
18.5
DO45277
0 years, male, NA, stage:3, alive, 600 days
18.5
DO45261
0 years, male, NA, stage:3, alive, 990 days
18.2
DO45233
0 years, male, NA, stage:3, alive, 900 days
18.1
DO45101
0 years, male, NA, stage:2, alive, 1680 days
17.9
DO45093
0 years, male, NA, stage:2, dead, 720 days
17.9
DO45285
0 years, male, NA, stage:3, alive, 480 days
17.7
DO23551
0 years, male, NA, stage:3, dead, 150 days
17.7
DO45141
0 years, male, NA, stage:2, alive, 1320 days
17.3
DO45115
0 years, male, NA, stage:2, alive, 840 days
17.1
DO45105
0 years, male, NA, stage:1, alive, 1680 days
17.0
DO23532
0 years, female, NA, stage:1, alive, 960 days
16.6
DO45249
0 years, male, NA, stage:1, alive, 630 days
16.6
DO45125
0 years, male, NA, stage:3, alive, 1680 days
16.5
DO23531
0 years, female, NA, stage:3, alive, 900 days
16.4
DO23518
0 years, male, NA, stage:2, alive, 1320 days
16.4
DO45195
0 years, male, NA, stage:1, alive, 390 days
16.2
DO23509
0 years, male, NA, stage:3, dead, 780 days
16.1
DO45259
0 years, male, NA, stage:3, alive, 330 days
16.1
DO48741
0 years, male, NA, stage:3, alive, 240 days
16.1
DO45094
0 years, male, NA, stage:3, alive, 1650 days
15.9
DO48742
0 years, male, NA, stage:2, alive, 600 days
15.6
DO45181
0 years, female, NA, stage:2, alive, 1200 days
15.4
DO50819
0 years, female, NA, stage:2, alive, 510 days
15.3
DO50803
0 years, female, NA, stage:1, alive, 540 days
14.9
DO45109
0 years, male, NA, stage:2, alive, 1590 days
14.9
DO45107
0 years, female, NA, stage:2, alive, 1710 days
14.8
DO45237
0 years, male, NA, stage:2, alive, 900 days
14.6
DO23549
0 years, male, NA, stage:3, alive, 990 days
14.1
DO50800
0 years, male, NA, stage:2, alive, 510 days
13.7
DO23544
0 years, male, NA, stage:2, alive, 960 days
13.1
DO45283
0 years, male, NA, stage:3, alive, 510 days
12.9
DO45263
0 years, male, NA, stage:3, dead, 270 days
12.5
DO45111
0 years, male, NA, stage:2, alive, 1590 days
12.3
DO45215
0 years, male, NA, stage:2, alive, 1170 days
12.3
DO23530
0 years, male, NA, stage:4, dead, 180 days
11.3
DO23517
0 years, male, NA, stage:2, alive, 1200 days
10.8
Show allShow less
LIVER HEPATOCELLULAR CARCINOMA - Protein relative expression (CPTAC)
Number of samples
330
Samples
Sample ID
Sample type
nRPX
635
Tumor
1.2
277
Tumor
1.0
473
Tumor
0.8
481
Tumor
0.7
745
Tumor
0.6
1027
Tumor
0.6
1043
Tumor
0.6
865
Tumor
0.6
666
Normal
0.5
1025
Tumor
0.5
465
Tumor
0.5
571
Tumor
0.5
937
Tumor
0.5
515
Tumor
0.5
328
Normal
0.4
527
Tumor
0.4
921
Tumor
0.4
424
Normal
0.4
523
Tumor
0.4
428
Normal
0.4
423
Tumor
0.4
257
Tumor
0.4
648
Normal
0.4
368
Normal
0.4
388
Normal
0.4
425
Tumor
0.4
358
Normal
0.4
627
Tumor
0.4
137
Tumor
0.4
615
Tumor
0.4
1021
Tumor
0.3
863
Tumor
0.3
352
Normal
0.3
864
Normal
0.3
537
Tumor
0.3
981
Tumor
0.3
393
Tumor
0.3
367
Tumor
0.3
823
Tumor
0.3
873
Tumor
0.3
851
Tumor
0.3
564
Normal
0.3
353
Tumor
0.3
672
Normal
0.3
356
Normal
0.3
923
Tumor
0.3
435
Tumor
0.3
125
Tumor
0.3
553
Tumor
0.3
533
Tumor
0.3
662
Normal
0.3
483
Tumor
0.3
867
Tumor
0.3
568
Normal
0.3
471
Tumor
0.3
223
Tumor
0.3
361
Tumor
0.3
384
Normal
0.3
915
Tumor
0.3
664
Normal
0.2
861
Tumor
0.2
858
Normal
0.2
982
Normal
0.2
341
Tumor
0.2
957
Tumor
0.2
426
Normal
0.2
172
Normal
0.2
463
Tumor
0.2
685
Tumor
0.2
857
Tumor
0.2
278
Normal
0.2
443
Tumor
0.2
386
Normal
0.2
491
Tumor
0.2
824
Normal
0.2
642
Normal
0.2
518
Normal
0.2
636
Normal
0.2
721
Tumor
0.2
357
Tumor
0.2
526
Normal
0.2
411
Tumor
0.2
391
Tumor
0.2
446
Normal
0.2
1045
Tumor
0.2
513
Tumor
0.2
113
Tumor
0.2
227
Tumor
0.2
665
Tumor
0.2
462
Normal
0.2
557
Tumor
0.2
376
Normal
0.2
671
Tumor
0.2
394
Normal
0.2
722
Normal
0.2
421
Tumor
0.2
261
Tumor
0.2
412
Normal
0.2
354
Normal
0.2
396
Normal
0.2
162
Normal
0.2
785
Tumor
0.1
392
Normal
0.1
1046
Normal
0.1
881
Tumor
0.1
534
Normal
0.1
271
Tumor
0.1
332
Normal
0.1
436
Normal
0.1
314
Normal
0.1
365
Tumor
0.1
187
Tumor
0.1
228
Normal
0.1
434
Normal
0.1
563
Tumor
0.1
951
Tumor
0.1
362
Normal
0.1
914
Normal
0.1
1016
Normal
0.1
171
Tumor
0.1
925
Tumor
0.1
777
Tumor
0.1
918
Normal
0.1
1014
Normal
0.1
852
Normal
0.1
186
Normal
0.1
713
Tumor
0.1
416
Normal
0.1
641
Tumor
0.1
755
Tumor
0.1
866
Normal
0.1
472
Normal
0.1
344
Normal
0.1
968
Normal
0.1
574
Normal
0.1
956
Normal
0.1
363
Tumor
0.1
926
Normal
0.1
816
Normal
0.1
455
Tumor
0.1
482
Normal
0.1
698
Normal
0.1
213
Tumor
0.1
214
Normal
0.1
616
Normal
0.1
628
Normal
0.1
195
Tumor
0.1
364
Normal
0.1
686
Normal
0.1
478
Normal
0.1
474
Normal
0.1
432
Normal
0.1
572
Normal
0.1
138
Normal
0.1
984
Normal
0.1
546
Normal
0.1
468
Normal
0.1
111
Normal
0.1
554
Normal
0.1
922
Normal
0.1
466
Normal
0.1
422
Normal
0.1
395
Tumor
0.1
818
Normal
0.1
212
Normal
0.1
815
Tumor
0.0
452
Normal
0.0
528
Normal
0.0
938
Normal
0.0
147
Tumor
0.0
494
Normal
0.0
366
Normal
0.0
741
Tumor
0.0
737
Tumor
0.0
663
Tumor
0.0
415
Tumor
0.0
192
Normal
0.0
132
Normal
0.0
723
Tumor
0.0
112
Tumor
0.0
498
Normal
0.0
343
Tumor
0.0
618
Normal
0.0
913
Tumor
0.0
185
Tumor
0.0
488
Normal
0.0
484
Normal
0.0
224
Normal
0.0
497
Tumor
0.0
525
Tumor
0.0
954
Normal
0.0
487
Tumor
0.0
535
Tumor
0.0
464
Normal
0.0
461
Tumor
0.0
142
Normal
0.0
114
Normal
0.0
312
Normal
0.0
516
Normal
0.0
514
Normal
0.0
874
Normal
0.0
126
Normal
0.0
327
Tumor
0.0
448
Normal
0.0
647
Tumor
0.0
976
Normal
0.0
492
Normal
0.0
128
Normal
0.0
975
Tumor
0.0
967
Tumor
0.0
433
Tumor
0.0
1044
Normal
0.0
342
Normal
0.0
742
Normal
0.0
383
Tumor
0.0
148
Normal
0.0
493
Tumor
0.0
1031
Tumor
0.0
188
Normal
0.0
232
Normal
0.0
716
Normal
0.0
983
Tumor
0.0
262
Normal
0.0
258
Normal
0.0
746
Normal
0.0
123
Tumor
-0.1
286
Normal
-0.1
953
Tumor
-0.1
131
Tumor
-0.1
738
Normal
-0.1
272
Normal
-0.1
573
Tumor
-0.1
444
Normal
-0.1
477
Tumor
-0.1
878
Normal
-0.1
1013
Tumor
-0.1
944
Normal
-0.1
431
Tumor
-0.1
517
Tumor
-0.1
311
Tumor
-0.1
467
Tumor
-0.1
231
Tumor
-0.1
862
Normal
-0.1
868
Normal
-0.1
617
Tumor
-0.1
145
Tumor
-0.1
958
Normal
-0.1
1028
Normal
-0.1
445
Tumor
-0.1
558
Normal
-0.1
298
Normal
-0.1
714
Normal
-0.1
661
Tumor
-0.1
817
Tumor
-0.1
355
Tumor
-0.1
524
Normal
-0.1
191
Tumor
-0.1
268
Normal
-0.1
127
Tumor
-0.1
196
Normal
-0.1
924
Normal
-0.1
952
Normal
-0.1
728
Normal
-0.1
1026
Normal
-0.1
387
Tumor
-0.1
697
Tumor
-0.1
313
Tumor
-0.1
966
Normal
-0.1
284
Normal
-0.1
943
Tumor
-0.1
456
Normal
-0.1
877
Tumor
-0.1
695
Tumor
-0.1
161
Tumor
-0.1
297
Tumor
-0.1
414
Normal
-0.1
744
Normal
-0.1
451
Tumor
-0.1
427
Tumor
-0.1
136
Normal
-0.1
413
Tumor
-0.2
375
Tumor
-0.2
786
Normal
-0.2
351
Tumor
-0.2
917
Tumor
-0.2
965
Tumor
-0.2
955
Tumor
-0.2
1042
Normal
-0.2
267
Tumor
-0.2
978
Normal
-0.2
447
Tumor
-0.2
814
Normal
-0.2
545
Tumor
-0.2
124
Normal
-0.2
141
Tumor
-0.2
696
Normal
-0.2
217
Tumor
-0.2
221
Tumor
-0.2
727
Tumor
-0.2
882
Normal
-0.3
536
Normal
-0.3
756
Normal
-0.3
567
Tumor
-0.3
1015
Tumor
-0.3
963
Tumor
-0.3
911
Tumor
-0.3
1032
Normal
-0.4
538
Normal
-0.4
964
Normal
-0.4
778
Normal
-0.4
222
Normal
-0.4
385
Tumor
-0.4
146
Normal
-0.4
218
Normal
-0.4
724
Normal
-0.4
211
Tumor
-0.5
135
Tumor
-0.5
331
Tumor
-0.5
813
Tumor
-0.5
285
Tumor
-0.5
884
Normal
-0.5
715
Tumor
-0.5
916
Normal
-0.6
912
Normal
-0.6
1022
Normal
-0.6
977
Tumor
-0.6
743
Tumor
-0.6
283
Tumor
-0.6
1041
Tumor
-0.7
883
Tumor
-1.0
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LIVER CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.