We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
TOMM40L is not prognostic in Liver Hepatocellular Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
11.4
Number of samples
362
Samples
Sample
Description
TPM
TCGA-BC-A10W-01A
0 years, male, asian, stage:'--, dead, 91 days
82.7
TCGA-G3-AAV7-01A
0 years, male, asian, stage:Stage II, alive, 361 days
44.8
TCGA-CC-A3MC-01A
0 years, male, asian, stage:Stage IIIA, alive, 363 days
42.3
TCGA-DD-AACZ-01A
0 years, female, asian, stage:Stage I, dead, 171 days
41.9
TCGA-DD-AACH-01A
0 years, male, asian, stage:Stage II, dead, 195 days
41.1
TCGA-CC-5258-01A
0 years, male, asian, stage:Stage II, dead, 129 days
41.0
TCGA-2Y-A9HA-01A
0 years, male, white, stage:Stage II, dead, 36 days
40.0
TCGA-5C-A9VG-01A
0 years, male, white, stage:Stage II, alive, 328 days
39.6
TCGA-DD-AADW-01A
0 years, male, asian, stage:Stage I, alive, 587 days
35.5
TCGA-FV-A2QR-01A
0 years, male, white, stage:Stage I, dead, 581 days
34.8
TCGA-UB-A7MB-01A
0 years, male, white, stage:Stage II, alive, 601 days
34.7
TCGA-2Y-A9H7-01A
0 years, female, white, stage:Stage I, alive, 1168 days
33.4
TCGA-2Y-A9GU-01A
0 years, female, white, stage:Stage I, alive, 1939 days
33.1
TCGA-CC-A5UE-01A
0 years, male, asian, stage:Stage IIIB, dead, 272 days
32.0
TCGA-DD-AADB-01A
0 years, male, asian, stage:Stage I, alive, 1242 days
31.8
TCGA-CC-A8HS-01A
0 years, male, asian, stage:Stage IIIC, dead, 300 days
30.6
TCGA-ZP-A9CV-01A
0 years, male, white, stage:'--, dead, 1088 days
30.0
TCGA-CC-A3MB-01A
0 years, male, asian, stage:Stage IIIA, dead, 315 days
29.4
TCGA-G3-A25Y-01A
0 years, female, asian, stage:Stage I, dead, 452 days
28.6
TCGA-G3-A3CG-01A
0 years, male, white, stage:Stage I, alive, 673 days
28.4
TCGA-DD-A1EH-01A
0 years, male, white, stage:Stage III, alive, 1495 days
28.2
TCGA-ZP-A9D2-01A
0 years, male, white, stage:'--, dead, 765 days
28.1
TCGA-DD-A1EJ-01A
0 years, female, white, stage:Stage IIIC, dead, 1005 days
27.6
TCGA-BC-A10U-01A
0 years, male, white, stage:'--, dead, 837 days
27.2
TCGA-DD-AAW0-01A
0 years, male, asian, stage:Stage I, alive, 2015 days
27.0
TCGA-DD-A113-01A
0 years, female, white, stage:Stage II, alive, 2425 days
26.7
TCGA-ED-A7XP-01A
0 years, female, asian, stage:Stage II, alive, 400 days
26.7
TCGA-CC-5263-01A
0 years, male, asian, stage:Stage IIIA, dead, 129 days
26.2
TCGA-DD-A4NE-01A
0 years, female, white, stage:Stage IIIA, dead, 660 days
25.1
TCGA-ZP-A9D0-01A
0 years, female, black or african american, stage:'--, alive, 1091 days
25.1
TCGA-DD-AADD-01A
0 years, male, asian, stage:Stage I, alive, 1231 days
25.0
TCGA-DD-A1EF-01A
0 years, female, white, stage:Stage I, dead, 394 days
23.8
TCGA-CC-A9FW-01A
0 years, male, asian, stage:Stage IIIA, alive, 248 days
23.5
TCGA-DD-AACS-01A
0 years, male, asian, stage:Stage I, alive, 1804 days
23.4
TCGA-DD-A4NQ-01A
0 years, male, white, stage:Stage II, dead, 373 days
23.3
TCGA-DD-AAEG-01A
0 years, female, asian, stage:Stage I, alive, 719 days
23.2
TCGA-ED-A66X-01A
0 years, male, asian, stage:Stage IIIA, alive, 406 days
23.2
TCGA-DD-A118-01A
0 years, female, white, stage:Stage II, alive, 3437 days
23.2
TCGA-DD-AACE-01A
0 years, male, asian, stage:Stage I, alive, 2184 days
23.0
TCGA-DD-A39Y-01A
0 years, male, asian, stage:Stage I, dead, 171 days
23.0
TCGA-DD-A114-01A
0 years, male, black or african american, stage:Stage II, dead, 1149 days
22.6
TCGA-G3-AAV5-01A
0 years, male, white, stage:Stage II, alive, 354 days
22.6
TCGA-ED-A7PX-01A
0 years, female, asian, stage:Stage II, alive, 6 days
22.5
TCGA-WJ-A86L-01A
0 years, female, white, stage:Stage I, alive, 345 days
22.0
TCGA-DD-AACW-01A
0 years, male, asian, stage:Stage I, alive, 1424 days
22.0
TCGA-FV-A23B-01A
0 years, female, white, stage:Stage II, dead, 1852 days
21.9
TCGA-DD-AAD3-01A
0 years, male, asian, stage:Stage I, alive, 1295 days
21.6
TCGA-DD-AAVW-01A
0 years, male, asian, stage:Stage I, alive, 2317 days
21.5
TCGA-2Y-A9H5-01A
0 years, female, white, stage:Stage I, dead, 555 days
21.4
TCGA-UB-A7MF-01A
0 years, male, white, stage:Stage IIIA, dead, 214 days
21.4
TCGA-DD-AAD1-01A
0 years, female, asian, stage:Stage I, alive, 564 days
21.2
TCGA-DD-A4NH-01A
0 years, female, white, stage:Stage IIIB, alive, 917 days
21.1
TCGA-XR-A8TC-01A
0 years, female, white, stage:Stage I, alive, 1339 days
21.1
TCGA-UB-AA0U-01A
0 years, male, white, stage:Stage II, alive, 327 days
20.7
TCGA-DD-AADY-01A
0 years, female, asian, stage:Stage I, alive, 555 days
20.7
TCGA-BC-A8YO-01A
0 years, female, white, stage:Stage IIIC, alive, 562 days
20.5
TCGA-CC-5261-01A
0 years, male, asian, stage:Stage II, dead, 97 days
20.1
TCGA-RC-A6M6-01A
0 years, male, white, stage:Stage II, alive, 9 days
20.0
TCGA-DD-AAVV-01A
0 years, male, asian, stage:Stage II, alive, 2455 days
19.9
TCGA-2Y-A9H6-01A
0 years, female, white, stage:Stage I, alive, 357 days
19.9
TCGA-DD-AAD0-01A
0 years, female, asian, stage:Stage I, alive, 137 days
19.7
TCGA-FV-A3I1-01A
0 years, female, white, stage:Stage II, dead, 247 days
19.6
TCGA-G3-A7M9-01A
0 years, male, white, stage:Stage IIIB, dead, 56 days
19.5
TCGA-DD-AAVZ-01A
0 years, male, asian, stage:Stage I, alive, 1900 days
19.3
TCGA-DD-A4NJ-01A
0 years, female, white, stage:Stage II, alive, 928 days
19.0
TCGA-DD-AAVS-01A
0 years, male, asian, stage:Stage I, alive, 1823 days
18.7
TCGA-DD-A1EE-01A
0 years, male, white, stage:Stage IIIA, dead, 349 days
18.7
TCGA-DD-A39W-01A
0 years, female, white, stage:Stage III, dead, 827 days
18.4
TCGA-G3-A7M6-01A
0 years, female, white, stage:Stage I, alive, 632 days
18.3
TCGA-DD-A1EI-01A
0 years, male, asian, stage:Stage I, alive, 183 days
18.3
TCGA-ZP-A9CZ-01A
0 years, male, asian, stage:'--, alive, 706 days
18.3
TCGA-DD-A73D-01A
0 years, female, white, stage:Stage II, alive, 693 days
18.1
TCGA-ED-A5KG-01A
0 years, female, asian, stage:Stage II, alive, 854 days
18.1
TCGA-BC-A216-01A
0 years, female, white, stage:Stage IIIA, alive, 1351 days
18.0
TCGA-DD-A4NR-01A
0 years, female, white, stage:Stage I, dead, 9 days
18.0
TCGA-DD-A11D-01A
0 years, female, white, stage:Stage I, dead, 1560 days
18.0
TCGA-2Y-A9GS-01A
0 years, male, white, stage:'--, dead, 724 days
17.5
TCGA-G3-AAV4-01A
0 years, female, white, stage:Stage I, dead, 27 days
17.4
TCGA-LG-A9QC-01A
0 years, male, white, stage:Stage I, alive, 425 days
17.3
TCGA-5R-AA1C-01A
0 years, male, white, stage:Stage II, alive, 520 days
17.0
TCGA-DD-A73E-01A
0 years, male, white, stage:Stage I, alive, 44 days
17.0
TCGA-DD-AADK-01A
0 years, female, asian, stage:Stage II, alive, 1049 days
16.8
TCGA-ZP-A9D1-01A
0 years, female, white, stage:'--, alive, 21 days
16.8
TCGA-DD-A1EG-01A
0 years, male, white, stage:Stage I, dead, 1372 days
16.6
TCGA-FV-A3R3-01A
0 years, female, white, stage:Stage I, dead, 366 days
16.2
TCGA-DD-AACN-01A
0 years, male, asian, stage:Stage I, alive, 1302 days
16.1
TCGA-CC-5264-01A
0 years, male, asian, stage:Stage IIIA, dead, 102 days
15.9
TCGA-FV-A3R2-01A
0 years, male, white, stage:Stage I, dead, 194 days
15.8
TCGA-GJ-A3OU-01A
0 years, male, white, stage:Stage I, alive, 879 days
15.2
TCGA-O8-A75V-01A
0 years, male, stage:Stage I, alive, 538 days
15.1
TCGA-DD-AACX-01A
0 years, male, asian, stage:Stage II, alive, 170 days
15.1
TCGA-XR-A8TE-01A
0 years, male, white, stage:Stage IIIA, alive, 925 days
15.1
TCGA-2Y-A9GX-01A
0 years, male, white, stage:Stage I, alive, 2442 days
15.1
TCGA-DD-AAD2-01A
0 years, male, asian, stage:Stage I, alive, 658 days
14.8
TCGA-UB-A7MA-01A
0 years, female, white, stage:Stage II, alive, 848 days
14.8
TCGA-CC-A7IK-01A
0 years, male, asian, stage:Stage IIIA, dead, 262 days
14.8
TCGA-2Y-A9H9-01A
0 years, male, white, stage:Stage I, alive, 697 days
14.8
TCGA-DD-A39X-01A
0 years, female, white, stage:Stage I, dead, 1694 days
14.7
TCGA-CC-A3MA-01A
0 years, male, asian, stage:Stage IIIA, dead, 303 days
14.5
TCGA-CC-A8HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 140 days
14.5
TCGA-2Y-A9GW-01A
0 years, male, white, stage:Stage I, dead, 1271 days
14.4
TCGA-RC-A7SK-01A
0 years, male, asian, stage:Stage I, alive, 472 days
14.3
TCGA-G3-A3CK-01A
0 years, male, asian, stage:Stage I, alive, 585 days
14.1
TCGA-BC-A10R-01A
0 years, female, white, stage:'--, dead, 308 days
14.0
TCGA-FV-A496-01A
0 years, female, white, stage:Stage I, alive, 10 days
13.7
TCGA-BC-A112-01A
0 years, male, white, stage:'--, dead, 153 days
13.7
TCGA-MI-A75I-01A
0 years, male, black or african american, stage:'--, alive, 630 days
13.5
TCGA-2Y-A9HB-01A
0 years, male, stage:Stage I, alive, 260 days
13.5
TCGA-DD-AAW3-01A
0 years, male, asian, stage:Stage I, alive, 1633 days
13.5
TCGA-DD-AACK-01A
0 years, male, asian, stage:Stage I, alive, 9 days
13.4
TCGA-CC-5262-01A
0 years, male, asian, stage:Stage IIIC, dead, 103 days
13.4
TCGA-DD-AADC-01A
0 years, male, asian, stage:Stage I, dead, 425 days
13.4
TCGA-DD-A3A4-01A
0 years, male, white, stage:Stage IIIA, dead, 612 days
13.4
TCGA-ED-A66Y-01A
0 years, female, asian, stage:Stage IIIA, dead, 296 days
13.4
TCGA-DD-A4NO-01A
0 years, male, white, stage:Stage I, alive, 2245 days
13.3
TCGA-G3-A25U-01A
0 years, female, asian, stage:Stage I, alive, 1636 days
13.3
TCGA-GJ-A9DB-01A
0 years, male, white, stage:Stage I, dead, 67 days
13.2
TCGA-ZS-A9CD-01A
0 years, male, white, stage:Stage II, dead, 1386 days
13.2
TCGA-5C-A9VH-01A
0 years, male, white, stage:Stage I, alive, 322 days
13.1
TCGA-DD-AAEK-01A
0 years, male, asian, stage:Stage II, alive, 1067 days
13.0
TCGA-EP-A2KB-01A
0 years, female, white, stage:Stage I, dead, 596 days
12.8
TCGA-CC-A8HU-01A
0 years, female, asian, stage:Stage IIIA, dead, 344 days
12.8
TCGA-MI-A75E-01A
0 years, male, white, stage:Stage IIIC, alive, 507 days
12.7
TCGA-DD-AADL-01A
0 years, male, asian, stage:Stage I, alive, 636 days
12.6
TCGA-UB-A7MC-01A
0 years, male, white, stage:Stage IIIA, alive, 500 days
12.5
TCGA-LG-A6GG-01A
0 years, female, white, stage:Stage II, alive, 387 days
12.5
TCGA-CC-A5UD-01A
0 years, male, asian, stage:Stage IIIA, dead, 304 days
12.5
TCGA-DD-A1EL-01A
0 years, male, black or african american, stage:Stage II, dead, 415 days
12.4
TCGA-DD-AACT-01A
0 years, female, asian, stage:Stage I, alive, 1562 days
12.3
TCGA-T1-A6J8-01A
0 years, male, white, stage:'--, alive, 23 days
12.3
TCGA-ED-A8O6-01A
0 years, female, asian, stage:Stage IIIA, dead, 56 days
12.3
TCGA-EP-A2KC-01A
0 years, male, black or african american, stage:Stage I, dead, 19 days
12.2
TCGA-K7-A6G5-01A
0 years, male, white, stage:Stage I, alive, 512 days
12.1
TCGA-GJ-A6C0-01A
0 years, female, white, stage:Stage II, dead, 31 days
12.1
TCGA-BC-A3KF-01A
0 years, female, white, stage:Stage I, alive, 8 days
12.0
TCGA-G3-A5SM-01A
0 years, male, white, stage:Stage II, alive, 520 days
11.9
TCGA-UB-A7MD-01A
0 years, male, black or african american, stage:Stage I, dead, 52 days
11.8
TCGA-CC-A5UC-01A
0 years, male, asian, stage:Stage IIIA, dead, 347 days
11.8
TCGA-DD-AACQ-01A
0 years, male, asian, stage:Stage II, dead, 432 days
11.4
TCGA-XR-A8TD-01A
0 years, female, white, stage:Stage IIIB, alive, 1030 days
11.3
TCGA-DD-A1EA-01A
0 years, male, asian, stage:Stage II, alive, 2415 days
11.3
TCGA-DD-A4ND-01A
0 years, female, white, stage:Stage I, alive, 2746 days
11.2
TCGA-RC-A7SH-01A
0 years, male, asian, stage:Stage II, alive, 468 days
11.2
TCGA-DD-AACY-01A
0 years, male, asian, stage:Stage I, alive, 1450 days
11.1
TCGA-FV-A4ZQ-01A
0 years, male, white, stage:Stage I, alive, 12 days
11.0
TCGA-G3-AAV3-01A
0 years, female, white, stage:Stage II, alive, 412 days
11.0
TCGA-DD-A4NV-01A
0 years, male, white, stage:Stage IIIA, alive, 2398 days
11.0
TCGA-ZP-A9D4-01A
0 years, female, white, stage:'--, alive, 395 days
10.9
TCGA-FV-A2QQ-01A
0 years, male, white, stage:Stage I, alive, 729 days
10.9
TCGA-G3-AAV1-01A
0 years, male, asian, stage:Stage IIIC, dead, 359 days
10.8
TCGA-QA-A7B7-01A
0 years, male, black or african american, stage:Stage II, alive, 94 days
10.8
TCGA-ED-A82E-01A
0 years, female, asian, stage:Stage IIIA, alive, 408 days
10.8
TCGA-G3-A5SL-01A
0 years, male, white, stage:Stage II, alive, 621 days
10.7
TCGA-BC-A10Q-01A
0 years, female, white, stage:'--, dead, 1135 days
10.7
TCGA-ED-A4XI-01A
0 years, male, asian, stage:Stage II, alive, 819 days
10.7
TCGA-DD-AACU-01A
0 years, male, asian, stage:Stage I, alive, 1567 days
10.7
TCGA-WX-AA44-01A
0 years, female, white, stage:Stage I, alive, 615 days
10.7
TCGA-DD-A73A-01A
0 years, male, white, stage:Stage I, alive, 728 days
10.6
TCGA-DD-AACP-01A
0 years, male, asian, stage:Stage I, alive, 415 days
10.5
TCGA-DD-AACA-01A
0 years, male, asian, stage:Stage I, alive, 2301 days
10.5
TCGA-BD-A3ER-01A
0 years, male, white, stage:Stage II, alive, 1115 days
10.4
TCGA-CC-A8HV-01A
0 years, female, asian, stage:Stage II, dead, 279 days
10.4
TCGA-DD-A4NN-01A
0 years, female, white, stage:Stage I, dead, 899 days
10.3
TCGA-DD-A1EC-01A
0 years, female, white, stage:Stage I, alive, 602 days
10.3
TCGA-G3-A7M7-01A
0 years, male, white, stage:Stage I, alive, 361 days
10.3
TCGA-BC-A10Z-01A
0 years, female, white, stage:Stage I, dead, 34 days
10.2
TCGA-DD-A4NB-01A
0 years, male, white, stage:Stage I, alive, 989 days
10.1
TCGA-DD-A73F-01A
0 years, female, white, stage:Stage I, alive, 1085 days
10.1
TCGA-DD-AAC8-01A
0 years, male, asian, stage:Stage I, dead, 16 days
10.0
TCGA-DD-AAE6-01A
0 years, female, asian, stage:Stage I, alive, 141 days
9.8
TCGA-2Y-A9H8-01A
0 years, female, white, stage:'--, dead, 633 days
9.7
TCGA-YA-A8S7-01A
0 years, male, white, stage:Stage IIIA, dead, 412 days
9.5
TCGA-3K-AAZ8-01A
0 years, male, black or african american, stage:Stage IIIB, alive, 396 days
9.5
TCGA-EP-A12J-01A
0 years, male, black or african american, stage:Stage I, alive, 570 days
9.4
TCGA-HP-A5N0-01A
0 years, female, stage:'--, dead, 752 days
9.4
TCGA-KR-A7K8-01A
0 years, male, stage:Stage I, alive, 906 days
9.3
TCGA-XR-A8TG-01A
0 years, male, white, stage:Stage I, alive, 898 days
9.3
TCGA-G3-AAV6-01A
0 years, female, white, stage:Stage IIIA, dead, 65 days
9.3
TCGA-DD-A73C-01A
0 years, female, white, stage:Stage IIIA, alive, 701 days
9.3
TCGA-G3-A25Z-01A
0 years, male, asian, stage:Stage I, alive, 655 days
9.2
TCGA-CC-5260-01A
0 years, female, asian, stage:Stage IIIC, dead, 87 days
9.2
TCGA-G3-A5SI-01A
0 years, male, asian, stage:Stage II, dead, 768 days
9.2
TCGA-CC-A1HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 101 days
9.1
TCGA-DD-A4NK-01A
0 years, female, white, stage:Stage IIIA, dead, 1210 days
9.0
TCGA-EP-A26S-01A
0 years, male, white, stage:Stage I, alive, 608 days
8.9
TCGA-DD-A73B-01A
0 years, female, white, stage:Stage I, dead, 283 days
8.9
TCGA-K7-AAU7-01A
0 years, male, white, stage:Stage II, alive, 359 days
8.9
TCGA-DD-A1EB-01A
0 years, female, stage:Stage I, alive, 2017 days
8.9
TCGA-HP-A5MZ-01A
0 years, male, stage:Stage I, dead, 91 days
8.9
TCGA-CC-A7IH-01A
0 years, male, asian, stage:Stage IIIA, alive, 365 days
8.9
TCGA-BC-A3KG-01A
0 years, female, white, stage:Stage II, alive, 680 days
8.9
TCGA-DD-AAEA-01A
0 years, male, asian, stage:Stage I, alive, 575 days
8.8
TCGA-MR-A520-01A
0 years, male, white, stage:Stage I, alive, 229 days
8.8
TCGA-2Y-A9H0-01A
0 years, male, white, stage:Stage IIIA, alive, 3675 days
8.8
TCGA-DD-AADV-01A
0 years, male, asian, stage:Stage I, alive, 574 days
8.6
TCGA-DD-AAVY-01A
0 years, male, asian, stage:Stage IIIA, alive, 1970 days
8.6
TCGA-DD-A11B-01A
0 years, male, white, stage:Stage I, dead, 14 days
8.6
TCGA-2Y-A9GZ-01A
0 years, female, white, stage:Stage II, dead, 848 days
8.5
TCGA-RC-A6M5-01A
0 years, female, white, stage:Stage IVA, alive, 15 days
8.5
TCGA-G3-A5SJ-01A
0 years, male, white, stage:Stage I, alive, 698 days
8.4
TCGA-DD-AA3A-01A
0 years, female, white, stage:Stage I, dead, 410 days
8.4
TCGA-DD-A4NS-01A
0 years, female, white, stage:Stage I, dead, 2456 days
8.2
TCGA-BD-A3EP-01A
0 years, female, black or african american, stage:Stage I, alive, 409 days
8.2
TCGA-2Y-A9GY-01A
0 years, female, white, stage:Stage II, dead, 757 days
8.1
TCGA-DD-AADG-01A
0 years, male, asian, stage:Stage IIIA, alive, 1145 days
8.1
TCGA-DD-A4NF-01A
0 years, male, white, stage:Stage I, alive, 942 days
8.0
TCGA-DD-AAVP-01A
0 years, male, asian, stage:Stage I, alive, 2752 days
7.9
TCGA-DD-AAE1-01A
0 years, male, asian, stage:Stage I, alive, 552 days
7.9
TCGA-PD-A5DF-01A
0 years, female, white, stage:Stage IIIB, dead, 639 days
7.7
TCGA-MI-A75C-01A
0 years, male, white, stage:Stage I, alive, 291 days
7.6
TCGA-4R-AA8I-01A
0 years, male, white, stage:Stage II, dead, 262 days
7.6
TCGA-ZS-A9CG-01A
0 years, male, white, stage:Stage II, alive, 341 days
7.5
TCGA-EP-A3JL-01A
0 years, male, white, stage:Stage I, alive, 303 days
7.5
TCGA-G3-A7M8-01A
0 years, male, asian, stage:Stage I, alive, 430 days
7.4
TCGA-CC-A7IL-01A
0 years, male, asian, stage:Stage IIIA, dead, 278 days
7.4
TCGA-BC-A10Y-01A
0 years, male, white, stage:'--, dead, 711 days
7.3
TCGA-UB-A7ME-01A
0 years, male, asian, stage:Stage I, alive, 486 days
7.3
TCGA-ZS-A9CF-01A
0 years, male, white, stage:Stage II, alive, 2412 days
7.3
TCGA-RC-A7SB-01A
0 years, male, asian, stage:Stage II, alive, 588 days
7.3
TCGA-BC-A217-01A
0 years, female, white, stage:Stage II, dead, 1397 days
7.1
TCGA-DD-A4NI-01A
0 years, male, white, stage:Stage II, alive, 816 days
7.1
TCGA-G3-A25S-01A
0 years, male, white, stage:Stage I, dead, 416 days
7.0
TCGA-DD-AACL-01A
0 years, female, asian, stage:Stage I, dead, 107 days
6.9
TCGA-DD-A1EK-01A
0 years, female, white, stage:Stage IVB, dead, 558 days
6.9
TCGA-ED-A459-01A
0 years, male, asian, stage:Stage II, alive, 910 days
6.9
TCGA-K7-A5RG-01A
0 years, male, black or african american, stage:Stage I, alive, 519 days
6.8
TCGA-EP-A3RK-01A
0 years, male, white, stage:Stage IIIA, alive, 363 days
6.8
TCGA-DD-AAVQ-01A
0 years, male, asian, stage:Stage I, alive, 2728 days
6.8
TCGA-ED-A97K-01A
0 years, male, asian, stage:Stage IIIA, alive, 6 days
6.7
TCGA-DD-A4NG-01A
0 years, male, white, stage:Stage IIIA, dead, 802 days
6.7
TCGA-ED-A8O5-01A
0 years, female, asian, stage:Stage IIIA, alive, 406 days
6.7
TCGA-G3-A3CH-01A
0 years, male, asian, stage:Stage IIIA, alive, 780 days
6.7
TCGA-DD-AACJ-01A
0 years, male, asian, stage:Stage II, alive, 2102 days
6.6
TCGA-RG-A7D4-01A
0 years, male, black or african american, stage:Stage II, alive, 1098 days
6.5
TCGA-CC-A7IJ-01A
0 years, male, asian, stage:Stage II, alive, 382 days
6.4
TCGA-DD-A4NA-01A
0 years, female, white, stage:Stage IIIC, alive, 1008 days
6.4
TCGA-ED-A627-01A
0 years, male, white, stage:Stage I, alive, 423 days
6.3
TCGA-DD-AACV-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
6.3
TCGA-DD-AADP-01A
0 years, male, asian, stage:Stage I, alive, 458 days
6.3
TCGA-DD-A3A1-01A
0 years, male, stage:Stage IIIA, dead, 233 days
6.3
TCGA-CC-A3M9-01A
0 years, male, asian, stage:Stage IIIA, dead, 300 days
6.2
TCGA-DD-A3A3-01A
0 years, male, asian, stage:Stage I, dead, 535 days
6.2
TCGA-MI-A75G-01A
0 years, male, white, stage:Stage II, alive, 698 days
6.1
TCGA-DD-AAEE-01A
0 years, male, asian, stage:Stage I, alive, 810 days
6.1
TCGA-EP-A2KA-01A
0 years, female, white, stage:Stage IIIA, dead, 627 days
6.1
TCGA-BC-A5W4-01A
0 years, male, white, stage:Stage IIIA, dead, 547 days
6.0
TCGA-DD-A115-01A
0 years, male, white, stage:Stage IIIA, dead, 2542 days
6.0
TCGA-G3-A6UC-01A
0 years, male, white, stage:Stage IIIB, alive, 671 days
5.9
TCGA-5R-AA1D-01A
0 years, female, white, stage:Stage IIIA, alive, 449 days
5.9
TCGA-DD-AAD8-01A
0 years, female, asian, stage:Stage I, alive, 1219 days
5.9
TCGA-DD-A3A2-01A
0 years, female, white, stage:Stage I, dead, 2131 days
5.8
TCGA-G3-A25V-01A
0 years, male, white, stage:Stage I, alive, 860 days
5.8
TCGA-CC-A9FS-01A
0 years, male, asian, stage:Stage II, alive, 211 days
5.8
TCGA-DD-A39Z-01A
0 years, female, stage:Stage II, dead, 601 days
5.8
TCGA-5R-AAAM-01A
0 years, female, white, stage:Stage II, dead, 46 days
5.7
TCGA-DD-AAW1-01A
0 years, male, asian, stage:Stage IIIA, alive, 1989 days
5.7
TCGA-CC-A7IG-01A
0 years, male, asian, stage:Stage II, dead, 299 days
5.7
TCGA-G3-A3CI-01A
0 years, male, white, stage:Stage I, alive, 180 days
5.7
TCGA-ZS-A9CE-01A
0 years, female, white, stage:Stage II, alive, 1241 days
5.6
TCGA-KR-A7K0-01A
0 years, male, white, stage:Stage I, dead, 65 days
5.4
TCGA-DD-AAE2-01A
0 years, male, asian, stage:Stage I, alive, 638 days
5.3
TCGA-ZP-A9CY-01A
0 years, female, white, stage:'--, alive, 782 days
5.2
TCGA-2Y-A9GT-01A
0 years, male, white, stage:Stage I, dead, 1624 days
5.1
TCGA-ES-A2HT-01A
0 years, male, black or african american, stage:Stage I, dead, 438 days
5.0
TCGA-DD-AAE7-01A
0 years, male, asian, stage:Stage I, alive, 644 days
5.0
TCGA-DD-AAE9-01A
0 years, male, asian, stage:Stage I, alive, 722 days
5.0
TCGA-K7-A5RF-01A
0 years, male, white, stage:Stage I, alive, 631 days
5.0
TCGA-DD-A3A8-01A
0 years, male, white, stage:Stage II, dead, 11 days
5.0
TCGA-2Y-A9H2-01A
0 years, female, white, stage:Stage I, alive, 1731 days
5.0
TCGA-DD-AAVU-01A
0 years, male, asian, stage:Stage II, alive, 2202 days
4.9
TCGA-BD-A2L6-01A
0 years, male, white, stage:'--, alive, 1363 days
4.8
TCGA-DD-A1ED-01A
0 years, male, white, stage:Stage I, alive, 2301 days
4.8
TCGA-DD-AAEI-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
4.8
TCGA-G3-AAV2-01A
0 years, male, white, stage:Stage I, alive, 372 days
4.7
TCGA-2Y-A9GV-01A
0 years, female, white, stage:Stage I, dead, 2532 days
4.6
TCGA-ED-A7XO-01A
0 years, male, asian, stage:Stage IIIA, alive, 427 days
4.6
TCGA-DD-AAC9-01A
0 years, male, asian, stage:Stage I, alive, 347 days
4.6
TCGA-DD-AACC-01A
0 years, male, asian, stage:Stage I, dead, 1685 days
4.4
TCGA-RC-A7S9-01A
0 years, female, asian, stage:Stage I, alive, 640 days
4.4
TCGA-DD-AAVR-01A
0 years, male, asian, stage:Stage I, alive, 2513 days
4.3
TCGA-DD-AACF-01A
0 years, male, asian, stage:Stage I, dead, 365 days
4.3
TCGA-DD-AAD5-01A
0 years, male, asian, stage:Stage I, alive, 1345 days
4.3
TCGA-XR-A8TF-01A
0 years, male, white, stage:Stage I, dead, 693 days
4.2
TCGA-DD-AAVX-01A
0 years, male, asian, stage:Stage II, alive, 1718 days
4.2
TCGA-DD-AACB-01A
0 years, female, asian, stage:Stage I, alive, 2324 days
4.1
TCGA-CC-A7IF-01A
0 years, male, asian, stage:Stage IIIA, dead, 649 days
4.0
TCGA-DD-AAEH-01A
0 years, male, asian, stage:Stage I, alive, 784 days
4.0
TCGA-WQ-A9G7-01A
0 years, female, white, stage:'--, alive, 30 days
4.0
TCGA-UB-AA0V-01A
0 years, female, white, stage:Stage I, alive, 314 days
4.0
TCGA-RC-A6M4-01A
0 years, female, white, stage:Stage IIIA, alive, 22 days
3.9
TCGA-DD-AADJ-01A
0 years, female, asian, stage:Stage I, alive, 1066 days
3.8
TCGA-DD-A11C-01A
0 years, male, white, stage:Stage I, alive, 662 days
3.8
TCGA-BC-A69H-01A
0 years, male, white, stage:Stage II, alive, 444 days
3.7
TCGA-CC-A7IE-01A
0 years, male, asian, stage:Stage IIIA, dead, 217 days
3.6
TCGA-ED-A7PZ-01A
0 years, male, asian, stage:Stage II, alive, 6 days
3.5
TCGA-BC-A10X-01A
0 years, female, white, stage:Stage IIIA, dead, 770 days
3.5
TCGA-FV-A3I0-01A
0 years, female, white, stage:Stage II, alive, 848 days
3.4
TCGA-BC-A10S-01A
0 years, male, white, stage:'--, dead, 1423 days
3.4
TCGA-BC-A69I-01A
0 years, male, white, stage:Stage I, alive, 387 days
3.3
TCGA-WX-AA47-01A
0 years, female, white, stage:Stage IIIA, dead, 556 days
3.2
TCGA-DD-AADF-01A
0 years, female, asian, stage:Stage I, dead, 115 days
3.2
TCGA-BC-A10T-01A
0 years, male, white, stage:'--, dead, 837 days
3.1
TCGA-RC-A7SF-01A
0 years, male, asian, stage:Stage I, alive, 579 days
3.0
TCGA-DD-AAD6-01A
0 years, male, asian, stage:Stage IIIA, alive, 672 days
2.9
TCGA-2Y-A9H4-01A
0 years, male, black or african american, stage:Stage I, alive, 1452 days
2.9
TCGA-NI-A8LF-01A
0 years, male, white, stage:Stage I, alive, 799 days
2.9
TCGA-DD-A4NL-01A
0 years, male, white, stage:Stage I, alive, 1711 days
2.9
TCGA-G3-A5SK-01A
0 years, male, white, stage:Stage I, alive, 744 days
2.8
TCGA-DD-AAE0-01A
0 years, female, asian, stage:Stage IIIA, alive, 555 days
2.7
TCGA-BC-A110-01A
0 years, female, black or african american, stage:'--, dead, 2116 days
2.6
TCGA-2Y-A9H3-01A
0 years, male, white, stage:Stage II, alive, 1516 days
2.6
TCGA-DD-A3A9-01A
0 years, female, white, stage:Stage IVB, dead, 931 days
2.6
TCGA-LG-A9QD-01A
0 years, male, white, stage:Stage IIIA, alive, 366 days
2.6
TCGA-G3-A25X-01A
0 years, male, asian, stage:Stage II, alive, 1779 days
2.6
TCGA-MI-A75H-01A
0 years, male, white, stage:'--, alive, 747 days
2.5
TCGA-CC-A7II-01A
0 years, male, asian, stage:Stage IIIA, alive, 399 days
2.5
TCGA-BW-A5NO-01A
0 years, male, black or african american, stage:Stage IIIA, alive, 20 days
2.5
TCGA-FV-A4ZP-01A
0 years, male, white, stage:Stage IIIA, dead, 2486 days
2.5
TCGA-DD-AADR-01A
0 years, male, asian, stage:Stage I, alive, 2028 days
2.5
TCGA-G3-AAV0-01A
0 years, male, asian, stage:Stage I, alive, 476 days
2.4
TCGA-G3-A25T-01A
0 years, female, white, stage:Stage IIIA, alive, 1553 days
2.4
TCGA-NI-A4U2-01A
0 years, male, white, stage:Stage IIIA, dead, 1791 days
2.3
TCGA-DD-AADM-01A
0 years, male, asian, stage:Stage II, dead, 12 days
2.3
TCGA-ED-A7PY-01A
0 years, female, asian, stage:Stage II, alive, 390 days
2.3
TCGA-DD-A116-01A
0 years, male, asian, stage:Stage IIIA, dead, 1622 days
2.2
TCGA-DD-A4NP-01A
0 years, male, white, stage:Stage I, alive, 3308 days
2.1
TCGA-MR-A8JO-01A
0 years, male, white, stage:Stage I, alive, 330 days
2.1
TCGA-DD-AAW2-01A
0 years, male, asian, stage:Stage I, alive, 1855 days
2.1
TCGA-FV-A495-01A
0 years, female, white, stage:Stage II, alive, 1 days
2.1
TCGA-G3-A7M5-01A
0 years, male, asian, stage:Stage I, alive, 447 days
2.1
TCGA-DD-A3A5-01A
0 years, female, white, stage:Stage III, dead, 3125 days
2.0
TCGA-5C-AAPD-01A
0 years, male, asian, stage:Stage II, alive, 20 days
2.0
TCGA-DD-AADU-01A
0 years, male, asian, stage:Stage II, alive, 554 days
1.8
TCGA-DD-AADO-01A
0 years, male, asian, stage:Stage I, alive, 453 days
1.8
TCGA-KR-A7K2-01A
0 years, male, white, stage:Stage I, alive, 829 days
1.7
TCGA-DD-AAED-01A
0 years, male, asian, stage:Stage I, alive, 763 days
1.7
TCGA-DD-AADI-01A
0 years, female, asian, stage:Stage I, alive, 1085 days
1.7
TCGA-WX-AA46-01A
0 years, male, white, stage:Stage II, alive, 756 days
1.6
TCGA-G3-AAUZ-01A
0 years, male, stage:Stage I, alive, 480 days
1.5
TCGA-DD-AADA-01A
0 years, female, asian, stage:Stage I, alive, 1233 days
1.3
TCGA-DD-A3A6-01A
0 years, female, white, stage:Stage II, dead, 3258 days
1.2
TCGA-DD-A119-01A
0 years, male, asian, stage:Stage IV, dead, 223 days
1.1
TCGA-DD-AACI-01A
0 years, male, asian, stage:Stage II, alive, 1618 days
1.1
TCGA-DD-AACO-01A
0 years, male, asian, stage:Stage I, alive, 1876 days
1.1
TCGA-DD-AADQ-01A
0 years, male, asian, stage:Stage II, alive, 436 days
1.0
TCGA-KR-A7K7-01A
0 years, female, white, stage:Stage II, alive, 951 days
0.9
TCGA-DD-A39V-01A
0 years, male, white, stage:Stage II, dead, 643 days
0.9
TCGA-DD-AAE3-01A
0 years, male, asian, stage:Stage I, alive, 566 days
0.8
TCGA-ES-A2HS-01A
0 years, male, white, stage:Stage I, dead, 688 days
0.8
TCGA-G3-A3CJ-01A
0 years, male, american indian or alaska native, stage:Stage II, alive, 594 days
0.8
TCGA-2Y-A9H1-01A
0 years, male, white, stage:Stage I, dead, 1229 days
0.8
TCGA-DD-AACG-01A
0 years, male, asian, stage:Stage II, dead, 469 days
0.8
TCGA-DD-AADN-01A
0 years, male, asian, stage:Stage I, alive, 898 days
0.7
TCGA-WQ-AB4B-01A
0 years, male, white, stage:Stage II, alive, 395 days
0.7
TCGA-DD-A73G-01A
0 years, female, white, stage:Stage I, alive, 3478 days
0.6
TCGA-DD-AAEB-01A
0 years, male, asian, stage:Stage I, alive, 478 days
0.6
TCGA-DD-A3A7-01A
0 years, male, stage:Stage IIIB, dead, 419 days
0.5
TCGA-DD-AADS-01A
0 years, male, asian, stage:Stage I, alive, 474 days
0.4
TCGA-DD-AACD-01A
0 years, male, asian, stage:Stage I, dead, 381 days
0.3
TCGA-CC-5259-01A
0 years, female, asian, stage:Stage IIIC, alive, 250 days
0.1
TCGA-DD-AAE4-01A
0 years, female, asian, stage:Stage I, alive, 608 days
0.0
TCGA-CC-A123-01A
0 years, female, asian, stage:Stage IIIA, alive, 219 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
TOMM40L is not prognostic in Liver Hepatocellular Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
27.4
Number of samples
231
Samples
Sample
Description
TPM
DO50814
0 years, male, NA, stage:3, alive, 420 days
141.3
DO23532
0 years, female, NA, stage:1, alive, 960 days
113.8
DO23511
0 years, female, NA, stage:3, dead, 180 days
83.2
DO23534
0 years, male, NA, stage:2, alive, 840 days
81.9
DO45209
0 years, male, NA, stage:4, alive, 1350 days
81.1
DO45107
0 years, female, NA, stage:2, alive, 1710 days
78.3
DO50839
0 years, female, NA, stage:3, alive, 330 days
77.7
DO45125
0 years, male, NA, stage:3, alive, 1680 days
70.5
DO23512
0 years, male, NA, stage:1, alive, 1260 days
64.1
DO23508
0 years, female, NA, stage:2, alive, 390 days
63.7
DO50817
0 years, male, NA, stage:2, alive, 390 days
63.5
DO45179
0 years, female, NA, stage:2, alive, 600 days
59.4
DO23548
0 years, female, NA, stage:1, alive, 840 days
58.9
DO50845
0 years, male, NA, stage:3, alive, 210 days
56.5
DO23545
0 years, male, NA, stage:2, dead, 570 days
56.3
DO50816
0 years, male, NA, stage:2, alive, 390 days
54.7
DO23546
0 years, male, NA, stage:2, alive, 1050 days
53.3
DO45092
0 years, male, NA, stage:4, dead, 1200 days
51.7
DO23543
0 years, male, NA, stage:2, alive, 1020 days
50.8
DO50809
0 years, male, NA, stage:3, dead, 720 days
49.5
DO45193
0 years, female, NA, stage:4, dead, 120 days
49.3
DO45253
0 years, male, NA, stage:2, alive, 870 days
48.8
DO48759
0 years, male, NA, stage:3, alive, 720 days
47.1
DO45281
0 years, male, NA, stage:4, alive, 750 days
46.2
DO50813
0 years, male, NA, stage:2, alive, 420 days
44.7
DO45261
0 years, male, NA, stage:3, alive, 990 days
44.5
DO45103
0 years, male, NA, stage:3, alive, 450 days
43.8
DO45149
0 years, female, NA, stage:2, alive, 1260 days
43.7
DO50783
0 years, male, NA, stage:3, alive, 480 days
43.2
DO45201
0 years, male, NA, stage:1, alive, 900 days
43.0
DO23528
0 years, female, NA, stage:2, alive, 1020 days
43.0
DO45123
0 years, female, NA, stage:2, dead, 570 days
42.7
DO45101
0 years, male, NA, stage:2, alive, 1680 days
42.7
DO45097
0 years, male, NA, stage:3, alive, 1620 days
42.7
DO50776
0 years, male, NA, stage:1, alive, 690 days
41.9
DO50825
0 years, male, NA, stage:2, alive, 390 days
40.9
DO23536
0 years, male, NA, stage:2, alive, 930 days
40.8
DO23539
0 years, male, NA, stage:1, alive, 1110 days
40.6
DO50818
0 years, male, NA, stage:2, alive, 510 days
40.0
DO23509
0 years, male, NA, stage:3, dead, 780 days
39.6
DO45199
0 years, female, NA, stage:2, alive, 1350 days
39.5
DO23540
0 years, male, NA, stage:1, alive, 750 days
38.5
DO50807
0 years, male, NA, stage:1, alive, 540 days
38.3
DO45141
0 years, male, NA, stage:2, alive, 1320 days
38.0
DO45215
0 years, male, NA, stage:2, alive, 1170 days
38.0
DO45255
0 years, male, NA, stage:3, alive, 720 days
37.9
DO48737
0 years, male, NA, stage:1, alive, 720 days
37.8
DO45117
0 years, female, NA, stage:2, dead, 1110 days
37.4
DO23533
0 years, male, NA, stage:2, alive, 900 days
37.3
DO227643
0 years, male, NA, stage:2, alive, 1260 days
35.6
DO45167
0 years, male, NA, stage:2, dead, 1440 days
35.4
DO50804
0 years, male, NA, stage:2, alive, 720 days
34.7
DO45175
0 years, male, NA, stage:2, alive, 1140 days
34.5
DO45241
0 years, male, NA, stage:1, alive, 1080 days
33.7
DO23524
0 years, female, NA, stage:2, alive, 1050 days
33.7
DO50811
0 years, male, NA, stage:1, alive, 450 days
33.2
DO50855
0 years, male, NA, stage:2, alive, 570 days
33.2
DO45197
0 years, male, NA, stage:2, alive, 1170 days
32.6
DO45237
0 years, male, NA, stage:2, alive, 900 days
32.6
DO45131
0 years, male, NA, stage:4, dead, 360 days
32.5
DO45227
0 years, female, NA, stage:2, alive, 1020 days
32.2
DO50806
0 years, male, NA, stage:4, alive, 540 days
31.9
DO45163
0 years, male, NA, stage:2, alive, 960 days
31.4
DO48700
0 years, female, NA, stage:2, alive, 810 days
31.2
DO45094
0 years, male, NA, stage:3, alive, 1650 days
31.1
DO48677
0 years, male, NA, stage:3, alive, 1140 days
31.1
DO48751
0 years, male, NA, stage:2, dead, 480 days
30.9
DO50820
0 years, female, NA, stage:3, alive, 510 days
30.9
DO45225
0 years, male, NA, stage:1, alive, 1050 days
30.6
DO45121
0 years, male, NA, stage:3, alive, 1530 days
30.4
DO45273
0 years, male, NA, stage:2, alive, 480 days
30.4
DO48693
0 years, male, NA, stage:2, alive, 900 days
30.2
DO45153
0 years, female, NA, stage:2, alive, 1380 days
30.1
DO45207
0 years, male, NA, stage:1, alive, 1050 days
29.7
DO48757
0 years, female, NA, stage:3, alive, 480 days
29.1
DO50857
0 years, male, NA, stage:2, alive, 210 days
29.0
DO45115
0 years, male, NA, stage:2, alive, 840 days
28.8
DO50802
0 years, male, NA, stage:2, alive, 930 days
28.8
DO48674
0 years, male, NA, stage:2, alive, 1260 days
28.7
DO45229
0 years, male, NA, stage:1, alive, 990 days
28.3
DO45203
0 years, female, NA, stage:2, alive, 1170 days
28.1
DO45173
0 years, male, NA, stage:3, alive, 1170 days
28.1
DO48723
0 years, male, NA, stage:1, alive, 600 days
28.0
DO50787
0 years, male, NA, stage:3, alive, 480 days
27.9
DO48743
0 years, female, NA, stage:2, alive, 570 days
27.8
DO45257
0 years, male, NA, stage:3, alive, 810 days
27.5
DO45096
0 years, male, NA, stage:2, dead, 1290 days
27.5
DO50798
0 years, male, NA, stage:3, dead, 30 days
27.5
DO45105
0 years, male, NA, stage:1, alive, 1680 days
27.3
DO50785
0 years, male, NA, stage:4, dead, 90 days
27.1
DO23549
0 years, male, NA, stage:3, alive, 990 days
26.9
DO50829
0 years, male, NA, stage:3, alive, 570 days
26.6
DO23526
0 years, male, NA, stage:3, alive, 1050 days
26.6
DO45159
0 years, male, NA, stage:3, alive, 1470 days
26.4
DO50844
0 years, male, NA, stage:4, alive, 300 days
26.3
DO45119
0 years, male, NA, stage:3, dead, 510 days
26.1
DO48747
0 years, male, NA, stage:3, alive, 540 days
26.0
DO23527
0 years, male, NA, stage:1, alive, 1050 days
25.9
DO45113
0 years, male, NA, stage:3, alive, 1560 days
25.8
DO48695
0 years, male, NA, stage:2, alive, 720 days
25.8
DO48704
0 years, female, NA, stage:3, alive, 750 days
25.8
DO45187
0 years, female, NA, stage:1, alive, 1260 days
25.7
DO48746
0 years, male, NA, stage:3, alive, 570 days
25.4
DO45235
0 years, female, NA, stage:1, alive, 900 days
25.2
DO48706
0 years, male, NA, stage:2, alive, 870 days
25.1
DO48727
0 years, female, NA, stage:2, dead, 390 days
25.0
DO50791
0 years, female, NA, stage:1, dead, 480 days
24.5
DO45143
0 years, male, NA, stage:3, alive, 1290 days
24.2
DO45091
0 years, male, NA, stage:2, dead, 1320 days
24.1
DO23518
0 years, male, NA, stage:2, alive, 1320 days
24.0
DO45133
0 years, male, NA, stage:3, dead, 660 days
23.8
DO23521
0 years, male, NA, stage:3, alive, 1110 days
23.7
DO45171
0 years, male, NA, stage:3, alive, 600 days
23.7
DO48701
0 years, male, NA, stage:2, alive, 780 days
23.5
DO23525
0 years, male, NA, stage:4, alive, 1050 days
23.5
DO23513
0 years, male, NA, stage:3, alive, 1200 days
23.5
DO45239
0 years, male, NA, stage:2, alive, 870 days
23.5
DO45267
0 years, male, NA, stage:3, dead, 570 days
23.4
DO45219
0 years, male, NA, stage:2, alive, 1080 days
23.3
DO50799
0 years, female, NA, stage:2, alive, 540 days
23.2
DO50840
0 years, male, NA, stage:2, alive, 330 days
23.1
DO45177
0 years, female, NA, stage:3, alive, 1260 days
23.1
DO48697
0 years, female, NA, stage:2, dead, 810 days
22.9
DO48717
0 years, male, NA, stage:4, dead, 180 days
22.8
DO50793
0 years, male, NA, stage:4, alive, 540 days
22.3
DO23529
0 years, male, NA, stage:4, alive, 930 days
22.2
DO50822
0 years, male, NA, stage:2, alive, 510 days
22.0
DO45161
0 years, male, NA, stage:2, dead, 540 days
21.9
DO45165
0 years, male, NA, stage:2, alive, 690 days
21.9
DO50778
0 years, male, NA, stage:4, alive, 630 days
21.7
DO45265
0 years, male, NA, stage:3, alive, 1020 days
21.7
DO50819
0 years, female, NA, stage:2, alive, 510 days
21.5
DO48725
0 years, male, NA, stage:1, alive, 780 days
21.3
DO45129
0 years, male, NA, stage:3, alive, 1470 days
21.3
DO45205
0 years, female, NA, stage:2, dead, 90 days
21.1
DO45275
0 years, male, NA, stage:3, dead, 10 days
21.1
DO45213
0 years, male, NA, stage:1, alive, 1200 days
21.0
DO45223
0 years, male, NA, stage:4, alive, 1020 days
21.0
DO45095
0 years, male, NA, stage:2, alive, 1620 days
21.0
DO23510
0 years, female, NA, stage:2, alive, 870 days
21.0
DO50808
0 years, male, NA, stage:2, alive, 570 days
20.8
DO48681
0 years, male, NA, stage:2, alive, 900 days
20.7
DO23515
0 years, male, NA, stage:2, alive, 1230 days
20.1
DO50789
0 years, female, NA, stage:2, alive, 570 days
19.6
DO23544
0 years, male, NA, stage:2, alive, 960 days
19.6
DO48760
0 years, female, NA, stage:2, alive, 690 days
19.4
DO48733
0 years, male, NA, stage:2, alive, 600 days
19.3
DO48721
0 years, female, NA, stage:1, alive, 900 days
19.2
DO23537
0 years, male, NA, stage:2, dead, 900 days
19.2
DO23516
0 years, male, NA, stage:3, dead, 20 days
19.1
DO45185
0 years, male, NA, stage:2, alive, 600 days
19.0
DO45139
0 years, male, NA, stage:3, alive, 1320 days
18.8
DO48730
0 years, female, NA, stage:2, alive, 630 days
18.7
DO45269
0 years, male, NA, stage:3, alive, 750 days
18.6
DO45137
0 years, male, NA, stage:1, alive, 1320 days
18.5
DO45221
0 years, female, NA, stage:4, dead, 390 days
18.5
DO48672
0 years, male, NA, stage:2, alive, 450 days
18.2
DO48715
0 years, female, NA, stage:2, dead, 690 days
18.2
DO48719
0 years, male, NA, stage:2, alive, 690 days
17.9
DO50850
0 years, male, NA, stage:3, alive, 720 days
17.9
DO45181
0 years, female, NA, stage:2, alive, 1200 days
17.9
DO50832
0 years, male, NA, stage:3, alive, 90 days
17.8
DO48682
0 years, female, NA, stage:3, dead, 120 days
17.7
DO45247
0 years, female, NA, stage:2, alive, 210 days
17.6
DO45111
0 years, male, NA, stage:2, alive, 1590 days
17.5
DO23550
0 years, male, NA, stage:1, alive, 990 days
17.3
DO45243
0 years, female, NA, stage:3, alive, 930 days
17.2
DO45183
0 years, female, NA, stage:2, dead, 570 days
17.1
DO45195
0 years, male, NA, stage:1, alive, 390 days
17.0
DO227801
0 years, female, NA, stage:1, alive, 660 days
17.0
DO48741
0 years, male, NA, stage:3, alive, 240 days
16.9
DO50805
0 years, male, NA, stage:2, alive, 690 days
16.8
DO45231
0 years, male, NA, stage:2, alive, 930 days
16.7
DO45145
0 years, male, NA, stage:3, dead, 60 days
16.7
DO45157
0 years, male, NA, stage:2, alive, 1980 days
16.6
DO48736
0 years, female, NA, stage:1, alive, 600 days
16.6
DO50800
0 years, male, NA, stage:2, alive, 510 days
16.3
DO50859
0 years, male, NA, stage:2, alive, 180 days
15.9
DO50803
0 years, female, NA, stage:1, alive, 540 days
15.9
DO23542
0 years, male, NA, stage:3, alive, 960 days
15.9
DO48712
0 years, male, NA, stage:2, alive, 810 days
15.5
DO48716
0 years, male, NA, stage:2, alive, 720 days
15.4
DO23538
0 years, male, NA, stage:2, alive, 450 days
15.2
DO23535
0 years, male, NA, stage:1, alive, 960 days
15.0
DO48720
0 years, female, NA, stage:2, alive, 570 days
15.0
DO23541
0 years, male, NA, stage:2, alive, 930 days
14.8
DO48742
0 years, male, NA, stage:2, alive, 600 days
14.7
DO23531
0 years, female, NA, stage:3, alive, 900 days
14.5
DO50815
0 years, male, NA, stage:3, alive, 150 days
14.5
DO23514
0 years, male, NA, stage:2, alive, 1290 days
14.5
DO45189
0 years, female, NA, stage:2, alive, 1200 days
14.3
DO45109
0 years, male, NA, stage:2, alive, 1590 days
14.2
DO45093
0 years, male, NA, stage:2, dead, 720 days
14.2
DO48679
0 years, male, NA, stage:2, alive, 1200 days
14.1
DO45135
0 years, male, NA, stage:1, alive, 1410 days
14.1
DO45099
0 years, male, NA, stage:3, alive, 1590 days
13.9
DO45169
0 years, male, NA, stage:3, alive, 1350 days
13.4
DO45155
0 years, male, NA, stage:2, alive, 2160 days
13.3
DO45299
0 years, female, NA, stage:1, alive, 1440 days
13.0
DO45301
0 years, male, NA, stage:2, dead, 1440 days
12.5
DO45127
0 years, male, NA, stage:3, dead, 420 days
12.5
DO23552
0 years, female, NA, stage:1, alive, 810 days
12.2
DO23530
0 years, male, NA, stage:4, dead, 180 days
11.5
DO45217
0 years, female, NA, stage:3, dead, 270 days
11.5
DO45263
0 years, male, NA, stage:3, dead, 270 days
11.3
DO23517
0 years, male, NA, stage:2, alive, 1200 days
11.2
DO45233
0 years, male, NA, stage:3, alive, 900 days
11.0
DO45259
0 years, male, NA, stage:3, alive, 330 days
11.0
DO45277
0 years, male, NA, stage:3, alive, 600 days
10.5
DO48732
0 years, male, NA, stage:3, alive, 630 days
10.2
DO23551
0 years, male, NA, stage:3, dead, 150 days
10.1
DO48761
0 years, male, NA, stage:2, alive, 870 days
9.8
DO45191
0 years, female, NA, stage:2, alive, 1200 days
9.4
DO45287
0 years, male, NA, stage:1, alive, 390 days
9.4
DO45307
0 years, female, NA, stage:4, dead, 240 days
9.3
DO45211
0 years, male, NA, stage:3, alive, 240 days
8.8
DO45251
0 years, female, NA, stage:2, alive, 900 days
8.6
DO48728
0 years, female, NA, stage:2, alive, 150 days
8.6
DO23547
0 years, male, NA, stage:1, alive, 1020 days
8.5
DO45283
0 years, male, NA, stage:3, alive, 510 days
8.2
DO45289
0 years, female, NA, stage:3, alive, 360 days
8.1
DO23519
0 years, male, NA, stage:3, alive, 630 days
8.0
DO23523
0 years, male, NA, stage:3, alive, 1080 days
7.7
DO45279
0 years, male, NA, stage:3, alive, 1290 days
7.7
DO45303
0 years, female, NA, stage:3, alive, 990 days
7.2
DO50774
0 years, female, NA, stage:2, alive, 720 days
7.2
DO45285
0 years, male, NA, stage:3, alive, 480 days
5.5
DO45245
0 years, female, NA, stage:2, dead, 240 days
5.0
DO45305
0 years, male, NA, stage:4, alive, 300 days
4.6
DO45249
0 years, male, NA, stage:1, alive, 630 days
4.3
DO45297
0 years, female, NA, stage:4, dead, 1260 days
3.5
Show allShow less
LIVER HEPATOCELLULAR CARCINOMA - Protein relative expression (CPTAC)
Number of samples
330
Samples
Sample ID
Sample type
nRPX
745
Tumor
2.0
627
Tumor
1.4
525
Tumor
1.4
727
Tumor
1.3
1027
Tumor
1.3
863
Tumor
1.2
823
Tumor
1.1
883
Tumor
1.1
361
Tumor
1.1
1025
Tumor
1.0
925
Tumor
1.0
1021
Tumor
1.0
435
Tumor
0.9
515
Tumor
0.9
685
Tumor
0.9
915
Tumor
0.9
271
Tumor
0.9
615
Tumor
0.9
443
Tumor
0.8
741
Tumor
0.8
737
Tumor
0.8
567
Tumor
0.8
427
Tumor
0.8
777
Tumor
0.8
135
Tumor
0.7
873
Tumor
0.7
517
Tumor
0.7
815
Tumor
0.7
857
Tumor
0.7
867
Tumor
0.7
227
Tumor
0.7
147
Tumor
0.7
663
Tumor
0.7
131
Tumor
0.7
483
Tumor
0.7
481
Tumor
0.7
721
Tumor
0.7
641
Tumor
0.7
911
Tumor
0.6
455
Tumor
0.6
471
Tumor
0.6
425
Tumor
0.6
553
Tumor
0.6
571
Tumor
0.6
393
Tumor
0.6
411
Tumor
0.6
257
Tumor
0.5
713
Tumor
0.5
473
Tumor
0.5
487
Tumor
0.5
421
Tumor
0.5
365
Tumor
0.5
137
Tumor
0.5
445
Tumor
0.5
1043
Tumor
0.5
527
Tumor
0.5
877
Tumor
0.5
535
Tumor
0.4
953
Tumor
0.4
523
Tumor
0.4
145
Tumor
0.4
223
Tumor
0.4
921
Tumor
0.4
513
Tumor
0.4
785
Tumor
0.4
977
Tumor
0.4
1041
Tumor
0.4
1015
Tumor
0.4
697
Tumor
0.4
297
Tumor
0.4
813
Tumor
0.4
533
Tumor
0.3
357
Tumor
0.3
477
Tumor
0.3
461
Tumor
0.3
695
Tumor
0.3
881
Tumor
0.3
963
Tumor
0.3
327
Tumor
0.3
851
Tumor
0.3
715
Tumor
0.3
557
Tumor
0.3
865
Tumor
0.3
981
Tumor
0.3
451
Tumor
0.2
724
Normal
0.2
1013
Tumor
0.2
861
Tumor
0.2
573
Tumor
0.2
341
Tumor
0.2
635
Tumor
0.2
331
Tumor
0.2
383
Tumor
0.1
558
Normal
0.1
113
Tumor
0.1
617
Tumor
0.1
923
Tumor
0.1
433
Tumor
0.1
415
Tumor
0.1
537
Tumor
0.1
416
Normal
0.1
665
Tumor
0.1
564
Normal
0.1
313
Tumor
0.1
497
Tumor
0.1
261
Tumor
0.1
817
Tumor
0.1
868
Normal
0.1
1045
Tumor
0.1
191
Tumor
0.1
431
Tumor
0.0
187
Tumor
0.0
728
Normal
0.0
951
Tumor
0.0
355
Tumor
0.0
387
Tumor
0.0
491
Tumor
0.0
955
Tumor
0.0
221
Tumor
0.0
125
Tumor
0.0
1031
Tumor
0.0
756
Normal
0.0
277
Tumor
0.0
874
Normal
0.0
328
Normal
0.0
545
Tumor
0.0
231
Tumor
0.0
943
Tumor
-0.1
862
Normal
-0.1
884
Normal
-0.1
978
Normal
-0.1
975
Tumor
-0.1
864
Normal
-0.1
568
Normal
-0.1
574
Normal
-0.1
127
Tumor
-0.1
161
Tumor
-0.1
746
Normal
-0.1
563
Tumor
-0.1
424
Normal
-0.1
232
Normal
-0.1
493
Tumor
-0.1
814
Normal
-0.1
447
Tumor
-0.1
738
Normal
-0.1
572
Normal
-0.2
983
Tumor
-0.2
463
Tumor
-0.2
852
Normal
-0.2
956
Normal
-0.2
965
Tumor
-0.2
944
Normal
-0.2
467
Tumor
-0.2
755
Tumor
-0.2
428
Normal
-0.2
132
Normal
-0.2
957
Tumor
-0.2
136
Normal
-0.2
436
Normal
-0.2
343
Tumor
-0.2
882
Normal
-0.2
1032
Normal
-0.2
918
Normal
-0.2
112
Tumor
-0.2
1016
Normal
-0.2
866
Normal
-0.2
356
Normal
-0.2
363
Tumor
-0.2
262
Normal
-0.2
723
Tumor
-0.2
786
Normal
-0.3
423
Tumor
-0.3
636
Normal
-0.3
526
Normal
-0.3
312
Normal
-0.3
914
Normal
-0.3
1022
Normal
-0.3
414
Normal
-0.3
314
Normal
-0.3
126
Normal
-0.3
212
Normal
-0.3
214
Normal
-0.3
222
Normal
-0.3
422
Normal
-0.3
272
Normal
-0.3
922
Normal
-0.3
213
Tumor
-0.3
278
Normal
-0.3
142
Normal
-0.3
742
Normal
-0.3
722
Normal
-0.3
1028
Normal
-0.3
285
Tumor
-0.3
367
Tumor
-0.3
426
Normal
-0.3
824
Normal
-0.3
196
Normal
-0.3
146
Normal
-0.3
298
Normal
-0.3
482
Normal
-0.3
412
Normal
-0.3
1026
Normal
-0.3
228
Normal
-0.3
114
Normal
-0.3
912
Normal
-0.3
926
Normal
-0.4
514
Normal
-0.4
744
Normal
-0.4
778
Normal
-0.4
385
Tumor
-0.4
446
Normal
-0.4
138
Normal
-0.4
464
Normal
-0.4
494
Normal
-0.4
938
Normal
-0.4
952
Normal
-0.4
267
Tumor
-0.4
696
Normal
-0.4
258
Normal
-0.4
466
Normal
-0.4
714
Normal
-0.4
111
Normal
-0.4
534
Normal
-0.4
968
Normal
-0.4
816
Normal
-0.4
518
Normal
-0.4
188
Normal
-0.4
1042
Normal
-0.4
162
Normal
-0.4
488
Normal
-0.4
375
Tumor
-0.4
698
Normal
-0.4
984
Normal
-0.4
1014
Normal
-0.4
286
Normal
-0.4
332
Normal
-0.4
916
Normal
-0.4
432
Normal
-0.4
468
Normal
-0.4
141
Tumor
-0.4
516
Normal
-0.4
528
Normal
-0.4
283
Tumor
-0.4
474
Normal
-0.4
364
Normal
-0.4
172
Normal
-0.4
128
Normal
-0.5
982
Normal
-0.5
664
Normal
-0.5
524
Normal
-0.5
434
Normal
-0.5
462
Normal
-0.5
351
Tumor
-0.5
642
Normal
-0.5
452
Normal
-0.5
618
Normal
-0.5
818
Normal
-0.5
185
Tumor
-0.5
546
Normal
-0.5
413
Tumor
-0.5
858
Normal
-0.5
284
Normal
-0.5
368
Normal
-0.5
388
Normal
-0.5
394
Normal
-0.5
171
Tumor
-0.5
268
Normal
-0.5
392
Normal
-0.5
672
Normal
-0.5
186
Normal
-0.5
966
Normal
-0.6
148
Normal
-0.6
195
Tumor
-0.6
472
Normal
-0.6
536
Normal
-0.6
616
Normal
-0.6
362
Normal
-0.6
444
Normal
-0.6
218
Normal
-0.6
648
Normal
-0.6
716
Normal
-0.6
686
Normal
-0.6
647
Tumor
-0.6
964
Normal
-0.6
366
Normal
-0.6
743
Tumor
-0.6
924
Normal
-0.6
628
Normal
-0.6
456
Normal
-0.6
1046
Normal
-0.6
448
Normal
-0.6
192
Normal
-0.6
224
Normal
-0.6
498
Normal
-0.6
352
Normal
-0.6
465
Tumor
-0.6
954
Normal
-0.7
395
Tumor
-0.7
344
Normal
-0.7
554
Normal
-0.7
478
Normal
-0.7
492
Normal
-0.7
376
Normal
-0.7
353
Tumor
-0.7
217
Tumor
-0.7
484
Normal
-0.7
878
Normal
-0.7
384
Normal
-0.7
671
Tumor
-0.7
913
Tumor
-0.7
662
Normal
-0.7
937
Tumor
-0.7
396
Normal
-0.7
386
Normal
-0.8
124
Normal
-0.8
123
Tumor
-0.8
311
Tumor
-0.8
958
Normal
-0.8
538
Normal
-0.8
358
Normal
-0.8
342
Normal
-0.8
1044
Normal
-0.8
976
Normal
-0.8
666
Normal
-0.9
354
Normal
-0.9
211
Tumor
-0.9
391
Tumor
-1.1
917
Tumor
-1.1
661
Tumor
-1.3
967
Tumor
-2.0
Show allShow less
LIVER CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
