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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
189.4
nTPM
HPA Brain:
264.7
nTPM
GTEx:
189.4
nTPM
FANTOM5:
94.4
Scaled Tags Per Million
Pig:
147.2
nTPM
Mouse:
287.8
nTPM
Allen mouse:
12.1
Expression energy
MIDBRAIN - HPA Brain RNA-seq
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
264.7
Sample id
Sample description
nTPM
Cuneiform nucleus nTPM: 208.3
2586
Male, age 75, left hemisphere
307.2
2666
Male, age 74, left hemisphere
267.6
2828
Female, age 72, unknown
230.8
1827
Male, age 72, unknown
215.1
2019
Male, age 18, unknown
195.6
2411
Female, age 72, unknown
193.0
2219
Male, age 76, both hemispheres
192.0
1870
Female, age 42, unknown
170.8
1833
Male, age 53, unknown
158.5
1830
Male, age 51, unknown
151.9
Dorsal raphe nucleus nTPM: 214.3
2047
Male, age 72, unknown
242.7
1828
Male, age 53, unknown
232.8
2298
Female, age 72, unknown
225.7
2750
Male, age 76, both hemispheres
187.2
2016
Female, age 72, unknown
183.0
Inferior colliculus nTPM: 177.1
2097
Female, age 72, unknown
205.4
1890
Male, age 53, unknown
185.4
1848
Female, age 42, unknown
165.4
2849
Male, age 72, unknown
152.4
Median raphe nucleus nTPM: 191.8
2220
Male, age 76, midline
191.8
Periaquaductal grey, anterior nTPM: 264.1
1947
Male, age 18, unknown
293.5
1795
Male, age 51, unknown
270.9
2502
Female, age 75, unknown
227.8
Periaquaductal grey, dorsal nTPM: 154.8
1840
Male, age 53, unknown
171.0
2464
Female, age 72, unknown
162.8
1831
Male, age 72, unknown
150.7
2850
Male, age 76, both hemispheres
134.9
Periaquaductal grey, lateral nTPM: 154.1
2053
Male, age 18, unknown
164.0
2272
Male, age 74, both hemispheres
160.8
2140
Male, age 76, both hemispheres
137.5
Pretectal area nTPM: 201.7
2007
Male, age 72, unknown
266.4
1816
Male, age 51, unknown
262.1
1817
Female, age 42, unknown
231.8
1944
Female, age 72, unknown
217.3
2667
Female, age 75, unknown
207.2
1815
Male, age 53, unknown
200.4
2224
Female, age 72, unknown
177.7
2825
Male, age 18, unknown
176.8
2407
Male, age 75, both hemispheres
168.9
2273
Male, age 74, both hemispheres
168.6
2316
Male, age 76, right hemisphere
141.2
Red nucleus nTPM: 196.7
2588
Male, age 74, left hemisphere
243.8
2503
Female, age 72, unknown
235.0
1821
Female, age 72, unknown
221.7
2725
Female, age 75, unknown
199.7
2769
Male, age 72, unknown
198.7
2227
Male, age 72, unknown
195.9
2785
Male, age 18, unknown
190.6
2584
Male, age 75, left hemisphere
185.9
1954
Female, age 42, unknown
183.1
1904
Male, age 53, unknown
178.1
1865
Male, age 51, unknown
169.9
2823
Male, age 76, right hemisphere
157.3
Substantia nigra nTPM: 264.7
1916
Female, age 42, unknown
391.6
1851
Male, age 51, unknown
321.4
2665
Male, age 74, both hemispheres
301.6
1941
Male, age 53, unknown
298.2
2241
Male, age 72, unknown
248.5
1889
Female, age 72, unknown
232.8
2590
Female, age 75, unknown
221.2
2583
Male, age 75, right hemisphere
217.6
2699
Male, age 18, unknown
213.1
2409
Female, age 72, unknown
201.5
Superior colliculus nTPM: 190.7
2668
Female, age 75, unknown
236.0
2261
Male, age 18, unknown
227.4
2664
Male, age 75, both hemispheres
223.0
1796
Male, age 53, unknown
222.1
2087
Female, age 72, unknown
207.9
2587
Male, age 74, left hemisphere
195.1
1839
Male, age 51, unknown
167.6
1913
Female, age 42, unknown
147.4
1895
Male, age 76, right hemisphere
141.4
1995
Male, age 72, unknown
139.0
Ventral tegmental area nTPM: 225.0
1915
Female, age 42, unknown
273.9
2410
Female, age 72, unknown
256.5
2218
Male, age 76, both hemispheres
234.9
1942
Male, age 51, unknown
225.0
2223
Female, age 72, unknown
182.7
2021
Male, age 53, unknown
176.7
MIDBRAIN - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
189.4
GTEx sample id
Sample description
nTPM
Brain - Substantia nigra Average nTPM: 189.4
Samples: 139
Max nTPM: 324.2
Min nTPM: 100.2
Std nTPM: 47.0
Median nTPM: 181.6
GTEX-1H3VE-0011-R2a-SM-CE6SA
40-49 years, male
324.2
GTEX-12ZZX-0011-R2a-SM-5EGLG
40-49 years, female
313.9
GTEX-17HG3-0011-R2a-SM-7MGVX
30-39 years, female
308.1
GTEX-1H1ZS-0011-R2b-SM-CL54Q
70-79 years, male
302.9
GTEX-1GZ2Q-0011-R2b-SM-9OSWO
40-49 years, male
290.1
GTEX-13O3Q-0011-R2b-SM-5KM3K
50-59 years, male
289.2
GTEX-1IGQW-0011-R2b-SM-D4P26
60-69 years, male
288.2
GTEX-11PRG-0011-R2a-SM-69LQ5
50-59 years, male
282.4
GTEX-Z93S-0011-R2a-SM-4RGNG
50-59 years, male
281.9
GTEX-15ER7-0011-R2a-SM-6M46O
20-29 years, female
269.9
GTEX-ZV68-0011-R2a-SM-4YCDK
50-59 years, female
264.1
GTEX-1C6VR-0011-R2a-SM-7RHGZ
60-69 years, male
258.8
GTEX-12WSD-0011-R2a-SM-5LZWB
60-69 years, female
256.2
GTEX-1B8L1-0011-R2a-SM-9OSVL
60-69 years, male
256.2
GTEX-1LVAO-0011-R2a-SM-EYYX1
60-69 years, male
252.9
GTEX-1313W-0011-R2a-SM-5EGLF
50-59 years, female
251.0
GTEX-12WSA-0011-R2a-SM-57WDK
60-69 years, male
248.1
GTEX-1J1OQ-0011-R2b-SM-ARU88
40-49 years, female
244.1
GTEX-YJ89-0011-R2b-SM-4RGLT
60-69 years, male
243.7
GTEX-1H23P-0011-R2a-SM-CKZP3
60-69 years, male
243.6
GTEX-13SLW-0011-R2b-SM-5O9C6
70-79 years, male
241.9
GTEX-1LVA9-0011-R2a-SM-EZ6MJ
50-59 years, male
241.8
GTEX-13CF2-0011-R2a-SM-5L3DC
60-69 years, male
239.9
GTEX-1H3O1-0011-R2b-SM-CKZOT
60-69 years, male
239.4
GTEX-1GN2E-0011-R2a-SM-9WG7D
60-69 years, male
239.2
GTEX-T6MN-0011-R2A-SM-32QOW
50-59 years, male
225.1
GTEX-11EMC-0011-R2b-SM-DO114
60-69 years, female
224.5
GTEX-1GN1U-0011-R2a-SM-CL53A
50-59 years, female
222.7
GTEX-1I1GS-0011-R2b-SM-CMKHG
60-69 years, male
220.8
GTEX-1LB8K-0011-R2a-SM-EZ6MQ
50-59 years, male
220.2
GTEX-ZE9C-0011-R2a-SM-4WKGH
60-69 years, male
220.0
GTEX-13X6K-0011-R2b-SM-5P9K3
60-69 years, female
219.8
GTEX-1RLM8-0011-R2a-SM-EZ6N4
50-59 years, male
219.6
GTEX-13NYB-0011-R2a-SM-5MR3C
40-49 years, male
219.5
GTEX-1399T-0011-R2b-SM-5DUXM
60-69 years, male
217.8
GTEX-14C5O-0011-R2a-SM-5ZZV2
60-69 years, male
213.1
GTEX-15EO6-0011-R2a-SM-6M46R
50-59 years, male
211.6
GTEX-ZDXO-0011-R2b-SM-4WKFG
60-69 years, male
211.4
GTEX-11GSP-0011-R2b-SM-9QEGE
60-69 years, female
211.1
GTEX-1HR98-0011-R2a-SM-ARL7A
60-69 years, male
210.5
GTEX-18464-0011-R2a-SM-731AL
50-59 years, male
208.4
GTEX-13OVJ-0011-R2b-SM-5L3GP
50-59 years, female
208.3
GTEX-14BIM-0011-R2b-SM-69LQ6
60-69 years, female
208.1
GTEX-13OW6-0011-R2a-SM-5L3HG
50-59 years, male
208.0
GTEX-1EKGG-0011-R2a-SM-CE6R8
60-69 years, male
207.4
GTEX-1GMR8-0011-R2a-SM-CE6RD
50-59 years, female
203.1
GTEX-132Q8-0011-R2b-SM-5EQ5Z
60-69 years, male
200.6
GTEX-131XH-0011-R2b-SM-5DUVY
50-59 years, male
199.9
GTEX-14PJO-0011-R2a-SM-5ZZVF
60-69 years, male
199.9
GTEX-1B8SG-0011-R2b-SM-79OOT
50-59 years, male
199.3
GTEX-139TS-0011-R2b-SM-5J1MX
60-69 years, male
199.1
GTEX-13NYS-0011-R2b-SM-5MR4G
60-69 years, male
199.1
GTEX-13O3O-0011-R2b-SM-5P9H1
60-69 years, female
198.9
GTEX-N7MS-0011-R2a-SM-2HML6
60-69 years, male
198.4
GTEX-12WSH-0011-R2a-SM-5GU68
50-59 years, male
198.2
GTEX-1F75B-0011-R2a-SM-ARL8I
50-59 years, male
198.2
GTEX-1JMQK-0011-R2a-SM-EYYXQ
60-69 years, male
197.9
GTEX-13SLX-0011-R2b-SM-5S2VP
50-59 years, female
196.9
GTEX-1IL2U-0011-R2a-SM-ARU6V
60-69 years, male
193.6
GTEX-T2IS-0011-R2A-SM-32QPF
20-29 years, female
192.3
GTEX-1HT8W-0011-R2a-SM-CMKH9
30-39 years, male
190.7
GTEX-13OW8-0011-R2a-SM-5L3G2
60-69 years, male
188.9
GTEX-1HB9E-0011-R2b-SM-A96RW
50-59 years, male
188.3
GTEX-14ASI-0011-R2b-SM-5YY9H
60-69 years, male
188.2
GTEX-OXRO-0011-R2A-SM-3NB1W
60-69 years, female
188.2
GTEX-1B933-0011-R2b-SM-7IGNM
50-59 years, female
186.9
GTEX-1E1VI-0011-R2a-SM-9QEGS
50-59 years, male
185.7
GTEX-1LSNL-0011-R2a-SM-EZ6MK
50-59 years, male
185.4
GTEX-1EMGI-0011-R2b-SM-9OSVS
60-69 years, male
183.1
GTEX-145LS-0011-R2a-SM-5PNZI
60-69 years, female
181.6
GTEX-13N2G-0011-R2a-SM-5MR4Q
60-69 years, male
180.5
GTEX-1GN73-0011-R2a-SM-CJI2V
60-69 years, male
179.9
GTEX-XMD1-0011-R2B-SM-4AT5N
60-69 years, male
179.7
GTEX-1F6I4-0011-R2a-SM-CL536
60-69 years, male
179.6
GTEX-14JG1-0011-R2a-SM-5ZZVE
40-49 years, male
178.8
GTEX-1F48J-0011-R2a-SM-CL535
50-59 years, female
178.7
GTEX-1IY9M-0011-R2a-SM-D4P29
60-69 years, male
178.0
GTEX-X585-0011-R2B-SM-46MVF
50-59 years, male
176.2
GTEX-1A3MX-0011-R2b-SM-7EWFL
60-69 years, male
175.2
GTEX-1A8G7-0011-R2a-SM-7IGQI
60-69 years, male
173.6
GTEX-1GTWX-0011-R2b-SM-ADEH5
60-69 years, male
172.6
GTEX-1IKOH-0011-R2a-SM-CMKHO
60-69 years, female
171.9
GTEX-R55E-0011-R2A-SM-EYYV9
20-29 years, male
171.5
GTEX-15CHQ-0011-R2b-SM-6AJAD
60-69 years, male
171.4
GTEX-13G51-0011-R2b-SM-5LZXS
60-69 years, male
171.1
GTEX-T5JC-0011-R2A-SM-32PLZ
20-29 years, male
170.1
GTEX-11GSO-0011-R2a-SM-57WDF
60-69 years, male
169.5
GTEX-13X6I-0011-R2b-SM-5PNWQ
60-69 years, male
169.0
GTEX-13RTJ-0011-R2a-SM-5PNW9
60-69 years, male
168.1
GTEX-WHSE-0011-R2A-SM-3P5ZL
20-29 years, male
168.0
GTEX-QMR6-0011-R2A-SM-32PKV
50-59 years, male
165.2
GTEX-1H1DG-0011-R2a-SM-ADEIQ
70-79 years, male
164.2
GTEX-OHPN-0011-R2A-SM-2I5FB
60-69 years, female
164.0
GTEX-XLM4-0011-R2B-SM-4AT5Z
60-69 years, male
163.6
GTEX-S7SE-0011-R2A-SM-2XCDC
50-59 years, male
162.8
GTEX-Q2AG-0011-R2A-SM-2HMIT
40-49 years, female
162.6
GTEX-11GS4-0011-R2a-SM-DO942
60-69 years, male
161.6
GTEX-15RJE-0011-R2b-SM-79OMP
40-49 years, male
161.4
GTEX-PWO3-0011-R2A-SM-2S1OX
60-69 years, female
160.3
GTEX-11TUW-0011-R2b-SM-DO92T
60-69 years, male
159.7
GTEX-11DZ1-0011-R2a-SM-DNZZM
50-59 years, male
158.6
GTEX-1F6IF-0011-R2b-SM-9QEHB
60-69 years, male
157.9
GTEX-11WQC-0011-R2a-SM-DO927
60-69 years, male
157.7
GTEX-1CB4G-0011-R2a-SM-9QEGQ
60-69 years, male
157.6
GTEX-1B996-0011-R2a-SM-7IGON
60-69 years, male
157.2
GTEX-1EU9M-0011-R2b-SM-9QEH7
60-69 years, male
157.2
GTEX-14PN4-0011-R2a-SM-6EU2Y
50-59 years, male
156.6
GTEX-NPJ7-0011-R2a-SM-2I3GF
60-69 years, female
156.6
GTEX-13QJC-0011-R2b-SM-5PNUN
60-69 years, female
155.9
GTEX-1HFI6-0011-R2a-SM-CMKH5
40-49 years, male
153.2
GTEX-1J8Q2-0011-R2b-SM-EAZ2X
60-69 years, male
153.1
GTEX-11UD1-0011-R2b-SM-5BC6O
40-49 years, female
152.8
GTEX-17EVP-0011-R2a-SM-7LG4W
40-49 years, male
151.3
GTEX-16Z82-0011-R2b-SM-79OK9
60-69 years, male
149.3
GTEX-1I1CD-0011-R2a-SM-CM2T3
60-69 years, female
148.4
GTEX-13FXS-0011-R2b-SM-5K7XX
50-59 years, male
146.7
GTEX-1LH75-0011-R2b-SM-EYYWQ
50-59 years, female
145.7
GTEX-NPJ8-0011-R2a-SM-2TC6M
40-49 years, male
144.7
GTEX-P44G-0011-R2A-SM-2XCD2
30-39 years, male
144.1
GTEX-13PDP-0011-R2b-SM-5O9DH
60-69 years, male
142.8
GTEX-1MA7X-0011-R2b-SM-EZ6MT
60-69 years, male
142.7
GTEX-11ZTS-0011-R2b-SM-5BC75
60-69 years, female
139.5
GTEX-1IKJJ-0011-R2b-SM-ARZLJ
60-69 years, male
139.4
GTEX-15DCD-0011-R2b-SM-6LPIE
70-79 years, female
138.7
GTEX-1445S-0011-R2b-SM-5PNUH
60-69 years, male
136.7
GTEX-15DYW-0011-R2b-SM-7KUKY
60-69 years, female
133.8
GTEX-14BIN-0011-R2a-SM-5S2RJ
50-59 years, female
129.8
GTEX-1I1GV-0011-R2a-SM-ARZLF
60-69 years, male
128.4
GTEX-UTHO-0011-R2A-SM-3GIKC
60-69 years, male
128.2
GTEX-147GR-0011-R2b-SM-5S2RQ
60-69 years, male
128.0
GTEX-ZAB4-0011-R2a-SM-4RGNP
40-49 years, male
127.1
GTEX-12WSF-0011-R2a-SM-5DUVU
70-79 years, male
123.7
GTEX-QDT8-0011-R2A-SM-32PKQ
30-39 years, female
123.6
GTEX-RU72-0011-R2A-SM-2TF6O
50-59 years, female
113.6
GTEX-X4XX-0011-R2A-SM-3P623
60-69 years, male
106.6
GTEX-1HSMO-0011-R2a-SM-CL553
60-69 years, male
106.2
GTEX-NL4W-0011-R2a-SM-2I5GV
50-59 years, male
104.5
GTEX-N7MT-0011-R2a-SM-2I3GI
60-69 years, female
103.2
GTEX-YFC4-0011-R2a-SM-4V6DZ
40-49 years, female
100.2
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MIDBRAIN - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
287.8
Mouse sample
Sample description
nTPM
Midbrain nTPM: 287.8
Samples: 4
Max nTPM: 321.6
Min nTPM: 273.5
Sample A
Male
321.6
Sample B
Male
276.4
Sample C
Female
279.7
Sample D
Female
273.5
MIDBRAIN - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
Max subtype Expression energyi
Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.